BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035713
(491 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 169/372 (45%), Gaps = 79/372 (21%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+F ++K +G G G V +V+++ T +AMK+++K + R + + ER++L D
Sbjct: 91 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 150
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
++ L+ F+ + LVM++ GG+L +L K +K ED ARF+ E++LA++ +H
Sbjct: 151 WITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQ 209
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILNDE 274
L V+RD+KP+NVL+ GHI L+DF L+ +ND+
Sbjct: 210 LHYVHRDIKPDNVLLDVNGHIRLADFGSCLK-------------------------MNDD 244
Query: 275 YAVHGCM---QPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
V + P P IL + ++ K +GP
Sbjct: 245 GTVQSSVAVGTPDYISPEILQAMEDGMGK--YGP-------------------------- 276
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF---PET 388
DWW+ G+ +YE+L+G TPF + T ++ RF
Sbjct: 277 --------------ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHV 322
Query: 389 PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE---P 445
VS A+DLI+ L+ +R + G + K+H FFEG+NW +R+ P+IP+ P
Sbjct: 323 TDVSEEAKDLIQRLIC--SRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSP 380
Query: 446 VDFSVFAGKDQA 457
D S F D
Sbjct: 381 SDTSNFDVDDDV 392
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 169/372 (45%), Gaps = 79/372 (21%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+F ++K +G G G V +V+++ T +AMK+++K + R + + ER++L D
Sbjct: 75 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 134
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
++ L+ F+ + LVM++ GG+L +L K +K ED ARF+ E++LA++ +H
Sbjct: 135 WITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQ 193
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILNDE 274
L V+RD+KP+NVL+ GHI L+DF L+ +ND+
Sbjct: 194 LHYVHRDIKPDNVLLDVNGHIRLADFGSCLK-------------------------MNDD 228
Query: 275 YAVHGCM---QPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
V + P P IL + ++ K +GP
Sbjct: 229 GTVQSSVAVGTPDYISPEILQAMEDGMGK--YGP-------------------------- 260
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF---PET 388
DWW+ G+ +YE+L+G TPF + T ++ RF
Sbjct: 261 --------------ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHV 306
Query: 389 PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE---P 445
VS A+DLI+ L+ +R + G + K+H FFEG+NW +R+ P+IP+ P
Sbjct: 307 TDVSEEAKDLIQRLIC--SRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSP 364
Query: 446 VDFSVFAGKDQA 457
D S F D
Sbjct: 365 SDTSNFDVDDDV 376
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 150/353 (42%), Gaps = 80/353 (22%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+F+ K LG G +V L T+ +A+K+++K + NK+ ER+++ LDHP
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
F LY F+ D+ + + G L L+ + F E RF+ +E++ ALEYLH
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILNDE 274
GI++RDLKPEN+L+ ++ HI ++DF +
Sbjct: 152 KGIIHRDLKPENILLNEDMHIQITDFGTA------------------------------- 180
Query: 275 YAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLA 334
++L + + + F PEL+ E + +S
Sbjct: 181 --------------KVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS---------- 216
Query: 335 PEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFN-VVGQPLRFPET--PQV 391
D W G +Y+L+ G PF+ GN +F ++ FPE P+
Sbjct: 217 -------------DLWALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLEYDFPEKFFPK- 261
Query: 392 SFVARDLIRGLLVKEPHKRIAYK--RGATEIKQHPFFEGVNWALVRSALPPHI 442
ARDL+ LLV + KR+ + G +K HPFFE V W + PP +
Sbjct: 262 ---ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 311
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 150/354 (42%), Gaps = 80/354 (22%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+F+ K LG G +V L T+ +A+K+++K + NK+ ER+++ LDH
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
PF LY F+ D+ + + G L L+ + F E RF+ +E++ ALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLH 146
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILND 273
GI++RDLKPEN+L+ ++ HI ++DF +
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTA------------------------------ 176
Query: 274 EYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYL 333
++L + + + F PEL+ E + +S
Sbjct: 177 ---------------KVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS--------- 212
Query: 334 APEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFN-VVGQPLRFPET--PQ 390
D W G +Y+L+ G PF+ GN +F ++ FPE P+
Sbjct: 213 --------------DLWALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLEYDFPEKFFPK 257
Query: 391 VSFVARDLIRGLLVKEPHKRIAYK--RGATEIKQHPFFEGVNWALVRSALPPHI 442
ARDL+ LLV + KR+ + G +K HPFFE V W + PP +
Sbjct: 258 ----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 307
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 150/354 (42%), Gaps = 80/354 (22%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+F+ K LG G +V L T+ +A+K+++K + NK+ ER+++ LDH
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
PF LY F+ D+ + + G L L+ + F E RF+ +E++ ALEYLH
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLH 131
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILND 273
GI++RDLKPEN+L+ ++ HI ++DF +
Sbjct: 132 GKGIIHRDLKPENILLNEDMHIQITDFGTA------------------------------ 161
Query: 274 EYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYL 333
++L + + + F PEL+ E + +S
Sbjct: 162 ---------------KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS--------- 197
Query: 334 APEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFN-VVGQPLRFPET--PQ 390
D W G +Y+L+ G PF+ GN +F ++ FPE P+
Sbjct: 198 --------------DLWALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLEYDFPEKFFPK 242
Query: 391 VSFVARDLIRGLLVKEPHKRIAYK--RGATEIKQHPFFEGVNWALVRSALPPHI 442
ARDL+ LLV + KR+ + G +K HPFFE V W + PP +
Sbjct: 243 ----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 292
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 106/153 (69%), Gaps = 6/153 (3%)
Query: 94 SNFRLLKRLGYGDIGSVYLVE-LRGTNT--YFAMKVMDKASLASRNKLLRAQTEREILGL 150
S F LLK LG G G V+LV+ + G++ +AMKV+ KA+L R+++ R + ER+IL
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVE 82
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
++HPF+ L+ F+T+ L+++F GG+L + K+ FTE+ +F+ +E+ LAL+
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALD 140
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+LH LGI+YRDLKPEN+L+ +EGHI L+DF LS
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 74/127 (58%), Gaps = 9/127 (7%)
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ 381
++ SF GT EY+APE++ GH + DWW+FG+ ++E+L GT PF+G+ + T+ ++
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 382 PLRFPE--TPQVSFVARDLIRGLLVKEPHKRI-AYKRGATEIKQHPFFEGVNWALV--RS 436
L P+ +P+ A+ L+R L + P R+ A G EIK+H FF ++W + R
Sbjct: 242 KLGMPQFLSPE----AQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRRE 297
Query: 437 ALPPHIP 443
PP P
Sbjct: 298 IHPPFKP 304
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 106/153 (69%), Gaps = 6/153 (3%)
Query: 94 SNFRLLKRLGYGDIGSVYLVE-LRGTNT--YFAMKVMDKASLASRNKLLRAQTEREILGL 150
S F LLK LG G G V+LV+ + G++ +AMKV+ KA+L R+++ R + ER+IL
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVE 83
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
++HPF+ L+ F+T+ L+++F GG+L + K+ FTE+ +F+ +E+ LAL+
Sbjct: 84 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALD 141
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+LH LGI+YRDLKPEN+L+ +EGHI L+DF LS
Sbjct: 142 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 174
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 74/127 (58%), Gaps = 9/127 (7%)
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ 381
++ SF GT EY+APE++ GH + DWW+FG+ ++E+L GT PF+G+ + T+ ++
Sbjct: 183 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 242
Query: 382 PLRFPE--TPQVSFVARDLIRGLLVKEPHKRI-AYKRGATEIKQHPFFEGVNWALV--RS 436
L P+ +P+ A+ L+R L + P R+ A G EIK+H FF ++W + R
Sbjct: 243 KLGMPQFLSPE----AQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRRE 298
Query: 437 ALPPHIP 443
PP P
Sbjct: 299 IHPPFKP 305
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 106/153 (69%), Gaps = 6/153 (3%)
Query: 94 SNFRLLKRLGYGDIGSVYLVE-LRGTNT--YFAMKVMDKASLASRNKLLRAQTEREILGL 150
S F LLK LG G G V+LV+ + G++ +AMKV+ KA+L R+++ R + ER+IL
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVE 82
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
++HPF+ L+ F+T+ L+++F GG+L + K+ FTE+ +F+ +E+ LAL+
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALD 140
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+LH LGI+YRDLKPEN+L+ +EGHI L+DF LS
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 5/125 (4%)
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ 381
++ SF GT EY+APE++ GH + DWW+FG+ ++E+L GT PF+G+ + T+ ++
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 382 PLRFPETPQVSFVARDLIRGLLVKEPHKRI-AYKRGATEIKQHPFFEGVNWALV--RSAL 438
L P+ +S A+ L+R L + P R+ A G EIK+H FF ++W + R
Sbjct: 242 KLGMPQF--LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIH 299
Query: 439 PPHIP 443
PP P
Sbjct: 300 PPFKP 304
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 150/354 (42%), Gaps = 80/354 (22%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+F+ K LG G +V L T+ +A+K+++K + NK+ ER+++ LDH
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
PF LY F+ D+ + + G L L+ + F E RF+ +E++ ALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLH 146
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILND 273
GI++RDLKPEN+L+ ++ HI ++DF +
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTA------------------------------ 176
Query: 274 EYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYL 333
++L + + + F PEL+ E + +S
Sbjct: 177 ---------------KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS--------- 212
Query: 334 APEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFN-VVGQPLRFPET--PQ 390
D W G +Y+L+ G PF+ GN +F ++ FPE P+
Sbjct: 213 --------------DLWALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLEYDFPEKFFPK 257
Query: 391 VSFVARDLIRGLLVKEPHKRIAYK--RGATEIKQHPFFEGVNWALVRSALPPHI 442
ARDL+ LLV + KR+ + G +K HPFFE V W + PP +
Sbjct: 258 ----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 307
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 149/354 (42%), Gaps = 80/354 (22%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+F+ K LG G +V L T+ +A+K+++K + NK+ ER+++ LDH
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
PF LY F+ D+ + + G L L+ + F E RF+ +E++ ALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILND 273
GI++RDLKPEN+L+ ++ HI ++DF +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTA------------------------------ 177
Query: 274 EYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYL 333
++L + + + F PEL+ E + +S
Sbjct: 178 ---------------KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDL------- 215
Query: 334 APEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFN-VVGQPLRFPET--PQ 390
W G +Y+L+ G PF+ GN +F ++ FPE P+
Sbjct: 216 ----------------WALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLEYDFPEKFFPK 258
Query: 391 VSFVARDLIRGLLVKEPHKRIAYK--RGATEIKQHPFFEGVNWALVRSALPPHI 442
ARDL+ LLV + KR+ + G +K HPFFE V W + PP +
Sbjct: 259 ----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 149/354 (42%), Gaps = 80/354 (22%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+F+ K LG G +V L T+ +A+K+++K + NK+ ER+++ LDH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
PF LY F+ D+ + + G L L+ + F E RF+ +E++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILND 273
GI++RDLKPEN+L+ ++ HI ++DF +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTA------------------------------ 179
Query: 274 EYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYL 333
++L + + + F PEL+ E + +S
Sbjct: 180 ---------------KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDL------- 217
Query: 334 APEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFN-VVGQPLRFPET--PQ 390
W G +Y+L+ G PF+ GN +F ++ FPE P+
Sbjct: 218 ----------------WALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLEYDFPEKFFPK 260
Query: 391 VSFVARDLIRGLLVKEPHKRIAYK--RGATEIKQHPFFEGVNWALVRSALPPHI 442
ARDL+ LLV + KR+ + G +K HPFFE V W + PP +
Sbjct: 261 ----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 149/354 (42%), Gaps = 80/354 (22%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+F+ K LG G +V L T+ +A+K+++K + NK+ ER+++ LDH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
PF LY F+ D+ + + G L L+ + F E RF+ +E++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILND 273
GI++RDLKPEN+L+ ++ HI ++DF +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTA------------------------------ 179
Query: 274 EYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYL 333
++L + + + F PEL+ E + +S
Sbjct: 180 ---------------KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDL------- 217
Query: 334 APEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFN-VVGQPLRFPET--PQ 390
W G +Y+L+ G PF+ GN +F ++ FPE P+
Sbjct: 218 ----------------WALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLEYDFPEKFFPK 260
Query: 391 VSFVARDLIRGLLVKEPHKRIAYK--RGATEIKQHPFFEGVNWALVRSALPPHI 442
ARDL+ LLV + KR+ + G +K HPFFE V W + PP +
Sbjct: 261 ----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 148/353 (41%), Gaps = 80/353 (22%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+F+ K LG G +V L T+ +A+K+++K + NK+ ER+++ LDHP
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
F LY F+ D+ + + G L L+ + F E RF+ +E++ ALEYLH
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 153
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILNDE 274
GI++RDLKPEN+L+ ++ HI ++DF +
Sbjct: 154 KGIIHRDLKPENILLNEDMHIQITDFGTA------------------------------- 182
Query: 275 YAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLA 334
++L + + + F PEL+ E + +S
Sbjct: 183 --------------KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDL-------- 220
Query: 335 PEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFN-VVGQPLRFPET--PQV 391
W G +Y+L+ G PF+ GN +F ++ FP P+
Sbjct: 221 ---------------WALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLEYDFPAAFFPK- 263
Query: 392 SFVARDLIRGLLVKEPHKRIAYK--RGATEIKQHPFFEGVNWALVRSALPPHI 442
ARDL+ LLV + KR+ + G +K HPFFE V W + PP +
Sbjct: 264 ---ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 313
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 102/153 (66%), Gaps = 6/153 (3%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELR---GTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
S+F LLK LG G G V+LV + +AMKV+ KA+L R+++ R + ER+IL
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRV-RTKMERDILAD 86
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
++HPF+ L+ F+T+ L+++F GG+L + K+ FTE+ +F+ +E+ L L+
Sbjct: 87 VNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALGLD 144
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+LH LGI+YRDLKPEN+L+ +EGHI L+DF LS
Sbjct: 145 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 177
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ 381
++ SF GT EY+APE++ +GH + DWW++G+ ++E+L G+ PF+G+ + T+ ++
Sbjct: 186 KAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKA 245
Query: 382 PLRFPETPQVSFVARDLIRGLLVKEPHKRIAYK-RGATEIKQHPFFEGVNW-ALVRSALP 439
L P+ +S A+ L+R L + P R+ GA EIK+H F+ ++W L R +
Sbjct: 246 KLGMPQF--LSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIK 303
Query: 440 P 440
P
Sbjct: 304 P 304
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 149/353 (42%), Gaps = 80/353 (22%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+F+ K LG G +V L T+ +A+K+++K + NK+ ER+++ LDHP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
F LY F+ D+ + + G L L+ + F E RF+ +E++ ALEYLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILNDE 274
GI++RDLKPEN+L+ ++ HI ++DF +
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTA------------------------------- 179
Query: 275 YAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLA 334
++L + + + F PEL+ E + +S
Sbjct: 180 --------------KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDL-------- 217
Query: 335 PEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLF-NVVGQPLRFPET--PQV 391
W G +Y+L+ G PF+ GN +F ++ FPE P+
Sbjct: 218 --------------W-ALGCIIYQLVAGLPPFRA-GNEGLIFAKIIKLEYDFPEKFFPK- 260
Query: 392 SFVARDLIRGLLVKEPHKRIAYK--RGATEIKQHPFFEGVNWALVRSALPPHI 442
ARDL+ LLV + KR+ + G +K HPFFE V W + PP +
Sbjct: 261 ---ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 149/354 (42%), Gaps = 80/354 (22%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+F+ K LG G +V L T+ +A+K+++K + NK+ ER+++ LDH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
PF LY F+ D+ + + G L L+ + F E RF+ +E++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILND 273
GI++RDLKPEN+L+ ++ HI ++DF +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTA------------------------------ 179
Query: 274 EYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYL 333
++L + + + F PEL+ E + +S
Sbjct: 180 ---------------KVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDL------- 217
Query: 334 APEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLF-NVVGQPLRFPET--PQ 390
W G +Y+L+ G PF+ GN +F ++ FPE P+
Sbjct: 218 ---------------W-ALGCIIYQLVAGLPPFRA-GNEGLIFAKIIKLEYDFPEKFFPK 260
Query: 391 VSFVARDLIRGLLVKEPHKRIAYK--RGATEIKQHPFFEGVNWALVRSALPPHI 442
ARDL+ LLV + KR+ + G +K HPFFE V W + PP +
Sbjct: 261 ----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 149/354 (42%), Gaps = 80/354 (22%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+F+ K LG G +V L T+ +A+K+++K + NK+ ER+++ LDH
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
PF LY F+ D+ + + G L L+ + F E RF+ +E++ ALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLH 150
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILND 273
GI++RDLKPEN+L+ ++ HI ++DF +
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTA------------------------------ 180
Query: 274 EYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYL 333
++L + + + F PEL+ E + +S
Sbjct: 181 ---------------KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDL------- 218
Query: 334 APEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFN-VVGQPLRFPET--PQ 390
W G +Y+L+ G PF+ GN +F ++ FPE P+
Sbjct: 219 ---------------W-ALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLEYDFPEKFFPK 261
Query: 391 VSFVARDLIRGLLVKEPHKRIAYK--RGATEIKQHPFFEGVNWALVRSALPPHI 442
ARDL+ LLV + KR+ + G +K HPFFE V W + PP +
Sbjct: 262 ----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 311
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 149/354 (42%), Gaps = 80/354 (22%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+F+ K LG G +V L T+ +A+K+++K + NK+ ER+++ LDH
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
PF LY F+ D+ + + G L L+ + F E RF+ +E++ ALEYLH
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLH 154
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILND 273
GI++RDLKPEN+L+ ++ HI ++DF +
Sbjct: 155 GKGIIHRDLKPENILLNEDMHIQITDFGTA------------------------------ 184
Query: 274 EYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYL 333
++L + + + F PEL+ E + +S
Sbjct: 185 ---------------KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDL------- 222
Query: 334 APEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFN-VVGQPLRFPET--PQ 390
W G +Y+L+ G PF+ GN +F ++ FPE P+
Sbjct: 223 ---------------W-ALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLEYDFPEKFFPK 265
Query: 391 VSFVARDLIRGLLVKEPHKRIAYK--RGATEIKQHPFFEGVNWALVRSALPPHI 442
ARDL+ LLV + KR+ + G +K HPFFE V W + PP +
Sbjct: 266 ----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 315
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 149/354 (42%), Gaps = 80/354 (22%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+F+ K LG G +V L T+ +A+K+++K + NK+ ER+++ LDH
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
PF LY F+ D+ + + G L L+ + F E RF+ +E++ ALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILND 273
GI++RDLKPEN+L+ ++ HI ++DF +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTA------------------------------ 177
Query: 274 EYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYL 333
++L + + + F PEL+ E + +S
Sbjct: 178 ---------------KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDL------- 215
Query: 334 APEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFN-VVGQPLRFPET--PQ 390
W G +Y+L+ G PF+ GN +F ++ FPE P+
Sbjct: 216 ---------------W-ALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLEYDFPEKFFPK 258
Query: 391 VSFVARDLIRGLLVKEPHKRIAYK--RGATEIKQHPFFEGVNWALVRSALPPHI 442
ARDL+ LLV + KR+ + G +K HPFFE V W + PP +
Sbjct: 259 ----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 149/354 (42%), Gaps = 80/354 (22%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+F+ K LG G +V L T+ +A+K+++K + NK+ ER+++ LDH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
PF LY F+ D+ + + G L L+ + F E RF+ +E++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILND 273
GI++RDLKPEN+L+ ++ HI ++DF +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTA------------------------------ 179
Query: 274 EYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYL 333
++L + + + F PEL+ E + +S
Sbjct: 180 ---------------KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDL------- 217
Query: 334 APEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFN-VVGQPLRFPET--PQ 390
W G +Y+L+ G PF+ GN +F ++ FPE P+
Sbjct: 218 ---------------W-ALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLEYDFPEKFFPK 260
Query: 391 VSFVARDLIRGLLVKEPHKRIAYK--RGATEIKQHPFFEGVNWALVRSALPPHI 442
ARDL+ LLV + KR+ + G +K HPFFE V W + PP +
Sbjct: 261 ----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 149/354 (42%), Gaps = 80/354 (22%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+F+ K LG G +V L T+ +A+K+++K + NK+ ER+++ LDH
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
PF LY F+ D+ + + G L L+ + F E RF+ +E++ ALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILND 273
GI++RDLKPEN+L+ ++ HI ++DF +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTA------------------------------ 177
Query: 274 EYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYL 333
++L + + + F PEL+ E + +S
Sbjct: 178 ---------------KVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDL------- 215
Query: 334 APEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFN-VVGQPLRFPET--PQ 390
W G +Y+L+ G PF+ GN +F ++ FPE P+
Sbjct: 216 ---------------W-ALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLEYDFPEKFFPK 258
Query: 391 VSFVARDLIRGLLVKEPHKRIAYK--RGATEIKQHPFFEGVNWALVRSALPPHI 442
ARDL+ LLV + KR+ + G +K HPFFE V W + PP +
Sbjct: 259 ----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 149/354 (42%), Gaps = 80/354 (22%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+F+ K LG G +V L T+ +A+K+++K + NK+ ER+++ LDH
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
PF LY F+ D+ + + G L L+ + F E RF+ +E++ ALEYLH
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLH 127
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILND 273
GI++RDLKPEN+L+ ++ HI ++DF +
Sbjct: 128 GKGIIHRDLKPENILLNEDMHIQITDFGTA------------------------------ 157
Query: 274 EYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYL 333
++L + + + F PEL+ E + +S
Sbjct: 158 ---------------KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDL------- 195
Query: 334 APEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFN-VVGQPLRFPET--PQ 390
W G +Y+L+ G PF+ GN +F ++ FPE P+
Sbjct: 196 ---------------W-ALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLEYDFPEKFFPK 238
Query: 391 VSFVARDLIRGLLVKEPHKRIAYK--RGATEIKQHPFFEGVNWALVRSALPPHI 442
ARDL+ LLV + KR+ + G +K HPFFE V W + PP +
Sbjct: 239 ----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 288
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 149/354 (42%), Gaps = 80/354 (22%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+F+ K LG G +V L T+ +A+K+++K + NK+ ER+++ LDH
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
PF LY F+ D+ + + G L L+ + F E RF+ +E++ ALEYLH
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLH 124
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILND 273
GI++RDLKPEN+L+ ++ HI ++DF +
Sbjct: 125 GKGIIHRDLKPENILLNEDMHIQITDFGTA------------------------------ 154
Query: 274 EYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYL 333
++L + + + F PEL+ E + +S
Sbjct: 155 ---------------KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDL------- 192
Query: 334 APEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFN-VVGQPLRFPET--PQ 390
W G +Y+L+ G PF+ GN +F ++ FPE P+
Sbjct: 193 ---------------W-ALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLEYDFPEKFFPK 235
Query: 391 VSFVARDLIRGLLVKEPHKRIAYK--RGATEIKQHPFFEGVNWALVRSALPPHI 442
ARDL+ LLV + KR+ + G +K HPFFE V W + PP +
Sbjct: 236 ----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 285
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 149/354 (42%), Gaps = 80/354 (22%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+F+ K LG G +V L T+ +A+K+++K + NK+ ER+++ LDH
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
PF LY F+ D+ + + G L L+ + F E RF+ +E++ ALEYLH
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLH 125
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILND 273
GI++RDLKPEN+L+ ++ HI ++DF +
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTA------------------------------ 155
Query: 274 EYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYL 333
++L + + + F PEL+ E + +S
Sbjct: 156 ---------------KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDL------- 193
Query: 334 APEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFN-VVGQPLRFPET--PQ 390
W G +Y+L+ G PF+ GN +F ++ FPE P+
Sbjct: 194 ---------------W-ALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLEYDFPEKFFPK 236
Query: 391 VSFVARDLIRGLLVKEPHKRIAYK--RGATEIKQHPFFEGVNWALVRSALPPHI 442
ARDL+ LLV + KR+ + G +K HPFFE V W + PP +
Sbjct: 237 ----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 286
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 149/353 (42%), Gaps = 80/353 (22%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+F+ K LG G +V L T+ +A+K+++K + NK+ ER+++ LDHP
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
F LY F+ D+ + + G L L+ + F E RF+ +E++ ALEYLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILNDE 274
GI++RDLKPEN+L+ ++ HI ++DF +
Sbjct: 151 KGIIHRDLKPENILLNEDMHIQITDFGTA------------------------------- 179
Query: 275 YAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLA 334
++L + + + F PEL+ E + +S
Sbjct: 180 --------------KVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDL-------- 217
Query: 335 PEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFN-VVGQPLRFPET--PQV 391
W G +Y+L+ G PF+ GN +F ++ FPE P+
Sbjct: 218 --------------W-ALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLEYDFPEKFFPK- 260
Query: 392 SFVARDLIRGLLVKEPHKRIAYK--RGATEIKQHPFFEGVNWALVRSALPPHI 442
ARDL+ LLV + KR+ + G +K HPFFE V W + PP +
Sbjct: 261 ---ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 80/352 (22%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+F+ K LG G +V L T+ +A+K+++K + NK+ ER+++ LDH
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
PF LY F+ D+ + + G L L+ + F E RF+ +E++ ALEYLH
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLH 126
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILND 273
GI++RDLKPEN+L+ ++ HI ++DF +
Sbjct: 127 GKGIIHRDLKPENILLNEDMHIQITDFGTA------------------------------ 156
Query: 274 EYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYL 333
++L + + + F PEL+ E + +S
Sbjct: 157 ---------------KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDL------- 194
Query: 334 APEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFN-VVGQPLRFPET--PQ 390
W G +Y+L+ G PF+ GN +F ++ FPE P+
Sbjct: 195 ---------------W-ALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLEYDFPEKFFPK 237
Query: 391 VSFVARDLIRGLLVKEPHKRIAYK--RGATEIKQHPFFEGVNWALVRSALPP 440
ARDL+ LLV + KR+ + G +K HPFFE V W + PP
Sbjct: 238 ----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 285
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 157/365 (43%), Gaps = 82/365 (22%)
Query: 87 RGP-PIGLSNFRLLKRLGYGDIGSVYLV-ELRGTNT--YFAMKVMDKASLASRNK-LLRA 141
RGP I F LL+ LG G G V+ V ++ G NT FAMKV+ KA + K
Sbjct: 9 RGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHT 68
Query: 142 QTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFF 201
+ ER IL + HPF+ L F+T L++E+ SGG L
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL-------------------- 108
Query: 202 ASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXX 261
+ L+ E + + D L++ ++L
Sbjct: 109 -----------------FMQLEREGIFMEDTACFYLAEISMAL----------------- 134
Query: 262 XXXXXXXXILNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNV 321
L+ + ++ ++P I+ + + +DFG C E + + T
Sbjct: 135 -------GHLHQKGIIYRDLKPEN----IMLNHQGHVKLTDFGLC-----KESIHDGT-- 176
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ 381
+ +F GT EY+APEI+ GH AVDWW+ G +Y++L G PF G+ + T+ ++
Sbjct: 177 VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC 236
Query: 382 PLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRG-ATEIKQHPFFEGVNWA--LVRSAL 438
L P P ++ ARDL++ LL + R+ G A E++ HPFF +NW L R
Sbjct: 237 KLNLP--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVE 294
Query: 439 PPHIP 443
PP P
Sbjct: 295 PPFKP 299
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 148/354 (41%), Gaps = 80/354 (22%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+F+ K LG G + L T+ +A+K+++K + NK+ ER+++ LDH
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
PF LY F+ D+ + + G L L+ + F E RF+ +E++ ALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILND 273
GI++RDLKPEN+L+ ++ HI ++DF +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTA------------------------------ 177
Query: 274 EYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYL 333
++L + + + F PEL+ E + +S
Sbjct: 178 ---------------KVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDL------- 215
Query: 334 APEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFN-VVGQPLRFPET--PQ 390
W G +Y+L+ G PF+ GN +F ++ FPE P+
Sbjct: 216 ---------------W-ALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLEYDFPEKFFPK 258
Query: 391 VSFVARDLIRGLLVKEPHKRIAYK--RGATEIKQHPFFEGVNWALVRSALPPHI 442
ARDL+ LLV + KR+ + G +K HPFFE V W + PP +
Sbjct: 259 ----ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 156/365 (42%), Gaps = 82/365 (22%)
Query: 87 RGP-PIGLSNFRLLKRLGYGDIGSVYLV-ELRGTNT--YFAMKVMDKASLASRNK-LLRA 141
RGP I F LL+ LG G G V+ V ++ G NT FAMKV+ KA + K
Sbjct: 9 RGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHT 68
Query: 142 QTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFF 201
+ ER IL + HPF+ L F+T L++E+ SGG L
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL-------------------- 108
Query: 202 ASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXX 261
+ L+ E + + D L++ ++L
Sbjct: 109 -----------------FMQLEREGIFMEDTACFYLAEISMAL----------------- 134
Query: 262 XXXXXXXXILNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNV 321
L+ + ++ ++P I+ + + +DFG C E + + T
Sbjct: 135 -------GHLHQKGIIYRDLKPEN----IMLNHQGHVKLTDFGLC-----KESIHDGT-- 176
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ 381
+ F GT EY+APEI+ GH AVDWW+ G +Y++L G PF G+ + T+ ++
Sbjct: 177 VTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC 236
Query: 382 PLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRG-ATEIKQHPFFEGVNWA--LVRSAL 438
L P P ++ ARDL++ LL + R+ G A E++ HPFF +NW L R
Sbjct: 237 KLNLP--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVE 294
Query: 439 PPHIP 443
PP P
Sbjct: 295 PPFKP 299
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 93/152 (61%), Gaps = 2/152 (1%)
Query: 89 PPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREIL 148
P L +F++L+ LG G G V+L+ R Y+AMKV+ K + ++ ER +L
Sbjct: 1 PKYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLML 60
Query: 149 GLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLA 208
++ HPF+ ++ F+ + ++M++ GG L SL +K ++ F A+F+A+EV LA
Sbjct: 61 SIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLA 118
Query: 209 LEYLHMLGIVYRDLKPENVLVRDEGHIMLSDF 240
LEYLH I+YRDLKPEN+L+ GHI ++DF
Sbjct: 119 LEYLHSKDIIYRDLKPENILLDKNGHIKITDF 150
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
IL K +DFG +P++ + GT +Y+APE++ + + ++DW
Sbjct: 137 ILLDKNGHIKITDFG--FAKYVPDV--------TYXLCGTPDYIAPEVVSTKPYNKSIDW 186
Query: 350 WTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHK 409
W+FGI +YE+L G TPF T ++ LRFP P + +DL+ L+ ++ +
Sbjct: 187 WSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP--PFFNEDVKDLLSRLITRDLSQ 244
Query: 410 RIA-YKRGATEIKQHPFFEGVNWA--LVRSALPPHIP 443
R+ + G ++K HP+F+ V W L R+ P+ P
Sbjct: 245 RLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEP 281
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 95/157 (60%), Gaps = 6/157 (3%)
Query: 89 PPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREIL 148
P + +++F LK LG G G V LV + T Y+AMK++ K + +++++ TE +L
Sbjct: 5 PKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 64
Query: 149 GLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAARFFASEVL 206
HPFL L F+T C VME+ +GG L H R+ + FTE+ ARF+ +E++
Sbjct: 65 QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIV 120
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
ALEYLH +VYRD+K EN+++ +GHI ++DF L
Sbjct: 121 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC 157
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 81/147 (55%), Gaps = 12/147 (8%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+DFG C G +++ ++ F GT EYLAPE++ +G AVDWW G+ +YE++
Sbjct: 152 TDFGLCKEG-----ISDGATMKX--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 204
Query: 361 HGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYK-RGATE 419
G PF Q + ++ + +RFP T +S A+ L+ GLL K+P +R+ A E
Sbjct: 205 CGRLPFYNQDHERLFELILMEEIRFPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKE 262
Query: 420 IKQHPFFEGVNWALV--RSALPPHIPE 444
+ +H FF +NW V + LPP P+
Sbjct: 263 VMEHRFFLSINWQDVVQKKLLPPFKPQ 289
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 94/154 (61%), Gaps = 6/154 (3%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ +++F LK LG G G V LV + T Y+AMK++ K + +++++ TE +L
Sbjct: 5 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 64
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAARFFASEVLLA 208
HPFL L F+T C VME+ +GG L H R+ + FTE+ ARF+ +E++ A
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSA 120
Query: 209 LEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL 242
LEYLH +VYRD+K EN+++ +GHI ++DF L
Sbjct: 121 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 154
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 12/147 (8%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+DFG C G +++ +++ F GT EYLAPE++ +G AVDWW G+ +YE++
Sbjct: 150 TDFGLCKEG-----ISDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 202
Query: 361 HGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYK-RGATE 419
G PF Q + ++ + +RFP T +S A+ L+ GLL K+P +R+ A E
Sbjct: 203 CGRLPFYNQDHERLFELILMEEIRFPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKE 260
Query: 420 IKQHPFFEGVNWALV--RSALPPHIPE 444
+ +H FF +NW V + LPP P+
Sbjct: 261 VMEHRFFLSINWQDVVQKKLLPPFKPQ 287
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 94/155 (60%), Gaps = 6/155 (3%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ +++F LK LG G G V LV + T Y+AMK++ K + +++++ TE +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAARFFASEVLLA 208
HPFL L F+T C VME+ +GG L H R+ + FTE+ ARF+ +E++ A
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSA 117
Query: 209 LEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
LEYLH +VYRD+K EN+++ +GHI ++DF L
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC 152
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 12/147 (8%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+DFG C G +++ +++ F GT EYLAPE++ +G AVDWW G+ +YE++
Sbjct: 147 TDFGLCKEG-----ISDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 361 HGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYK-RGATE 419
G PF Q + ++ + +RFP T +S A+ L+ GLL K+P +R+ A E
Sbjct: 200 CGRLPFYNQDHERLFELILMEEIRFPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKE 257
Query: 420 IKQHPFFEGVNWALV--RSALPPHIPE 444
+ +H FF +NW V + LPP P+
Sbjct: 258 VMEHRFFLSINWQDVVQKKLLPPFKPQ 284
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 94/155 (60%), Gaps = 6/155 (3%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ +++F LK LG G G V LV + T Y+AMK++ K + +++++ TE +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAARFFASEVLLA 208
HPFL L F+T C VME+ +GG L H R+ + FTE+ ARF+ +E++ A
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSA 117
Query: 209 LEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
LEYLH +VYRD+K EN+++ +GHI ++DF L
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC 152
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 12/147 (8%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+DFG C G +++ +++ F GT EYLAPE++ +G AVDWW G+ +YE++
Sbjct: 147 TDFGLCKEG-----ISDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 361 HGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYK-RGATE 419
G PF Q + ++ + +RFP T +S A+ L+ GLL K+P +R+ A E
Sbjct: 200 CGRLPFYNQDHERLFELILMEEIRFPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKE 257
Query: 420 IKQHPFFEGVNWALV--RSALPPHIPE 444
+ +H FF +NW V + LPP P+
Sbjct: 258 VMEHRFFLSINWQDVVQKKLLPPFKPQ 284
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 94/155 (60%), Gaps = 6/155 (3%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ +++F LK LG G G V LV + T Y+AMK++ K + +++++ TE +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAARFFASEVLLA 208
HPFL L F+T C VME+ +GG L H R+ + FTE+ ARF+ +E++ A
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSA 117
Query: 209 LEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
LEYLH +VYRD+K EN+++ +GHI ++DF L
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC 152
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 81/147 (55%), Gaps = 12/147 (8%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+DFG C G +++ ++ F GT EYLAPE++ +G AVDWW G+ +YE++
Sbjct: 147 TDFGLCKEG-----ISDGATMKX--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 361 HGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYK-RGATE 419
G PF Q + ++ + +RFP T +S A+ L+ GLL K+P +R+ A E
Sbjct: 200 CGRLPFYNQDHERLFELILMEEIRFPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKE 257
Query: 420 IKQHPFFEGVNWALV--RSALPPHIPE 444
+ +H FF +NW V + LPP P+
Sbjct: 258 VMEHRFFLSINWQDVVQKKLLPPFKPQ 284
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 94/155 (60%), Gaps = 6/155 (3%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ +++F LK LG G G V LV + T Y+AMK++ K + +++++ TE +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAARFFASEVLLA 208
HPFL L F+T C VME+ +GG L H R+ + FTE+ ARF+ +E++ A
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSA 117
Query: 209 LEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
LEYLH +VYRD+K EN+++ +GHI ++DF L
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC 152
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 81/147 (55%), Gaps = 12/147 (8%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+DFG C G +++ ++ F GT EYLAPE++ +G AVDWW G+ +YE++
Sbjct: 147 TDFGLCKEG-----ISDGATMKX--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 361 HGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYK-RGATE 419
G PF Q + ++ + +RFP T +S A+ L+ GLL K+P +R+ A E
Sbjct: 200 CGRLPFYNQDHERLFELILMEEIRFPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKE 257
Query: 420 IKQHPFFEGVNWALV--RSALPPHIPE 444
+ +H FF +NW V + LPP P+
Sbjct: 258 VMEHRFFLSINWQDVVQKKLLPPFKPQ 284
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 94/155 (60%), Gaps = 6/155 (3%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ +++F LK LG G G V LV + T Y+AMK++ K + +++++ TE +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAARFFASEVLLA 208
HPFL L F+T C VME+ +GG L H R+ + FTE+ ARF+ +E++ A
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSA 117
Query: 209 LEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
LEYLH +VYRD+K EN+++ +GHI ++DF L
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC 152
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 81/147 (55%), Gaps = 12/147 (8%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+DFG C G +++ ++ F GT EYLAPE++ +G AVDWW G+ +YE++
Sbjct: 147 TDFGLCKEG-----ISDGATMKX--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 361 HGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYK-RGATE 419
G PF Q + ++ + +RFP T +S A+ L+ GLL K+P +R+ A E
Sbjct: 200 CGRLPFYNQDHERLFELILMEEIRFPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKE 257
Query: 420 IKQHPFFEGVNWALV--RSALPPHIPE 444
+ +H FF +NW V + LPP P+
Sbjct: 258 VMEHRFFLSINWQDVVQKKLLPPFKPQ 284
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 98/164 (59%), Gaps = 9/164 (5%)
Query: 84 ISLRGPP--IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRA 141
+SL P + ++ F LK LG G G V LV+ + T Y+AMK++ K + +++++
Sbjct: 136 VSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT 195
Query: 142 QTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAAR 199
TE +L HPFL L F+T C VME+ +GG L H R+ + F+ED AR
Sbjct: 196 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRAR 251
Query: 200 FFASEVLLALEYLHM-LGIVYRDLKPENVLVRDEGHIMLSDFDL 242
F+ +E++ AL+YLH +VYRDLK EN+++ +GHI ++DF L
Sbjct: 252 FYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 295
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 76/149 (51%), Gaps = 16/149 (10%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+DFG C G +F GT EYLAPE++ +G AVDWW G+ +YE++
Sbjct: 291 TDFGLCKEGI-------KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 343
Query: 361 HGTTPFKGQGNRATLFNVVGQPLRFPET--PQVSFVARDLIRGLLVKEPHKRI-AYKRGA 417
G PF Q + ++ + +RFP T P+ A+ L+ GLL K+P +R+ A
Sbjct: 344 CGRLPFYNQDHEKLFELILMEEIRFPRTLGPE----AKSLLSGLLKKDPKQRLGGGSEDA 399
Query: 418 TEIKQHPFFEGVNWALV--RSALPPHIPE 444
EI QH FF G+ W V + PP P+
Sbjct: 400 KEIMQHRFFAGIVWQHVYEKKLSPPFKPQ 428
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 98/164 (59%), Gaps = 9/164 (5%)
Query: 84 ISLRGPP--IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRA 141
+SL P + ++ F LK LG G G V LV+ + T Y+AMK++ K + +++++
Sbjct: 139 VSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT 198
Query: 142 QTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAAR 199
TE +L HPFL L F+T C VME+ +GG L H R+ + F+ED AR
Sbjct: 199 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRAR 254
Query: 200 FFASEVLLALEYLHM-LGIVYRDLKPENVLVRDEGHIMLSDFDL 242
F+ +E++ AL+YLH +VYRDLK EN+++ +GHI ++DF L
Sbjct: 255 FYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 298
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 76/149 (51%), Gaps = 16/149 (10%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+DFG C G +F GT EYLAPE++ +G AVDWW G+ +YE++
Sbjct: 294 TDFGLCKEGI-------KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 346
Query: 361 HGTTPFKGQGNRATLFNVVGQPLRFPET--PQVSFVARDLIRGLLVKEPHKRI-AYKRGA 417
G PF Q + ++ + +RFP T P+ A+ L+ GLL K+P +R+ A
Sbjct: 347 CGRLPFYNQDHEKLFELILMEEIRFPRTLGPE----AKSLLSGLLKKDPKQRLGGGSEDA 402
Query: 418 TEIKQHPFFEGVNWALV--RSALPPHIPE 444
EI QH FF G+ W V + PP P+
Sbjct: 403 KEIMQHRFFAGIVWQHVYEKKLSPPFKPQ 431
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 95/152 (62%), Gaps = 3/152 (1%)
Query: 90 PIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
P+GL +F LL+ +G G V LV L+ T+ +AMKV+ K + + QTE+ +
Sbjct: 5 PLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 64
Query: 150 LL-DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLA 208
+HPFL L+S F+T+ V+E+ +GG+L Q+Q + E+ ARF+++E+ LA
Sbjct: 65 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLA 122
Query: 209 LEYLHMLGIVYRDLKPENVLVRDEGHIMLSDF 240
L YLH GI+YRDLK +NVL+ EGHI L+D+
Sbjct: 123 LNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY 154
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 83/156 (53%), Gaps = 22/156 (14%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+D+G C G P + T+ F GT Y+APEI+RGE +G +VDWW G+ ++E++
Sbjct: 152 TDYGMCKEGLRP---GDTTS----XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 204
Query: 361 HGTTPFK--------GQGNRATLFNVV-GQPLRFPETPQVSFVARDLIRGLLVKEPHKRI 411
G +PF Q LF V+ + +R P + +S A +++ L K+P +R+
Sbjct: 205 AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS--LSVKAASVLKSFLNKDPKERL 262
Query: 412 AY--KRGATEIKQHPFFEGVNWALV--RSALPPHIP 443
+ G +I+ HPFF V+W ++ + +PP P
Sbjct: 263 GCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKP 298
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 89 PPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREIL 148
P + ++ F LK LG G G V LV+ + T Y+AMK++ K + +++++ TE +L
Sbjct: 5 PRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 64
Query: 149 GLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAARFFASEVL 206
HPFL L F+T C VME+ +GG L H R+ + F+ED ARF+ +E++
Sbjct: 65 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIV 120
Query: 207 LALEYLHM-LGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
AL+YLH +VYRDLK EN+++ +GHI ++DF L
Sbjct: 121 SALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC 158
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+DFG C G F GT EYLAPE++ +G AVDWW G+ +YE++
Sbjct: 153 TDFGLCKEGI-------KDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 205
Query: 361 HGTTPFKGQGNRATLFNVVGQPLRFPET--PQVSFVARDLIRGLLVKEPHKRI-AYKRGA 417
G PF Q + ++ + +RFP T P+ A+ L+ GLL K+P +R+ A
Sbjct: 206 CGRLPFYNQDHEKLFELILMEEIRFPRTLGPE----AKSLLSGLLKKDPKQRLGGGSEDA 261
Query: 418 TEIKQHPFFEGVNWALV--RSALPPHIPE 444
EI QH FF G+ W V + PP P+
Sbjct: 262 KEIMQHRFFAGIVWQHVYEKKLSPPFKPQ 290
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 104/159 (65%), Gaps = 9/159 (5%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLV-ELRGTNT--YFAMKVMDKASLASRNKLLR-AQTERE 146
+G+ NF LLK LG G G V+LV ++ G +T +AMKV+ KA++ + K +TER+
Sbjct: 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ 110
Query: 147 ILG-LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQPNKYFTEDAARFFASE 204
+L + PFL TL+ F+T+ L++++ +GG L + L Q++ FTE + + E
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER---FTEHEVQIYVGE 167
Query: 205 VLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++LALE+LH LGI+YRD+K EN+L+ GH++L+DF LS
Sbjct: 168 IVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS 206
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 94/161 (58%), Gaps = 16/161 (9%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRG--EGHGSAVDWWTFGIFLYE 358
+DFG E +A+ T R+ F GT EY+AP+I+RG GH AVDWW+ G+ +YE
Sbjct: 201 TDFGLS-----KEFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYE 254
Query: 359 LLHGTTPFKGQGNRATLFNVVGQPLRF-PETPQ-VSFVARDLIRGLLVKEPHKRIAYK-R 415
LL G +PF G + + + + L+ P PQ +S +A+DLI+ LL+K+P KR+ R
Sbjct: 255 LLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPR 314
Query: 416 GATEIKQHPFFEGVNW-ALVRSALP----PHIPEPVDFSVF 451
A EIK+H FF+ +NW L +P P I + +D S F
Sbjct: 315 DADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDELDVSNF 355
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 88 GPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
G + ++ F LK LG G G V LV+ + T Y+AMK++ K + +++++ TE +
Sbjct: 2 GSRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 61
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAARFFASEV 205
L HPFL L F+T C VME+ +GG L H R+ + F+ED ARF+ +E+
Sbjct: 62 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEI 117
Query: 206 LLALEYLHM-LGIVYRDLKPENVLVRDEGHIMLSDFDL 242
+ AL+YLH +VYRDLK EN+++ +GHI ++DF L
Sbjct: 118 VSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 155
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+DFG C G F GT EYLAPE++ +G AVDWW G+ +YE++
Sbjct: 151 TDFGLCKEGI-------KDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 203
Query: 361 HGTTPFKGQGNRATLFNVVGQPLRFPET--PQVSFVARDLIRGLLVKEPHKRI-AYKRGA 417
G PF Q + ++ + +RFP T P+ A+ L+ GLL K+P +R+ A
Sbjct: 204 CGRLPFYNQDHEKLFELILMEEIRFPRTLGPE----AKSLLSGLLKKDPKQRLGGGSEDA 259
Query: 418 TEIKQHPFFEGVNWALV--RSALPPHIPE 444
EI QH FF G+ W V + PP P+
Sbjct: 260 KEIMQHRFFAGIVWQHVYEKKLSPPFKPQ 288
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 94/155 (60%), Gaps = 7/155 (4%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ ++ F LK LG G G V LV+ + T Y+AMK++ K + +++++ TE +L
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAARFFASEVLLA 208
HPFL L F+T C VME+ +GG L H R+ + F+ED ARF+ +E++ A
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSA 121
Query: 209 LEYLHM-LGIVYRDLKPENVLVRDEGHIMLSDFDL 242
L+YLH +VYRDLK EN+++ +GHI ++DF L
Sbjct: 122 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 156
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+DFG C G F GT EYLAPE++ +G AVDWW G+ +YE++
Sbjct: 152 TDFGLCKEGI-------KDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 204
Query: 361 HGTTPFKGQGNRATLFNVVGQPLRFPET--PQVSFVARDLIRGLLVKEPHKRI-AYKRGA 417
G PF Q + ++ + +RFP T P+ A+ L+ GLL K+P +R+ A
Sbjct: 205 CGRLPFYNQDHEKLFELILMEEIRFPRTLGPE----AKSLLSGLLKKDPKQRLGGGSEDA 260
Query: 418 TEIKQHPFFEGVNWALV--RSALPPHIPE 444
EI QH FF G+ W V + PP P+
Sbjct: 261 KEIMQHRFFAGIVWQHVYEKKLSPPFKPQ 289
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 95/153 (62%), Gaps = 3/153 (1%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+GL +F LL+ +G G V LV L+ T+ +AMKV+ K + + QTE+ +
Sbjct: 17 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 76
Query: 151 L-DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLAL 209
+HPFL L+S F+T+ V+E+ +GG+L Q+Q + E+ ARF+++E+ LAL
Sbjct: 77 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLAL 134
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL 242
YLH GI+YRDLK +NVL+ EGHI L+D+ +
Sbjct: 135 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 167
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 83/156 (53%), Gaps = 22/156 (14%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+D+G C G P + T+ F GT Y+APEI+RGE +G +VDWW G+ ++E++
Sbjct: 163 TDYGMCKEGLRP---GDTTS----XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 215
Query: 361 HGTTPFK--------GQGNRATLFNVV-GQPLRFPETPQVSFVARDLIRGLLVKEPHKRI 411
G +PF Q LF V+ + +R P + +S A +++ L K+P +R+
Sbjct: 216 AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS--MSVKAASVLKSFLNKDPKERL 273
Query: 412 AY--KRGATEIKQHPFFEGVNWALV--RSALPPHIP 443
+ G +I+ HPFF V+W ++ + +PP P
Sbjct: 274 GCLPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKP 309
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 94/151 (62%), Gaps = 3/151 (1%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+GL +F LL+ +G G V LV L+ T+ +AMKV+ K + + QTE+ +
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 151 L-DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLAL 209
+HPFL L+S F+T+ V+E+ +GG+L Q+Q + E+ ARF+++E+ LAL
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLAL 119
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDF 240
YLH GI+YRDLK +NVL+ EGHI L+D+
Sbjct: 120 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDY 150
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 83/156 (53%), Gaps = 22/156 (14%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+D+G C G P + T+ F GT Y+APEI+RGE +G +VDWW G+ ++E++
Sbjct: 148 TDYGMCKEGLRP---GDTTS----XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 200
Query: 361 HGTTPFK--------GQGNRATLFNVV-GQPLRFPETPQVSFVARDLIRGLLVKEPHKRI 411
G +PF Q LF V+ + +R P + +S A +++ L K+P +R+
Sbjct: 201 AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS--LSVKAASVLKSFLNKDPKERL 258
Query: 412 AY--KRGATEIKQHPFFEGVNWALV--RSALPPHIP 443
+ G +I+ HPFF V+W ++ + +PP P
Sbjct: 259 GCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKP 294
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 92/154 (59%), Gaps = 3/154 (1%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+G+ NF ++ LG G G V L ++ T +A+KV+ K + + + TE+ IL L
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 151 L-DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLAL 209
+HPFL L+ F+T VMEF +GG+L + Q ++ F E ARF+A+E++ AL
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYAAEIISAL 137
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+LH GI+YRDLK +NVL+ EGH L+DF +
Sbjct: 138 MFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMC 171
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 13/147 (8%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+DFG C G V + +F GT +Y+APEI++ +G AVDWW G+ LYE+L
Sbjct: 166 ADFGMCKEGIC-------NGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEML 218
Query: 361 HGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA--YKRGAT 418
G PF+ + ++ + +P A +++ + K P R+ + G
Sbjct: 219 CGHAPFEAENEDDLFEAILNDEVVYPTWLHED--ATGILKSFMTKNPTMRLGSLTQGGEH 276
Query: 419 EIKQHPFFEGVNWALV--RSALPPHIP 443
I +HPFF+ ++WA + R PP P
Sbjct: 277 AILRHPFFKEIDWAQLNHRQIEPPFRP 303
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 95/153 (62%), Gaps = 3/153 (1%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+GL +F LL+ +G G V LV L+ T+ +AM+V+ K + + QTE+ +
Sbjct: 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 151 L-DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLAL 209
+HPFL L+S F+T+ V+E+ +GG+L Q+Q + E+ ARF+++E+ LAL
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLAL 166
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL 242
YLH GI+YRDLK +NVL+ EGHI L+D+ +
Sbjct: 167 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 199
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 84/156 (53%), Gaps = 22/156 (14%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+D+G C G P + T+ +F GT Y+APEI+RGE +G +VDWW G+ ++E++
Sbjct: 195 TDYGMCKEGLRP---GDTTS----TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 247
Query: 361 HGTTPFK--------GQGNRATLFNVV-GQPLRFPETPQVSFVARDLIRGLLVKEPHKRI 411
G +PF Q LF V+ + +R P + +S A +++ L K+P +R+
Sbjct: 248 AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS--LSVKAASVLKSFLNKDPKERL 305
Query: 412 AY--KRGATEIKQHPFFEGVNWALV--RSALPPHIP 443
+ G +I+ HPFF V+W ++ + +PP P
Sbjct: 306 GCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKP 341
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + T +FAMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + T +FAMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + T +FAMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 97/164 (59%), Gaps = 5/164 (3%)
Query: 81 INMISLRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLR 140
IN+ P S+F LK +G G G V L + ++A+KV+ K ++ + +
Sbjct: 25 INLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKH 84
Query: 141 AQTEREIL-GLLDHPFLPTLYSYFET-DKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA 198
+ER +L + HPFL L+ F+T DK Y V+++ +GG L Q++ + F E A
Sbjct: 85 IMSERNVLLKNVKHPFLVGLHFSFQTADKLY-FVLDYINGGELFYHLQRE--RCFLEPRA 141
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL 242
RF+A+E+ AL YLH L IVYRDLKPEN+L+ +GHI+L+DF L
Sbjct: 142 RFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGL 185
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+DFG C N + +F GT EYLAPE++ + + VDWW G LYE+L
Sbjct: 181 TDFGLCKENI-------EHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233
Query: 361 HGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEI 420
+G PF + N++ +PL+ P ++ AR L+ GLL K+ KR+ K EI
Sbjct: 234 YGLPPFYSRNTAEMYDNILNKPLQL--KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291
Query: 421 KQHPFFEGVNW 431
K H FF +NW
Sbjct: 292 KSHVFFSLINW 302
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + T ++AMK++DK + ++ E+ IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 158
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +I H +F +W
Sbjct: 248 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFATTDWIA 305
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 306 IYQRKVEAPFIPKFKGPGDTSNF 328
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + T ++AMK++DK + ++ E+ IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 158
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 306 IYQRKVEAPFIPKFKGPGDTSNF 328
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + T ++AMK++DK + ++ E+ IL ++
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 178
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 208 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 267
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 268 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 325
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 326 IYQRKVEAPFIPKFKGPGDTSNF 348
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + T ++AMK++DK + ++ E+ IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 158
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 306 IYQRKVEAPFIPKFKGPGDTSNF 328
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ T ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ +GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + + ++AMK++DK + ++ E+ IL ++
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ +GG + S ++ F+E ARF+A++++L EYL
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 178
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 323 SMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQP 382
+ + GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +V
Sbjct: 216 TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 275
Query: 383 LRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWALV--RSALP 439
+RFP S +DL+R LL + KR K G +IK H +F +W + R
Sbjct: 276 VRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEA 333
Query: 440 PHIPE---PVDFSVF 451
P IP+ P D S F
Sbjct: 334 PFIPKFKGPGDTSNF 348
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + T ++AMK++DK + ++ E+ IL ++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 150
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 151 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 180 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 239
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 240 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 297
Query: 434 V--RSALPPHIPE 444
+ R P IP+
Sbjct: 298 IYQRKVEAPFIPK 310
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + + ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ +GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 93/155 (60%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + + ++AMK++DK + ++ E+ IL ++
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ +GG + S ++ F+E ARF+A++++L EYL
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 144
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+L+ ++G+I ++DF + R
Sbjct: 145 HSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK 179
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 174 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 233
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 234 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 291
Query: 434 V--RSALPPHIPE 444
+ R P IP+
Sbjct: 292 IYQRKVEAPFIPK 304
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + + ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ +GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + + ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ +GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE 444
+ R P IP+
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + + ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ +GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT E LAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + + ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ +GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +Y++ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + + ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ +GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + + ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ +GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + K K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + + ++AMK++DK + ++ E+ IL ++
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ +GG + S ++ F+E ARF+A++++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 158
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 306 IYQRKVEAPFIPKFKGPGDTSNF 328
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + + ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ +GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + + ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ +GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAP II +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + + ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ +GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ T ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+++ +G+I ++DF L+ R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV 191
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 69/143 (48%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
+A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + T ++AMK++DK + ++ E+ IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 158
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+++ +G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 306 IYQRKVEAPFIPKFKGPGDTSNF 328
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + + ++AMK++DK + ++ E+ IL ++
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ +GG + S ++ F E ARF+A++++L EYL
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYL 178
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 208 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 267
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 268 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 325
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 326 IYQRKVEAPFIPKFKGPGDTSNF 348
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + + ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ +GG + S ++ F E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FAEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + T ++AMK++DK + ++ E+ IL ++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F E ARF+A++++L EYL
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYL 150
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 151 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 180 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 239
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 240 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 297
Query: 434 V--RSALPPHIPE 444
+ R P IP+
Sbjct: 298 IYQRKVEAPFIPK 310
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + + ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ +GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+++ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV 191
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ T ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+++ +G+I ++DF L+ R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK 192
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 69/143 (48%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
+A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ T ++AMK++DK + ++ E+ IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 158
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 69/143 (48%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ + GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 306 IYQRKVEAPFIPKFKGPGDTSNF 328
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + + ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ +GG + S ++ F E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 90/155 (58%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ T ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + + ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ +GG + S ++ F E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 90/155 (58%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ T ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 90/155 (58%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ T ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + + ++AMK++DK + ++ E+ IL ++
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ +GG + S ++ F E ARF+A++++L EYL
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYL 152
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 153 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 187
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 182 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 241
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 242 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 299
Query: 434 V--RSALPPHIPE 444
+ R P IP+
Sbjct: 300 IYQRKVEAPFIPK 312
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 90/155 (58%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ T ++AMK++DK + ++ E+ IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 158
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 306 IYQRKVEAPFIPKFKGPGDTSNF 328
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ + + ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ +GG + S ++ F E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 90/155 (58%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ T ++AMK++DK + ++ E+ IL ++
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 143
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 144 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 178
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 65/133 (48%), Gaps = 5/133 (3%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ + GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 173 FAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 232
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 233 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 290
Query: 434 V--RSALPPHIPE 444
+ R P IP+
Sbjct: 291 IYQRKVEAPFIPK 303
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ T ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+++ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV 191
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ T ++AMK++DK + ++ E+ IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 158
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
H L ++YRDLKPEN+++ +G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 306 IYQRKVEAPFIPKFKGPGDTSNF 328
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 90/155 (58%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ T ++AMK++DK + ++ E+ IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 158
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+++ +G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 193
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 306 IYQRKVEAPFIPKFKGPGDTSNF 328
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 89/155 (57%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ T ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 89/155 (57%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ T ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 89/155 (57%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ T ++AMK++DK + ++ E+ IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F E ARF+A++++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYL 158
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 306 IYQRKVEAPFIPKFKGPGDTSNF 328
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 90/155 (58%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ T ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+++ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 192
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K +G G G V LV+ T ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG++ S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK 192
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K +G G G V LV+ T ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG++ S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK 192
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 90/155 (58%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K +G G G V LV+ T ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK 192
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 91/154 (59%), Gaps = 3/154 (1%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ + +F L K LG G G V+L E + TN +FA+K + K + + + E+ +L L
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 74
Query: 151 -LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLAL 209
+HPFL ++ F+T + VME+ +GG+L + Q F A F+A+E++L L
Sbjct: 75 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGL 132
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++LH GIVYRDLK +N+L+ +GHI ++DF +
Sbjct: 133 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMC 166
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 85/167 (50%), Gaps = 17/167 (10%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
IL K +DFG C L + ++ F GT +Y+APEI+ G+ + +VDW
Sbjct: 150 ILLDKDGHIKIADFGMCKENML-------GDAKTNEFCGTPDYIAPEILLGQKYNHSVDW 202
Query: 350 WTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHK 409
W+FG+ LYE+L G +PF GQ ++ +P + A+DL+ L V+EP K
Sbjct: 203 WSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKE--AKDLLVKLFVREPEK 260
Query: 410 RIAYKRGATEIKQHPFFEGVNW-ALVRSALP----PHIPEPVDFSVF 451
R+ RG +I+QHP F +NW L R + P + P D S F
Sbjct: 261 RLGV-RG--DIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNF 304
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 89/155 (57%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ T ++AMK++DK + ++ E+ IL ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F E ARF+A++++L EYL
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYL 158
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+++ +G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 193
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 306 IYQRKVEAPFIPKFKGPGDTSNF 328
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 89/155 (57%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F +K LG G G V LV+ T ++AMK++DK + ++ E+ IL ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +VME+ GG + S ++ F E ARF+A++++L EYL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+++ +G+I ++DF + R
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 192
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 305 IYQRKVEAPFIPKFKGPGDTSNF 327
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 91/154 (59%), Gaps = 3/154 (1%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ + +F L K LG G G V+L E + TN +FA+K + K + + + E+ +L L
Sbjct: 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 73
Query: 151 -LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLAL 209
+HPFL ++ F+T + VME+ +GG+L + Q F A F+A+E++L L
Sbjct: 74 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGL 131
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++LH GIVYRDLK +N+L+ +GHI ++DF +
Sbjct: 132 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMC 165
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 85/167 (50%), Gaps = 17/167 (10%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
IL K +DFG C L + ++ F GT +Y+APEI+ G+ + +VDW
Sbjct: 149 ILLDKDGHIKIADFGMCKENML-------GDAKTNXFCGTPDYIAPEILLGQKYNHSVDW 201
Query: 350 WTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHK 409
W+FG+ LYE+L G +PF GQ ++ +P + A+DL+ L V+EP K
Sbjct: 202 WSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKE--AKDLLVKLFVREPEK 259
Query: 410 RIAYKRGATEIKQHPFFEGVNW-ALVRSALP----PHIPEPVDFSVF 451
R+ RG +I+QHP F +NW L R + P + P D S F
Sbjct: 260 RLGV-RG--DIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNF 303
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 91/153 (59%), Gaps = 2/153 (1%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ +F +L+ +G G G V +V+ T +AMK M+K RN++ E +I+
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
L+HPFL L+ F+ ++ +V++ GG+L Q N +F E+ + F E+++AL+
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRY--HLQQNVHFKEETVKLFICELVMALD 129
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
YL I++RD+KP+N+L+ + GH+ ++DF+++
Sbjct: 130 YLQNQRIIHRDMKPDNILLDEHGHVHITDFNIA 162
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 271 LNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTH 330
L ++ +H M+P IL + +DF + LP T + +M+ GT
Sbjct: 131 LQNQRIIHRDMKPDN----ILLDEHGHVHITDFN--IAAMLPR----ETQITTMA--GTK 178
Query: 331 EYLAPEII---RGEGHGSAVDWWTFGIFLYELLHGTTPF---KGQGNRATLFNVVGQPLR 384
Y+APE+ +G G+ AVDWW+ G+ YELL G P+ ++ + +
Sbjct: 179 PYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVT 238
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALV--RSALPPHI 442
+P V+ L++ LL P +R + ++++ P+ +NW V + +P I
Sbjct: 239 YPSAWSQEMVS--LLKKLLEPNPDQRFS---QLSDVQNFPYMNDINWDAVFQKRLIPGFI 293
Query: 443 P 443
P
Sbjct: 294 P 294
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 92/155 (59%), Gaps = 5/155 (3%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ L++F L LG G G V L + +GT +A+K++ K + + + E+ +L L
Sbjct: 16 VKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLAL 75
Query: 151 LDHP-FLPTLYSYFET-DKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLA 208
LD P FL L+S F+T D+ Y VME+ +GG+L + Q F E A F+A+E+ +
Sbjct: 76 LDKPPFLTQLHSCFQTVDRLY-FVMEYVNGGDL--MYHIQQVGKFKEPQAVFYAAEISIG 132
Query: 209 LEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
L +LH GI+YRDLK +NV++ EGHI ++DF +
Sbjct: 133 LFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMC 167
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 79/147 (53%), Gaps = 12/147 (8%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+DFG C E M + R F GT +Y+APEII + +G +VDWW +G+ LYE+L
Sbjct: 162 ADFGMC-----KEHMMDGVTTRE--FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEML 214
Query: 361 HGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYK-RGATE 419
G PF G+ +++ + +P++ +S A + +GL+ K P KR+ G +
Sbjct: 215 AGQPPFDGEDEDELFQSIMEHNVSYPKS--LSKEAVSICKGLMTKHPAKRLGCGPEGERD 272
Query: 420 IKQHPFFEGVNWALV--RSALPPHIPE 444
+++H FF ++W + R PP P+
Sbjct: 273 VREHAFFRRIDWEKLENREIQPPFKPK 299
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 90/155 (58%), Gaps = 2/155 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L F ++ LG G G V LV+ + T ++AMK++DK + ++ E+ I ++
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
PFL L F+ + +V+E+ GG + S ++ F+E ARF+A++++L EYL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYL 158
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H L ++YRDLKPEN+L+ +G+I ++DF + R
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK 193
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRAT 374
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 375 LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA-YKRGATEIKQHPFFEGVNWAL 433
+V +RFP S +DL+R LL + KR K G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 434 V--RSALPPHIPE---PVDFSVF 451
+ R P IP+ P D S F
Sbjct: 306 IYQRKVEAPFIPKFKGPGDTSNF 328
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 95/160 (59%), Gaps = 3/160 (1%)
Query: 86 LRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTER 145
+RG + ++ ++K +G G G V LV + + +AMK++ K + R+ ER
Sbjct: 67 IRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEER 126
Query: 146 EILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEV 205
+I+ + P++ L+ F+ DK+ +VME+ GG+L +L N E A+F+ +EV
Sbjct: 127 DIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNL---MSNYDVPEKWAKFYTAEV 183
Query: 206 LLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLR 245
+LAL+ +H +G+++RD+KP+N+L+ GH+ L+DF ++
Sbjct: 184 VLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMK 223
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 20/176 (11%)
Query: 277 VHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPE 336
+H ++P +L K +DFG C+ M E V + VGT +Y++PE
Sbjct: 196 IHRDVKPDN----MLLDKHGHLKLADFGTCMK------MDETGMVHCDTAVGTPDYISPE 245
Query: 337 IIRGEG----HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ--PLRFPETPQ 390
+++ +G +G DWW+ G+FL+E+L G TPF T ++ L FPE +
Sbjct: 246 VLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAE 305
Query: 391 VSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEG--VNWALVRSALPPHIPE 444
+S A++LI L + R+ + G EIKQHPFF+ NW +R P +PE
Sbjct: 306 ISKHAKNLICAFLT-DREVRLG-RNGVEEIKQHPFFKNDQWNWDNIRETAAPVVPE 359
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 162/368 (44%), Gaps = 81/368 (22%)
Query: 86 LRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTER 145
L P+G F + LG G G V+ +++ T +A K ++K L R A E+
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 146 EILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAARFFAS 203
+IL + F+ +L FET CLVM +GG++ H + N F E A F+ +
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXX 263
+++ LE+LH N++ RD + P V
Sbjct: 297 QIVSGLEHLHQ----------RNIIYRD----------------LKPENV---------- 320
Query: 264 XXXXXXILNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRS 323
+L+D+ V RI SD G V EL A T +
Sbjct: 321 ------LLDDDGNV-----------RI----------SDLGLAV-----ELKAGQTKTKG 348
Query: 324 MSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQG----NRATLFNVV 379
+ GT ++APE++ GE + +VD++ G+ LYE++ PF+ +G N+ V+
Sbjct: 349 --YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVL 406
Query: 380 GQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATE-IKQHPFFEGVNWALVRSAL 438
Q + +P+ + S ++D LL K+P KR+ ++ G+ + ++ HP F ++W + + +
Sbjct: 407 EQAVTYPD--KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGM 464
Query: 439 --PPHIPE 444
PP +P+
Sbjct: 465 LTPPFVPD 472
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 162/368 (44%), Gaps = 81/368 (22%)
Query: 86 LRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTER 145
L P+G F + LG G G V+ +++ T +A K ++K L R A E+
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 146 EILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAARFFAS 203
+IL + F+ +L FET CLVM +GG++ H + N F E A F+ +
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXX 263
+++ LE+LH N++ RD + P V
Sbjct: 297 QIVSGLEHLHQ----------RNIIYRD----------------LKPENV---------- 320
Query: 264 XXXXXXILNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRS 323
+L+D+ V RI SD G V EL A T +
Sbjct: 321 ------LLDDDGNV-----------RI----------SDLGLAV-----ELKAGQTKTKG 348
Query: 324 MSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQG----NRATLFNVV 379
+ GT ++APE++ GE + +VD++ G+ LYE++ PF+ +G N+ V+
Sbjct: 349 --YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVL 406
Query: 380 GQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATE-IKQHPFFEGVNWALVRSAL 438
Q + +P+ + S ++D LL K+P KR+ ++ G+ + ++ HP F ++W + + +
Sbjct: 407 EQAVTYPD--KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGM 464
Query: 439 --PPHIPE 444
PP +P+
Sbjct: 465 LTPPFVPD 472
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 162/368 (44%), Gaps = 81/368 (22%)
Query: 86 LRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTER 145
L P+G F + LG G G V+ +++ T +A K ++K L R A E+
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 146 EILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAARFFAS 203
+IL + F+ +L FET CLVM +GG++ H + N F E A F+ +
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXX 263
+++ LE+LH N++ RD + P V
Sbjct: 297 QIVSGLEHLHQ----------RNIIYRD----------------LKPENV---------- 320
Query: 264 XXXXXXILNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRS 323
+L+D+ V RI SD G V EL A T +
Sbjct: 321 ------LLDDDGNV-----------RI----------SDLGLAV-----ELKAGQTKTKG 348
Query: 324 MSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQG----NRATLFNVV 379
+ GT ++APE++ GE + +VD++ G+ LYE++ PF+ +G N+ V+
Sbjct: 349 --YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVL 406
Query: 380 GQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATE-IKQHPFFEGVNWALVRSAL 438
Q + +P+ + S ++D LL K+P KR+ ++ G+ + ++ HP F ++W + + +
Sbjct: 407 EQAVTYPD--KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGM 464
Query: 439 --PPHIPE 444
PP +P+
Sbjct: 465 LTPPFVPD 472
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 162/368 (44%), Gaps = 81/368 (22%)
Query: 86 LRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTER 145
L P+G F + LG G G V+ +++ T +A K ++K L R A E+
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 146 EILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAARFFAS 203
+IL + F+ +L FET CLVM +GG++ H + N F E A F+ +
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXX 263
+++ LE+LH N++ RD + P V
Sbjct: 297 QIVSGLEHLHQ----------RNIIYRD----------------LKPENV---------- 320
Query: 264 XXXXXXILNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRS 323
+L+D+ V RI SD G V EL A T +
Sbjct: 321 ------LLDDDGNV-----------RI----------SDLGLAV-----ELKAGQTKTKG 348
Query: 324 MSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQG----NRATLFNVV 379
+ GT ++APE++ GE + +VD++ G+ LYE++ PF+ +G N+ V+
Sbjct: 349 --YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVL 406
Query: 380 GQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATE-IKQHPFFEGVNWALVRSAL 438
Q + +P+ + S ++D LL K+P KR+ ++ G+ + ++ HP F ++W + + +
Sbjct: 407 EQAVTYPD--KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGM 464
Query: 439 --PPHIPE 444
PP +P+
Sbjct: 465 LTPPFVPD 472
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 97/169 (57%), Gaps = 5/169 (2%)
Query: 79 DAINMISLRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL 138
D IN I R + ++ ++K +G G G V LV + T +AMK++ K + R+
Sbjct: 61 DTINKI--RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDS 118
Query: 139 LRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA 198
ER+I+ + P++ L+ F+ D++ +VME+ GG+L +L N E A
Sbjct: 119 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL---MSNYDVPEKWA 175
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
RF+ +EV+LAL+ +H +G ++RD+KP+N+L+ GH+ L+DF ++ +
Sbjct: 176 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 224
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 20/176 (11%)
Query: 277 VHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPE 336
+H ++P +L K +DFG C+ M + VR + VGT +Y++PE
Sbjct: 195 IHRDVKPDN----MLLDKSGHLKLADFGTCMK------MNKEGMVRCDTAVGTPDYISPE 244
Query: 337 IIRGEG----HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVG--QPLRFPETPQ 390
+++ +G +G DWW+ G+FLYE+L G TPF T ++ L FP+
Sbjct: 245 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDND 304
Query: 391 VSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWAL--VRSALPPHIPE 444
+S A++LI L + R+ + G EIK+H FF+ WA +R + P +P+
Sbjct: 305 ISKEAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPD 358
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 97/169 (57%), Gaps = 5/169 (2%)
Query: 79 DAINMISLRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL 138
D IN I R + ++ ++K +G G G V LV + T +AMK++ K + R+
Sbjct: 56 DTINKI--RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDS 113
Query: 139 LRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA 198
ER+I+ + P++ L+ F+ D++ +VME+ GG+L +L N E A
Sbjct: 114 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL---MSNYDVPEKWA 170
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
RF+ +EV+LAL+ +H +G ++RD+KP+N+L+ GH+ L+DF ++ +
Sbjct: 171 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 219
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 20/176 (11%)
Query: 277 VHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPE 336
+H ++P +L K +DFG C+ M + VR + VGT +Y++PE
Sbjct: 190 IHRDVKPDN----MLLDKSGHLKLADFGTCMK------MNKEGMVRCDTAVGTPDYISPE 239
Query: 337 IIRGEG----HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVG--QPLRFPETPQ 390
+++ +G +G DWW+ G+FLYE+L G TPF T ++ L FP+
Sbjct: 240 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDND 299
Query: 391 VSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWAL--VRSALPPHIPE 444
+S A++LI L + R+ + G EIK+H FF+ WA +R + P +P+
Sbjct: 300 ISKEAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPD 353
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 96/167 (57%), Gaps = 5/167 (2%)
Query: 79 DAINMISLRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL 138
D IN I R + ++ ++K +G G G V LV + T +AMK++ K + R+
Sbjct: 61 DTINKI--RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDS 118
Query: 139 LRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA 198
ER+I+ + P++ L+ F+ D++ +VME+ GG+L +L N E A
Sbjct: 119 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL---MSNYDVPEKWA 175
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLR 245
RF+ +EV+LAL+ +H +G ++RD+KP+N+L+ GH+ L+DF ++
Sbjct: 176 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 222
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 20/176 (11%)
Query: 277 VHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPE 336
+H ++P +L K +DFG C+ M + VR + VGT +Y++PE
Sbjct: 195 IHRDVKPDN----MLLDKSGHLKLADFGTCMK------MNKEGMVRCDTAVGTPDYISPE 244
Query: 337 IIRGEG----HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVG--QPLRFPETPQ 390
+++ +G +G DWW+ G+FLYE+L G TPF T ++ L FP+
Sbjct: 245 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDND 304
Query: 391 VSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWAL--VRSALPPHIPE 444
+S A++LI L + R+ + G EIK+H FF+ WA +R + P +P+
Sbjct: 305 ISKEAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPD 358
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 103/177 (58%), Gaps = 1/177 (0%)
Query: 76 VRWDAINMISLRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASR 135
++W ++ L+ + +F +LK +G G V +V+++ T +AMK+M+K + R
Sbjct: 43 LQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKR 102
Query: 136 NKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE 195
++ + ER++L D ++ L+ F+ + + LVME+ GG+L +L K + E
Sbjct: 103 GEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAE 162
Query: 196 DAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTL 252
ARF+ +E+++A++ +H LG V+RD+KP+N+L+ GHI L+DF L+ T+
Sbjct: 163 -MARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV 218
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 90/178 (50%), Gaps = 22/178 (12%)
Query: 277 VHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPE 336
VH ++P IL + +DFG C+ +L A+ T VRS+ VGT +YL+PE
Sbjct: 184 VHRDIKPDN----ILLDRCGHIRLADFGSCL-----KLRADGT-VRSLVAVGTPDYLSPE 233
Query: 337 IIRGEGHGSA-------VDWWTFGIFLYELLHGTTPFKGQGNRATLFNVV--GQPLRFPE 387
I++ G G DWW G+F YE+ +G TPF T +V + L P
Sbjct: 234 ILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPL 293
Query: 388 TPQ-VSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE 444
+ V ARD I+ LL P R+ + GA + + HPFF G++W +R ++PP P+
Sbjct: 294 VDEGVPEEARDFIQRLLCP-PETRLG-RGGAGDFRTHPFFFGLDWDGLRDSVPPFTPD 349
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 94/151 (62%), Gaps = 1/151 (0%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+F +LK +G G G V +V+L+ + FAMK+++K + R + + ER++L D
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
++ TL+ F+ D LVM++ GG+L +L K ++ E+ ARF+ +E+++A++ +H
Sbjct: 135 WITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIAIDSVHQ 193
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLSLR 245
L V+RD+KP+N+L+ GHI L+DF L+
Sbjct: 194 LHYVHRDIKPDNILMDMNGHIRLADFGSCLK 224
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 93/168 (55%), Gaps = 19/168 (11%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIR----GEG-HGSAVDWWTFGIF 355
+DFG C+ +LM + T V+S VGT +Y++PEI++ G+G +G DWW+ G+
Sbjct: 217 ADFGSCL-----KLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVC 270
Query: 356 LYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFV---ARDLIRGLLVKEPHKRIA 412
+YE+L+G TPF + T ++ RF QV+ V A+DLIR L+ H+
Sbjct: 271 MYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHR--L 328
Query: 413 YKRGATEIKQHPFFEGVNWALVRSALPPHIPE---PVDFSVFAGKDQA 457
+ G + K+HPFF G++W +R+ P+IPE P D S F D
Sbjct: 329 GQNGIEDFKKHPFFSGIDWDNIRNCEAPYIPEVSSPTDTSNFDVDDDC 376
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 90/155 (58%), Gaps = 5/155 (3%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ L++F L LG G G V L E +GT+ +A+K++ K + + + E+ +L L
Sbjct: 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 397
Query: 151 LDHP-FLPTLYSYFET-DKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLA 208
P FL L+S F+T D+ Y VME+ +GG+L + Q F E A F+A+E+ +
Sbjct: 398 PGKPPFLTQLHSCFQTMDRLY-FVMEYVNGGDL--MYHIQQVGRFKEPHAVFYAAEIAIG 454
Query: 209 LEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
L +L GI+YRDLK +NV++ EGHI ++DF +
Sbjct: 455 LFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMC 489
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 12/147 (8%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+DFG C V + F GT +Y+APEII + +G +VDWW FG+ LYE+L
Sbjct: 484 ADFGMCKENIW-------DGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 536
Query: 361 HGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYK-RGATE 419
G PF+G+ +++ + +P++ VA + +GL+ K P KR+ G +
Sbjct: 537 AGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVA--ICKGLMTKHPGKRLGCGPEGERD 594
Query: 420 IKQHPFFEGVNWALV--RSALPPHIPE 444
IK+H FF ++W + + PP+ P+
Sbjct: 595 IKEHAFFRYIDWEKLERKEIQPPYKPK 621
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 89/153 (58%), Gaps = 5/153 (3%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L++F L LG G G V L E +GT+ +A+K++ K + + + E+ +L L
Sbjct: 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 78
Query: 153 HP-FLPTLYSYFET-DKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
P FL L+S F+T D+ Y VME+ +GG+L + Q F E A F+A+E+ + L
Sbjct: 79 KPPFLTQLHSCFQTMDRLY-FVMEYVNGGDL--MYHIQQVGRFKEPHAVFYAAEIAIGLF 135
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+L GI+YRDLK +NV++ EGHI ++DF +
Sbjct: 136 FLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMC 168
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 12/147 (8%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+DFG C V + F GT +Y+APEII + +G +VDWW FG+ LYE+L
Sbjct: 163 ADFGMCKENIW-------DGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 215
Query: 361 HGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYK-RGATE 419
G PF+G+ +++ + +P++ VA + +GL+ K P KR+ G +
Sbjct: 216 AGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVA--ICKGLMTKHPGKRLGCGPEGERD 273
Query: 420 IKQHPFFEGVNWALV--RSALPPHIPE 444
IK+H FF ++W + + PP+ P+
Sbjct: 274 IKEHAFFRYIDWEKLERKEIQPPYKPK 300
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 84/159 (52%)
Query: 86 LRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTER 145
L P+ + FR + LG G G V ++R T +A K ++K + R A E+
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 146 EILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEV 205
+IL ++ F+ +L +ET CLV+ +GG+L F E A F+A+E+
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEI 295
Query: 206 LLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSL 244
LE LH IVYRDLKPEN+L+ D GHI +SD L++
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAV 334
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 5/124 (4%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFP 386
VGT Y+APE+++ E + + DWW G LYE++ G +PF+ + + V P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 387 E--TPQVSFVARDLIRGLLVKEPHKRIAYKRG-ATEIKQHPFFEGVNWALVRSAL--PPH 441
E + + S AR L LL K+P +R+ + G A E+K+HP F+ +N+ + + + PP
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF 465
Query: 442 IPEP 445
P+P
Sbjct: 466 KPDP 469
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 84/159 (52%)
Query: 86 LRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTER 145
L P+ + FR + LG G G V ++R T +A K ++K + R A E+
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 146 EILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEV 205
+IL ++ F+ +L +ET CLV+ +GG+L F E A F+A+E+
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEI 295
Query: 206 LLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSL 244
LE LH IVYRDLKPEN+L+ D GHI +SD L++
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAV 334
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 5/124 (4%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFP 386
VGT Y+APE+++ E + + DWW G LYE++ G +PF+ + + V P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 387 E--TPQVSFVARDLIRGLLVKEPHKRIAYKRG-ATEIKQHPFFEGVNWALVRSAL--PPH 441
E + + S AR L LL K+P +R+ + G A E+K+HP F+ +N+ + + + PP
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF 465
Query: 442 IPEP 445
P+P
Sbjct: 466 KPDP 469
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 89/163 (54%), Gaps = 9/163 (5%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ +++F + + +G G G VY T +AMK +DK + + A ER +L L
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 244
Query: 151 L---DHPFLPTLYSYFETDKFYCLVMEFCSGGNLH-SLRQKQPNKYFTEDAARFFASEVL 206
+ D PF+ + F T +++ +GG+LH L Q + F+E RF+A+E++
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEII 301
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVS 249
L LE++H +VYRDLKP N+L+ + GH+ +S DL L C S
Sbjct: 302 LGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFS 342
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 75/128 (58%), Gaps = 17/128 (13%)
Query: 327 VGTHEYLAPEII-RGEGHGSAVDWWTFGIFLYELLHGTTPF-------KGQGNRATLFNV 378
VGTH Y+APE++ +G + S+ DW++ G L++LL G +PF K + +R TL
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 409
Query: 379 VGQPLRFPETPQVSFVARDLIRGLLVKEPHKRI-AYKRGATEIKQHPFFEGVNWALV--R 435
V P F +P++ R L+ GLL ++ ++R+ RGA E+K+ PFF ++W +V +
Sbjct: 410 VELPDSF--SPEL----RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 463
Query: 436 SALPPHIP 443
PP IP
Sbjct: 464 KYPPPLIP 471
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 89/163 (54%), Gaps = 9/163 (5%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ +++F + + +G G G VY T +AMK +DK + + A ER +L L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 151 L---DHPFLPTLYSYFETDKFYCLVMEFCSGGNLH-SLRQKQPNKYFTEDAARFFASEVL 206
+ D PF+ + F T +++ +GG+LH L Q + F+E RF+A+E++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEII 302
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVS 249
L LE++H +VYRDLKP N+L+ + GH+ +S DL L C S
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFS 343
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 75/128 (58%), Gaps = 17/128 (13%)
Query: 327 VGTHEYLAPEII-RGEGHGSAVDWWTFGIFLYELLHGTTPF-------KGQGNRATLFNV 378
VGTH Y+APE++ +G + S+ DW++ G L++LL G +PF K + +R TL
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 379 VGQPLRFPETPQVSFVARDLIRGLLVKEPHKRI-AYKRGATEIKQHPFFEGVNWALV--R 435
V P F +P++ R L+ GLL ++ ++R+ RGA E+K+ PFF ++W +V +
Sbjct: 411 VELPDSF--SPEL----RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 464
Query: 436 SALPPHIP 443
PP IP
Sbjct: 465 KYPPPLIP 472
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 89/163 (54%), Gaps = 9/163 (5%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ +++F + + +G G G VY T +AMK +DK + + A ER +L L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 151 L---DHPFLPTLYSYFETDKFYCLVMEFCSGGNLH-SLRQKQPNKYFTEDAARFFASEVL 206
+ D PF+ + F T +++ +GG+LH L Q + F+E RF+A+E++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEII 302
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVS 249
L LE++H +VYRDLKP N+L+ + GH+ +S DL L C S
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFS 343
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 75/128 (58%), Gaps = 17/128 (13%)
Query: 327 VGTHEYLAPEII-RGEGHGSAVDWWTFGIFLYELLHGTTPF-------KGQGNRATLFNV 378
VGTH Y+APE++ +G + S+ DW++ G L++LL G +PF K + +R TL
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 379 VGQPLRFPETPQVSFVARDLIRGLLVKEPHKRI-AYKRGATEIKQHPFFEGVNWALV--R 435
V P F +P++ R L+ GLL ++ ++R+ RGA E+K+ PFF ++W +V +
Sbjct: 411 VELPDSF--SPEL----RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 464
Query: 436 SALPPHIP 443
PP IP
Sbjct: 465 KYPPPLIP 472
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 89/163 (54%), Gaps = 9/163 (5%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ +++F + + +G G G VY T +AMK +DK + + A ER +L L
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 151 L---DHPFLPTLYSYFETDKFYCLVMEFCSGGNLH-SLRQKQPNKYFTEDAARFFASEVL 206
+ D PF+ + F T +++ +GG+LH L Q + F+E RF+A+E++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEII 302
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVS 249
L LE++H +VYRDLKP N+L+ + GH+ +S DL L C S
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFS 343
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 75/128 (58%), Gaps = 17/128 (13%)
Query: 327 VGTHEYLAPEII-RGEGHGSAVDWWTFGIFLYELLHGTTPF-------KGQGNRATLFNV 378
VGTH Y+APE++ +G + S+ DW++ G L++LL G +PF K + +R TL
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 379 VGQPLRFPETPQVSFVARDLIRGLLVKEPHKRI-AYKRGATEIKQHPFFEGVNWALV--R 435
V P F +P++ R L+ GLL ++ ++R+ RGA E+K+ PFF ++W +V +
Sbjct: 411 VELPDSF--SPEL----RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 464
Query: 436 SALPPHIP 443
PP IP
Sbjct: 465 KYPPPLIP 472
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 131/324 (40%), Gaps = 81/324 (25%)
Query: 89 PPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASL--ASRNKLLRAQTERE 146
P IG N+RLLK +G G+ V L T A++++DK L +S KL R E
Sbjct: 11 PHIG--NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR---EVR 65
Query: 147 ILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVL 206
I+ +L+HP + L+ ET+K LVME+ SGG + E A+F +++
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF--RQIV 123
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXX 266
A++Y H IV+RDLK EN+L+ + +I ++DF S + L
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL-------------- 169
Query: 267 XXXILNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSF 326
DE+ C P P + KK
Sbjct: 170 ------DEF----CGSPPYAAPELFQGKK------------------------------- 188
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFP 386
Y PE+ D W+ G+ LY L+ G+ PF GQ + V+ R P
Sbjct: 189 -----YDGPEV----------DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 233
Query: 387 ETPQVSFVARDLIRGLLVKEPHKR 410
+S +L++ L+ P KR
Sbjct: 234 --FYMSTDCENLLKKFLILNPSKR 255
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 139/345 (40%), Gaps = 92/345 (26%)
Query: 92 GLSN-FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
GLS+ ++ +K+LG G G V L + + T A+K++ K+S+ + + E +L
Sbjct: 18 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 77
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS---LRQKQPNKYFTEDAARFFASEVLL 207
LDHP + LY +FE + Y LVME GG L LRQK F+E A +VL
Sbjct: 78 LDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQVLS 132
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXX 267
Y L N++ RD L +L L L+K
Sbjct: 133 GTTY----------LHKHNIVHRD-----LKPENLLLESKSRDALIKIV----------- 166
Query: 268 XXILNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPC----VGGALPELMAEPTNVRS 323
DFG VGG + E +
Sbjct: 167 ----------------------------------DFGLSAHFEVGGKMKERL-------- 184
Query: 324 MSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPL 383
GT Y+APE++R + + D W+ G+ LY LL G PF GQ ++ L V
Sbjct: 185 ----GTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKF 239
Query: 384 RF--PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
F P+ QVS A+ L++ +L EP KRI+ A E HP+
Sbjct: 240 SFDPPDWTQVSDEAKQLVKLMLTYEPSKRIS----AEEALNHPWI 280
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 139/345 (40%), Gaps = 92/345 (26%)
Query: 92 GLSN-FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
GLS+ ++ +K+LG G G V L + + T A+K++ K+S+ + + E +L
Sbjct: 1 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS---LRQKQPNKYFTEDAARFFASEVLL 207
LDHP + LY +FE + Y LVME GG L LRQK F+E A +VL
Sbjct: 61 LDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQVLS 115
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXX 267
Y L N++ RD L +L L L+K
Sbjct: 116 GTTY----------LHKHNIVHRD-----LKPENLLLESKSRDALIKIV----------- 149
Query: 268 XXILNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPC----VGGALPELMAEPTNVRS 323
DFG VGG + E +
Sbjct: 150 ----------------------------------DFGLSAHFEVGGKMKERL-------- 167
Query: 324 MSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPL 383
GT Y+APE++R + + D W+ G+ LY LL G PF GQ ++ L V
Sbjct: 168 ----GTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKF 222
Query: 384 RF--PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
F P+ QVS A+ L++ +L EP KRI+ A E HP+
Sbjct: 223 SFDPPDWTQVSDEAKQLVKLMLTYEPSKRIS----AEEALNHPWI 263
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 82/151 (54%), Gaps = 1/151 (0%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
+ +F++ LG G VY E T A+K++DK ++ + R Q E +I L
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
HP + LY+YFE + LV+E C G ++ + + K F+E+ AR F +++ + YL
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYL 128
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
H GI++RDL N+L+ +I ++DF L+
Sbjct: 129 HSHGILHRDLTLSNLLLTRNMNIKIADFGLA 159
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 13/149 (8%)
Query: 278 HGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEI 337
HG + +L ++ +DFG +P + + + GT Y++PEI
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP-------HEKHYTLCGTPNYISPEI 183
Query: 338 IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARD 397
HG D W+ G Y LL G PF + TL VV P +S A+D
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSF--LSIEAKD 241
Query: 398 LIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
LI LL + P R++ + + HPF
Sbjct: 242 LIHQLLRRNPADRLS----LSSVLDHPFM 266
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 85/157 (54%), Gaps = 9/157 (5%)
Query: 89 PPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASL--ASRNKLLRAQTERE 146
P IG N+RLLK +G G+ V L T A+K++DK L +S KL R E
Sbjct: 11 PHIG--NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR---EVR 65
Query: 147 ILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVL 206
I+ +L+HP + L+ ET+K LVME+ SGG + E A+F +++
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF--RQIV 123
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
A++Y H IV+RDLK EN+L+ + +I ++DF S
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 325 SFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPL 383
+F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G+ PF GQ + V+
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 384 RFPETPQVSFVARDLIRGLLVKEPHKR 410
R P +S +L++ L+ P KR
Sbjct: 231 RIP--FYMSTDCENLLKKFLILNPSKR 255
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 89 PPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASL--ASRNKLLRAQTERE 146
P IG N+RLLK +G G+ V L T A+K++DK L S KL R E
Sbjct: 9 PHIG--NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR---EVR 63
Query: 147 ILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVL 206
I+ +L+HP + L+ ET+K L+ME+ SGG + E AR +++
Sbjct: 64 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIV 121
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTL 252
A++Y H IV+RDLK EN+L+ + +I ++DF S +V L
Sbjct: 122 SAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 167
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 325 SFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPL 383
+F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G+ PF GQ + V+
Sbjct: 169 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 228
Query: 384 RFPETPQVSFVARDLIRGLLVKEPHKR 410
R P +S +L++ LV P KR
Sbjct: 229 RIP--FYMSTDCENLLKRFLVLNPIKR 253
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 85/157 (54%), Gaps = 9/157 (5%)
Query: 89 PPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASL--ASRNKLLRAQTERE 146
P IG N+RLLK +G G+ V L T A+K++DK L +S KL R E
Sbjct: 11 PHIG--NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR---EVR 65
Query: 147 ILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVL 206
I+ +L+HP + L+ ET+K LVME+ SGG + E A+F +++
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF--RQIV 123
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
A++Y H IV+RDLK EN+L+ + +I ++DF S
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 325 SFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPL 383
+F G Y APE+ +G+ + G VD W+ G+ LY L+ G+ PF GQ + V+
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 384 RFPETPQVSFVARDLIRGLLVKEPHKR 410
R P +S +L++ L+ P KR
Sbjct: 231 RIP--FYMSTDCENLLKKFLILNPSKR 255
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 85/157 (54%), Gaps = 9/157 (5%)
Query: 89 PPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASL--ASRNKLLRAQTERE 146
P IG N+RLLK +G G+ V L T A+K++DK L +S KL R E
Sbjct: 11 PHIG--NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR---EVR 65
Query: 147 ILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVL 206
I+ +L+HP + L+ ET+K LVME+ SGG + E A+F +++
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF--RQIV 123
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
A++Y H IV+RDLK EN+L+ + +I ++DF S
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 325 SFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPL 383
+F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G+ PF GQ + V+
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 384 RFPETPQVSFVARDLIRGLLVKEPHKR 410
R P +S +L++ L+ P KR
Sbjct: 231 RIP--FYMSTDCENLLKKFLILNPSKR 255
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 89 PPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASL--ASRNKLLRAQTERE 146
P IG N+RLLK +G G+ V L T A+K++DK L S KL R E
Sbjct: 12 PHIG--NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR---EVR 66
Query: 147 ILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVL 206
I+ +L+HP + L+ ET+K L+ME+ SGG + E AR +++
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIV 124
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTL 252
A++Y H IV+RDLK EN+L+ + +I ++DF S +V L
Sbjct: 125 SAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 325 SFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPL 383
+F G Y APE+ +G+ + G VD W+ G+ LY L+ G+ PF GQ + V+
Sbjct: 172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 231
Query: 384 RFPETPQVSFVARDLIRGLLVKEPHKR 410
R P +S +L++ LV P KR
Sbjct: 232 RIP--FYMSTDCENLLKRFLVLNPIKR 256
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 84/153 (54%), Gaps = 7/153 (4%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASL--ASRNKLLRAQTEREILGL 150
+ N+RLLK +G G+ V L T A+K++DK L +S KL R E I+ +
Sbjct: 6 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR---EVRIMKV 62
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
L+HP + L+ ET+K LVME+ SGG + + + E AR +++ A++
Sbjct: 63 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGWMKEKEARAKFRQIVSAVQ 120
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
Y H IV+RDLK EN+L+ + +I ++DF S
Sbjct: 121 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 153
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 325 SFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPL 383
+F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G+ PF GQ + V+
Sbjct: 164 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 223
Query: 384 RFPETPQVSFVARDLIRGLLVKEPHKR 410
R P +S +L++ L+ P KR
Sbjct: 224 RIP--FYMSTDCENLLKKFLILNPSKR 248
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 2/152 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
+ +F +++ LG G G+VYL + A+KV+ K+ L + + E EI L
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
HP + +Y+YF K L++EF G L+ QK F E + F E+ AL Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYC 130
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSL 244
H +++RD+KPEN+L+ +G + ++DF S+
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSV 162
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 73/170 (42%), Gaps = 24/170 (14%)
Query: 276 AVHGCMQPSTFFPRILPSK-----KNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTH 330
A+H C + I P K +DFG V ++R GT
Sbjct: 126 ALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---------SLRRRXMCGTL 176
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQ 390
+YL PE+I G+ H VD W G+ YE L G PF + T +V L+FP P
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP--PF 234
Query: 391 VSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPP 440
+S ++DLI LL P +R+ K + +HP+ + A R LPP
Sbjct: 235 LSDGSKDLISKLLRYHPPQRLPLK----GVMEHPWVK----ANSRRVLPP 276
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Query: 89 PPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASL--ASRNKLLRAQTERE 146
P IG N+RL K +G G+ V L T A+K++DK L S KL R E
Sbjct: 12 PHIG--NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR---EVR 66
Query: 147 ILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVL 206
I+ +L+HP + L+ ET+K LVME+ SGG + E A+F +++
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF--RQIV 124
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTL 252
A++Y H IV+RDLK EN+L+ + +I ++DF S +V L
Sbjct: 125 SAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKL 170
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 325 SFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPL 383
+F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G+ PF GQ + V+
Sbjct: 172 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 231
Query: 384 RFP 386
R P
Sbjct: 232 RIP 234
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 9/157 (5%)
Query: 89 PPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASL--ASRNKLLRAQTERE 146
P IG N+RLLK +G G+ V L T A++++DK L +S KL R E
Sbjct: 11 PHIG--NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR---EVR 65
Query: 147 ILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVL 206
I+ +L+HP + L+ ET+K LVME+ SGG + E A+F +++
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF--RQIV 123
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
A++Y H IV+RDLK EN+L+ + +I ++DF S
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 325 SFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPL 383
+F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G+ PF GQ + V+
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 384 RFPETPQVSFVARDLIRGLLVKEPHKR 410
R P +S +L++ L+ P KR
Sbjct: 231 RIP--FYMSTDCENLLKKFLILNPSKR 255
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 7/153 (4%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGL 150
+ N++++K LG G G V L T A+K+++K LA + ++ + EREI L L
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD--MQGRIEREISYLRL 60
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
L HP + LY ++ +V+E+ + Q+ +E AR F +++ A+E
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVE 117
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
Y H IV+RDLKPEN+L+ + ++ ++DF LS
Sbjct: 118 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 150
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 328 GTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFP 386
G+ Y APE+I G+ + G VD W+ G+ LY +L PF + N+ P
Sbjct: 164 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 223
Query: 387 ETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
+ +S A LI+ +L+ P RI+ EI Q +F+
Sbjct: 224 KF--LSPGAAGLIKRMLIVNPLNRISIH----EIMQDDWFK 258
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 7/153 (4%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGL 150
+ N++++K LG G G V L T A+K+++K LA + ++ + EREI L L
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD--MQGRIEREISYLRL 70
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
L HP + LY ++ +V+E+ + Q+ +E AR F +++ A+E
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVE 127
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
Y H IV+RDLKPEN+L+ + ++ ++DF LS
Sbjct: 128 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 160
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 15/128 (11%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYEL 359
+DFG L +M + +++ G+ Y APE+I G+ + G VD W+ G+ LY +
Sbjct: 155 ADFG------LSNIMTDGNFLKTSC--GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVM 206
Query: 360 LHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATE 419
L PF + N+ P+ +S A LI+ +L+ P RI+ E
Sbjct: 207 LCRRLPFDDESIPVLFKNISNGVYTLPKF--LSPGAAGLIKRMLIVNPLNRISIH----E 260
Query: 420 IKQHPFFE 427
I Q +F+
Sbjct: 261 IMQDDWFK 268
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 7/153 (4%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGL 150
+ N++++K LG G G V L T A+K+++K LA + ++ + EREI L L
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD--MQGRIEREISYLRL 64
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
L HP + LY ++ +V+E+ + Q+ +E AR F +++ A+E
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVE 121
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
Y H IV+RDLKPEN+L+ + ++ ++DF LS
Sbjct: 122 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 154
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 15/128 (11%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYEL 359
+DFG L +M + +++ G+ Y APE+I G+ + G VD W+ G+ LY +
Sbjct: 149 ADFG------LSNIMTDGNFLKTSC--GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVM 200
Query: 360 LHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATE 419
L PF + N+ P+ +S A LI+ +L+ P RI+ E
Sbjct: 201 LCRRLPFDDESIPVLFKNISNGVYTLPKF--LSPGAAGLIKRMLIVNPLNRISIH----E 254
Query: 420 IKQHPFFE 427
I Q +F+
Sbjct: 255 IMQDDWFK 262
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 7/153 (4%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGL 150
+ N++++K LG G G V L T A+K+++K LA + ++ + EREI L L
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD--MQGRIEREISYLRL 69
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
L HP + LY ++ +V+E+ + Q+ +E AR F +++ A+E
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVE 126
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
Y H IV+RDLKPEN+L+ + ++ ++DF LS
Sbjct: 127 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 159
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 15/128 (11%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYEL 359
+DFG L +M + +++ G+ Y APE+I G+ + G VD W+ G+ LY +
Sbjct: 154 ADFG------LSNIMTDGNFLKTSC--GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVM 205
Query: 360 LHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATE 419
L PF + N+ P+ +S A LI+ +L+ P RI+ E
Sbjct: 206 LCRRLPFDDESIPVLFKNISNGVYTLPKF--LSPGAAGLIKRMLIVNPLNRISIH----E 259
Query: 420 IKQHPFFE 427
I Q +F+
Sbjct: 260 IMQDDWFK 267
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 84/158 (53%), Gaps = 20/158 (12%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLA--SRNKLLRAQTEREILGLLDH 153
++ +K+LG G G V L + T+ A+K++ K S++ S +KLL E +L LLDH
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE---EVAVLKLLDH 95
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNL-----HSLRQKQPNKYFTEDAARFFASEVLLA 208
P + LY +FE + Y LVME GG L H ++ F E A +VL
Sbjct: 96 PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK-------FNEVDAAVIIKQVLSG 148
Query: 209 LEYLHMLGIVYRDLKPENVLVRD---EGHIMLSDFDLS 243
+ YLH IV+RDLKPEN+L+ + I + DF LS
Sbjct: 149 VTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLS 186
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF- 385
+GT Y+APE++R + + D W+ G+ L+ LL G PF GQ ++ L V F
Sbjct: 199 LGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD 257
Query: 386 -PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
PE VS A+DLI+ +L + +RI+ A + +HP+ +
Sbjct: 258 SPEWKNVSEGAKDLIKQMLQFDSQRRIS----AQQALEHPWIK 296
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLA-----SRNKLLRAQTEREILGLLDHP 154
K LG G G V L R T A+K++ K A + L +TE EIL L+HP
Sbjct: 22 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 81
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+ + ++F+ + +Y +V+E GG L + NK E + + ++LLA++YLH
Sbjct: 82 CIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQYLHE 138
Query: 215 LGIVYRDLKPENVLV---RDEGHIMLSDF 240
GI++RDLKPENVL+ ++ I ++DF
Sbjct: 139 NGIIHRDLKPENVLLSSQEEDCLIKITDF 167
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 18/133 (13%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRG---EGHGSAVDWWTFGIFLY 357
+DFG +++ E + +R++ GT YLAPE++ G+ AVD W+ G+ L+
Sbjct: 165 TDFGH------SKILGETSLMRTL--CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 216
Query: 358 ELLHGTTPFKGQGNRATLFNVV--GQPLRFPET-PQVSFVARDLIRGLLVKEPHKRIAYK 414
L G PF + +L + + G+ PE +VS A DL++ LLV +P R
Sbjct: 217 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT-- 274
Query: 415 RGATEIKQHPFFE 427
E +HP+ +
Sbjct: 275 --TEEALRHPWLQ 285
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLA-----SRNKLLRAQTEREILGLLDHP 154
K LG G G V L R T A+K++ K A + L +TE EIL L+HP
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+ + ++F+ + +Y +V+E GG L + NK E + + ++LLA++YLH
Sbjct: 76 CIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 215 LGIVYRDLKPENVLV---RDEGHIMLSDF 240
GI++RDLKPENVL+ ++ I ++DF
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 18/133 (13%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRG---EGHGSAVDWWTFGIFLY 357
+DFG +++ E + +R++ GT YLAPE++ G+ AVD W+ G+ L+
Sbjct: 159 TDFGH------SKILGETSLMRTL--CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
Query: 358 ELLHGTTPFKGQGNRATLFNVV--GQPLRFPET-PQVSFVARDLIRGLLVKEPHKRIAYK 414
L G PF + +L + + G+ PE +VS A DL++ LLV +P R
Sbjct: 211 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT-- 268
Query: 415 RGATEIKQHPFFE 427
E +HP+ +
Sbjct: 269 --TEEALRHPWLQ 279
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLA-----SRNKLLRAQTEREILGLLDHP 154
K LG G G V L R T A+K++ K A + L +TE EIL L+HP
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+ + ++F+ + +Y +V+E GG L + NK E + + ++LLA++YLH
Sbjct: 76 CIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 215 LGIVYRDLKPENVLV---RDEGHIMLSDF 240
GI++RDLKPENVL+ ++ I ++DF
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 18/133 (13%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRG---EGHGSAVDWWTFGIFLY 357
+DFG +++ E + +R++ GT YLAPE++ G+ AVD W+ G+ L+
Sbjct: 159 TDFGH------SKILGETSLMRTL--CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
Query: 358 ELLHGTTPFKGQGNRATLFNVV--GQPLRFPET-PQVSFVARDLIRGLLVKEPHKRIAYK 414
L G PF + +L + + G+ PE +VS A DL++ LLV +P R
Sbjct: 211 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT-- 268
Query: 415 RGATEIKQHPFFE 427
E +HP+ +
Sbjct: 269 --TEEALRHPWLQ 279
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLA-----SRNKLLRAQTEREILGLLDHP 154
K LG G G V L R T A+K++ K A + L +TE EIL L+HP
Sbjct: 15 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 74
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+ + ++F+ + +Y +V+E GG L + NK E + + ++LLA++YLH
Sbjct: 75 CIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQYLHE 131
Query: 215 LGIVYRDLKPENVLV---RDEGHIMLSDF 240
GI++RDLKPENVL+ ++ I ++DF
Sbjct: 132 NGIIHRDLKPENVLLSSQEEDCLIKITDF 160
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 18/133 (13%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRG---EGHGSAVDWWTFGIFLY 357
+DFG +++ E + +R++ GT YLAPE++ G+ AVD W+ G+ L+
Sbjct: 158 TDFGH------SKILGETSLMRTL--CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 209
Query: 358 ELLHGTTPFKGQGNRATLFNVV--GQPLRFPET-PQVSFVARDLIRGLLVKEPHKRIAYK 414
L G PF + +L + + G+ PE +VS A DL++ LLV +P R
Sbjct: 210 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT-- 267
Query: 415 RGATEIKQHPFFE 427
E +HP+ +
Sbjct: 268 --TEEALRHPWLQ 278
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLA-----SRNKLLRAQTEREILGLLDHP 154
K LG G G V L R T A+K++ K A + L +TE EIL L+HP
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+ + ++F+ + +Y +V+E GG L + NK E + + ++LLA++YLH
Sbjct: 76 CIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 215 LGIVYRDLKPENVLV---RDEGHIMLSDF 240
GI++RDLKPENVL+ ++ I ++DF
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 18/133 (13%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRG---EGHGSAVDWWTFGIFLY 357
+DFG +++ E + +R++ GT YLAPE++ G+ AVD W+ G+ L+
Sbjct: 159 TDFGH------SKILGETSLMRTL--CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
Query: 358 ELLHGTTPFKGQGNRATLFNVV--GQPLRFPET-PQVSFVARDLIRGLLVKEPHKRIAYK 414
L G PF + +L + + G+ PE +VS A DL++ LLV +P R
Sbjct: 211 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT-- 268
Query: 415 RGATEIKQHPFFE 427
E +HP+ +
Sbjct: 269 --TEEALRHPWLQ 279
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 129/343 (37%), Gaps = 80/343 (23%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKAS----LASRNKLLRAQTEREILG 149
N+ + LG G V + T +A+K++D A + LR T +E+
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 150 LLD---HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVL 206
L HP + L +ET+ F+ LV + G L ++ +E R +L
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALL 134
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXX 266
+ LH L IV+RDLKPEN+L+ D+ +I L+DF S C + P
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDP---------------- 176
Query: 267 XXXILNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSF 326
E C PS P I+ N D P
Sbjct: 177 ------GEKLREVCGTPSYLAPEIIECSMN-----DNHP--------------------- 204
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF- 385
G+G VD W+ G+ +Y LL G+ PF + L ++ +F
Sbjct: 205 ---------------GYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG 249
Query: 386 -PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
PE S +DL+ LV +P KR A E HPFF+
Sbjct: 250 SPEWDDYSDTVKDLVSRFLVVQPQKRYT----AEEALAHPFFQ 288
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 81/152 (53%), Gaps = 8/152 (5%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
F ++ LG G V+LV+ R T FA+K + K S A R+ L + E +L + H
Sbjct: 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKK-SPAFRDSSL--ENEIAVLKKIKHE 66
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+ TL +E+ Y LVM+ SGG L + +TE A +VL A++YLH
Sbjct: 67 NIVTLEDIYESTTHYYLVMQLVSGGEL--FDRILERGVYTEKDASLVIQQVLSAVKYLHE 124
Query: 215 LGIVYRDLKPENVLV---RDEGHIMLSDFDLS 243
GIV+RDLKPEN+L + IM++DF LS
Sbjct: 125 NGIVHRDLKPENLLYLTPEENSKIMITDFGLS 156
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 19/172 (11%)
Query: 271 LNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTH 330
L++ VH ++P + P + ++ +DFG L ++ E + S + GT
Sbjct: 122 LHENGIVHRDLKPENLL-YLTPEENSKIMITDFG------LSKM--EQNGIMSTA-CGTP 171
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETP- 389
Y+APE++ + + AVD W+ G+ Y LL G PF + + LF + + E+P
Sbjct: 172 GYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFY-EETESKLFEKIKEGYYEFESPF 230
Query: 390 --QVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALP 439
+S A+D I LL K+P++R ++ + HP+ +G N AL R P
Sbjct: 231 WDDISESAKDFICHLLEKDPNERYTCEKALS----HPWIDG-NTALHRDIYP 277
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 121/319 (37%), Gaps = 80/319 (25%)
Query: 118 TNTYFAMKVMDKAS----LASRNKLLRAQTEREILGLLD---HPFLPTLYSYFETDKFYC 170
T +A+K++D A + LR T +E+ L HP + L +ET+ F+
Sbjct: 28 TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFF 87
Query: 171 LVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVR 230
LV + G L ++ +E R +L + LH L IV+RDLKPEN+L+
Sbjct: 88 LVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD 145
Query: 231 DEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILNDEYAVHGCMQPSTFFPRI 290
D+ +I L+DF S C + P E C PS P I
Sbjct: 146 DDMNIKLTDFGFS--CQLDP----------------------GEKLREVCGTPSYLAPEI 181
Query: 291 LPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWW 350
+ N D P G+G VD W
Sbjct: 182 IECSMN-----DNHP------------------------------------GYGKEVDMW 200
Query: 351 TFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF--PETPQVSFVARDLIRGLLVKEPH 408
+ G+ +Y LL G+ PF + L ++ +F PE S +DL+ LV +P
Sbjct: 201 STGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQ 260
Query: 409 KRIAYKRGATEIKQHPFFE 427
KR A E HPFF+
Sbjct: 261 KRYT----AEEALAHPFFQ 275
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 129/342 (37%), Gaps = 80/342 (23%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKAS----LASRNKLLRAQTEREILGL 150
N+ + LG G V + T +A+K++D A + LR T +E+ L
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 151 LD---HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
HP + L +ET+ F+ LV + G L ++ +E R +L
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALLE 135
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXX 267
+ LH L IV+RDLKPEN+L+ D+ +I L+DF S C + P
Sbjct: 136 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDP----------------- 176
Query: 268 XXILNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFV 327
E C PS P I+ N D P
Sbjct: 177 -----GEKLRSVCGTPSYLAPEIIECSMN-----DNHP---------------------- 204
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF-- 385
G+G VD W+ G+ +Y LL G+ PF + L ++ +F
Sbjct: 205 --------------GYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 250
Query: 386 PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
PE S +DL+ LV +P KR A E HPFF+
Sbjct: 251 PEWDDYSDTVKDLVSRFLVVQPQKRYT----AEEALAHPFFQ 288
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 127/335 (37%), Gaps = 80/335 (23%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF DA R V L LEY
Sbjct: 92 RHPNILRLYGYFH-------------------------------DATR-----VYLILEY 115
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXIL 271
LG VYR+L+ LS FD + L
Sbjct: 116 A-PLGTVYRELQ------------KLSKFDEQRTATYITELANALS------------YC 150
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
+ + +H ++P +L +DFG V P++ R+ + GT +
Sbjct: 151 HSKRVIHRDIKPEN----LLLGSAGELKIADFGWSVHA--------PSSRRT-TLCGTLD 197
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQV 391
YL PE+I G H VD W+ G+ YE L G PF+ + T + FP+ V
Sbjct: 198 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--V 255
Query: 392 SFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
+ ARDLI LL P +R + E+ +HP+
Sbjct: 256 TEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 286
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 130/337 (38%), Gaps = 78/337 (23%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ + ++ L LG G G V + E + T A+K++++ + S + + + + E + L L
Sbjct: 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKL 67
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
HP + LY T + +VME+ SGG L K E AR ++L A++
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAVD 125
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXI 270
Y H +V+RDLKPENVL+ + ++DF LS S
Sbjct: 126 YCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS----------------------- 162
Query: 271 LNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTH 330
+ E+ C P+ P ++ +
Sbjct: 163 -DGEFLRDSCGSPNYAAPEVISGRL----------------------------------- 186
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQ 390
Y PE+ D W+ G+ LY LL GT PF + + G PE
Sbjct: 187 -YAGPEV----------DIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLN 235
Query: 391 VSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
S L+ +L +P KR K +I++H +F+
Sbjct: 236 RSVAT--LLMHMLQVDPLKRATIK----DIREHEWFK 266
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 72/142 (50%), Gaps = 3/142 (2%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYS 161
LG G G V L T A+K + + L + +R + E L LL HP + LY
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 162 YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRD 221
T +V+E+ G + +K K TED R F +++ A+EY H IV+RD
Sbjct: 77 VITTPTDIVMVIEYAGGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRHKIVHRD 133
Query: 222 LKPENVLVRDEGHIMLSDFDLS 243
LKPEN+L+ D ++ ++DF LS
Sbjct: 134 LKPENLLLDDNLNVKIADFGLS 155
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 328 GTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFP 386
G+ Y APE+I G+ + G VD W+ GI LY +L G PF + LF V + +
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF-IPNLFKKVNSCV-YV 226
Query: 387 ETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
+S A+ LIR ++V +P +RI + EI++ P+F
Sbjct: 227 MPDFLSPGAQSLIRRMIVADPMQRITIQ----EIRRDPWF 262
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 2/152 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
+ +F + + LG G G+VYL + A+KV+ K+ L + + E EI L
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
HP + +Y+YF K L++EF G L+ QK F E + F E+ AL Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYC 130
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSL 244
H +++RD+KPEN+L+ +G + ++DF S+
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSV 162
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 73/170 (42%), Gaps = 24/170 (14%)
Query: 276 AVHGCMQPSTFFPRILPSK-----KNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTH 330
A+H C + I P K +DFG V ++R GT
Sbjct: 126 ALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---------SLRRRXMCGTL 176
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQ 390
+YL PE+I G+ H VD W G+ YE L G PF + T +V L+FP P
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP--PF 234
Query: 391 VSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPP 440
+S ++DLI LL P +R+ K + +HP+ + A R LPP
Sbjct: 235 LSDGSKDLISKLLRYHPPQRLPLK----GVMEHPWVK----ANSRRVLPP 276
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 2/152 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
+ +F + + LG G G+VYL + A+KV+ K+ L + + E EI L
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 73
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
HP + +Y+YF K L++EF G L+ QK F E + F E+ AL Y
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYC 131
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSL 244
H +++RD+KPEN+L+ +G + ++DF S+
Sbjct: 132 HERKVIHRDIKPENLLMGYKGELKIADFGWSV 163
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 73/170 (42%), Gaps = 24/170 (14%)
Query: 276 AVHGCMQPSTFFPRILPSK-----KNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTH 330
A+H C + I P K +DFG V ++R GT
Sbjct: 127 ALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---------SLRRRXMCGTL 177
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQ 390
+YL PE+I G+ H VD W G+ YE L G PF + T +V L+FP P
Sbjct: 178 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP--PF 235
Query: 391 VSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPP 440
+S ++DLI LL P +R+ K + +HP+ + A R LPP
Sbjct: 236 LSDGSKDLISKLLRYHPPQRLPLK----GVMEHPWVK----ANSRRVLPP 277
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 130/337 (38%), Gaps = 78/337 (23%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ + ++ L LG G G V + E + T A+K++++ + S + + + + E + L L
Sbjct: 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKL 67
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
HP + LY T + +VME+ SGG L K E AR ++L A++
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAVD 125
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXI 270
Y H +V+RDLKPENVL+ + ++DF LS S
Sbjct: 126 YCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS----------------------- 162
Query: 271 LNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTH 330
+ E+ C P+ P ++ +
Sbjct: 163 -DGEFLRTSCGSPNYAAPEVISGRL----------------------------------- 186
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQ 390
Y PE+ D W+ G+ LY LL GT PF + + G PE
Sbjct: 187 -YAGPEV----------DIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLN 235
Query: 391 VSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
S L+ +L +P KR K +I++H +F+
Sbjct: 236 RSVAT--LLMHMLQVDPLKRATIK----DIREHEWFK 266
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 83/157 (52%), Gaps = 9/157 (5%)
Query: 89 PPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASL--ASRNKLLRAQTERE 146
P IG N+RLLK +G G+ V L T A+K++DK L +S KL R E
Sbjct: 11 PHIG--NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR---EVR 65
Query: 147 ILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVL 206
I +L+HP + L+ ET+K LV E+ SGG + E A+F +++
Sbjct: 66 IXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF--RQIV 123
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
A++Y H IV+RDLK EN+L+ + +I ++DF S
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFS 160
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 325 SFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPL 383
+F G Y APE+ +G+ + G VD W+ G+ LY L+ G+ PF GQ + V+
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 384 RFPETPQVSFVARDLIRGLLVKEPHKR 410
R P +L++ L+ P KR
Sbjct: 231 RIPFYXSTD--CENLLKKFLILNPSKR 255
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 30/182 (16%)
Query: 88 GPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLAS------------- 134
G + L+ + L +G G G V L NTY+AMKV+ K L
Sbjct: 7 GDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGT 66
Query: 135 ----------RNKLLRAQTEREILGLLDHPFLPTLYSYFE---TDKFYCLVMEFCSGGNL 181
R + + E IL LDHP + L + D Y +V E + G +
Sbjct: 67 RPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLY-MVFELVNQGPV 125
Query: 182 HSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFD 241
+ +P +ED ARF+ +++ +EYLH I++RD+KP N+LV ++GHI ++DF
Sbjct: 126 MEVPTLKP---LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFG 182
Query: 242 LS 243
+S
Sbjct: 183 VS 184
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 327 VGTHEYLAPEII---RGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPL 383
VGT ++APE + R G A+D W G+ LY + G PF + + Q L
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQAL 257
Query: 384 RFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPF 425
FP+ P ++ +DLI +L K P RI EIK HP+
Sbjct: 258 EFPDQPDIAEDLKDLITRMLDKNPESRIV----VPEIKLHPW 295
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 127/335 (37%), Gaps = 80/335 (23%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF DA R V L LEY
Sbjct: 83 RHPNILRLYGYFH-------------------------------DATR-----VYLILEY 106
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXIL 271
LG VYR+L+ LS FD + L
Sbjct: 107 A-PLGTVYRELQK------------LSKFDEQRTATYITELANALS------------YC 141
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
+ + +H ++P +L +DFG V P++ R+ + GT +
Sbjct: 142 HSKRVIHRDIKPEN----LLLGSAGELKIADFGWSVHA--------PSSRRT-TLCGTLD 188
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQV 391
YL PE+I G H VD W+ G+ YE L G PF+ + T + FP+ V
Sbjct: 189 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--V 246
Query: 392 SFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
+ ARDLI LL P +R + E+ +HP+
Sbjct: 247 TEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 277
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 2/158 (1%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF L++E+ G ++ R+ Q F E + +E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVS 249
H +++RD+KPEN+L+ G + ++DF S+ S
Sbjct: 124 CHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 161
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 2/158 (1%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF L++E+ G ++ R+ Q F E + +E+ AL Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 149
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVS 249
H +++RD+KPEN+L+ G + ++DF S+ S
Sbjct: 150 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 187
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 77/151 (50%), Gaps = 7/151 (4%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
F + LG G V L E + T FA+K + K +L + + + E +L + H
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSI--ENEIAVLRKIKHEN 81
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHML 215
+ L +E+ LVM+ SGG L + ++TE A +VL A+ YLH +
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGEL--FDRIVEKGFYTEKDASTLIRQVLDAVYYLHRM 139
Query: 216 GIVYRDLKPENVLV---RDEGHIMLSDFDLS 243
GIV+RDLKPEN+L +E IM+SDF LS
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLS 170
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 12/126 (9%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF- 385
GT Y+APE++ + + AVD W+ G+ Y LL G PF + + ++ F
Sbjct: 183 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFD 242
Query: 386 -PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE 444
P +S A+D IR L+ K+P+KR ++ A +HP+ G +AL +I E
Sbjct: 243 SPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAA----RHPWIAG------DTALNKNIHE 292
Query: 445 PVDFSV 450
V +
Sbjct: 293 SVSAQI 298
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLA-----SRNKLLRAQTEREILGLLDHP 154
K LG G G V L R T A++++ K A + L +TE EIL L+HP
Sbjct: 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 200
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+ + ++F+ + +Y +V+E GG L + NK E + + ++LLA++YLH
Sbjct: 201 CIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQYLHE 257
Query: 215 LGIVYRDLKPENVLV---RDEGHIMLSDF 240
GI++RDLKPENVL+ ++ I ++DF
Sbjct: 258 NGIIHRDLKPENVLLSSQEEDCLIKITDF 286
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 18/133 (13%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRG---EGHGSAVDWWTFGIFLY 357
+DFG +++ E + +R++ GT YLAPE++ G+ AVD W+ G+ L+
Sbjct: 284 TDFGH------SKILGETSLMRTL--CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 335
Query: 358 ELLHGTTPFKGQGNRATLFNVV--GQPLRFPET-PQVSFVARDLIRGLLVKEPHKRIAYK 414
L G PF + +L + + G+ PE +VS A DL++ LLV +P R
Sbjct: 336 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT-- 393
Query: 415 RGATEIKQHPFFE 427
E +HP+ +
Sbjct: 394 --TEEALRHPWLQ 404
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 127/335 (37%), Gaps = 80/335 (23%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF DA R V L LEY
Sbjct: 69 RHPNILRLYGYFH-------------------------------DATR-----VYLILEY 92
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXIL 271
LG VYR+L+ LS FD + L
Sbjct: 93 A-PLGTVYRELQK------------LSKFDEQRTATYITELANALS------------YC 127
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
+ + +H ++P +L +DFG V P++ R+ + GT +
Sbjct: 128 HSKRVIHRDIKPEN----LLLGSAGELKIADFGWSVHA--------PSSRRT-TLCGTLD 174
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQV 391
YL PE+I G H VD W+ G+ YE L G PF+ + T + FP+ V
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--V 232
Query: 392 SFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
+ ARDLI LL P +R + E+ +HP+
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 263
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 127/335 (37%), Gaps = 80/335 (23%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF DA R V L LEY
Sbjct: 66 RHPNILRLYGYFH-------------------------------DATR-----VYLILEY 89
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXIL 271
LG VYR+L+ LS FD + L
Sbjct: 90 A-PLGTVYRELQK------------LSKFDEQRTATYITELANALS------------YC 124
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
+ + +H ++P +L +DFG V P++ R+ + GT +
Sbjct: 125 HSKRVIHRDIKPEN----LLLGSAGELKIADFGWSVHA--------PSSRRT-TLCGTLD 171
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQV 391
YL PE+I G H VD W+ G+ YE L G PF+ + T + FP+ V
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--V 229
Query: 392 SFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
+ ARDLI LL P +R + E+ +HP+
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 260
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 127/335 (37%), Gaps = 80/335 (23%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF DA R V L LEY
Sbjct: 71 RHPNILRLYGYFH-------------------------------DATR-----VYLILEY 94
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXIL 271
LG VYR+L+ LS FD + L
Sbjct: 95 A-PLGTVYRELQK------------LSKFDEQRTATYITELANALS------------YC 129
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
+ + +H ++P +L +DFG V P++ R+ + GT +
Sbjct: 130 HSKRVIHRDIKPEN----LLLGSAGELKIADFGWSVHA--------PSSRRT-TLCGTLD 176
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQV 391
YL PE+I G H VD W+ G+ YE L G PF+ + T + FP+ V
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--V 234
Query: 392 SFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
+ ARDLI LL P +R + E+ +HP+
Sbjct: 235 TEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 265
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLA-----SRNKLLRAQTEREILGLLDHP 154
K LG G G V L R T A++++ K A + L +TE EIL L+HP
Sbjct: 155 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 214
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+ + ++F+ + +Y +V+E GG L + NK E + + ++LLA++YLH
Sbjct: 215 CIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQYLHE 271
Query: 215 LGIVYRDLKPENVLV---RDEGHIMLSDF 240
GI++RDLKPENVL+ ++ I ++DF
Sbjct: 272 NGIIHRDLKPENVLLSSQEEDCLIKITDF 300
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 18/133 (13%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRG---EGHGSAVDWWTFGIFLY 357
+DFG +++ E + +R++ GT YLAPE++ G+ AVD W+ G+ L+
Sbjct: 298 TDFGH------SKILGETSLMRTL--CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 349
Query: 358 ELLHGTTPFKGQGNRATLFNVV--GQPLRFPET-PQVSFVARDLIRGLLVKEPHKRIAYK 414
L G PF + +L + + G+ PE +VS A DL++ LLV +P R
Sbjct: 350 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT-- 407
Query: 415 RGATEIKQHPFFE 427
E +HP+ +
Sbjct: 408 --TEEALRHPWLQ 418
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF L++E+ G ++ R+ Q F E + +E+ AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 128
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSL 244
H +++RD+KPEN+L+ G + ++DF S+
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 127/335 (37%), Gaps = 80/335 (23%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF DA R V L LEY
Sbjct: 69 RHPNILRLYGYFH-------------------------------DATR-----VYLILEY 92
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXIL 271
LG VYR+L+ LS FD + L
Sbjct: 93 A-PLGTVYRELQK------------LSKFDEQRTATYITELANALS------------YC 127
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
+ + +H ++P +L +DFG V P++ R+ + GT +
Sbjct: 128 HSKRVIHRDIKPEN----LLLGSAGELKIADFGWSVHA--------PSSRRA-ALCGTLD 174
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQV 391
YL PE+I G H VD W+ G+ YE L G PF+ + T + FP+ V
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--V 232
Query: 392 SFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
+ ARDLI LL P +R + E+ +HP+
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 263
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 127/335 (37%), Gaps = 80/335 (23%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF DA R V L LEY
Sbjct: 65 RHPNILRLYGYFH-------------------------------DATR-----VYLILEY 88
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXIL 271
LG VYR+L+ LS FD + L
Sbjct: 89 A-PLGTVYRELQK------------LSKFDEQRTATYITELANALSY------------C 123
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
+ + +H ++P +L +DFG V P++ R+ + GT +
Sbjct: 124 HSKRVIHRDIKPEN----LLLGSAGELKIADFGWSVHA--------PSSRRT-TLCGTLD 170
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQV 391
YL PE+I G H VD W+ G+ YE L G PF+ + T + FP+ V
Sbjct: 171 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--V 228
Query: 392 SFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
+ ARDLI LL P +R + E+ +HP+
Sbjct: 229 TEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 259
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF L++E+ G ++ R+ Q F E + +E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSL 244
H +++RD+KPEN+L+ G + ++DF S+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 127/335 (37%), Gaps = 80/335 (23%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF DA R V L LEY
Sbjct: 69 RHPNILRLYGYFH-------------------------------DATR-----VYLILEY 92
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXIL 271
LG VYR+L+ LS FD + L
Sbjct: 93 A-PLGTVYRELQK------------LSKFDEQRTATYITELANALSY------------C 127
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
+ + +H ++P +L +DFG V P++ R+ + GT +
Sbjct: 128 HSKRVIHRDIKPEN----LLLGSAGELKIADFGWSVHA--------PSSRRT-TLCGTLD 174
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQV 391
YL PE+I G H VD W+ G+ YE L G PF+ + T + FP+ V
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--V 232
Query: 392 SFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
+ ARDLI LL P +R + E+ +HP+
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 263
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 127/335 (37%), Gaps = 80/335 (23%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF DA R V L LEY
Sbjct: 70 RHPNILRLYGYFH-------------------------------DATR-----VYLILEY 93
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXIL 271
LG VYR+L+ LS FD + L
Sbjct: 94 A-PLGTVYRELQK------------LSKFDEQRTATYITELANALSY------------C 128
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
+ + +H ++P +L +DFG V P++ R+ + GT +
Sbjct: 129 HSKRVIHRDIKPEN----LLLGSAGELKIADFGWSVHA--------PSSRRT-TLCGTLD 175
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQV 391
YL PE+I G H VD W+ G+ YE L G PF+ + T + FP+ V
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--V 233
Query: 392 SFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
+ ARDLI LL P +R + E+ +HP+
Sbjct: 234 TEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 264
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 8/167 (4%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF L++E+ G ++ R+ Q F E + +E+ AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 124
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSL------RCSVSPTL 252
H +++RD+KPEN+L+ G + ++DF S R ++S TL
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTL 171
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 127/335 (37%), Gaps = 80/335 (23%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF DA R V L LEY
Sbjct: 66 RHPNILRLYGYFH-------------------------------DATR-----VYLILEY 89
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXIL 271
LG VYR+L+ LS FD + L
Sbjct: 90 A-PLGTVYRELQK------------LSKFDEQRTATYITELANALSY------------C 124
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
+ + +H ++P +L +DFG V P++ R+ + GT +
Sbjct: 125 HSKRVIHRDIKPEN----LLLGSAGELKIADFGWSVHA--------PSSRRA-ALCGTLD 171
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQV 391
YL PE+I G H VD W+ G+ YE L G PF+ + T + FP+ V
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--V 229
Query: 392 SFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
+ ARDLI LL P +R + E+ +HP+
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 260
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF L++E+ G ++ QK F E + +E+ AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYITELANALSY 128
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSL 244
H +++RD+KPEN+L+ G + ++DF S+
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF L++E+ G ++ R+ Q F E + +E+ AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 125
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSL 244
H +++RD+KPEN+L+ G + ++DF S+
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 158
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF L++E+ G ++ QK F E + +E+ AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYITELANALSY 128
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSL 244
H +++RD+KPEN+L+ G + ++DF S+
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 126/335 (37%), Gaps = 80/335 (23%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF DA R V L LEY
Sbjct: 71 RHPNILRLYGYFH-------------------------------DATR-----VYLILEY 94
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXIL 271
LG VYR+L+ LS FD + L
Sbjct: 95 A-PLGTVYRELQK------------LSKFDEQRTATYITELANALS------------YC 129
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
+ + +H ++P +L +DFG V P++ R+ GT +
Sbjct: 130 HSKRVIHRDIKPEN----LLLGSAGELKIADFGWSVHA--------PSSRRT-DLCGTLD 176
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQV 391
YL PE+I G H VD W+ G+ YE L G PF+ + T + FP+ V
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--V 234
Query: 392 SFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
+ ARDLI LL P +R + E+ +HP+
Sbjct: 235 TEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 265
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 126/335 (37%), Gaps = 80/335 (23%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF DA R V L LEY
Sbjct: 66 RHPNILRLYGYFH-------------------------------DATR-----VYLILEY 89
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXIL 271
LG VYR+L+ LS FD + L
Sbjct: 90 A-PLGTVYRELQK------------LSKFDEQRTATYITELANALS------------YC 124
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
+ + +H ++P +L +DFG V P++ R+ GT +
Sbjct: 125 HSKRVIHRDIKPEN----LLLGSAGELKIADFGWSVHA--------PSSRRT-DLCGTLD 171
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQV 391
YL PE+I G H VD W+ G+ YE L G PF+ + T + FP+ V
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--V 229
Query: 392 SFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
+ ARDLI LL P +R + E+ +HP+
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 260
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 126/335 (37%), Gaps = 80/335 (23%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF DA R V L LEY
Sbjct: 66 RHPNILRLYGYFH-------------------------------DATR-----VYLILEY 89
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXIL 271
LG VYR+L+ LS FD + L
Sbjct: 90 A-PLGTVYRELQK------------LSKFDEQRTATYITELANALS------------YC 124
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
+ + +H ++P +L +DFG V P++ R+ GT +
Sbjct: 125 HSKRVIHRDIKPEN----LLLGSAGELKIADFGWSVHA--------PSSRRT-DLCGTLD 171
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQV 391
YL PE+I G H VD W+ G+ YE L G PF+ + T + FP+ V
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--V 229
Query: 392 SFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
+ ARDLI LL P +R + E+ +HP+
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 260
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF L++E+ G ++ R+ Q F E + +E+ AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 124
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSL 244
H +++RD+KPEN+L+ G + ++DF S+
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 157
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF L++E+ G ++ R+ Q F E + +E+ AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 124
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSL 244
H +++RD+KPEN+L+ G + ++DF S+
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 157
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 2/158 (1%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF L++E+ G ++ R+ Q F E + +E+ AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 126
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVS 249
H +++RD+KPEN+L+ G + ++DF S+ S
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 164
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF L++E+ G ++ R+ Q F E + +E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSL 244
H +++RD+KPEN+L+ G + ++DF S+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF L++E+ G ++ R+ Q F E + +E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSL 244
H +++RD+KPEN+L+ G + ++DF S+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF L++E+ G ++ R+ Q F E + +E+ AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 126
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSL 244
H +++RD+KPEN+L+ G + ++DF S+
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 159
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 127/335 (37%), Gaps = 80/335 (23%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF DA R V L LEY
Sbjct: 68 RHPNILRLYGYFH-------------------------------DATR-----VYLILEY 91
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXIL 271
LG VYR+L+ LS FD + L
Sbjct: 92 A-PLGTVYRELQK------------LSKFDEQRTATYITELANALS------------YC 126
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
+ + +H ++P +L ++FG V P++ R+ + GT +
Sbjct: 127 HSKRVIHRDIKPEN----LLLGSAGELKIANFGWSVHA--------PSSRRT-TLCGTLD 173
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQV 391
YL PE+I G H VD W+ G+ YE L G PF+ + T + FP+ V
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--V 231
Query: 392 SFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
+ ARDLI LL P +R + E+ +HP+
Sbjct: 232 TEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 262
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 126/335 (37%), Gaps = 80/335 (23%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + A+KV+ KA L + + E EI L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF DA R V L LEY
Sbjct: 63 RHPNILRLYGYFH-------------------------------DATR-----VYLILEY 86
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXIL 271
LG VYR+L+ LS FD + L
Sbjct: 87 A-PLGTVYRELQK------------LSKFDEQRTATYITELANALSY------------C 121
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
+ + +H ++P +L +DFG V P++ R+ + GT +
Sbjct: 122 HSKRVIHRDIKPEN----LLLGSAGELKIADFGWSVHA--------PSSRRT-TLCGTLD 168
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQV 391
YL PE+I G H VD W+ G+ YE L G PF+ + T + FP+ V
Sbjct: 169 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--V 226
Query: 392 SFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
+ ARDLI LL P +R + E+ +HP+
Sbjct: 227 TEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 257
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 136/338 (40%), Gaps = 80/338 (23%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ + ++ L LG G G V + + T A+K++++ + S + + + + E + L L
Sbjct: 13 VKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKL 72
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
HP + LY T +VME+ SGG L K N E +R ++L ++
Sbjct: 73 FRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICK--NGRLDEKESRRLFQQILSGVD 130
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXI 270
Y H +V+RDLKPENVL+ + ++DF LS S
Sbjct: 131 YCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS----------------------- 167
Query: 271 LNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTH 330
+ E+ C P+ P + + G L
Sbjct: 168 -DGEFLRXSCGSPNYAAPEV----------------ISGRL------------------- 191
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQ 390
Y PE+ D W+ G+ LY LL GT PF + TLF + + + TPQ
Sbjct: 192 -YAGPEV----------DIWSSGVILYALLCGTLPF-DDDHVPTLFKKICDGIFY--TPQ 237
Query: 391 -VSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
++ L++ +L +P KR K +I++H +F+
Sbjct: 238 YLNPSVISLLKHMLQVDPMKRATIK----DIREHEWFK 271
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 127/335 (37%), Gaps = 80/335 (23%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
L +F + + LG G G+VYL + + A+KV+ KA L + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + LY YF DA R V L LEY
Sbjct: 69 RHPNILRLYGYFH-------------------------------DATR-----VYLILEY 92
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXIL 271
LG VYR+L+ LS FD + L
Sbjct: 93 A-PLGTVYRELQK------------LSKFDEQRTATYITELANALSY------------C 127
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
+ + +H ++P +L ++FG V P++ R+ + GT +
Sbjct: 128 HSKRVIHRDIKPEN----LLLGSAGELKIANFGWSVHA--------PSSRRT-TLCGTLD 174
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQV 391
YL PE+I G H VD W+ G+ YE L G PF+ + T + FP+ V
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF--V 232
Query: 392 SFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
+ ARDLI LL P +R + E+ +HP+
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLR----EVLEHPWI 263
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L +F + + LG G G+VYL R + A+KV+ K L + + E EI L
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
HP + LY YF L++E+ G ++ R+ Q F E + +E+ AL Y
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSRFDEQRTATYITELANALSYC 128
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSL 244
H +++RD+KPEN+L+ G + ++DF S+
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGWSV 160
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L +F + + LG G G+VYL R + A+KV+ K L + + E EI L
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
HP + LY YF L++E+ G ++ R+ Q F E + +E+ AL Y
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSRFDEQRTATYITELANALSYC 128
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSL 244
H +++RD+KPEN+L+ G + ++DF S+
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGWSV 160
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYS 161
LG G V L E + T A+K + K +L + + + E +L + HP + L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSM--ENEIAVLHKIKHPNIVALDD 83
Query: 162 YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRD 221
+E+ L+M+ SGG L R + Y DA+R +VL A++YLH LGIV+RD
Sbjct: 84 IYESGGHLYLIMQLVSGGELFD-RIVEKGFYTERDASRLIF-QVLDAVKYLHDLGIVHRD 141
Query: 222 LKPENVL---VRDEGHIMLSDFDLS 243
LKPEN+L + ++ IM+SDF LS
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGLS 166
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 271 LNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTH 330
L+D VH ++P L + ++ SDFG M +P +V S + GT
Sbjct: 132 LHDLGIVHRDLKPENLLYYSL-DEDSKIMISDFGLSK-------MEDPGSVLSTA-CGTP 182
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF--PET 388
Y+APE++ + + AVD W+ G+ Y LL G PF + + ++ F P
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
Query: 389 PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEG 428
+S A+D IR L+ K+P KR ++ QHP+ G
Sbjct: 243 DDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYS 161
LG G V L E + T A+K + K +L + + + E +L + HP + L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSM--ENEIAVLHKIKHPNIVALDD 83
Query: 162 YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRD 221
+E+ L+M+ SGG L R + Y DA+R +VL A++YLH LGIV+RD
Sbjct: 84 IYESGGHLYLIMQLVSGGELFD-RIVEKGFYTERDASRLIF-QVLDAVKYLHDLGIVHRD 141
Query: 222 LKPENVL---VRDEGHIMLSDFDLS 243
LKPEN+L + ++ IM+SDF LS
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGLS 166
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 271 LNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTH 330
L+D VH ++P L + ++ SDFG M +P +V S + GT
Sbjct: 132 LHDLGIVHRDLKPENLLYYSL-DEDSKIMISDFGLSK-------MEDPGSVLSTA-CGTP 182
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF--PET 388
Y+APE++ + + AVD W+ G+ Y LL G PF + + ++ F P
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
Query: 389 PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEG 428
+S A+D IR L+ K+P KR ++ QHP+ G
Sbjct: 243 DDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYS 161
LG G V L E + T A+K + K +L + + + E +L + HP + L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSM--ENEIAVLHKIKHPNIVALDD 83
Query: 162 YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRD 221
+E+ L+M+ SGG L R + Y DA+R +VL A++YLH LGIV+RD
Sbjct: 84 IYESGGHLYLIMQLVSGGELFD-RIVEKGFYTERDASRLIF-QVLDAVKYLHDLGIVHRD 141
Query: 222 LKPENVL---VRDEGHIMLSDFDLS 243
LKPEN+L + ++ IM+SDF LS
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGLS 166
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 271 LNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTH 330
L+D VH ++P L + ++ SDFG M +P +V S + GT
Sbjct: 132 LHDLGIVHRDLKPENLLYYSL-DEDSKIMISDFGLSK-------MEDPGSVLSTA-CGTP 182
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF--PET 388
Y+APE++ + + AVD W+ G+ Y LL G PF + + ++ F P
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
Query: 389 PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEG 428
+S A+D IR L+ K+P KR ++ QHP+ G
Sbjct: 243 DDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 127/334 (38%), Gaps = 78/334 (23%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L + L + +G G V L T A+K+MDK +L S L R +TE E L L
Sbjct: 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTEIEALKNLR 66
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
H + LY ET +V+E+C GG L Q +E+ R +++ A+ Y+
Sbjct: 67 HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR--LSEEETRVVFRQIVSAVAYV 124
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILN 272
H G +RDLKPEN+L + + L DF L C+ N
Sbjct: 125 HSQGYAHRDLKPENLLFDEYHKLKLIDFGL---CAKPKG--------------------N 161
Query: 273 DEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEY 332
+Y + C + A PEL ++ S++G
Sbjct: 162 KDYHLQTCCGSLAY-----------------------AAPEL------IQGKSYLG---- 188
Query: 333 LAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQVS 392
S D W+ GI LY L+ G PF A ++ P+ S
Sbjct: 189 ------------SEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPS 236
Query: 393 FVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
+ L++ +L +P KRI+ K + HP+
Sbjct: 237 SIL--LLQQMLQVDPKKRISMKN----LLNHPWI 264
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYS 161
LG G G V L + + T A+KV+ K + + E ++L LDHP + LY
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 117
Query: 162 YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLALEYLHMLGIVYR 220
+FE ++ LV E +GG L + K F+E DAAR +VL + Y+H IV+R
Sbjct: 118 FFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARII-RQVLSGITYMHKNKIVHR 174
Query: 221 DLKPENVLVRD---EGHIMLSDFDLSLRCSVSPTL 252
DLKPEN+L+ + +I + DF LS S +
Sbjct: 175 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 209
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF- 385
+GT Y+APE++ G + D W+ G+ LY LL G PF G L V F
Sbjct: 213 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 271
Query: 386 -PETPQVSFVARDLIRGLLVKEPHKRIAYK 414
P+ +VS A+DLIR +L P RI+ +
Sbjct: 272 LPQWKKVSESAKDLIRKMLTYVPSMRISAR 301
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 8/166 (4%)
Query: 86 LRGPPIGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLL 139
L+ P L + R +KR LG G Y + T FA KV+ K+ L ++
Sbjct: 28 LKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE 87
Query: 140 RAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAAR 199
+ TE I LD+P + + +FE D F +V+E C +L L +++ K TE AR
Sbjct: 88 KMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEAR 145
Query: 200 FFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLR 245
+F + + ++YLH +++RDLK N+ + D+ + + DF L+ +
Sbjct: 146 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATK 191
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ 381
R + GT Y+APE++ +GH VD W+ G LY LL G PF+ + T +
Sbjct: 198 RKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 382 PLRFPETPQVSFVARDLIRGLLVKEPHKR 410
P ++ VA LIR +L +P R
Sbjct: 258 EYSVPR--HINPVASALIRRMLHADPTLR 284
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYS 161
LG G G V L + + T A+KV+ K + + E ++L LDHP + LY
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 116
Query: 162 YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLALEYLHMLGIVYR 220
+FE ++ LV E +GG L + K F+E DAAR +VL + Y+H IV+R
Sbjct: 117 FFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARII-RQVLSGITYMHKNKIVHR 173
Query: 221 DLKPENVLVRD---EGHIMLSDFDLSLRCSVSPTL 252
DLKPEN+L+ + +I + DF LS S +
Sbjct: 174 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 208
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF- 385
+GT Y+APE++ G + D W+ G+ LY LL G PF G L V F
Sbjct: 212 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 270
Query: 386 -PETPQVSFVARDLIRGLLVKEPHKRIAYK 414
P+ +VS A+DLIR +L P RI+ +
Sbjct: 271 LPQWKKVSESAKDLIRKMLTYVPSMRISAR 300
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYS 161
LG G V L E + T A+K + K +L + + + E +L + HP + L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSM--ENEIAVLHKIKHPNIVALDD 83
Query: 162 YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRD 221
+E+ L+M+ SGG L R + Y DA+R +VL A++YLH LGIV+RD
Sbjct: 84 IYESGGHLYLIMQLVSGGELFD-RIVEKGFYTERDASRLIF-QVLDAVKYLHDLGIVHRD 141
Query: 222 LKPENVL---VRDEGHIMLSDFDLS 243
LKPEN+L + ++ IM+SDF LS
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGLS 166
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 271 LNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTH 330
L+D VH ++P L + ++ SDFG M +P +V S + GT
Sbjct: 132 LHDLGIVHRDLKPENLLYYSL-DEDSKIMISDFGLSK-------MEDPGSVLSTA-CGTP 182
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF--PET 388
Y+APE++ + + AVD W+ G+ Y LL G PF + + ++ F P
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
Query: 389 PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEG 428
+S A+D IR L+ K+P KR ++ QHP+ G
Sbjct: 243 DDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 8/166 (4%)
Query: 86 LRGPPIGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLL 139
L+ P L + R +KR LG G Y + T FA KV+ K+ L ++
Sbjct: 28 LKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE 87
Query: 140 RAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAAR 199
+ TE I LD+P + + +FE D F +V+E C +L L +++ K TE AR
Sbjct: 88 KMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEAR 145
Query: 200 FFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLR 245
+F + + ++YLH +++RDLK N+ + D+ + + DF L+ +
Sbjct: 146 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATK 191
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ 381
R GT Y+APE++ +GH VD W+ G LY LL G PF+ + T +
Sbjct: 198 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 382 PLRFPETPQVSFVARDLIRGLLVKEPHKR 410
P ++ VA LIR +L +P R
Sbjct: 258 EYSVPR--HINPVASALIRRMLHADPTLR 284
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 8/166 (4%)
Query: 86 LRGPPIGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLL 139
L+ P L + R +KR LG G Y + T FA KV+ K+ L ++
Sbjct: 28 LKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE 87
Query: 140 RAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAAR 199
+ TE I LD+P + + +FE D F +V+E C +L L +++ K TE AR
Sbjct: 88 KMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEAR 145
Query: 200 FFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLR 245
+F + + ++YLH +++RDLK N+ + D+ + + DF L+ +
Sbjct: 146 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATK 191
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ 381
R GT Y+APE++ +GH VD W+ G LY LL G PF+ + T +
Sbjct: 198 RKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 382 PLRFPETPQVSFVARDLIRGLLVKEPHKR 410
P ++ VA LIR +L +P R
Sbjct: 258 EYSVPR--HINPVASALIRRMLHADPTLR 284
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYS 161
LG G G V L + + T A+KV+ K + + E ++L LDHP + LY
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 162 YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLALEYLHMLGIVYR 220
+FE ++ LV E +GG L + K F+E DAAR +VL + Y+H IV+R
Sbjct: 100 FFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARII-RQVLSGITYMHKNKIVHR 156
Query: 221 DLKPENVLVRD---EGHIMLSDFDLSLRCSVSPTL 252
DLKPEN+L+ + +I + DF LS S +
Sbjct: 157 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 191
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 20/135 (14%)
Query: 295 KNRKSKSDFGPCVGGALPELMAEPTNVRSMSF---------------VGTHEYLAPEIIR 339
KN+ D P L E ++ N+R + F +GT Y+APE++
Sbjct: 150 KNKIVHRDLKP--ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH 207
Query: 340 GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF--PETPQVSFVARD 397
G + D W+ G+ LY LL G PF G L V F P+ +VS A+D
Sbjct: 208 GT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD 266
Query: 398 LIRGLLVKEPHKRIA 412
LIR +L P RI+
Sbjct: 267 LIRKMLTYVPSMRIS 281
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 8/166 (4%)
Query: 86 LRGPPIGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLL 139
L+ P L + R +KR LG G Y + T FA KV+ K+ L ++
Sbjct: 12 LKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE 71
Query: 140 RAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAAR 199
+ TE I LD+P + + +FE D F +V+E C +L L +++ K TE AR
Sbjct: 72 KMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEAR 129
Query: 200 FFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLR 245
+F + + ++YLH +++RDLK N+ + D+ + + DF L+ +
Sbjct: 130 YFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATK 175
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ 381
R GT Y+APE++ +GH VD W+ G LY LL G PF+ + T +
Sbjct: 182 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 241
Query: 382 PLRFPETPQVSFVARDLIRGLLVKEPHKR 410
P ++ VA LIR +L +P R
Sbjct: 242 EYSVPR--HINPVASALIRRMLHADPTLR 268
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYS 161
LG G G V L + + T A+KV+ K + + E ++L LDHP + LY
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 162 YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLALEYLHMLGIVYR 220
+FE ++ LV E +GG L + K F+E DAAR +VL + Y+H IV+R
Sbjct: 94 FFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARII-RQVLSGITYMHKNKIVHR 150
Query: 221 DLKPENVLVRD---EGHIMLSDFDLSLRCSVSPTL 252
DLKPEN+L+ + +I + DF LS S +
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 185
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 20/135 (14%)
Query: 295 KNRKSKSDFGPCVGGALPELMAEPTNVRSMSF---------------VGTHEYLAPEIIR 339
KN+ D P L E ++ N+R + F +GT Y+APE++
Sbjct: 144 KNKIVHRDLKP--ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH 201
Query: 340 GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF--PETPQVSFVARD 397
G + D W+ G+ LY LL G PF G L V F P+ +VS A+D
Sbjct: 202 G-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD 260
Query: 398 LIRGLLVKEPHKRIA 412
LIR +L P RI+
Sbjct: 261 LIRKMLTYVPSMRIS 275
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 4/150 (2%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
+ ++ LG G G VY + + T A KV++ S +L E EIL DHP+
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATCDHPY 69
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHML 215
+ L + D +++EFC GG + ++ + ++ TE + ++L AL +LH
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAI-MLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 216 GIVYRDLKPENVLVRDEGHIMLSDFDLSLR 245
I++RDLK NVL+ EG I L+DF +S +
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAK 158
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 325 SFVGTHEYLAPEIIRGEG-----HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVV 379
SF+GT ++APE++ E + D W+ GI L E+ P L +
Sbjct: 168 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA 227
Query: 380 GQ---PLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVN 430
L P V F RD ++ L K P R A ++ +HPF +
Sbjct: 228 KSDPPTLLTPSKWSVEF--RDFLKIALDKNPETR----PSAAQLLEHPFVSSIT 275
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 8/149 (5%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
F +L++LG G GSVY + T A+K + + L E I+ D P
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIK-----QVPVESDLQEIIKEISIMQQCDSPH 85
Query: 156 LPTLY-SYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+ Y SYF+ + +VME+C G++ + + + NK TED L LEYLH
Sbjct: 86 VVKYYGSYFKNTDLW-IVMEYCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHF 143
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++RD+K N+L+ EGH L+DF ++
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVA 172
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 16/139 (11%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
IL + + +DFG V G L + MA+ V +GT ++APE+I+ G+ D
Sbjct: 156 ILLNTEGHAKLADFG--VAGQLTDXMAKRNXV-----IGTPFWMAPEVIQEIGYNCVADI 208
Query: 350 WTFGIFLYELLHGTTPFKGQGNRATLFNVVGQP---LRFPETPQVSFVARDLIRGLLVKE 406
W+ GI E+ G P+ +F + P R PE +F D ++ LVK
Sbjct: 209 WSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFT--DFVKQCLVKS 266
Query: 407 PHKRIAYKRGATEIKQHPF 425
P +R AT++ QHPF
Sbjct: 267 PEQRAT----ATQLLQHPF 281
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYS 161
LG G G V L + + T A+KV+ K + + E ++L LDHP + LY
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE 93
Query: 162 YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLALEYLHMLGIVYR 220
+FE ++ LV E +GG L + K F+E DAAR +VL + Y H IV+R
Sbjct: 94 FFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARII-RQVLSGITYXHKNKIVHR 150
Query: 221 DLKPENVLVRD---EGHIMLSDFDLS 243
DLKPEN+L+ + +I + DF LS
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLS 176
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 58/135 (42%), Gaps = 20/135 (14%)
Query: 295 KNRKSKSDFGPCVGGALPELMAEPTNVRSMSF---------------VGTHEYLAPEIIR 339
KN+ D P L E ++ N+R + F +GT Y+APE++
Sbjct: 144 KNKIVHRDLKP--ENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLH 201
Query: 340 GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF--PETPQVSFVARD 397
G + D W+ G+ LY LL G PF G L V F P+ +VS A+D
Sbjct: 202 G-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD 260
Query: 398 LIRGLLVKEPHKRIA 412
LIR L P RI+
Sbjct: 261 LIRKXLTYVPSXRIS 275
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 4/150 (2%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
+ ++ LG G G VY + + T A KV++ S +L E EIL DHP+
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATCDHPY 77
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHML 215
+ L + D +++EFC GG + ++ + ++ TE + ++L AL +LH
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVDAI-MLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 216 GIVYRDLKPENVLVRDEGHIMLSDFDLSLR 245
I++RDLK NVL+ EG I L+DF +S +
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAK 166
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
Query: 325 SFVGTHEYLAPEIIRGEG-----HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVV 379
SF+GT ++APE++ E + D W+ GI L E+ P L +
Sbjct: 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA 235
Query: 380 GQ---PLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVN 430
L P V F RD ++ L K P R A ++ +HPF +
Sbjct: 236 KSDPPTLLTPSKWSVEF--RDFLKIALDKNPETR----PSAAQLLEHPFVSSIT 283
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 8/152 (5%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
+ ++ LG G G VY + + T+ A KV+D S +L E +IL DHP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPN 95
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNLHS--LRQKQPNKYFTEDAARFFASEVLLALEYLH 213
+ L F + +++EFC+GG + + L ++P TE + + L AL YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLH 152
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLSLR 245
I++RDLK N+L +G I L+DF +S +
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 322 RSMSFVGTHEYLAPEIIRGEG-----HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLF 376
R SF+GT ++APE++ E + D W+ GI L E+ P L
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 250
Query: 377 NVV-GQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPF 425
+ +P + + S +D ++ L K + + +++ QHPF
Sbjct: 251 KIAKSEPPTLAQPSRWSSNFKDFLKKCL----EKNVDARWTTSQLLQHPF 296
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 8/152 (5%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
+ ++ LG G G VY + + T+ A KV+D S +L E +IL DHP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPN 95
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNLHS--LRQKQPNKYFTEDAARFFASEVLLALEYLH 213
+ L F + +++EFC+GG + + L ++P TE + + L AL YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLH 152
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLSLR 245
I++RDLK N+L +G I L+DF +S +
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 322 RSMSFVGTHEYLAPEIIRGEG-----HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLF 376
R F+GT ++APE++ E + D W+ GI L E+ P L
Sbjct: 191 RRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 250
Query: 377 NVV-GQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPF 425
+ +P + + S +D ++ L K + + +++ QHPF
Sbjct: 251 KIAKSEPPTLAQPSRWSSNFKDFLKKCL----EKNVDARWTTSQLLQHPF 296
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 8/152 (5%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
+ ++ LG G G VY + + T+ A KV+D S +L E +IL DHP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPN 95
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNLHS--LRQKQPNKYFTEDAARFFASEVLLALEYLH 213
+ L F + +++EFC+GG + + L ++P TE + + L AL YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLH 152
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLSLR 245
I++RDLK N+L +G I L+DF +S +
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 322 RSMSFVGTHEYLAPEIIRGEG-----HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLF 376
R SF+GT ++APE++ E + D W+ GI L E+ P L
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 250
Query: 377 NVV-GQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPF 425
+ +P + + S +D ++ L K + + +++ QHPF
Sbjct: 251 KIAKSEPPTLAQPSRWSSNFKDFLKKCL----EKNVDARWTTSQLLQHPF 296
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 92 GLSNFR---------LLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLAS-RNKLLRA 141
G+S FR + + LG G V +GT +A K + K L+S R + R
Sbjct: 1 GMSTFRQEDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSRE 60
Query: 142 QTERE--ILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAAR 199
+ ERE IL + HP + TL+ FE L++E SGG L ++ + TED A
Sbjct: 61 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEAT 118
Query: 200 FFASEVLLALEYLHMLGIVYRDLKPENVLVRDEG----HIMLSDFDLS 243
F ++L + YLH I + DLKPEN+++ D+ I L DF ++
Sbjct: 119 QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT E++APEI+ E G D W+ G+ Y LL G +PF G+ + TL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 239
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRI 411
S +A+D IR LLVK+P +R+
Sbjct: 240 EYFSNTSELAKDFIRRLLVKDPKRRM 265
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLAS-RNKLLRAQTERE--ILGLL 151
++ + + LG G V +GT +A K + K L+S R + R + ERE IL +
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + TL+ FE L++E SGG L ++ + TED A F ++L + Y
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHY 123
Query: 212 LHMLGIVYRDLKPENVLVRDEG----HIMLSDFDLS 243
LH I + DLKPEN+++ D+ I L DF ++
Sbjct: 124 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT E++APEI+ E G D W+ G+ Y LL G +PF G+ + TL N+ F E
Sbjct: 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 232
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVR 435
S +A+D IR LLVK+P +R+ + +H + + + VR
Sbjct: 233 EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSL----EHSWIKAIRRRNVR 278
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 122/322 (37%), Gaps = 79/322 (24%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
N+ + + LG G V + T FA K+++ L++R+ + + E I L HP
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 64
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+ L+ + + F+ LV + +GG L ++++E A ++L ++ Y H
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 215 LGIVYRDLKPENVLVRDEGH---IMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXIL 271
GIV+R+LKPEN+L+ + + L+DF L++ +
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE-------------------------V 157
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
ND A HG F G PE++
Sbjct: 158 NDSEAWHG-----------------------FAGTPGYLSPEVL---------------- 178
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF--PETP 389
+ + + VD W G+ LY LL G PF + + + PE
Sbjct: 179 -------KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWD 231
Query: 390 QVSFVARDLIRGLLVKEPHKRI 411
V+ A+ LI +L P KRI
Sbjct: 232 TVTPEAKSLIDSMLTVNPKKRI 253
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 122/322 (37%), Gaps = 79/322 (24%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
N+ + + LG G V + T FA K+++ L++R+ + + E I L HP
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 65
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+ L+ + + F+ LV + +GG L ++++E A ++L ++ Y H
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 215 LGIVYRDLKPENVLVRDEGH---IMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXIL 271
GIV+R+LKPEN+L+ + + L+DF L++ +
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE-------------------------V 158
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
ND A HG F G PE++
Sbjct: 159 NDSEAWHG-----------------------FAGTPGYLSPEVL---------------- 179
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF--PETP 389
+ + + VD W G+ LY LL G PF + + + PE
Sbjct: 180 -------KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWD 232
Query: 390 QVSFVARDLIRGLLVKEPHKRI 411
V+ A+ LI +L P KRI
Sbjct: 233 TVTPEAKSLIDSMLTVNPKKRI 254
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 122/322 (37%), Gaps = 79/322 (24%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
N+ + + LG G V + T FA K+++ L++R+ + + E I L HP
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 65
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+ L+ + + F+ LV + +GG L ++++E A ++L ++ Y H
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 215 LGIVYRDLKPENVLVRDEGH---IMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXIL 271
GIV+R+LKPEN+L+ + + L+DF L++ +
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE-------------------------V 158
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
ND A HG F G PE++
Sbjct: 159 NDSEAWHG-----------------------FAGTPGYLSPEVL---------------- 179
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF--PETP 389
+ + + VD W G+ LY LL G PF + + + PE
Sbjct: 180 -------KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWD 232
Query: 390 QVSFVARDLIRGLLVKEPHKRI 411
V+ A+ LI +L P KRI
Sbjct: 233 TVTPEAKSLIDSMLTVNPKKRI 254
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASL-ASRNKLLRAQTERE--ILGLL 151
++ + + LG G V +GT +A K + K L +SR + R + ERE IL +
Sbjct: 27 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREI 86
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
HP + TL+ FE L++E SGG L ++ + TED A F ++L + Y
Sbjct: 87 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHY 144
Query: 212 LHMLGIVYRDLKPENVLVRDEG----HIMLSDFDLS 243
LH I + DLKPEN+++ D+ I L DF ++
Sbjct: 145 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT E++APEI+ E G D W+ G+ Y LL G +PF G+ + TL N+ F E
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 253
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRI 411
S +A+D IR LLVK+P +R+
Sbjct: 254 EYFSNTSELAKDFIRRLLVKDPKRRM 279
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 8/143 (5%)
Query: 105 GDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFE 164
GD G VY + + T+ A KV+D S +L E +IL DHP + L F
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFY 77
Query: 165 TDKFYCLVMEFCSGGNLHS--LRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDL 222
+ +++EFC+GG + + L ++P TE + + L AL YLH I++RDL
Sbjct: 78 YENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLHDNKIIHRDL 134
Query: 223 KPENVLVRDEGHIMLSDFDLSLR 245
K N+L +G I L+DF +S +
Sbjct: 135 KAGNILFTLDGDIKLADFGVSAK 157
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 322 RSMSFVGTHEYLAPEIIRGEG-----HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLF 376
R SF+GT ++APE++ E + D W+ GI L E+ P L
Sbjct: 165 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 224
Query: 377 NVV-GQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPF 425
+ +P + + S +D ++ L K + + +++ QHPF
Sbjct: 225 KIAKSEPPTLAQPSRWSSNFKDFLKKCL----EKNVDARWTTSQLLQHPF 270
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 74/153 (48%), Gaps = 8/153 (5%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
+ L +G G G V + +GT A K + K + + R + E EI+ LDHP
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVD---RFKQEIEIMKSLDHPN 67
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHML 215
+ LY FE + LVME C+GG L R + DAAR +VL A+ Y H L
Sbjct: 68 IIRLYETFEDNTDIYLVMELCTGGELFE-RVVHKRVFRESDAARIM-KDVLSAVAYCHKL 125
Query: 216 GIVYRDLKPENVLVRD---EGHIMLSDFDLSLR 245
+ +RDLKPEN L + + L DF L+ R
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFP 386
VGT Y++P+++ G +G D W+ G+ +Y LL G PF + + + FP
Sbjct: 169 VGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 227
Query: 387 ETP--QVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
E VS A LIR LL K P +RI + + +H +FE
Sbjct: 228 EKDWLNVSPQAESLIRRLLTKSPKQRIT----SLQALEHEWFE 266
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 84/167 (50%), Gaps = 16/167 (9%)
Query: 90 PIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVM-----DKASLASRNKLLRA--- 141
IG S F++ ++LG G G V L + + ++ A+KV+ DK + NK +
Sbjct: 33 KIGESYFKV-RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHE 91
Query: 142 --QTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAAR 199
E +L LDHP + L+ FE K++ LV EF GG L Q F E A
Sbjct: 92 EIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL--FEQIINRHKFDECDAA 149
Query: 200 FFASEVLLALEYLHMLGIVYRDLKPENVLVRDEG---HIMLSDFDLS 243
++L + YLH IV+RD+KPEN+L+ ++ +I + DF LS
Sbjct: 150 NIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQP--LR 384
+GT Y+APE+++ + + D W+ G+ +Y LL G PF GQ ++ + V
Sbjct: 209 LGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD 267
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKR 410
F + +S A++LI+ +L + +KR
Sbjct: 268 FNDWKNISDEAKELIKLMLTYDYNKR 293
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 77/152 (50%), Gaps = 11/152 (7%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDK-ASLASRNKLLRAQTERE--ILGLLDHPFL 156
+ LG G V + T +A K + K S ASR + R + ERE IL + HP +
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQPNKYFTEDAARFFASEVLLALEYLHML 215
TL+ +E L++E SGG L L QK+ +E+ A F ++L + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTK 134
Query: 216 GIVYRDLKPENVLVRDEG----HIMLSDFDLS 243
I + DLKPEN+++ D+ HI L DF L+
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVN--WALVR 435
Q S +A+D IR LLVKE KR+ + E +HP+ V+ A+VR
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDTQQAMVR 287
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 74/153 (48%), Gaps = 8/153 (5%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
+ L +G G G V + +GT A K + K + + R + E EI+ LDHP
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVD---RFKQEIEIMKSLDHPN 84
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHML 215
+ LY FE + LVME C+GG L R + DAAR +VL A+ Y H L
Sbjct: 85 IIRLYETFEDNTDIYLVMELCTGGELFE-RVVHKRVFRESDAARIM-KDVLSAVAYCHKL 142
Query: 216 GIVYRDLKPENVLVRD---EGHIMLSDFDLSLR 245
+ +RDLKPEN L + + L DF L+ R
Sbjct: 143 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 175
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFP 386
VGT Y++P+++ G +G D W+ G+ +Y LL G PF + + + FP
Sbjct: 186 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 244
Query: 387 ETP--QVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
E VS A LIR LL K P +RI + + +H +FE
Sbjct: 245 EKDWLNVSPQAESLIRRLLTKSPKQRIT----SLQALEHEWFE 283
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 12/154 (7%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNK--LLRAQTEREILGLLDH 153
+ ++ LG G G V + R T +A+KV++KAS +++ +LR E E+L LDH
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR---EVELLKKLDH 80
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLALEYL 212
P + L+ E + +V E +GG L K+ K F+E DAAR +V + Y+
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARII-KQVFSGITYM 137
Query: 213 HMLGIVYRDLKPENVLVRD---EGHIMLSDFDLS 243
H IV+RDLKPEN+L+ + I + DF LS
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 320 NVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVV 379
N + +GT Y+APE++RG + D W+ G+ LY LL GT PF G+ L V
Sbjct: 177 NTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVE 235
Query: 380 GQPLRF--PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
F P+ +S A+DLIR +L P RI AT+ +HP+ +
Sbjct: 236 TGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRIT----ATQCLEHPWIQ 281
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 12/154 (7%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNK--LLRAQTEREILGLLDH 153
+ ++ LG G G V + R T +A+KV++KAS +++ +LR E E+L LDH
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR---EVELLKKLDH 80
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLALEYL 212
P + L+ E + +V E +GG L K+ K F+E DAAR +V + Y+
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARII-KQVFSGITYM 137
Query: 213 HMLGIVYRDLKPENVLVRD---EGHIMLSDFDLS 243
H IV+RDLKPEN+L+ + I + DF LS
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 320 NVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVV 379
N + +GT Y+APE++RG + D W+ G+ LY LL GT PF G+ L V
Sbjct: 177 NTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVE 235
Query: 380 GQPLRF--PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
F P+ +S A+DLIR +L P RI AT+ +HP+ +
Sbjct: 236 TGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRIT----ATQCLEHPWIQ 281
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 12/154 (7%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNK--LLRAQTEREILGLLDH 153
+ ++ LG G G V + R T +A+KV++KAS +++ +LR E E+L LDH
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR---EVELLKKLDH 80
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLALEYL 212
P + L+ E + +V E +GG L K+ K F+E DAAR +V + Y+
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARII-KQVFSGITYM 137
Query: 213 HMLGIVYRDLKPENVLVRD---EGHIMLSDFDLS 243
H IV+RDLKPEN+L+ + I + DF LS
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 320 NVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVV 379
N + +GT Y+APE++RG + D W+ G+ LY LL GT PF G+ L V
Sbjct: 177 NTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVE 235
Query: 380 GQPLRF--PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
F P+ +S A+DLIR +L P RI AT+ +HP+ +
Sbjct: 236 TGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRIT----ATQCLEHPWIQ 281
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 77/151 (50%), Gaps = 10/151 (6%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
F + LG G VY + +GT +A+KV+ K K++R TE +L L HP
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVR--TEIGVLLRLSHPN 109
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHML 215
+ L FET LV+E +GG L + Y++E A ++L A+ YLH
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFD--RIVEKGYYSERDAADAVKQILEAVAYLHEN 167
Query: 216 GIVYRDLKPENVLVRD---EGHIMLSDFDLS 243
GIV+RDLKPEN+L + + ++DF LS
Sbjct: 168 GIVHRDLKPENLLYATPAPDAPLKIADFGLS 198
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 325 SFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQ-GNRATLFNVVGQPL 383
+ GT Y APEI+RG +G VD W+ GI Y LL G PF + G++ ++
Sbjct: 209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY 268
Query: 384 RF--PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEG 428
F P +VS A+DL+R L+V +P KR+ + QHP+ G
Sbjct: 269 YFISPWWDEVSLNAKDLVRKLIVLDPKKRLT----TFQALQHPWVTG 311
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 6/152 (3%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
+ ++ L++ LG G G V L R T A+K++D + ++ E I +L+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLN 62
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLALEY 211
H + Y + L +E+CSGG L + +P+ E DA RFF +++ + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFF-HQLMAGVVY 119
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
LH +GI +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 6/152 (3%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
+ ++ L++ LG G G V L R T A+K++D + ++ E I +L+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLN 63
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLALEY 211
H + Y + L +E+CSGG L + +P+ E DA RFF +++ + Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFF-HQLMAGVVY 120
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
LH +GI +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD--KASLASRNKLLRAQTEREILGL 150
+ ++ L++ LG G G V L R T A+K++D +A N + E I +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEIXINKM 60
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLAL 209
L+H + Y + L +E+CSGG L + +P+ E DA RFF +++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFF-HQLMAGV 117
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
YLH +GI +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 123/323 (38%), Gaps = 81/323 (25%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
N+ + + LG G V + T FA K+++ L++R+ + + E I L HP
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 88
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+ L+ + + F+ LV + +GG L ++++E A ++L ++ Y H
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 215 LGIVYRDLKPENVLVRDEGH---IMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXIL 271
GIV+R+LKPEN+L+ + + L+DF L++ +
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE-------------------------V 181
Query: 272 NDEYAVHG-CMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTH 330
ND A HG P P +L KK+ SK P ++
Sbjct: 182 NDSEAWHGFAGTPGYLSPEVL--KKDPYSK-----------------PVDI--------- 213
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF--PET 388
W G+ LY LL G PF + + + PE
Sbjct: 214 -------------------WACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW 254
Query: 389 PQVSFVARDLIRGLLVKEPHKRI 411
V+ A+ LI +L P KRI
Sbjct: 255 DTVTPEAKSLIDSMLTVNPKKRI 277
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 79/153 (51%), Gaps = 5/153 (3%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGL 150
+ + L+++G G G LV+ + +K ++ + ++S+ R ++ RE+ L
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKE---REESRREVAVLAN 79
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
+ HP + FE + +VM++C GG+L Q F ED + ++ LAL+
Sbjct: 80 MKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK 139
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++H I++RD+K +N+ + +G + L DF ++
Sbjct: 140 HVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIA 172
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFP 386
+GT YL+PEI + + + D W G LYEL F+ + + ++ P
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP-P 244
Query: 387 ETPQVSFVARDLIRGLLVKEPHKR 410
+ S+ R L+ L + P R
Sbjct: 245 VSLHYSYDLRSLVSQLFKRNPRDR 268
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD--KASLASRNKLLRAQTEREILGL 150
+ ++ L++ LG G G V L R T A+K++D +A N + E I +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEIXINKM 60
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLAL 209
L+H + Y + L +E+CSGG L + +P+ E DA RFF +++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFF-HQLMAGV 117
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
YLH +GI +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 7/153 (4%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
F ++LG G G V+LVE R + +K ++K S+ + + + E E+L LDHP
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKSLDHPN 81
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
+ ++ FE +VME C GG L + + K +E +++ AL Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 214 MLGIVYRDLKPENVLVRD---EGHIMLSDFDLS 243
+V++DLKPEN+L +D I + DF L+
Sbjct: 142 SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 30/135 (22%)
Query: 302 DFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLH 361
DFG L EL ++ S + GT Y+APE+ + + D W+ G+ +Y LL
Sbjct: 170 DFG------LAELF--KSDEHSTNAAGTALYMAPEVFKRDV-TFKCDIWSAGVVMYFLLT 220
Query: 362 GTTPFKGQG-----NRATL----FNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIA 412
G PF G +AT + V +PL TPQ A DL++ +L K+P +R +
Sbjct: 221 GCLPFTGTSLEEVQQKATYKEPNYAVECRPL----TPQ----AVDLLKQMLTKDPERRPS 272
Query: 413 YKRGATEIKQHPFFE 427
A ++ H +F+
Sbjct: 273 ----AAQVLHHEWFK 283
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVN--WALVR 435
Q S +A+D IR LLVKE KR+ + E +HP+ V+ A+VR
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVR 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 11/152 (7%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDK-ASLASRNKLLRAQTERE--ILGLLDHPFL 156
+ LG G V + T +A K + K S ASR + R + ERE IL + H +
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQPNKYFTEDAARFFASEVLLALEYLHML 215
TL+ +E L++E SGG L L QK+ +E+ A F ++L + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTK 134
Query: 216 GIVYRDLKPENVLVRDEG----HIMLSDFDLS 243
I + DLKPEN+++ D+ HI L DF L+
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD--KASLASRNKLLRAQTEREILGL 150
+ ++ L++ LG G G V L R T A+K++D +A N + E I +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEIXINKM 61
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLAL 209
L+H + Y + L +E+CSGG L + +P+ E DA RFF +++ +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFF-HQLMAGV 118
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
YLH +GI +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 6/152 (3%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
+ ++ L++ LG G G V L R T A+K++D + ++ E I +L+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLN 63
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLALEY 211
H + Y + L +E+CSGG L + +P+ E DA RFF +++ + Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFF-HQLMAGVVY 120
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
LH +GI +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 6/152 (3%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
+ ++ L++ LG G G V L R T A+K++D + ++ E I +L+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLN 63
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLALEY 211
H + Y + L +E+CSGG L + +P+ E DA RFF +++ + Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFF-HQLMAGVVY 120
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
LH +GI +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 6/152 (3%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
+ ++ L++ LG G G V L R T A+K++D + ++ E I +L+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLN 63
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLALEY 211
H + Y + L +E+CSGG L + +P+ E DA RFF +++ + Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFF-HQLMAGVVY 120
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
LH +GI +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVN--WALVR 435
Q S +A+D IR LLVKE KR+ + E +HP+ V+ A+VR
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVR 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 11/152 (7%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDK-ASLASRNKLLRAQTERE--ILGLLDHPFL 156
+ LG G V + T +A K + K S ASR + R + ERE IL + H +
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQPNKYFTEDAARFFASEVLLALEYLHML 215
TL+ +E L++E SGG L L QK+ +E+ A F ++L + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTK 134
Query: 216 GIVYRDLKPENVLVRDEG----HIMLSDFDLS 243
I + DLKPEN+++ D+ HI L DF L+
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 6/152 (3%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
+ ++ L++ LG G G V L R T A+K++D + ++ E I +L+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINAMLN 63
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLALEY 211
H + Y + L +E+CSGG L + +P+ E DA RFF +++ + Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFF-HQLMAGVVY 120
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
LH +GI +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD--KASLASRNKLLRAQTEREILGL 150
+ ++ L++ LG G G V L R T A+K++D +A N + E I +
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLAL 209
L+H + Y + L +E+CSGG L + +P+ E DA RFF +++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFF-HQLMAGV 117
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
YLH +GI +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD--KASLASRNKLLRAQTEREILGL 150
+ ++ L++ LG G G V L R T A+K++D +A N + E I +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLAL 209
L+H + Y + L +E+CSGG L + +P+ E DA RFF +++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFF-HQLMAGV 117
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
YLH +GI +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD--KASLASRNKLLRAQTEREILGL 150
+ ++ L++ LG G G V L R T A+K++D +A N + E I +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLAL 209
L+H + Y + L +E+CSGG L + +P+ E DA RFF +++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFF-HQLMAGV 117
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
YLH +GI +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD--KASLASRNKLLRAQTEREILGL 150
+ ++ L++ LG G G V L R T A+K++D +A N + E I +
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 59
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLAL 209
L+H + Y + L +E+CSGG L + +P+ E DA RFF +++ +
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFF-HQLMAGV 116
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
YLH +GI +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 117 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 150
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD--KASLASRNKLLRAQTEREILGL 150
+ ++ L++ LG G G V L R T A+K++D +A N + E I +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLAL 209
L+H + Y + L +E+CSGG L + +P+ E DA RFF +++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFF-HQLMAGV 117
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
YLH +GI +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD--KASLASRNKLLRAQTEREILGL 150
+ ++ L++ LG G G V L R T A+K++D +A N + E I +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 61
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLAL 209
L+H + Y + L +E+CSGG L + +P+ E DA RFF +++ +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFF-HQLMAGV 118
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
YLH +GI +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD--KASLASRNKLLRAQTEREILGL 150
+ ++ L++ LG G G V L R T A+K++D +A N + E I +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLAL 209
L+H + Y + L +E+CSGG L + +P+ E DA RFF +++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFF-HQLMAGV 117
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
YLH +GI +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD--KASLASRNKLLRAQTEREILGL 150
+ ++ L++ LG G G V L R T A+K++D +A N + E I +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLAL 209
L+H + Y + L +E+CSGG L + +P+ E DA RFF +++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFF-HQLMAGV 117
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
YLH +GI +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF--EGVNWALVRSA 437
S +A+D IR LLVK+P KR+ + QHP+ + AL R A
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIKPKDTQQALSRKA 288
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKA-SLASRNKLLRAQTERE--ILGLLDHPFL 156
+ LG G V + T +A K + K + +SR + R ERE IL + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLG 216
TL+ +E L++E +GG L ++ + TE+ A F ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 217 IVYRDLKPENVLVRDEG----HIMLSDFDLS 243
I + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD--KASLASRNKLLRAQTEREILGL 150
+ ++ L++ LG G G V L R T A+K++D +A N + E I +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLAL 209
L+H + Y + L +E+CSGG L + +P+ E DA RFF +++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFF-HQLMAGV 117
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
YLH +GI +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD--KASLASRNKLLRAQTEREILGL 150
+ ++ L++ LG G G V L R T A+K++D +A N + E I +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLAL 209
L+H + Y + L +E+CSGG L + +P+ E DA RFF +++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFF-HQLMAGV 117
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
YLH +GI +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF--EGVNWALVRSALPPHIP 443
S +A+D IR LLVK+P KR+ + QHP+ + AL R A ++
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIKPKDTQQALSRKASAVNME 294
Query: 444 EPVDFSVFAGK 454
+ F FA +
Sbjct: 295 K---FKKFAAR 302
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKA-SLASRNKLLRAQTERE--ILGLLDHPFL 156
+ LG G V + T +A K + K + +SR + R ERE IL + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLG 216
TL+ +E L++E +GG L ++ + TE+ A F ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 217 IVYRDLKPENVLVRDEG----HIMLSDFDLS 243
I + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD--KASLASRNKLLRAQTEREILGL 150
+ ++ L++ LG G G V L R T A+K++D +A N + E I +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 61
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLAL 209
L+H + Y + L +E+CSGG L + +P+ E DA RFF +++ +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFF-HQLMAGV 118
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
YLH +GI +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD--KASLASRNKLLRAQTEREILGL 150
+ ++ L++ LG G G V L R T A+K++D +A N + E I +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-DAARFFASEVLLAL 209
L+H + Y + L +E+CSGG L + +P+ E DA RFF +++ +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFF-HQLMAGV 117
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
YLH +GI +RD+KPEN+L+ + ++ +SDF L+
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 2/152 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
+ +F + + LG G G+VYL + ++ A+KV+ K+ + + + E EI L
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
HP + LY+YF + L++E+ G L+ QK F E E+ AL Y
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT--FDEQRTATIMEELADALMYC 139
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSL 244
H +++RD+KPEN+L+ +G + ++DF S+
Sbjct: 140 HGKKVIHRDIKPENLLLGLKGELKIADFGWSV 171
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 59/121 (48%), Gaps = 10/121 (8%)
Query: 320 NVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVV 379
++R + GT +YL PE+I G H VD W G+ YELL G PF+ + T +V
Sbjct: 175 SLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 234
Query: 380 GQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALP 439
L+FP + V A+DLI LL P +R+ ++ HP+ A R LP
Sbjct: 235 KVDLKFPAS--VPTGAQDLISKLLRHNPSERLPL----AQVSAHPWVR----ANSRRVLP 284
Query: 440 P 440
P
Sbjct: 285 P 285
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF--EGVNWALVRSA 437
S +A+D IR LLVK+P KR+ + QHP+ + AL R A
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIKPKDTQQALSRKA 288
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKA-SLASRNKLLRAQTERE--ILGLLDHPFL 156
+ LG G V + T +A K + K + +SR + R ERE IL + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLG 216
TL+ +E L++E +GG L ++ + TE+ A F ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 217 IVYRDLKPENVLVRDEG----HIMLSDFDLS 243
I + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 6/146 (4%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYS 161
LG G G V+ E T A K++ + + ++ + E ++ LDH L LY
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEV---KNEISVMNQLDHANLIQLYD 153
Query: 162 YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRD 221
FE+ LVME+ GG L R + TE F ++ + ++H + I++ D
Sbjct: 154 AFESKNDIVLVMEYVDGGELFD-RIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 222 LKPENVLV--RDEGHIMLSDFDLSLR 245
LKPEN+L RD I + DF L+ R
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLARR 238
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVG--QPLRF 385
GT E+LAPE++ + D W+ G+ Y LL G +PF G + TL N++ L
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED 309
Query: 386 PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
E +S A++ I LL+KE RI+ A+E +HP+
Sbjct: 310 EEFQDISEEAKEFISKLLIKEKSWRIS----ASEALKHPWL 346
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF--EGVNWALVRSA 437
S +A+D IR LLVK+P KR+ + QHP+ + AL R A
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIKPKDTQQALSRKA 288
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKA-SLASRNKLLRAQTERE--ILGLLDHPFL 156
+ LG G V + T +A K + K + +SR + R ERE IL + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLG 216
TL+ +E L++E +GG L ++ + TE+ A F ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 217 IVYRDLKPENVLVRDEG----HIMLSDFDLS 243
I + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
S +A+D IR LLVK+P KR+ + QHP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKA-SLASRNKLLRAQTERE--ILGLLDHPFL 156
+ LG G V + T +A K + K + +SR + R ERE IL + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLG 216
TL+ +E L++E +GG L ++ + TE+ A F ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 217 IVYRDLKPENVLVRDEG----HIMLSDFDLS 243
I + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF 385
+GT EYLAPEI+ + +A D W GI Y LL T+PF G+ N+ T N+ + +
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY 252
Query: 386 PET--PQVSFVARDLIRGLLVKEPHKR 410
E VS +A D I+ LLVK P KR
Sbjct: 253 SEETFSSVSQLATDFIQSLLVKNPEKR 279
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 92 GLSNFRLL--KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+NF +L K LG G V + T +A K + K R + RA+ EI
Sbjct: 25 NFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRR---RGQDCRAEILHEIAV 81
Query: 150 L---LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVL 206
L P + L+ +E L++E+ +GG + SL + + +E+ ++L
Sbjct: 82 LELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQIL 141
Query: 207 LALEYLHMLGIVYRDLKPENVLVRD---EGHIMLSDFDLS 243
+ YLH IV+ DLKP+N+L+ G I + DF +S
Sbjct: 142 EGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMS 181
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 27/163 (16%)
Query: 84 ISLRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQT 143
+ L+ P+G +F + ++ + + +N FA+K++ +K + A T
Sbjct: 12 LDLKDKPLGEGSFSICRKCVH-----------KKSNQAFAVKII--------SKRMEANT 52
Query: 144 EREILGLL---DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF 200
++EI L HP + L+ F LVME +GG L +K+ K+F+E A +
Sbjct: 53 QKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKK--KHFSETEASY 110
Query: 201 FASEVLLALEYLHMLGIVYRDLKPENVLVRDEG---HIMLSDF 240
+++ A+ ++H +G+V+RDLKPEN+L DE I + DF
Sbjct: 111 IMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDF 153
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 329 THEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPET 388
T Y APE++ G+ + D W+ G+ LY +L G PF+ T + V + +
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
Query: 389 ---------PQVSFVARDLIRGLLVKEPHKRI 411
VS A+DLI+GLL +P+KR+
Sbjct: 232 DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRL 263
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L ++ + + LG G G V+ V R T FA K + + + + + E + + +L
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRK---EIQTMSVLR 212
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
HP L L+ FE D ++ EF SGG L + NK +ED A + +V L ++
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHM 271
Query: 213 HMLGIVYRDLKPENVL--VRDEGHIMLSDFDLS 243
H V+ DLKPEN++ + + L DF L+
Sbjct: 272 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 304
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFP 386
GT E+ APE+ G+ G D W+ G+ Y LL G +PF G+ + TL NV
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 376
Query: 387 ETP--QVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
++ +S +D IR LL+ +P+ R+ + +HP+
Sbjct: 377 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQAL----EHPWL 414
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVN--WALVR 435
S +A+D IR LLVKE KR+ + E +HP+ V+ A+VR
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVR 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 11/152 (7%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDK-ASLASRNKLLRAQTERE--ILGLLDHPFL 156
+ LG G V + T +A K + K S ASR + R + ERE IL + H +
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQPNKYFTEDAARFFASEVLLALEYLHML 215
TL+ +E L++E SGG L L QK+ +E+ A F ++L + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTK 134
Query: 216 GIVYRDLKPENVLVRDEG----HIMLSDFDLS 243
I + DLKPEN+++ D+ HI L DF L+
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
S +A+D IR LLVK+P KR+ + QHP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKA-SLASRNKLLRAQTERE--ILGLLDHPFL 156
+ LG G V + T +A K + K + +SR + R ERE IL + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLG 216
TL+ +E L++E +GG L ++ + TE+ A F ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 217 IVYRDLKPENVLVRDEG----HIMLSDFDLS 243
I + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
S +A+D IR LLVK+P KR+ + QHP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKA-SLASRNKLLRAQTERE--ILGLLDHPFL 156
+ LG G V + T +A K + K + +SR + R ERE IL + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLG 216
TL+ +E L++E +GG L ++ + TE+ A F ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 217 IVYRDLKPENVLVRDEG----HIMLSDFDLS 243
I + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
S +A+D IR LLVK+P KR+ + QHP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKA-SLASRNKLLRAQTERE--ILGLLDHPFL 156
+ LG G V + T +A K + K + +SR + R ERE IL + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLG 216
TL+ +E L++E +GG L ++ + TE+ A F ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 217 IVYRDLKPENVLVRDEG----HIMLSDFDLS 243
I + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
S +A+D IR LLVK+P KR+ + QHP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKA-SLASRNKLLRAQTERE--ILGLLDHPFL 156
+ LG G V + T +A K + K + +SR + R ERE IL + HP +
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLG 216
TL+ +E L++E +GG L ++ + TE+ A F ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 217 IVYRDLKPENVLVRDEG----HIMLSDFDLS 243
I + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVN--WALVR 435
S +A+D IR LLVKE KR+ + E +HP+ V+ A+VR
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVR 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 11/152 (7%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDK-ASLASRNKLLRAQTERE--ILGLLDHPFL 156
+ LG G V + T +A K + K S ASR + R + ERE IL + H +
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQPNKYFTEDAARFFASEVLLALEYLHML 215
TL+ +E L++E SGG L L QK+ +E+ A F ++L + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTK 134
Query: 216 GIVYRDLKPENVLVRDEG----HIMLSDFDLS 243
I + DLKPEN+++ D+ HI L DF L+
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
S +A+D IR LLVK+P KR+ + QHP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKA-SLASRNKLLRAQTERE--ILGLLDHPFL 156
+ LG G V + T +A K + K + +SR + R ERE IL + HP +
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLG 216
TL+ +E L++E +GG L ++ + TE+ A F ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 217 IVYRDLKPENVLVRDEG----HIMLSDFDLS 243
I + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
S +A+D IR LLVK+P KR+ + QHP+ +
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 275
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKA-SLASRNKLLRAQTERE--ILGLLDHPFL 156
+ LG G V + T +A K + K + +SR + R ERE IL + HP +
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLG 216
TL+ +E L++E +GG L ++ + TE+ A F ++L + YLH L
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 133
Query: 217 IVYRDLKPENVLVRDEG----HIMLSDFDLS 243
I + DLKPEN+++ D I + DF L+
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
S +A+D IR LLVK+P KR+ + QHP+ +
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 275
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKA-SLASRNKLLRAQTERE--ILGLLDHPFL 156
+ LG G V + T +A K + K + +SR + R ERE IL + HP +
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLG 216
TL+ +E L++E +GG L ++ + TE+ A F ++L + YLH L
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 133
Query: 217 IVYRDLKPENVLVRDEG----HIMLSDFDLS 243
I + DLKPEN+++ D I + DF L+
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
S +A+D IR LLVK+P KR+ + QHP+ +
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKA-SLASRNKLLRAQTERE--ILGLLDHPFL 156
+ LG G V + T +A K + K + +SR + R ERE IL + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLG 216
TL+ +E L+ E +GG L ++ + TE+ A F ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILIGELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 217 IVYRDLKPENVLVRDEG----HIMLSDFDLS 243
I + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 6/153 (3%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
++L + LG G V T +A K+++ L++R+ + + E I LL HP
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ-KLEREARICRLLKHP 63
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+ L+ + F+ LV + +GG L +Y++E A ++L ++ + H+
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 215 LGIVYRDLKPENVLVRDEGH---IMLSDFDLSL 244
GIV+RDLKPEN+L+ + + L+DF L++
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF 385
F GT YL+PE++R + +G VD W G+ LY LL G PF + + F
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 225
Query: 386 --PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPP--H 441
PE V+ A+DLI +L P KRI A+E +HP W RS + H
Sbjct: 226 PSPEWDTVTPEAKDLINKMLTINPAKRIT----ASEALKHP------WICQRSTVASMMH 275
Query: 442 IPEPVD 447
E VD
Sbjct: 276 RQETVD 281
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT E++APEI+ E G D W+ G+ Y LL G +PF G + TL N+ F E
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVN--WALVR 435
S +A+D IR LLVKE KR+ + E +HP+ V+ A+VR
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRLTIQ----EALRHPWITPVDNQQAMVR 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 11/152 (7%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDK-ASLASRNKLLRAQTERE--ILGLLDHPFL 156
+ LG G V + T +A K + K S ASR + R + ERE IL + H +
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQPNKYFTEDAARFFASEVLLALEYLHML 215
TL+ +E L++E SGG L L QK+ +E+ A F ++L + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTK 134
Query: 216 GIVYRDLKPENVLVRDEG----HIMLSDFDLS 243
I + DLKPEN+++ D+ HI L DF L+
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 4/158 (2%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L ++ + + LG G G V+ V R T FA K + + + + + E + + +L
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRK---EIQTMSVLR 106
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
HP L L+ FE D ++ EF SGG L + NK +ED A + +V L ++
Sbjct: 107 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHM 165
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSP 250
H V+ DLKPEN++ + L D L + P
Sbjct: 166 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 203
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFP 386
GT E+ APE+ G+ G D W+ G+ Y LL G +PF G+ + TL NV
Sbjct: 211 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 270
Query: 387 ETP--QVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
++ +S +D IR LL+ +P+ R+ + +HP+
Sbjct: 271 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQAL----EHPWL 308
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 6/153 (3%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
++L + LG G V T +A K+++ L++R+ + + E I LL HP
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ-KLEREARICRLLKHP 63
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+ L+ + F+ LV + +GG L +Y++E A ++L ++ + H+
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 215 LGIVYRDLKPENVLVRDEGH---IMLSDFDLSL 244
GIV+RDLKPEN+L+ + + L+DF L++
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF 385
F GT YL+PE++R + +G VD W G+ LY LL G PF + + F
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 225
Query: 386 --PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPP--H 441
PE V+ A+DLI +L P KRI A+E +HP W RS + H
Sbjct: 226 PSPEWDTVTPEAKDLINKMLTINPAKRIT----ASEALKHP------WICQRSTVASMMH 275
Query: 442 IPEPVD 447
E VD
Sbjct: 276 RQETVD 281
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTERE--ILGLLDH 153
+ L + +G G V R T FA+K++D A S L +RE I +L H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAARFFASEVLLALEY 211
P + L + +D +V EF G +L +++ ++E A + ++L AL Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 212 LHMLGIVYRDLKPENVLV---RDEGHIMLSDFDLSLR 245
H I++RD+KPENVL+ + + L DF ++++
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQ 182
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFP 386
VGT ++APE+++ E +G VD W G+ L+ LL G PF G R + G+ P
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP 253
Query: 387 -ETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPEP 445
+ +S A+DL+R +L+ +P +RI E HP+ + + R A H+PE
Sbjct: 254 RQWSHISESAKDLVRRMLMLDPAERIT----VYEALNHPWLKERD----RYAYKIHLPET 305
Query: 446 VD 447
V+
Sbjct: 306 VE 307
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
GT ++APEI+ E G D W+ G+ Y LL G +PF G + TL NV F +
Sbjct: 179 GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 388 T--PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF--EGVNWALVRSA 437
S +A+D IR LLVK+P KR+ + QHP+ + AL R A
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIKPKDTQQALSRKA 288
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKA-SLASRNKLLRAQTERE--ILGLLDHPFL 156
+ LG G V + T +A K + K + +SR + R ERE IL + HP +
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLG 216
TL+ +E L++E +GG L ++ + TE+ A F ++L + YLH L
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 217 IVYRDLKPENVLVRDEG----HIMLSDFDLS 243
I + DLKPEN+++ D I + DF L+
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 26/178 (14%)
Query: 79 DAINMISLRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL 138
D I++ +LR P G+ F L++ +G G G VY T A+KVMD
Sbjct: 12 DEIDLSALRDPA-GI--FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD---------- 58
Query: 139 LRAQTEREILGLLD-------HPFLPTLYSYF------ETDKFYCLVMEFCSGGNLHSLR 185
+ E EI ++ H + T Y F D LVMEFC G++ L
Sbjct: 59 VTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI 118
Query: 186 QKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ E+ + E+L L +LH +++RD+K +NVL+ + + L DF +S
Sbjct: 119 KNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS 176
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAV-----DWWTFGIFLYELLHGTTPFKGQGNRATLF 376
R +F+GT ++APE+I + + A D W+ GI E+ G P LF
Sbjct: 185 RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF 244
Query: 377 NVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV-NWALVR 435
+ P ++ + S + I LVK +R A ++ +HPF N VR
Sbjct: 245 LIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPA----TEQLMKHPFIRDQPNERQVR 300
Query: 436 SALPPHI 442
L HI
Sbjct: 301 IQLKDHI 307
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 103/260 (39%), Gaps = 62/260 (23%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYS 161
LG G G V R T MK + + ++ L+ E +++ L+HP +
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLK---EVKVMRCLEHPNVLKFIG 74
Query: 162 YFETDKFYCLVMEFCSGGNLHSLRQKQPNKY-FTEDAARFFASEVLLALEYLHMLGIVYR 220
DK + E+ GG L + + ++Y +++ + FA ++ + YLH + I++R
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVS--FAKDIASGMAYLHSMNIIHR 132
Query: 221 DLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILNDEYAVHGC 280
DL N LVR+ +++++DF L+ ++ DE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLA-------------------------RLMVDEKT---- 163
Query: 281 MQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRG 340
QP P +K R + VG ++APE+I G
Sbjct: 164 -QPEGLRSLKKPDRKKR--------------------------YTVVGNPYWMAPEMING 196
Query: 341 EGHGSAVDWWTFGIFLYELL 360
+ VD ++FGI L E++
Sbjct: 197 RSYDEKVDVFSFGIVLCEII 216
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYS 161
LG G + + T FA K++ K+ L ++ + E I L H + +
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 162 YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRD 221
+FE + F +V+E C +L L +++ K TE AR++ +++L +YLH +++RD
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 166
Query: 222 LKPENVLVRDEGHIMLSDFDLSLR 245
LK N+ + ++ + + DF L+ +
Sbjct: 167 LKLGNLFLNEDLEVKIGDFGLATK 190
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ 381
R GT Y+APE++ +GH VD W+ G +Y LL G PF+ + T +
Sbjct: 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 256
Query: 382 PLRFPETPQVSFVARDLIRGLLVKEPHKR 410
P+ ++ VA LI+ +L +P R
Sbjct: 257 EYSIPK--HINPVAASLIQKMLQTDPTAR 283
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 118/314 (37%), Gaps = 77/314 (24%)
Query: 101 RLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLY 160
RLG G G V+ +E + T A+K + R ++ RA+ GL +P LY
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKV-------RLEVFRAEELMACAGLTSPRIVP-LY 151
Query: 161 SYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYR 220
+ + ME GG+L L ++Q ED A ++ + L LEYLH I++
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILHG 209
Query: 221 DLKPENVLVRDEG-HIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILNDEYAVHG 279
D+K +NVL+ +G H L DF +AV
Sbjct: 210 DVKADNVLLSSDGSHAALCDFG---------------------------------HAV-- 234
Query: 280 CMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIR 339
C+QP +L D+ P GT ++APE++
Sbjct: 235 CLQPDGLGKSLL--------TGDYIP----------------------GTETHMAPEVVL 264
Query: 340 GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPET-PQVSFVARDL 398
G + VD W+ + +L+G P+ + +P E P + +
Sbjct: 265 GRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQA 324
Query: 399 IRGLLVKEPHKRIA 412
I+ L KEP R++
Sbjct: 325 IQEGLRKEPIHRVS 338
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYS 161
LG G + + T FA K++ K+ L ++ + E I L H + +
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 162 YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRD 221
+FE + F +V+E C +L L +++ K TE AR++ +++L +YLH +++RD
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 146
Query: 222 LKPENVLVRDEGHIMLSDFDLSLR 245
LK N+ + ++ + + DF L+ +
Sbjct: 147 LKLGNLFLNEDLEVKIGDFGLATK 170
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ 381
R + GT Y+APE++ +GH VD W+ G +Y LL G PF+ + T +
Sbjct: 177 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 236
Query: 382 PLRFPETPQVSFVARDLIRGLLVKEPHKR 410
P+ ++ VA LI+ +L +P R
Sbjct: 237 EYSIPK--HINPVAASLIQKMLQTDPTAR 263
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYS 161
LG G + + T FA K++ K+ L ++ + E I L H + +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 162 YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRD 221
+FE + F +V+E C +L L +++ K TE AR++ +++L +YLH +++RD
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 222 LKPENVLVRDEGHIMLSDFDLSLR 245
LK N+ + ++ + + DF L+ +
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATK 166
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ 381
R + GT Y+APE++ +GH VD W+ G +Y LL G PF+ + T +
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 382 PLRFPETPQVSFVARDLIRGLLVKEPHKR 410
P+ ++ VA LI+ +L +P R
Sbjct: 233 EYSIPK--HINPVAASLIQKMLQTDPTAR 259
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYS 161
LG G + + T FA K++ K+ L ++ + E I L H + +
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 162 YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRD 221
+FE + F +V+E C +L L +++ K TE AR++ +++L +YLH +++RD
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 164
Query: 222 LKPENVLVRDEGHIMLSDFDLSLR 245
LK N+ + ++ + + DF L+ +
Sbjct: 165 LKLGNLFLNEDLEVKIGDFGLATK 188
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ 381
R GT Y+APE++ +GH VD W+ G +Y LL G PF+ + T +
Sbjct: 195 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 254
Query: 382 PLRFPETPQVSFVARDLIRGLLVKEPHKR 410
P+ ++ VA LI+ +L +P R
Sbjct: 255 EYSIPK--HINPVAASLIQKMLQTDPTAR 281
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYS 161
LG G + + T FA K++ K+ L ++ + E I L H + +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 162 YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRD 221
+FE + F +V+E C +L L +++ K TE AR++ +++L +YLH +++RD
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 222 LKPENVLVRDEGHIMLSDFDLSLR 245
LK N+ + ++ + + DF L+ +
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATK 166
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ 381
R + GT Y+APE++ +GH VD W+ G +Y LL G PF+ + T +
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 382 PLRFPETPQVSFVARDLIRGLLVKEPHKR 410
P+ ++ VA LI+ +L +P R
Sbjct: 233 EYSIPK--HINPVAASLIQKMLQTDPTAR 259
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 118/314 (37%), Gaps = 77/314 (24%)
Query: 101 RLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLY 160
RLG G G V+ +E + T A+K + R ++ RA+ GL +P LY
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKV-------RLEVFRAEELMACAGLTSPRIVP-LY 132
Query: 161 SYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYR 220
+ + ME GG+L L ++Q ED A ++ + L LEYLH I++
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILHG 190
Query: 221 DLKPENVLVRDEG-HIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILNDEYAVHG 279
D+K +NVL+ +G H L DF +AV
Sbjct: 191 DVKADNVLLSSDGSHAALCDFG---------------------------------HAV-- 215
Query: 280 CMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIR 339
C+QP +L D+ P GT ++APE++
Sbjct: 216 CLQPDGLGKDLL--------TGDYIP----------------------GTETHMAPEVVL 245
Query: 340 GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPET-PQVSFVARDL 398
G + VD W+ + +L+G P+ + +P E P + +
Sbjct: 246 GRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQA 305
Query: 399 IRGLLVKEPHKRIA 412
I+ L KEP R++
Sbjct: 306 IQEGLRKEPIHRVS 319
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 78/153 (50%), Gaps = 6/153 (3%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+++L + LG G V + +A K+++ L++R+ + + E I LL HP
Sbjct: 32 DYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ-KLEREARICRLLKHP 90
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+ L+ + F+ LV + +GG L +Y++E A ++L ++ ++H
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIHQILESVNHIHQ 148
Query: 215 LGIVYRDLKPENVLVRDE---GHIMLSDFDLSL 244
IV+RDLKPEN+L+ + + L+DF L++
Sbjct: 149 HDIVHRDLKPENLLLASKCKGAAVKLADFGLAI 181
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF 385
F GT YL+PE++R + +G VD W G+ LY LL G PF + + F
Sbjct: 193 FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDF 252
Query: 386 --PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPP--H 441
PE V+ A++LI +L P KRI A + +HP W RS + H
Sbjct: 253 PSPEWDTVTPEAKNLINQMLTINPAKRIT----ADQALKHP------WVCQRSTVASMMH 302
Query: 442 IPEPVD 447
E V+
Sbjct: 303 RQETVE 308
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYS 161
LG G + + T FA K++ K+ L ++ + E I L H + +
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 162 YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRD 221
+FE + F +V+E C +L L +++ K TE AR++ +++L +YLH +++RD
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 140
Query: 222 LKPENVLVRDEGHIMLSDFDLSLR 245
LK N+ + ++ + + DF L+ +
Sbjct: 141 LKLGNLFLNEDLEVKIGDFGLATK 164
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ 381
R GT Y+APE++ +GH VD W+ G +Y LL G PF+ + T +
Sbjct: 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 230
Query: 382 PLRFPETPQVSFVARDLIRGLLVKEPHKR 410
P+ ++ VA LI+ +L +P R
Sbjct: 231 EYSIPK--HINPVAASLIQKMLQTDPTAR 257
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 21/131 (16%)
Query: 122 FAMKVMDKASLASRNKLLR-------AQTEREILGLLDHPFLPTLYSYFETDKFYCLVME 174
+A+K+++K + SR+++ R Q + IL L++ +FE D + LV E
Sbjct: 41 YAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE---------FFEDDTRFYLVFE 91
Query: 175 FCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGH 234
GG++ + QKQ K+F E A +V AL++LH GI +RDLKPEN+L
Sbjct: 92 KLQGGSILAHIQKQ--KHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEK 149
Query: 235 ---IMLSDFDL 242
+ + DFDL
Sbjct: 150 VSPVKICDFDL 160
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 26/124 (20%)
Query: 327 VGTHEYLAPEII-----RGEGHGSAVDWWTFGIFLYELLHGTTPFKGQG------NRATL 375
G+ EY+APE++ + + D W+ G+ LY +L G PF G +R +
Sbjct: 182 CGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEV 241
Query: 376 FNVVGQPL---------RFPET--PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHP 424
V L FP+ +S A+DLI LLV++ +R++ A ++ QHP
Sbjct: 242 CRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLS----AAQVLQHP 297
Query: 425 FFEG 428
+ +G
Sbjct: 298 WVQG 301
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMD-KASLASRNKL--LRAQTERE---ILGLLDHPF 155
+G G V R T FA+K+M+ A S +L +R T RE + + HP
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHML 215
+ TL +E+ F LV + G L ++ +E R +L A+ +LH
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA--LSEKETRSIMRSLLEAVSFLHAN 219
Query: 216 GIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSP 250
IV+RDLKPEN+L+ D I LSDF S C + P
Sbjct: 220 NIVHRDLKPENILLDDNMQIRLSDFGFS--CHLEP 252
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 326 FVGTHEYLAPEIIRGE------GHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVV 379
GT YLAPEI++ G+G VD W G+ L+ LL G+ PF + L ++
Sbjct: 259 LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIM 318
Query: 380 GQPLRF--PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
+F PE S +DLI LL +P R+ A + QHPFFE
Sbjct: 319 EGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLT----AEQALQHPFFE 364
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 10/136 (7%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG--LLDH 153
+ L+K +G G+ G L+ + +N A+K ++ R + + A +REI+ L H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE------RGEKIAANVKREIINHRSLRH 74
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P + T +VME+ SGG L + F+ED ARFF +++ + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 214 MLGIVYRDLKPENVLV 229
+ + +RDLK EN L+
Sbjct: 133 AMQVCHRDLKLENTLL 148
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 325 SFVGTHEYLAPEII-RGEGHGSAVDWWTFGIFLYELLHGTTPFKG----QGNRATLFNVV 379
S VGT Y+APE++ + E G D W+ G+ LY +L G PF+ + R T+ ++
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 380 GQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
P+ +S R LI + V +P KRI+ EI+ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRIS----IPEIRNHEWF 277
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 6/153 (3%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
++L + +G G V T +A K+++ L++R+ + + E I LL H
Sbjct: 5 EYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQ-KLEREARICRLLKHS 63
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+ L+ + F+ LV + +GG L +Y++E A ++L A+ + H
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILEAVLHCHQ 121
Query: 215 LGIVYRDLKPENVLVRDE---GHIMLSDFDLSL 244
+G+V+RDLKPEN+L+ + + L+DF L++
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLAI 154
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 6/154 (3%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
S ++L + LG G V +A K+++ L++R+ + + E I LL H
Sbjct: 22 SMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQ-KLEREARICRLLKH 80
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P + L+ + + L+ + +GG L +Y++E A ++L A+ + H
Sbjct: 81 PNIVRLHDSISEEGHHYLIFDLVTGGEL--FEDIVAREYYSEADASHCIQQILEAVLHCH 138
Query: 214 MLGIVYRDLKPENVLVRDE---GHIMLSDFDLSL 244
+G+V+RDLKPEN+L+ + + L+DF L++
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAI 172
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 76/159 (47%), Gaps = 33/159 (20%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
IG+ ++ + KR + + TN FA+K++DK+ R TE EI L
Sbjct: 30 IGVGSYSVCKRCIH-----------KATNXEFAVKIIDKSK--------RDPTE-EIEIL 69
Query: 151 L---DHPFLPTLYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAARFFASEV 205
L HP + TL ++ K+ +V E GG L LRQK +F+E A +
Sbjct: 70 LRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQK----FFSEREASAVLFTI 125
Query: 206 LLALEYLHMLGIVYRDLKPENVLVRDEG----HIMLSDF 240
+EYLH G+V+RDLKP N+L DE I + DF
Sbjct: 126 TKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDF 164
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTP 365
C G +L AE + + + T ++APE++ +G+ +A D W+ G+ LY L G TP
Sbjct: 162 CDFGFAKQLRAENGLLXTPCY--TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
Query: 366 FKGQGNRATLFNVVGQ------PLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATE 419
F G T ++ + L VS A+DL+ L +PH+R+ A
Sbjct: 220 F-ANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLT----AAL 274
Query: 420 IKQHPFFEGVNW 431
+ +HP+ V+W
Sbjct: 275 VLRHPWI--VHW 284
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 7/161 (4%)
Query: 83 MISLRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQ 142
M +L+ P L F L+++G G G V+ T A+K++D + Q
Sbjct: 13 MQNLKADPEEL--FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE--DIQ 68
Query: 143 TEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFA 202
E +L D P++ Y + D ++ME+ GG+ L + P E
Sbjct: 69 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATIL 125
Query: 203 SEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
E+L L+YLH ++RD+K NVL+ + G + L+DF ++
Sbjct: 126 REILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA 166
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 20/158 (12%)
Query: 271 LNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTH 330
L+ E +H ++ + +L S+ +DFG V G L + T ++ FVGT
Sbjct: 135 LHSEKKIHRDIKAAN----VLLSEHGEVKLADFG--VAGQLTD-----TQIKRNXFVGTP 183
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQ 390
++APE+I+ + S D W+ GI EL G P LF + P P T +
Sbjct: 184 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI---PKNNPPTLE 240
Query: 391 VSFVA--RDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
++ ++ + L KEP +++ A E+ +H F
Sbjct: 241 GNYSKPLKEFVEACLNKEP----SFRPTAKELLKHKFI 274
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 76/159 (47%), Gaps = 33/159 (20%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
IG+ ++ + KR + + TN FA+K++DK+ R TE EI L
Sbjct: 30 IGVGSYSVCKRCIH-----------KATNMEFAVKIIDKSK--------RDPTE-EIEIL 69
Query: 151 L---DHPFLPTLYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAARFFASEV 205
L HP + TL ++ K+ +V E GG L LRQK +F+E A +
Sbjct: 70 LRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK----FFSEREASAVLFTI 125
Query: 206 LLALEYLHMLGIVYRDLKPENVLVRDEG----HIMLSDF 240
+EYLH G+V+RDLKP N+L DE I + DF
Sbjct: 126 TKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDF 164
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTP 365
C G +L AE N M+ T ++APE++ +G+ +A D W+ G+ LY +L G TP
Sbjct: 162 CDFGFAKQLRAE--NGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
Query: 366 FKGQGNRATLFNVVGQ------PLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATE 419
F G T ++ + L VS A+DL+ +L +PH+R+ A
Sbjct: 220 F-ANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLT----AAL 274
Query: 420 IKQHPFFEGVNW 431
+ +HP+ V+W
Sbjct: 275 VLRHPWI--VHW 284
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 64/136 (47%), Gaps = 18/136 (13%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL---DHPFLPT 158
+G G + TN +A+KV+DK+ + EI LL HP + T
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKS---------KRDPSEEIEILLRYGQHPNIIT 85
Query: 159 LYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLG 216
L ++ K LV E GG L LRQK +F+E A F + +EYLH G
Sbjct: 86 LKDVYDDGKHVYLVTELMRGGELLDKILRQK----FFSEREASFVLHTIGKTVEYLHSQG 141
Query: 217 IVYRDLKPENVLVRDE 232
+V+RDLKP N+L DE
Sbjct: 142 VVHRDLKPSNILYVDE 157
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTP 365
C G +L AE N M+ T ++APE+++ +G+ D W+ GI LY +L G TP
Sbjct: 167 CDFGFAKQLRAE--NGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
Query: 366 FKG--QGNRATLFNVVGQ---PLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEI 420
F + +G L VS A+DL+ +L +PH+R+ A ++
Sbjct: 225 FANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLT----AKQV 280
Query: 421 KQHPFFEGVNWALVRSALPPHIPEPVDFSVFAGKDQAS 458
QHP W + LP D + G A+
Sbjct: 281 LQHP------WVTQKDKLPQSQLSHQDLQLVKGAMAAT 312
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFP 386
T E+ APEI+ E G D W G+ Y LL G +PF G+ + TL NV F
Sbjct: 211 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD 270
Query: 387 ETP--QVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEG 428
E VS A+D I+ LL KEP KR+ + +HP+ +G
Sbjct: 271 EDAFSSVSPEAKDFIKNLLQKEPRKRLT----VHDALEHPWLKG 310
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 4/155 (2%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
+ +L+ LG G G V+ + T F K ++ + + + E I+ L HP
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTV---KNEISIMNQLHHPK 109
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHML 215
L L+ FE L++EF SGG L R + +E + + L+++H
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGELFD-RIAAEDYKMSEAEVINYMRQACEGLKHMHEH 168
Query: 216 GIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSP 250
IV+ D+KPEN++ + + D L ++P
Sbjct: 169 SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 77/195 (39%), Gaps = 52/195 (26%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRN--KLLRAQTEREILGLLDH 153
+ L +G G G V + T A+K+M+K + N + R +TE ++ L H
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNL-------------------------------- 181
P + LY +E +++ CLVME C GG+L
Sbjct: 88 PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE 147
Query: 182 -------HSLRQK----QPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVL-- 228
H R+ Q K + + F+ AL YLH GI +RD+KPEN L
Sbjct: 148 EAINGSIHGFRESLDFVQREKLISNIMRQIFS-----ALHYLHNQGICHRDIKPENFLFS 202
Query: 229 VRDEGHIMLSDFDLS 243
I L DF LS
Sbjct: 203 TNKSFEIKLVDFGLS 217
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Query: 328 GTHEYLAPEIIR--GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF 385
GT ++APE++ E +G D W+ G+ L+ LL G PF G + T+ V+ + L F
Sbjct: 236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF 295
Query: 386 --PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
P +S +ARDL+ LL + +R R QHP+
Sbjct: 296 ENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL----QHPWI 334
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 131/335 (39%), Gaps = 83/335 (24%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
S+F + LG G G V + Y+A+K + + KL +E +L L+H
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNH 61
Query: 154 PFLPTLYS-YFETDKF------------YCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF 200
++ Y+ + E F + ME+C G L+ L + ++ R
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 201 FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXX 260
F ++L AL Y+H GI++RDLKP N+ + + ++ + DF L+ S ++K
Sbjct: 122 F-RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK------ 174
Query: 261 XXXXXXXXXILNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTN 320
L S+ S + +G A+
Sbjct: 175 ------------------------------LDSQNLPGSSDNLTSAIGTAM--------- 195
Query: 321 VRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVV 379
Y+A E++ G GH +D ++ GI +E+++ PF R + +
Sbjct: 196 -----------YVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKL 241
Query: 380 -GQPLRFP---ETPQVSFVARDLIRGLLVKEPHKR 410
+ FP + ++ V + +IR L+ +P+KR
Sbjct: 242 RSVSIEFPPDFDDNKMK-VEKKIIRLLIDHDPNKR 275
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG--LLDH 153
+ L+K +G G+ G L+ + +N A+K +++ N +REI+ L H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN------VKREIINHRSLRH 74
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P + T +VME+ SGG L + F+ED ARFF +++ + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 214 MLGIVYRDLKPENVLV 229
+ + +RDLK EN L+
Sbjct: 133 AMQVCHRDLKLENTLL 148
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 325 SFVGTHEYLAPEII-RGEGHGSAVDWWTFGIFLYELLHGTTPFKG----QGNRATLFNVV 379
S VGT Y+APE++ + E G D W+ G+ LY +L G PF+ + R T+ ++
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 380 GQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
P+ +S R LI + V +P KRI+ EI+ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRIS----IPEIRNHEWF 277
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG--LLDH 153
+ L+K +G G+ G L+ + +N A+K +++ N +REI+ L H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN------VKREIINHRSLRH 74
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P + T +VME+ SGG L + F+ED ARFF +++ + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 214 MLGIVYRDLKPENVLV 229
+ + +RDLK EN L+
Sbjct: 133 AMQVCHRDLKLENTLL 148
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 327 VGTHEYLAPEII-RGEGHGSAVDWWTFGIFLYELLHGTTPFKG----QGNRATLFNVVGQ 381
VGT Y+APE++ + E G D W+ G+ LY +L G PF+ + R T+ ++
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 236
Query: 382 PLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
P+ +S R LI + V +P KRI+ EI+ H +F
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVADPAKRIS----IPEIRNHEWF 277
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG--LLDH 153
+ L+K +G G+ G L+ + +N A+K +++ N +REI+ L H
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN------VKREIINHRSLRH 73
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P + T +VME+ SGG L + F+ED ARFF +++ + Y H
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQLISGVSYCH 131
Query: 214 MLGIVYRDLKPENVLV 229
+ + +RDLK EN L+
Sbjct: 132 AMQVCHRDLKLENTLL 147
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 325 SFVGTHEYLAPEII-RGEGHGSAVDWWTFGIFLYELLHGTTPFKG----QGNRATLFNVV 379
S VGT Y+APE++ + E G D W+ G+ LY +L G PF+ + R T+ ++
Sbjct: 174 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 233
Query: 380 GQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
P+ +S R LI + V +P KRI+ EI+ H +F
Sbjct: 234 NVQYAIPDYVHISPECRHLISRIFVADPAKRIS----IPEIRNHEWF 276
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 64/136 (47%), Gaps = 18/136 (13%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL---DHPFLPT 158
+G G + TN +A+KV+DK+ + EI LL HP + T
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKS---------KRDPSEEIEILLRYGQHPNIIT 85
Query: 159 LYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLG 216
L ++ K LV E GG L LRQK +F+E A F + +EYLH G
Sbjct: 86 LKDVYDDGKHVYLVTELMRGGELLDKILRQK----FFSEREASFVLHTIGKTVEYLHSQG 141
Query: 217 IVYRDLKPENVLVRDE 232
+V+RDLKP N+L DE
Sbjct: 142 VVHRDLKPSNILYVDE 157
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTP 365
C G +L AE N M+ T ++APE+++ +G+ D W+ GI LY +L G TP
Sbjct: 167 CDFGFAKQLRAE--NGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
Query: 366 FKG--QGNRATLFNVVGQ---PLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEI 420
F + +G L VS A+DL+ +L +PH+R+ A ++
Sbjct: 225 FANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLT----AKQV 280
Query: 421 KQHPFFEGVNWALVRSALPPHIPEPVDFSVFAGKDQAS 458
QHP W + LP D + G A+
Sbjct: 281 LQHP------WVTQKDKLPQSQLSHQDLQLVKGAMAAT 312
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
F L+++G G G V+ T A+K++D + Q E +L D P+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE--DIQQEITVLSQCDSPY 66
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHML 215
+ Y + D ++ME+ GG+ L + P E E+L L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSE 123
Query: 216 GIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RD+K NVL+ + G + L+DF ++
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVA 151
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 20/158 (12%)
Query: 271 LNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTH 330
L+ E +H ++ + +L S+ +DFG V G L + T ++ +FVGT
Sbjct: 120 LHSEKKIHRDIKAAN----VLLSEHGEVKLADFG--VAGQLTD-----TQIKRNTFVGTP 168
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQ 390
++APE+I+ + S D W+ GI EL G P LF + P P T +
Sbjct: 169 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI---PKNNPPTLE 225
Query: 391 VSFVA--RDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
++ ++ + L KEP +++ A E+ +H F
Sbjct: 226 GNYSKPLKEFVEACLNKEP----SFRPTAKELLKHKFI 259
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
F L+++G G G V+ T A+K++D + Q E +L D P+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE--DIQQEITVLSQCDSPY 66
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHML 215
+ Y + D ++ME+ GG+ L + P E E+L L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSE 123
Query: 216 GIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RD+K NVL+ + G + L+DF ++
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVA 151
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 20/158 (12%)
Query: 271 LNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTH 330
L+ E +H ++ + +L S+ +DFG V G L + T ++ FVGT
Sbjct: 120 LHSEKKIHRDIKAAN----VLLSEHGEVKLADFG--VAGQLTD-----TQIKRNXFVGTP 168
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQ 390
++APE+I+ + S D W+ GI EL G P LF + P P T +
Sbjct: 169 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI---PKNNPPTLE 225
Query: 391 VSFVA--RDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
++ ++ + L KEP +++ A E+ +H F
Sbjct: 226 GNYSKPLKEFVEACLNKEP----SFRPTAKELLKHKFI 259
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG--LLDH 153
+ L+K +G G+ G L+ + N A+K +++ N +REI+ L H
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDEN------VKREIINHRSLRH 74
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P + T +VME+ SGG L + F+ED ARFF +++ + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQLISGVSYAH 132
Query: 214 MLGIVYRDLKPENVLV 229
+ + +RDLK EN L+
Sbjct: 133 AMQVAHRDLKLENTLL 148
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 325 SFVGTHEYLAPEII-RGEGHGSAVDWWTFGIFLYELLHGTTPFKG----QGNRATLFNVV 379
S VGT Y+APE++ + E G D W+ G+ LY +L G PF+ + R T+ ++
Sbjct: 175 SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 380 GQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
P+ +S R LI + V +P KRI+ EI+ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISI----PEIRNHEWF 277
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
F L+++G G G V+ T A+K++D + Q E +L D P+
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE--DIQQEITVLSQCDSPY 86
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHML 215
+ Y + D ++ME+ GG+ L + P E E+L L+YLH
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSE 143
Query: 216 GIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RD+K NVL+ + G + L+DF ++
Sbjct: 144 KKIHRDIKAANVLLSEHGEVKLADFGVA 171
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 20/158 (12%)
Query: 271 LNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTH 330
L+ E +H ++ + +L S+ +DFG V G L + T ++ +FVGT
Sbjct: 140 LHSEKKIHRDIKAAN----VLLSEHGEVKLADFG--VAGQLTD-----TQIKRNTFVGTP 188
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQ 390
++APE+I+ + S D W+ GI EL G P LF + P P T +
Sbjct: 189 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI---PKNNPPTLE 245
Query: 391 VSFVA--RDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
++ ++ + L KEP +++ A E+ +H F
Sbjct: 246 GNYSKPLKEFVEACLNKEP----SFRPTAKELLKHKFI 279
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 7/149 (4%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
F L+R+G G G V+ T A+K++D + Q E +L D +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIE--DIQQEITVLSQCDSSY 82
Query: 156 LPTLY-SYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+ Y SY + K + ++ME+ GG+ L + P F E E+L L+YLH
Sbjct: 83 VTKYYGSYLKGSKLW-IIMEYLGGGSALDLLRAGP---FDEFQIATMLKEILKGLDYLHS 138
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RD+K NVL+ ++G + L+DF ++
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFGVA 167
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 20/158 (12%)
Query: 271 LNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTH 330
L+ E +H ++ + +L S++ +DFG V G L + T ++ +FVGT
Sbjct: 136 LHSEKKIHRDIKAAN----VLLSEQGDVKLADFG--VAGQLTD-----TQIKRNTFVGTP 184
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQ 390
++APE+I+ + S D W+ GI EL G P LF + P P T
Sbjct: 185 FWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI---PKNNPPTLV 241
Query: 391 VSFVA--RDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
F ++ I L K+P +++ A E+ +H F
Sbjct: 242 GDFTKSFKEFIDACLNKDP----SFRPTAKELLKHKFI 275
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 7/149 (4%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
F L R+G G G VY T A+K++D + Q E +L D P+
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIE--DIQQEITVLSQCDSPY 78
Query: 156 LPTLY-SYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+ + SY ++ K + ++ME+ GG+ L + P E E+L L+YLH
Sbjct: 79 ITRYFGSYLKSTKLW-IIMEYLGGGSALDLLKPGP---LEETYIATILREILKGLDYLHS 134
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RD+K NVL+ ++G + L+DF ++
Sbjct: 135 ERKIHRDIKAANVLLSEQGDVKLADFGVA 163
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 20/158 (12%)
Query: 271 LNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTH 330
L+ E +H ++ + +L S++ +DFG V G L + T ++ FVGT
Sbjct: 132 LHSERKIHRDIKAAN----VLLSEQGDVKLADFG--VAGQLTD-----TQIKRNXFVGTP 180
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPET-- 388
++APE+I+ + D W+ GI EL G P LF + P P T
Sbjct: 181 FWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI---PKNSPPTLE 237
Query: 389 PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
Q S ++ + L K+P ++ A E+ +H F
Sbjct: 238 GQHSKPFKEFVEACLNKDPR----FRPTAKELLKHKFI 271
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 10/136 (7%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG--LLDH 153
+ +K +G G+ G L+ + T A+K +++ + N +REI+ L H
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDEN------VQREIINHRSLRH 75
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P + T ++ME+ SGG L+ R + F+ED ARFF ++L + Y H
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYE-RICNAGR-FSEDEARFFFQQLLSGVSYCH 133
Query: 214 MLGIVYRDLKPENVLV 229
+ I +RDLK EN L+
Sbjct: 134 SMQICHRDLKLENTLL 149
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 325 SFVGTHEYLAPEII-RGEGHGSAVDWWTFGIFLYELLHGTTPFKG----QGNRATLFNVV 379
S VGT Y+APE++ R E G D W+ G+ LY +L G PF+ + R T+ ++
Sbjct: 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL 235
Query: 380 GQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
P+ ++S LI + V +P RI+ EIK H +F
Sbjct: 236 SVKYSIPDDIRISPECCHLISRIFVADPATRISIP----EIKTHSWF 278
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 7/151 (4%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD-KASLASRNKLLRAQTEREILGLLDH 153
+F + LG G+ G V V+ R + A K++ + A RN+++R E ++L +
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIR---ELQVLHECNS 73
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL- 212
P++ Y F +D + ME GG+L + ++ K E+ + VL L YL
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLR 131
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
I++RD+KP N+LV G I L DF +S
Sbjct: 132 EKHQIMHRDVKPSNILVNSRGEIKLCDFGVS 162
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 22/155 (14%)
Query: 101 RLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTERE-------ILGLLDH 153
++G G G V + +R + A+K MD LR Q RE I+ H
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMD----------LRKQQRRELLFNEVVIMRDYQH 207
Query: 154 PFLPTLY-SYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
+ +Y SY D+ + +VMEF GG L + + E+ VL AL L
Sbjct: 208 ENVVEMYNSYLVGDELW-VVMEFLEGGALTDIVT---HTRMNEEQIAAVCLAVLQALSVL 263
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H G+++RD+K +++L+ +G + LSDF + S
Sbjct: 264 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 298
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 16/140 (11%)
Query: 290 ILPSKKNRKSKSDFGPC--VGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAV 347
IL + R SDFG C V +P R VGT ++APE+I +G V
Sbjct: 278 ILLTHDGRVKLSDFGFCAQVSKEVP---------RRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 348 DWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ-PLRFPETPQVSFVARDLIRGLLVKE 406
D W+ GI + E++ G P+ + + + P R +VS + + LLV++
Sbjct: 329 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 388
Query: 407 PHKRIAYKRGATEIKQHPFF 426
P +R A E+ +HPF
Sbjct: 389 PAQRAT----AAELLKHPFL 404
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 123/337 (36%), Gaps = 82/337 (24%)
Query: 95 NFRLLKRLGYGDIGSVY-LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++L + LG G V V++ Y AM +++ L++R+ + + E I LL H
Sbjct: 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAM-IINTKKLSARDHQ-KLEREARICRLLKH 69
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P + L+ + + L+ + +GG L F + AR + SE
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGEL-----------FEDIVAREYYSEA-------- 110
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILND 273
D H + + L C +
Sbjct: 111 -----------------DASHCIQQILEAVLHC-------------------------HQ 128
Query: 274 EYAVHGCMQPSTFFPRILPSK-KNRKSK-SDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
VH ++P +L SK K K +DFG + E F GT
Sbjct: 129 MGVVHRNLKPENL---LLASKLKGAAVKLADFGLAIE-------VEGEQQAWFGFAGTPG 178
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF--PETP 389
YL+PE++R + +G VD W G+ LY LL G PF + + F PE
Sbjct: 179 YLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWD 238
Query: 390 QVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
V+ A+DLI +L P KRI A E +HP+
Sbjct: 239 TVTPEAKDLINKMLTINPSKRIT----AAEALKHPWI 271
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFP 386
VGT ++APE+++ E +G VD W G+ L+ LL G PF G R + G+ P
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP 253
Query: 387 -ETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPEP 445
+ +S A+DL+R +L+ +P +RI E HP+ + + R A H+PE
Sbjct: 254 RQWSHISESAKDLVRRMLMLDPAERIT----VYEALNHPWLKERD----RYAYKIHLPET 305
Query: 446 VD 447
V+
Sbjct: 306 VE 307
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTERE--ILGLLDH 153
+ L + +G G V R T FA+K++D A S L +RE I +L H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAARFFASEVLLALEY 211
P + L + +D +V EF G +L +++ ++E A + ++L AL Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 212 LHMLGIVYRDLKPENVLV 229
H I++RD+KP VL+
Sbjct: 146 CHDNNIIHRDVKPHCVLL 163
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFP 386
VGT ++APE+++ E +G VD W G+ L+ LL G PF G R + G+ P
Sbjct: 196 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP 255
Query: 387 -ETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPEP 445
+ +S A+DL+R +L+ +P +RI E HP+ + + R A H+PE
Sbjct: 256 RQWSHISESAKDLVRRMLMLDPAERIT----VYEALNHPWLKERD----RYAYKIHLPET 307
Query: 446 VD 447
V+
Sbjct: 308 VE 309
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTERE--ILGLLDH 153
+ L + +G G V R T FA+K++D A S L +RE I +L H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNL--HSLRQKQPNKYFTEDAARFFASEVLLALEY 211
P + L + +D +V EF G +L +++ ++E A + ++L AL Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 212 LHMLGIVYRDLKPENVLV 229
H I++RD+KP VL+
Sbjct: 148 CHDNNIIHRDVKPHCVLL 165
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 2/152 (1%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L+NFR+ K++G G VY A+K + L E ++L L+
Sbjct: 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN 90
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQ--KQPNKYFTEDAARFFASEVLLALE 210
HP + Y+ F D +V+E G+L + + K+ + E + ++ ALE
Sbjct: 91 HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALE 150
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL 242
++H +++RD+KP NV + G + L D L
Sbjct: 151 HMHSRRVMHRDIKPANVFITATGVVKLGDLGL 182
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 325 SFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVG--QP 382
S VGT Y++PE I G+ D W+ G LYE+ +PF G++ L+++ +
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF--YGDKMNLYSLCKKIEQ 252
Query: 383 LRFPETPQVSFVA--RDLIRGLLVKEPHKR 410
+P P + R L+ + +P KR
Sbjct: 253 CDYPPLPSDHYSEELRQLVNMCINPDPEKR 282
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L NF ++G G G V + +R + A+K MD R L E I+
Sbjct: 76 LDNF---IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQ 129
Query: 153 HPFLPTLY-SYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
H + +Y SY D+ + +VMEF GG L + + E+ VL AL
Sbjct: 130 HENVVEMYNSYLVGDELW-VVMEFLEGGALTDIVT---HTRMNEEQIAAVCLAVLQALSV 185
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
LH G+++RD+K +++L+ +G + LSDF + S
Sbjct: 186 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 221
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 16/140 (11%)
Query: 290 ILPSKKNRKSKSDFGPC--VGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAV 347
IL + R SDFG C V +P R VGT ++APE+I +G V
Sbjct: 201 ILLTHDGRVKLSDFGFCAQVSKEVP---------RRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 348 DWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ-PLRFPETPQVSFVARDLIRGLLVKE 406
D W+ GI + E++ G P+ + + + P R +VS + + LLV++
Sbjct: 252 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 311
Query: 407 PHKRIAYKRGATEIKQHPFF 426
P +R A E+ +HPF
Sbjct: 312 PAQRAT----AAELLKHPFL 327
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 24/167 (14%)
Query: 88 GPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
GP + + NF+ ++++G G G VY + T A+K K L + + + + REI
Sbjct: 1 GPLVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREI 57
Query: 148 --LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA------- 198
L L+HP + L T+ LV EF LH Q K F + +A
Sbjct: 58 SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLP 107
Query: 199 --RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ + ++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 108 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 227
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 228 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 287
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 288 ----HPFFQDVT 295
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETP- 389
EY APE+ + + +A D W+ G +Y LL G PF + N+ + N++ F E
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF 227
Query: 390 -QVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF----EGVNWALVRS 436
++S A D + LLVKE R+ A+E QHP+ E V+ ++R+
Sbjct: 228 KEISIEAMDFVDRLLVKERKSRMT----ASEALQHPWLKQKIERVSTKVIRT 275
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 96 FRLLKRLGYGDIGSVY-LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+ + + LG G+ G V+ VE TY A V K + +++L + E IL + H
Sbjct: 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT----DQVL-VKKEISILNIARHR 61
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+ L+ FE+ + ++ EF SG ++ R E + +V AL++LH
Sbjct: 62 NILHLHESFESMEELVMIFEFISGLDIFE-RINTSAFELNEREIVSYVHQVCEALQFLHS 120
Query: 215 LGIVYRDLKPENVL 228
I + D++PEN++
Sbjct: 121 HNIGHFDIRPENII 134
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L+NF ++G G G V + + T A+K MD R L E I+
Sbjct: 47 LANF---IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLF---NEVVIMRDYH 100
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
H + +YS + +VMEF GG L + + E+ VL AL YL
Sbjct: 101 HDNVVDMYSSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIATVCLSVLRALSYL 157
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
H G+++RD+K +++L+ +G I LSDF + S
Sbjct: 158 HNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVS 192
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 16/141 (11%)
Query: 290 ILPSKKNRKSKSDFGPC--VGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAV 347
IL + R SDFG C V +P + VGT ++APE+I +G+ V
Sbjct: 172 ILLTSDGRIKLSDFGFCAQVSKEVP---------KRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 348 DWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ-PLRFPETPQVSFVARDLIRGLLVKE 406
D W+ GI + E++ G P+ + + + P R + +VS V R + +LV+E
Sbjct: 223 DIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVRE 282
Query: 407 PHKRIAYKRGATEIKQHPFFE 427
P +R A E+ HPF +
Sbjct: 283 PSQRAT----AQELLGHPFLK 299
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 130/335 (38%), Gaps = 83/335 (24%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
S+F + LG G G V + Y+A+K + + KL +E +L L+H
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNH 61
Query: 154 PFLPTLYS-YFETDKFY------------CLVMEFCSGGNLHSLRQKQPNKYFTEDAARF 200
++ Y+ + E F + ME+C L+ L + ++ R
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 201 FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXX 260
F ++L AL Y+H GI++RDLKP N+ + + ++ + DF L+ S ++K
Sbjct: 122 F-RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK------ 174
Query: 261 XXXXXXXXXILNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTN 320
L S+ S + +G A+
Sbjct: 175 ------------------------------LDSQNLPGSSDNLTSAIGTAM--------- 195
Query: 321 VRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVV 379
Y+A E++ G GH +D ++ GI +E+++ PF R + +
Sbjct: 196 -----------YVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKL 241
Query: 380 -GQPLRFP---ETPQVSFVARDLIRGLLVKEPHKR 410
+ FP + ++ V + +IR L+ +P+KR
Sbjct: 242 RSVSIEFPPDFDDNKMK-VEKKIIRLLIDHDPNKR 275
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L NF ++G G G V + +R + A+K MD R L E I+
Sbjct: 33 LDNF---IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQ 86
Query: 153 HPFLPTLY-SYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
H + +Y SY D+ + +VMEF GG L + + E+ VL AL
Sbjct: 87 HENVVEMYNSYLVGDELW-VVMEFLEGGALTDIVT---HTRMNEEQIAAVCLAVLQALSV 142
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
LH G+++RD+K +++L+ +G + LSDF + S
Sbjct: 143 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 178
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 16/140 (11%)
Query: 290 ILPSKKNRKSKSDFGPC--VGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAV 347
IL + R SDFG C V +P R VGT ++APE+I +G V
Sbjct: 158 ILLTHDGRVKLSDFGFCAQVSKEVP---------RRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 348 DWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ-PLRFPETPQVSFVARDLIRGLLVKE 406
D W+ GI + E++ G P+ + + + P R +VS + + LLV++
Sbjct: 209 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 268
Query: 407 PHKRIAYKRGATEIKQHPFF 426
P +R A E+ +HPF
Sbjct: 269 PAQRAT----AAELLKHPFL 284
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L NF ++G G G V + +R + A+K MD R L E I+
Sbjct: 31 LDNF---IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQ 84
Query: 153 HPFLPTLY-SYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
H + +Y SY D+ + +VMEF GG L + + E+ VL AL
Sbjct: 85 HENVVEMYNSYLVGDELW-VVMEFLEGGALTDIVT---HTRMNEEQIAAVCLAVLQALSV 140
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
LH G+++RD+K +++L+ +G + LSDF + S
Sbjct: 141 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 176
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 16/140 (11%)
Query: 290 ILPSKKNRKSKSDFGPC--VGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAV 347
IL + R SDFG C V +P R VGT ++APE+I +G V
Sbjct: 156 ILLTHDGRVKLSDFGFCAQVSKEVP---------RRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 348 DWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ-PLRFPETPQVSFVARDLIRGLLVKE 406
D W+ GI + E++ G P+ + + + P R +VS + + LLV++
Sbjct: 207 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 266
Query: 407 PHKRIAYKRGATEIKQHPFF 426
P +R A E+ +HPF
Sbjct: 267 PAQRAT----AAELLKHPFL 282
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 6/157 (3%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
++++ +LG G + +VYL E N A+K + L R + E L H
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+ ++ E D Y LVME+ G L + P + D A F +++L +++ H
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP---LSVDTAINFTNQILDGIKHAHD 129
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPT 251
+ IV+RD+KP+N+L+ + + L FD + ++S T
Sbjct: 130 MRIVHRDIKPQNILI--DSNKTLKIFDFGIAKALSET 164
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 302 DFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLH 361
DFG + AL E TN +GT +Y +PE +GE D ++ GI LYE+L
Sbjct: 154 DFG--IAKALSETSLTQTN----HVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLV 207
Query: 362 GTTPFKGQ 369
G PF G+
Sbjct: 208 GEPPFNGE 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L NF ++G G G V + +R + A+K MD R L E I+
Sbjct: 26 LDNF---IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQ 79
Query: 153 HPFLPTLY-SYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
H + +Y SY D+ + +VMEF GG L + + E+ VL AL
Sbjct: 80 HENVVEMYNSYLVGDELW-VVMEFLEGGALTDIVT---HTRMNEEQIAAVCLAVLQALSV 135
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
LH G+++RD+K +++L+ +G + LSDF + S
Sbjct: 136 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 171
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 16/140 (11%)
Query: 290 ILPSKKNRKSKSDFGPC--VGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAV 347
IL + R SDFG C V +P R VGT ++APE+I +G V
Sbjct: 151 ILLTHDGRVKLSDFGFCAQVSKEVP---------RRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 348 DWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ-PLRFPETPQVSFVARDLIRGLLVKE 406
D W+ GI + E++ G P+ + + + P R +VS + + LLV++
Sbjct: 202 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 261
Query: 407 PHKRIAYKRGATEIKQHPFF 426
P +R A E+ +HPF
Sbjct: 262 PAQRAT----AAELLKHPFL 277
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L NF ++G G G V + +R + A+K MD R L E I+
Sbjct: 22 LDNF---IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF---NEVVIMRDYQ 75
Query: 153 HPFLPTLY-SYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
H + +Y SY D+ + +VMEF GG L + + E+ VL AL
Sbjct: 76 HENVVEMYNSYLVGDELW-VVMEFLEGGALTDIVT---HTRMNEEQIAAVCLAVLQALSV 131
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
LH G+++RD+K +++L+ +G + LSDF + S
Sbjct: 132 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 167
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 16/140 (11%)
Query: 290 ILPSKKNRKSKSDFGPC--VGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAV 347
IL + R SDFG C V +P R VGT ++APE+I +G V
Sbjct: 147 ILLTHDGRVKLSDFGFCAQVSKEVP---------RRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 348 DWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ-PLRFPETPQVSFVARDLIRGLLVKE 406
D W+ GI + E++ G P+ + + + P R +VS + + LLV++
Sbjct: 198 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 257
Query: 407 PHKRIAYKRGATEIKQHPFF 426
P +R A E+ +HPF
Sbjct: 258 PAQRAT----AAELLKHPFL 273
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD-KASLASRNKLLRAQTEREILGLLDH 153
+F + LG G+ G V+ V + + A K++ + A RN+++R E ++L +
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNS 125
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL- 212
P++ Y F +D + ME GG+L + +K E + V+ L YL
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLR 183
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
I++RD+KP N+LV G I L DF +S
Sbjct: 184 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 214
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 277 VHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPE 336
+H ++PS IL + + DFG V G L + MA SFVGT Y++PE
Sbjct: 189 MHRDVKPSN----ILVNSRGEIKLCDFG--VSGQLIDSMAN-------SFVGTRSYMSPE 235
Query: 337 IIRGEGHGSAVDWWTFGIFLYELLHGTTPF 366
++G + D W+ G+ L E+ G P
Sbjct: 236 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD-KASLASRNKLLRAQTEREILGLLDH 153
+F + LG G+ G V+ V + + A K++ + A RN+++R E ++L +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNS 63
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL- 212
P++ Y F +D + ME GG+L + +K E + V+ L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLR 121
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
I++RD+KP N+LV G I L DF +S
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 277 VHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPE 336
+H ++PS IL + + DFG V G L + MA SFVGT Y++PE
Sbjct: 127 MHRDVKPSN----ILVNSRGEIKLCDFG--VSGQLIDSMAN-------SFVGTRSYMSPE 173
Query: 337 IIRGEGHGSAVDWWTFGIFLYELLHGTTPF 366
++G + D W+ G+ L E+ G P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Query: 90 PIG-LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI- 147
P+G + NF+ ++++G G G VY + T A+K K L + + + + REI
Sbjct: 1 PLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREIS 57
Query: 148 -LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVL 206
L L+HP + L T+ LV EF S +L + + ++L
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
L + H +++RDLKPEN+L+ EG I L+DF L+
Sbjct: 117 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 153
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 287 ----HPFFQDVT 294
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL-- 150
+ + L+++G G G+V+ + R T+ A+K + L ++ + + REI L
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALK---RVRLDDDDEGVPSSALREICLLKE 57
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-------DAARFFAS 203
L H + L+ +DK LV EFC + KYF + + F
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFCD---------QDLKKYFDSCNGDLDPEIVKSFLF 108
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++L L + H +++RDLKP+N+L+ G + L+DF L+
Sbjct: 109 QLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLA 148
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 137/359 (38%), Gaps = 98/359 (27%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASR-NKLLRAQTEREILG 149
I + + +++G G G+V+ E G++ + +M++ A R N+ LR E I+
Sbjct: 34 IPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKI-LMEQDFHAERVNEFLR---EVAIMK 89
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF-FASEVLLA 208
L HP + +V E+ S G+L+ L K + ++ R A +V
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 149
Query: 209 LEYLHMLG--IVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXX 266
+ YLH IV+R+LK N+LV + + + DF LS
Sbjct: 150 MNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR---------------------- 187
Query: 267 XXXILNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSF 326
++ STF SKS G PE MA
Sbjct: 188 --------------LKASTFL----------SSKSAAG------TPEWMA---------- 207
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVG---QPL 383
PE++R E D ++FG+ L+EL P+ G N A + VG + L
Sbjct: 208 --------PEVLRDEPSNEKSDVYSFGVILWELATLQQPW-GNLNPAQVVAAVGFKCKRL 258
Query: 384 RFPE--TPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPP 440
P PQV+ + I G EP KR ++ ++ L++SA+PP
Sbjct: 259 EIPRNLNPQVAAI----IEGCWTNEPWKRPSFATIMDLLR----------PLIKSAVPP 303
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 26/177 (14%)
Query: 80 AINMISLRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLL 139
A+ M+ +G P L + + ++G G G V L + + A+K+MD L
Sbjct: 33 ALRMVVDQGDPRLLLDSYV--KIGEGSTGIVCLAREKHSGRQVAVKMMD----------L 80
Query: 140 RAQTEREILGLLDHPFLPTLYSYFETDKFY---------CLVMEFCSGGNLHSLRQKQPN 190
R Q RE+L + + Y +F + Y ++MEF GG L + +
Sbjct: 81 RKQQRRELL--FNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ--- 135
Query: 191 KYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
E+ VL AL YLH G+++RD+K +++L+ +G + LSDF + S
Sbjct: 136 VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQIS 192
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 290 ILPSKKNRKSKSDFGPC--VGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAV 347
IL + R SDFG C + +P + VGT ++APE+I + + V
Sbjct: 172 ILLTLDGRVKLSDFGFCAQISKDVP---------KRKXLVGTPYWMAPEVISRSLYATEV 222
Query: 348 DWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ-PLRFPETPQVSFVARDLIRGLLVKE 406
D W+ GI + E++ G P+ + + P + + +VS V RD + +LV++
Sbjct: 223 DIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRD 282
Query: 407 PHKRIAYKRGATEIKQHPFF 426
P +R A E+ HPF
Sbjct: 283 PQERAT----AQELLDHPFL 298
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 88 GPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
GP + NF+ ++++G G G VY + T A+K K L + + + + REI
Sbjct: 1 GPLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREI 57
Query: 148 --LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA------- 198
L L+HP + L T+ LV EF LH Q K F + +A
Sbjct: 58 SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLP 107
Query: 199 --RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ + ++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 108 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 227
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 228 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 287
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 288 ----HPFFQDVT 295
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 90 PIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI-- 147
P + NF+ ++++G G G VY + T A+K K L + + + + REI
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 57
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA--------- 198
L L+HP + L T+ LV EF LH Q K F + +A
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLI 107
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ + ++L L + H +++RDLKPEN+L+ EG I L+DF L+
Sbjct: 108 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 152
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 286 ----HPFFQDVT 293
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 88 GPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
G P + NF+ ++++G G G VY + T A+K K L + + + + REI
Sbjct: 4 GSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREI 60
Query: 148 --LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA------- 198
L L+HP + L T+ LV EF LH Q K F + +A
Sbjct: 61 SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLP 110
Query: 199 --RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ + ++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 111 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 171 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 230
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 231 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 290
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 291 ----HPFFQDVT 298
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 24/163 (14%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LG 149
G+ NF+ ++++G G G VY + T A+K K L + + + + REI L
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLK 57
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA---------RF 200
L+HP + L T+ LV EF LH Q K F + +A +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKS 107
Query: 201 FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 88 GPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
G P + NF+ ++++G G G VY + T A+K K L + + + + REI
Sbjct: 4 GSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREI 60
Query: 148 --LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA------- 198
L L+HP + L T+ LV EF LH Q K F + +A
Sbjct: 61 SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLP 110
Query: 199 --RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ + ++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 111 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 171 VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 230
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 231 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 290
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 291 ----HPFFQDVT 298
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 7/150 (4%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGL 150
+ + + ++G G G V+ R T A+K K + + +++ REI L
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIK---KFLESEDDPVIKKIALREIRMLKQ 58
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
L HP L L F + LV E+C LH L + Q + E + + L A+
Sbjct: 59 LKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVN 116
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDF 240
+ H ++RD+KPEN+L+ I L DF
Sbjct: 117 FCHKHNCIHRDVKPENILITKHSVIKLCDF 146
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 73/182 (40%), Gaps = 41/182 (22%)
Query: 278 HGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEI 337
H C+ IL +K + DFG L+ P++ V T Y +PE+
Sbjct: 121 HNCIHRDVKPENILITKHSVIKLCDFG------FARLLTGPSDYYDDE-VATRWYRSPEL 173
Query: 338 IRGEG-HGSAVDWWTFGIFLYELLHGTTPFKGQGN-------RATLFNVV---------- 379
+ G+ +G VD W G ELL G + G+ + R TL +++
Sbjct: 174 LVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTN 233
Query: 380 ----GQPLRFPET--------PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
G + PE P +S+ A L++G L +P +R+ ++ HP+FE
Sbjct: 234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLT----CEQLLHHPYFE 289
Query: 428 GV 429
+
Sbjct: 290 NI 291
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD-KASLASRNKLLRAQTEREILGLLDH 153
+F + LG G+ G V+ V + + A K++ + A RN+++R E ++L +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNS 63
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL- 212
P++ Y F +D + ME GG+L + +K E + V+ L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLR 121
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
I++RD+KP N+LV G I L DF +S
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 277 VHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPE 336
+H ++PS IL + + DFG V G L + MA SFVGT Y++PE
Sbjct: 127 MHRDVKPSN----ILVNSRGEIKLCDFG--VSGQLIDSMAN-------SFVGTRSYMSPE 173
Query: 337 IIRGEGHGSAVDWWTFGIFLYELLHGTTPF 366
++G + D W+ G+ L E+ G P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD-KASLASRNKLLRAQTEREILGLLDH 153
+F + LG G+ G V+ V + + A K++ + A RN+++R E ++L +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNS 63
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL- 212
P++ Y F +D + ME GG+L + +K E + V+ L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLR 121
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
I++RD+KP N+LV G I L DF +S
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 277 VHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPE 336
+H ++PS IL + + DFG V G L + MA SFVGT Y++PE
Sbjct: 127 MHRDVKPSN----ILVNSRGEIKLCDFG--VSGQLIDSMAN-------SFVGTRSYMSPE 173
Query: 337 IIRGEGHGSAVDWWTFGIFLYELLHGTTPF 366
++G + D W+ G+ L E+ G P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLL--RAQTEREILGLLDHPFLPTL 159
LG G G V + + T FA+K++ A R L RA I+ ++D L
Sbjct: 40 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 97
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
Y+ K +VME GG L S Q + ++ FTE A + A++YLH + I +
Sbjct: 98 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 154
Query: 220 RDLKPENVLV---RDEGHIMLSDFDLS 243
RD+KPEN+L R + L+DF +
Sbjct: 155 RDVKPENLLYTSKRPNAILKLTDFGFA 181
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRA------TLFNVVGQPLRF 385
Y+APE++ E + + D W+ G+ +Y LL G PF A T +
Sbjct: 199 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 258
Query: 386 PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
PE +VS + LIR LL EP +R+ TE HP+
Sbjct: 259 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 295
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD-KASLASRNKLLRAQTEREILGLLDH 153
+F + LG G+ G V+ V + + A K++ + A RN+++R E ++L +
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNS 66
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL- 212
P++ Y F +D + ME GG+L + +K E + V+ L YL
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLR 124
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
I++RD+KP N+LV G I L DF +S
Sbjct: 125 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 155
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 8/128 (6%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
+ PS S+ + C G +L+ E N FVGT Y++PE ++G + D
Sbjct: 134 VKPSNILVNSRGEIKLCDFGVSGQLIDEMAN----EFVGTRSYMSPERLQGTHYSVQSDI 189
Query: 350 WTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVA--RDLIRGLLVKEP 407
W+ G+ L E+ G P L +V +P P+ P F +D + L+K P
Sbjct: 190 WSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPP--PKLPSAVFSLEFQDFVNKCLIKNP 247
Query: 408 HKRIAYKR 415
+R K+
Sbjct: 248 AERADLKQ 255
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLL--RAQTEREILGLLDHPFLPTL 159
LG G G V + + T FA+K++ A R L RA I+ ++D L
Sbjct: 32 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 89
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
Y+ K +VME GG L S Q + ++ FTE A + A++YLH + I +
Sbjct: 90 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 146
Query: 220 RDLKPENVLV---RDEGHIMLSDFDLS 243
RD+KPEN+L R + L+DF +
Sbjct: 147 RDVKPENLLYTSKRPNAILKLTDFGFA 173
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRA------TLFNVVGQPLRF 385
Y+APE++ E + + D W+ G+ +Y LL G PF A T +
Sbjct: 191 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 250
Query: 386 PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
PE +VS + LIR LL EP +R+ TE HP+
Sbjct: 251 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 287
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD-KASLASRNKLLRAQTEREILGLLDH 153
+F + LG G+ G V+ V + + A K++ + A RN+++R E ++L +
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNS 90
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL- 212
P++ Y F +D + ME GG+L + +K E + V+ L YL
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLR 148
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
I++RD+KP N+LV G I L DF +S
Sbjct: 149 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 179
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 277 VHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPE 336
+H ++PS IL + + DFG V G L + MA SFVGT Y++PE
Sbjct: 154 MHRDVKPSN----ILVNSRGEIKLCDFG--VSGQLIDSMAN-------SFVGTRSYMSPE 200
Query: 337 IIRGEGHGSAVDWWTFGIFLYELLHGTTPF 366
++G + D W+ G+ L E+ G P
Sbjct: 201 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLL--RAQTEREILGLLDHPFLPTL 159
LG G G V + + T FA+K++ A R L RA I+ ++D L
Sbjct: 30 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 87
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
Y+ K +VME GG L S Q + ++ FTE A + A++YLH + I +
Sbjct: 88 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 144
Query: 220 RDLKPENVLV---RDEGHIMLSDF 240
RD+KPEN+L R + L+DF
Sbjct: 145 RDVKPENLLYTSKRPNAILKLTDF 168
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRA------TLFNVVGQPLRF 385
Y+APE++ E + + D W+ G+ +Y LL G PF A T +
Sbjct: 189 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 248
Query: 386 PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
PE +VS + LIR LL EP +R+ TE HP+
Sbjct: 249 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 285
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLL--RAQTEREILGLLDHPFLPTL 159
LG G G V + + T FA+K++ A R L RA I+ ++D L
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 83
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
Y+ K +VME GG L S Q + ++ FTE A + A++YLH + I +
Sbjct: 84 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 220 RDLKPENVLV---RDEGHIMLSDF 240
RD+KPEN+L R + L+DF
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDF 164
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRA------TLFNVVGQPLRF 385
Y+APE++ E + + D W+ G+ +Y LL G PF A T +
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 244
Query: 386 PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
PE +VS + LIR LL EP +R+ TE HP+
Sbjct: 245 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 281
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLL--RAQTEREILGLLDHPFLPTL 159
LG G G V + + T FA+K++ A R L RA I+ ++D L
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 81
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
Y+ K +VME GG L S Q + ++ FTE A + A++YLH + I +
Sbjct: 82 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 138
Query: 220 RDLKPENVLV---RDEGHIMLSDF 240
RD+KPEN+L R + L+DF
Sbjct: 139 RDVKPENLLYTSKRPNAILKLTDF 162
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRA------TLFNVVGQPLRF 385
Y+APE++ E + + D W+ G+ +Y LL G PF A T +
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 242
Query: 386 PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
PE +VS + LIR LL EP +R+ TE HP+
Sbjct: 243 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 279
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLL--RAQTEREILGLLDHPFLPTL 159
LG G G V + + T FA+K++ A R L RA I+ ++D L
Sbjct: 31 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 88
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
Y+ K +VME GG L S Q + ++ FTE A + A++YLH + I +
Sbjct: 89 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 145
Query: 220 RDLKPENVLV---RDEGHIMLSDF 240
RD+KPEN+L R + L+DF
Sbjct: 146 RDVKPENLLYTSKRPNAILKLTDF 169
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRA------TLFNVVGQPLRF 385
Y+APE++ E + + D W+ G+ +Y LL G PF A T +
Sbjct: 190 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 249
Query: 386 PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
PE +VS + LIR LL EP +R+ TE HP+
Sbjct: 250 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 286
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLL--RAQTEREILGLLDHPFLPTL 159
LG G G V + + T FA+K++ A R L RA I+ ++D L
Sbjct: 76 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 133
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
Y+ K +VME GG L S Q + ++ FTE A + A++YLH + I +
Sbjct: 134 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 190
Query: 220 RDLKPENVLV---RDEGHIMLSDF 240
RD+KPEN+L R + L+DF
Sbjct: 191 RDVKPENLLYTSKRPNAILKLTDF 214
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRA------TLFNVVGQPLRF 385
Y+APE++ E + + D W+ G+ +Y LL G PF A T +
Sbjct: 235 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 294
Query: 386 PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
PE +VS + LIR LL EP +R+ TE HP+
Sbjct: 295 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 331
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLL--RAQTEREILGLLDHPFLPTL 159
LG G G V + + T FA+K++ A R L RA I+ ++D L
Sbjct: 25 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 82
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
Y+ K +VME GG L S Q + ++ FTE A + A++YLH + I +
Sbjct: 83 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 139
Query: 220 RDLKPENVLV---RDEGHIMLSDF 240
RD+KPEN+L R + L+DF
Sbjct: 140 RDVKPENLLYTSKRPNAILKLTDF 163
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRA------TLFNVVGQPLRF 385
Y+APE++ E + + D W+ G+ +Y LL G PF A T +
Sbjct: 184 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 243
Query: 386 PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
PE +VS + LIR LL EP +R+ TE HP+
Sbjct: 244 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 280
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLL--RAQTEREILGLLDHPFLPTL 159
LG G G V + + T FA+K++ A R L RA I+ ++D L
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 127
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
Y+ K +VME GG L S Q + ++ FTE A + A++YLH + I +
Sbjct: 128 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 184
Query: 220 RDLKPENVLV---RDEGHIMLSDF 240
RD+KPEN+L R + L+DF
Sbjct: 185 RDVKPENLLYTSKRPNAILKLTDF 208
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRA------TLFNVVGQPLRF 385
Y+APE++ E + + D W+ G+ +Y LL G PF A T +
Sbjct: 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 288
Query: 386 PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
PE +VS + LIR LL EP +R+ TE HP+
Sbjct: 289 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 325
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLL--RAQTEREILGLLDHPFLPTL 159
LG G G V + + T FA+K++ A R L RA I+ ++D L
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 81
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
Y+ K +VME GG L S Q + ++ FTE A + A++YLH + I +
Sbjct: 82 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 138
Query: 220 RDLKPENVLV---RDEGHIMLSDF 240
RD+KPEN+L R + L+DF
Sbjct: 139 RDVKPENLLYTSKRPNAILKLTDF 162
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRA------TLFNVVGQPLRF 385
Y+APE++ E + + D W+ G+ +Y LL G PF A T +
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 242
Query: 386 PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
PE +VS + LIR LL EP +R+ TE HP+
Sbjct: 243 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 279
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLL--RAQTEREILGLLDHPFLPTL 159
LG G G V + + T FA+K++ A R L RA I+ ++D L
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 83
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
Y+ K +VME GG L S Q + ++ FTE A + A++YLH + I +
Sbjct: 84 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 220 RDLKPENVLV---RDEGHIMLSDF 240
RD+KPEN+L R + L+DF
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDF 164
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Query: 340 GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRA------TLFNVVGQPLRFPETPQVSF 393
GE + + D W+ G+ +Y LL G PF A T + PE +VS
Sbjct: 172 GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE 231
Query: 394 VARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
+ LIR LL EP +R+ TE HP+
Sbjct: 232 EVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 260
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 6/154 (3%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LG 149
+ NF+ ++++G G G VY + T A+K K L + + + + REI L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLK 58
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLAL 209
L+HP + L T+ LV EF S +L + + ++L L
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ H +++RDLKPEN+L+ EG I L+DF L+
Sbjct: 118 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 151
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 285 ----HPFFQDVT 292
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLL--RAQTEREILGLLDHPFLPTL 159
LG G G V + + T FA+K++ A R L RA I+ ++D L
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 83
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
Y+ K +VME GG L S Q + ++ FTE A + A++YLH + I +
Sbjct: 84 YA---GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 220 RDLKPENVLV---RDEGHIMLSDF 240
RD+KPEN+L R + L+DF
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDF 164
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRA------TLFNVVGQPLRF 385
Y+APE++ E + + D W+ G+ +Y LL G PF A T +
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 244
Query: 386 PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
PE +VS + LIR LL EP +R+ TE HP+
Sbjct: 245 PEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWI 281
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Query: 90 PIG-LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI- 147
P+G + NF+ ++++G G G VY + T A+K K L + + + + REI
Sbjct: 1 PLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREIS 57
Query: 148 -LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVL 206
L L+HP + L T+ LV EF S +L + + ++L
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLL 116
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 287 ----HPFFQDVT 294
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD-KASLASRNKLLRAQTEREILGLLDH 153
+F + LG G+ G V+ V + + A K++ + A RN+++R E ++L +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNS 63
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL- 212
P++ Y F +D + ME GG+L + +K E + V+ L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLR 121
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
I++RD+KP N+LV G I L DF +S
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 277 VHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPE 336
+H ++PS IL + + DFG V G L + MA SFVGT Y++PE
Sbjct: 127 MHRDVKPSN----ILVNSRGEIKLCDFG--VSGQLIDSMAN-------SFVGTRSYMSPE 173
Query: 337 IIRGEGHGSAVDWWTFGIFLYELLHGTTPF 366
++G + D W+ G+ L E+ G P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD-KASLASRNKLLRAQTEREILGLLDH 153
+F + LG G+ G V+ V + + A K++ + A RN+++R E ++L +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNS 63
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL- 212
P++ Y F +D + ME GG+L + +K E + V+ L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLR 121
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
I++RD+KP N+LV G I L DF +S
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 277 VHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPE 336
+H ++PS IL + + DFG V G L + MA SFVGT Y++PE
Sbjct: 127 MHRDVKPSN----ILVNSRGEIKLCDFG--VSGQLIDSMAN-------SFVGTRSYMSPE 173
Query: 337 IIRGEGHGSAVDWWTFGIFLYELLHGTTPF 366
++G + D W+ G+ L E+ G P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 90 PIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI-- 147
P + NF+ ++++G G G VY + T A+K K L + + + + REI
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 58
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA--------- 198
L L+HP + L T+ LV EF LH Q K F + +A
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKTFMDASALTGIPLPLI 108
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ + ++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 287 ----HPFFQDVT 294
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 24/163 (14%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LG 149
+ NF+ ++++G G G VY + T A+K K L + + + + REI L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLK 58
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA---------RF 200
L+HP + L T+ LV EF LH Q K F + +A +
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKS 108
Query: 201 FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L L + H +++RDLKPEN+L+ EG I L+DF L+
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 151
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 285 ----HPFFQDVT 292
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 90 PIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI-- 147
P + NF+ ++++G G G VY + T A+K K L + + + + REI
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 57
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA--------- 198
L L+HP + L T+ LV EF LH Q K F + +A
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLI 107
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ + ++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 108 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 286 ----HPFFQDVT 293
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 90 PIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI-- 147
P + NF+ ++++G G G VY + T A+K K L + + + + REI
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 57
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA--------- 198
L L+HP + L T+ LV EF LH Q K F + +A
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLI 107
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ + ++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 108 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 286 ----HPFFQDVT 293
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 90 PIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI-- 147
P + NF+ ++++G G G VY + T A+K K L + + + + REI
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 58
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA--------- 198
L L+HP + L T+ LV EF LH Q K F + +A
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLI 108
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ + ++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 287 ----HPFFQDVT 294
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 25/166 (15%)
Query: 90 PIG-LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI- 147
P+G + NF+ ++++G G G VY + T A+K K L + + + + REI
Sbjct: 1 PLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREIS 57
Query: 148 -LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA-------- 198
L L+HP + L T+ LV EF LH Q K F + +A
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPL 107
Query: 199 -RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ + ++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 108 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 287 ----HPFFQDVT 294
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL-- 150
+ + L+++G G G+V+ + R T+ A+K + L ++ + + REI L
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALK---RVRLDDDDEGVPSSALREICLLKE 57
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE-------DAARFFAS 203
L H + L+ +DK LV EFC + KYF + + F
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFCD---------QDLKKYFDSCNGDLDPEIVKSFLF 108
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++L L + H +++RDLKP+N+L+ G + L++F L+
Sbjct: 109 QLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLA 148
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD-KASLASRNKLLRAQTEREILGLLDH 153
+F + LG G+ G V+ V + + A K++ + A RN+++R E ++L +
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNS 82
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL- 212
P++ Y F +D + ME GG+L + +K E + V+ L YL
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLR 140
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
I++RD+KP N+LV G I L DF +S
Sbjct: 141 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 171
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 21/145 (14%)
Query: 277 VHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPE 336
+H ++PS IL + + DFG V G L + MA SFVGT Y++PE
Sbjct: 146 MHRDVKPSN----ILVNSRGEIKLCDFG--VSGQLIDSMAN-------SFVGTRSYMSPE 192
Query: 337 IIRGEGHGSAVDWWTFGIFLYELLHGTTPF-KGQGNRAT---LFNVVGQPLRFPETPQ-- 390
++G + D W+ G+ L E+ G P G G+ A L +V +P P+ P
Sbjct: 193 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPP--PKLPSGV 250
Query: 391 VSFVARDLIRGLLVKEPHKRIAYKR 415
S +D + L+K P +R K+
Sbjct: 251 FSLEFQDFVNKCLIKNPAERADLKQ 275
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+ RL +LG G G V++ GT T A+K + +++ L AQ ++ L H
Sbjct: 268 SLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHE 322
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
L LY+ + Y +V E+ S G+L + + KY A+++ + Y+
Sbjct: 323 KLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 381
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ V+RDL+ N+LV + ++DF L+
Sbjct: 382 MNYVHRDLRAANILVGENLVCKVADFGLA 410
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 348 DWWTFGIFLYEL-LHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKE 406
D W+FGI L EL G P+ G NR L + V + R P P+ DL+ KE
Sbjct: 446 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 504
Query: 407 PHKRIAYK 414
P +R ++
Sbjct: 505 PEERPTFE 512
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 24/163 (14%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LG 149
+ NF+ ++++G G G VY + T A+K K L + + + + REI L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLK 57
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA---------RF 200
L+HP + L T+ LV EF LH Q K F + +A +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKDFMDASALTGIPLPLIKS 107
Query: 201 FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L L + H +++RDLKPEN+L+ EG I L+DF L+
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 150
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+ RL +LG G G V++ GT T A+K + +++ L AQ ++ L H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRH 72
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y +VME+ S G L + + KY A+++ + Y+
Sbjct: 73 EKLVQLYAVVSEEPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ V+RDL+ N+LV + ++DF L+
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 348 DWWTFGIFLYEL-LHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKE 406
D W+FGI L EL G P+ G NR L + V + R P P+ DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 407 PHKR 410
P +R
Sbjct: 256 PEER 259
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 6/154 (3%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LG 149
+ NF+ ++++G G G VY + T A+K K L + + + + REI L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLK 59
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLAL 209
L+HP + L T+ LV EF S +L + + ++L L
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 286 ----HPFFQDVT 293
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 24/163 (14%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LG 149
+ NF+ ++++G G G VY + T A+K K L + + + + REI L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLK 57
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA---------RF 200
L+HP + L T+ LV EF LH Q K F + +A +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKS 107
Query: 201 FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 24/162 (14%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGL 150
+ NF+ ++++G G G VY + T A+K K L + + + + REI L
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 59
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA---------RFF 201
L+HP + L T+ LV EF LH Q K F + +A + +
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 109
Query: 202 ASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 285 ----HPFFQDVT 292
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 24/163 (14%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LG 149
+ NF+ ++++G G G VY + T A+K K L + + + + REI L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLK 57
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA---------RF 200
L+HP + L T+ LV EF LH Q K F + +A +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKS 107
Query: 201 FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 24/163 (14%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LG 149
+ NF+ ++++G G G VY + T A+K K L + + + + REI L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLK 58
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA---------RF 200
L+HP + L T+ LV EF LH Q K F + +A +
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKS 108
Query: 201 FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 285 ----HPFFQDVT 292
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 24/162 (14%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGL 150
+ NF+ ++++G G G VY + T A+K K L + + + + REI L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA---------RFF 201
L+HP + L T+ LV EF LH Q K F + +A + +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 108
Query: 202 ASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 109 LFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 24/163 (14%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LG 149
+ NF+ ++++G G G VY + T A+K K L + + + + REI L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLK 58
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA---------RF 200
L+HP + L T+ LV EF LH Q K F + +A +
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKS 108
Query: 201 FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 285 ----HPFFQDVT 292
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 24/162 (14%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGL 150
+ NF+ ++++G G G VY + T A+K K L + + + + REI L
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 57
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA---------RFF 201
L+HP + L T+ LV EF LH Q K F + +A + +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 107
Query: 202 ASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 283 ----HPFFQDVT 290
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 30/164 (18%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGL 150
+ + L+++G G G VY + N Y + K L ++ + + T REI L
Sbjct: 1 MEKYHGLEKIGEGTYGVVY----KAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKE 56
Query: 151 LDHPFLPTLYSYFETDKFYCLVME-----------FCSGGNLHSLRQKQPNKYFTEDAAR 199
L H + LY T K LV E C GG L S+ A+
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-LESV------------TAK 103
Query: 200 FFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
F ++L + Y H +++RDLKP+N+L+ EG + ++DF L+
Sbjct: 104 SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 76/188 (40%), Gaps = 45/188 (23%)
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSF-VGTH 330
+D +H ++P +L +++ +DFG +P VR + V T
Sbjct: 117 HDRRVLHRDLKPQN----LLINREGELKIADFGLARAFGIP--------VRKYTHEVVTL 164
Query: 331 EYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVGQP---- 382
Y AP+++ G + + + +D W+ G E+++GT F G L F ++G P
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKN 224
Query: 383 --------------LRFPETPQVSFV------ARDLIRGLLVKEPHKRIAYKRGATEIKQ 422
+ P SF+ DL+ +L +P++RI K+ +
Sbjct: 225 WPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL----E 280
Query: 423 HPFFEGVN 430
H +F+ N
Sbjct: 281 HAYFKENN 288
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 30/164 (18%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGL 150
+ + L+++G G G VY + N Y + K L ++ + + T REI L
Sbjct: 1 MEKYHGLEKIGEGTYGVVY----KAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKE 56
Query: 151 LDHPFLPTLYSYFETDKFYCLVME-----------FCSGGNLHSLRQKQPNKYFTEDAAR 199
L H + LY T K LV E C GG L S+ A+
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-LESV------------TAK 103
Query: 200 FFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
F ++L + Y H +++RDLKP+N+L+ EG + ++DF L+
Sbjct: 104 SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 75/188 (39%), Gaps = 45/188 (23%)
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSF-VGTH 330
+D +H ++P +L +++ +DFG +P VR + V T
Sbjct: 117 HDRRVLHRDLKPQN----LLINREGELKIADFGLARAFGIP--------VRKYTHEVVTL 164
Query: 331 EYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVGQP---- 382
Y AP+++ G + + + +D W+ G E+++G F G L F ++G P
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKN 224
Query: 383 --------------LRFPETPQVSFV------ARDLIRGLLVKEPHKRIAYKRGATEIKQ 422
+ P SF+ DL+ +L +P++RI K+ +
Sbjct: 225 WPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL----E 280
Query: 423 HPFFEGVN 430
H +F+ N
Sbjct: 281 HAYFKENN 288
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 30/164 (18%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGL 150
+ + L+++G G G VY + N Y + K L ++ + + T REI L
Sbjct: 1 MEKYHGLEKIGEGTYGVVY----KAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKE 56
Query: 151 LDHPFLPTLYSYFETDKFYCLVME-----------FCSGGNLHSLRQKQPNKYFTEDAAR 199
L H + LY T K LV E C GG L S+ A+
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-LESV------------TAK 103
Query: 200 FFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
F ++L + Y H +++RDLKP+N+L+ EG + ++DF L+
Sbjct: 104 SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 76/188 (40%), Gaps = 45/188 (23%)
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSF-VGTH 330
+D +H ++P +L +++ +DFG +P VR + + T
Sbjct: 117 HDRRVLHRDLKPQN----LLINREGELKIADFGLARAFGIP--------VRKYTHEIVTL 164
Query: 331 EYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVGQP---- 382
Y AP+++ G + + + +D W+ G E+++GT F G L F ++G P
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKN 224
Query: 383 --------------LRFPETPQVSFV------ARDLIRGLLVKEPHKRIAYKRGATEIKQ 422
+ P SF+ DL+ +L +P++RI K+ +
Sbjct: 225 WPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL----E 280
Query: 423 HPFFEGVN 430
H +F+ N
Sbjct: 281 HAYFKENN 288
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 24/163 (14%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LG 149
+ NF+ ++++G G G VY + T A+K K L + + + + REI L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLK 57
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA---------RF 200
L+HP + L T+ LV EF LH Q K F + +A +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKS 107
Query: 201 FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 24/163 (14%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LG 149
+ NF+ ++++G G G VY + T A+K K L + + + + REI L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLK 57
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA---------RF 200
L+HP + L T+ LV EF LH Q K F + +A +
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKS 107
Query: 201 FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 52/129 (40%), Gaps = 32/129 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 419 EIKQHPFFE 427
HPFF+
Sbjct: 284 ----HPFFQ 288
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+ RL +LG G G V++ GT T A+K + +++ L AQ ++ L H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRH 72
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y +V+E+ S G+L + + KY A+++ + Y+
Sbjct: 73 EKLVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ V+RDL+ N+LV + ++DF L+
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 348 DWWTFGIFLYEL-LHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKE 406
D W+FGI L EL G P+ G NR L + V + R P P+ DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 407 PHKR 410
P +R
Sbjct: 256 PEER 259
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 24/162 (14%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGL 150
+ NF+ ++++G G G VY + T A+K K L + + + + REI L
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 57
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA---------RFF 201
L+HP + L T+ LV EF LH Q K F + +A + +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 107
Query: 202 ASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 283 ----HPFFQDVT 290
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 24/162 (14%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGL 150
+ NF+ ++++G G G VY + T A+K K L + + + + REI L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA---------RFF 201
L+HP + L T+ LV EF LH Q K F + +A + +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 108
Query: 202 ASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 164 VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 24/162 (14%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGL 150
+ NF+ ++++G G G VY + T A+K K L + + + + REI L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 58
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA---------RFF 201
L+HP + L T+ LV EF LH Q K F + +A + +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 108
Query: 202 ASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 24/162 (14%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGL 150
+ NF+ ++++G G G VY + T A+K K L + + + + REI L
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 57
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA---------RFF 201
L+HP + L T+ LV EF LH Q K F + +A + +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 107
Query: 202 ASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 283 ----HPFFQDVT 290
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+ RL +LG G G V++ GT T A+K + +++ L AQ ++ L H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRH 72
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y +V+E+ S G+L + + KY A+++ + Y+
Sbjct: 73 EKLVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ V+RDL+ N+LV + ++DF L+
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 348 DWWTFGIFLYEL-LHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKE 406
D W+FGI L EL G P+ G NR L + V + R P P+ DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 407 PHKR 410
P +R
Sbjct: 256 PEER 259
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 35/148 (23%)
Query: 304 GPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAV-----DWWTFGIFLYE 358
G C + PEL+ G+ EY+APE++ +++ D W+ G+ LY
Sbjct: 168 GDCSPISTPELLTP---------CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYI 218
Query: 359 LLHGTTPFKGQ--------------GNRATLFNVVGQ-PLRFPET--PQVSFVARDLIRG 401
LL G PF G+ + LF + + FP+ +S A+DLI
Sbjct: 219 LLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISK 278
Query: 402 LLVKEPHKRIAYKRGATEIKQHPFFEGV 429
LLV++ +R++ A ++ QHP+ +G
Sbjct: 279 LLVRDAKQRLS----AAQVLQHPWVQGC 302
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 11/130 (8%)
Query: 118 TNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD--HPFLPTLYSYFETDKFYCLVMEF 175
T+ +A+K+++K R+++ R E E+L L + + E D+FY LV E
Sbjct: 37 TSQEYAVKIIEKQPGHIRSRVFR---EVEMLYQCQGHRNVLELIEFFEEEDRFY-LVFEK 92
Query: 176 CSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGH- 234
GG++ S K+ ++F E A +V AL++LH GI +RDLKPEN+L
Sbjct: 93 MRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQV 150
Query: 235 --IMLSDFDL 242
+ + DFDL
Sbjct: 151 SPVKICDFDL 160
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 5/153 (3%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
S F+ L++LG G +VY + T Y A+K + S A E ++ L H
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKELKH 62
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGG---NLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
+ LY T+ LV EF + S + + ++F ++L L
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ H I++RDLKP+N+L+ G + L DF L+
Sbjct: 123 FCHENKILHRDLKPQNLLINKRGQLKLGDFGLA 155
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRG-EGHGSAVD 348
+L +K+ + DFG L P N S S V T Y AP+++ G + +++D
Sbjct: 139 LLINKRGQLKLGDFG------LARAFGIPVNTFS-SEVVTLWYRAPDVLMGSRTYSTSID 191
Query: 349 WWTFGIFLYELLHGTTPFKGQGNRATL---FNVVGQP 382
W+ G L E++ G F G + L F+++G P
Sbjct: 192 IWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTP 228
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 67/144 (46%), Gaps = 10/144 (6%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLL--RAQTEREILGLLDHPFLPTL 159
LG G G V + + T FA+K + A R L RA I+ ++D L
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQCPHIVRIVD--VYENL 127
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
Y+ K +V E GG L S Q + ++ FTE A + A++YLH + I +
Sbjct: 128 YA---GRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAH 184
Query: 220 RDLKPENVLV---RDEGHIMLSDF 240
RD+KPEN+L R + L+DF
Sbjct: 185 RDVKPENLLYTSKRPNAILKLTDF 208
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 43/101 (42%), Gaps = 10/101 (9%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRA------TLFNVVGQPLRF 385
Y+APE++ E + + D W+ G+ Y LL G PF A T
Sbjct: 229 YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPN 288
Query: 386 PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
PE +VS + LIR LL EP +R TE HP+
Sbjct: 289 PEWSEVSEEVKXLIRNLLKTEPTQRXT----ITEFXNHPWI 325
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+ RL +LG G G V++ GT T A+K + +++ L AQ ++ L H
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRH 65
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y +V E+ S G+L + + KY A+++ + Y+
Sbjct: 66 EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 124
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ V+RDL+ N+LV + ++DF L+
Sbjct: 125 RMNYVHRDLRAANILVGENLVCKVADFGLA 154
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 348 DWWTFGIFLYEL-LHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKE 406
D W+FGI L EL G P+ G NR L + V + R P P+ DL+ KE
Sbjct: 190 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 248
Query: 407 PHKR 410
P +R
Sbjct: 249 PEER 252
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 35/148 (23%)
Query: 304 GPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAV-----DWWTFGIFLYE 358
G C + PEL+ G+ EY+APE++ +++ D W+ G+ LY
Sbjct: 168 GDCSPISTPELLTP---------CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYI 218
Query: 359 LLHGTTPFKGQ--------------GNRATLFNVVGQ-PLRFPET--PQVSFVARDLIRG 401
LL G PF G+ + LF + + FP+ +S A+DLI
Sbjct: 219 LLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISK 278
Query: 402 LLVKEPHKRIAYKRGATEIKQHPFFEGV 429
LLV++ +R++ A ++ QHP+ +G
Sbjct: 279 LLVRDAKQRLS----AAQVLQHPWVQGC 302
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 118 TNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD--HPFLPTLYSYFETDKFYCLVMEF 175
T+ +A+K+++K R+++ R E E+L L + + E D+FY LV E
Sbjct: 37 TSQEYAVKIIEKQPGHIRSRVFR---EVEMLYQCQGHRNVLELIEFFEEEDRFY-LVFEK 92
Query: 176 CSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGH- 234
GG++ S K+ ++F E A +V AL++LH GI +RDLKPEN+L
Sbjct: 93 MRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQV 150
Query: 235 --IMLSDFDL 242
+ + DF L
Sbjct: 151 SPVKICDFGL 160
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 24/160 (15%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGLLD 152
NF+ ++++G G G VY + T A+K K L + + + + REI L L+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKELN 59
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA---------RFFAS 203
HP + L T+ LV EF LH Q K F + +A + +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSYLF 109
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 283 ----HPFFQDVT 290
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 10/163 (6%)
Query: 90 PIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
P ++ +L +G G G + + K +D S+ K + +E +L
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV-SEVNLLR 60
Query: 150 LLDHPFLPTLYSYF--ETDKFYCLVMEFCSGGNLHSLRQK--QPNKYFTEDAARFFASEV 205
L HP + Y T+ +VME+C GG+L S+ K + +Y E+ +++
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 206 LLALEYLHMLG-----IVYRDLKPENVLVRDEGHIMLSDFDLS 243
LAL+ H +++RDLKP NV + + ++ L DF L+
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+ RL +LG G G V++ GT T A+K + +++ L AQ ++ L H
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHE 239
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
L LY+ + Y +V E+ S G+L + + KY A+++ + Y+
Sbjct: 240 KLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ V+RDL+ N+LV + ++DF L+
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 348 DWWTFGIFLYEL-LHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKE 406
D W+FGI L EL G P+ G NR L + V + R P P+ DL+ KE
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 407 PHKR 410
P +R
Sbjct: 422 PEER 425
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+ +L+KRLG G G V++ G NT A+K + +++ + L AQ I+ L H
Sbjct: 9 ESLQLIKRLGNGQFGEVWMGTWNG-NTKVAIKTLKPGTMSPESFLEEAQ----IMKKLKH 63
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y +V E+ + G+L + + A++V + Y+
Sbjct: 64 DKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 122
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++RDL+ N+LV + ++DF L+
Sbjct: 123 RMNYIHRDLRSANILVGNGLICKIADFGLA 152
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 348 DWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKE 406
D W+FGI L EL+ G P+ G NR L V + R P +L+ K+
Sbjct: 188 DVWSFGILLTELVTKGRVPYPGMNNREVL-EQVERGYRMPCPQDCPISLHELMIHCWKKD 246
Query: 407 PHKR 410
P +R
Sbjct: 247 PEER 250
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 10/163 (6%)
Query: 90 PIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
P ++ +L +G G G + + K +D S+ K + +E +L
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV-SEVNLLR 60
Query: 150 LLDHPFLPTLYSYF--ETDKFYCLVMEFCSGGNLHSLRQK--QPNKYFTEDAARFFASEV 205
L HP + Y T+ +VME+C GG+L S+ K + +Y E+ +++
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 206 LLALEYLHMLG-----IVYRDLKPENVLVRDEGHIMLSDFDLS 243
LAL+ H +++RDLKP NV + + ++ L DF L+
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 10/163 (6%)
Query: 90 PIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
P ++ +L +G G G + + K +D S+ K + +E +L
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV-SEVNLLR 60
Query: 150 LLDHPFLPTLYSYF--ETDKFYCLVMEFCSGGNLHSLRQK--QPNKYFTEDAARFFASEV 205
L HP + Y T+ +VME+C GG+L S+ K + +Y E+ +++
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 206 LLALEYLHMLG-----IVYRDLKPENVLVRDEGHIMLSDFDLS 243
LAL+ H +++RDLKP NV + + ++ L DF L+
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+ RL +LG G G V++ GT T A+K + +++ L AQ ++ L H
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHE 239
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
L LY+ + Y +V E+ S G+L + + KY A+++ + Y+
Sbjct: 240 KLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ V+RDL+ N+LV + ++DF L+
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 348 DWWTFGIFLYEL-LHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKE 406
D W+FGI L EL G P+ G NR L + V + R P P+ DL+ KE
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 407 PHKR 410
P +R
Sbjct: 422 PEER 425
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+ RL +LG G G V++ GT T A+K + +++ L AQ ++ L H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRH 72
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y +V E+ S G+L + + KY A+++ + Y+
Sbjct: 73 EKLVQLYAVVSEEPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ V+RDL+ N+LV + ++DF L+
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 348 DWWTFGIFLYEL-LHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKE 406
D W+FGI L EL G P+ G NR L + V + R P P+ DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 407 PHKR 410
P +R
Sbjct: 256 PEER 259
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+ RL +LG G G V++ GT T A+K + +++ L AQ ++I H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKI----RH 72
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y +V E+ S G+L + + KY A+++ + Y+
Sbjct: 73 EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ V+RDL+ N+LV + ++DF L+
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 348 DWWTFGIFLYEL-LHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKE 406
D W+FGI L EL G P+ G NR L + V + R P P+ DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 407 PHKR 410
P +R
Sbjct: 256 PEER 259
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 124/334 (37%), Gaps = 81/334 (24%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
S+F + LG G G V + Y+A+K + + KL +E +L L+H
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVXLLASLNH 61
Query: 154 PFLPTLYS-YFETDKFY------------CLVMEFCSGGNLHSLRQKQPNKYFTEDAARF 200
++ Y+ + E F + E+C L+ L + ++ R
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 201 FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXX 260
F ++L AL Y+H GI++R+LKP N+ + + ++ + DF L+ S ++K
Sbjct: 122 F-RQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILK------ 174
Query: 261 XXXXXXXXXILNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTN 320
L S+ S + +G A
Sbjct: 175 ------------------------------LDSQNLPGSSDNLTSAIGTA---------- 194
Query: 321 VRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVV 379
Y+A E++ G GH +D ++ GI +E ++ PF R + +
Sbjct: 195 ----------XYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILKKL 241
Query: 380 -GQPLRFPE--TPQVSFVARDLIRGLLVKEPHKR 410
+ FP V + +IR L+ +P+KR
Sbjct: 242 RSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKR 275
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+ RL +LG G G V++ GT T A+K + +++ L AQ ++ L H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRH 72
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y +V E+ S G+L + + KY A+++ + Y+
Sbjct: 73 EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ V+RDL+ N+LV + ++DF L+
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 348 DWWTFGIFLYEL-LHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKE 406
D W+FGI L EL G P+ G NR L + V + R P P+ DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 407 PHKR 410
P +R
Sbjct: 256 PEER 259
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+ RL +LG G G V++ GT T A+K + +++ L AQ ++ L H
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRH 61
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y +V E+ S G+L + + KY A+++ + Y+
Sbjct: 62 EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 120
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ V+RDL+ N+LV + ++DF L+
Sbjct: 121 RMNYVHRDLRAANILVGENLVCKVADFGLA 150
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 348 DWWTFGIFLYEL-LHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKE 406
D W+FGI L EL G P+ G NR L + V + R P P+ DL+ K+
Sbjct: 186 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 244
Query: 407 PHKR 410
P +R
Sbjct: 245 PEER 248
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
++ +++LG G V LVE ++A+K + R + AQ E ++ L +HP
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREE---AQREADMHRLFNHP 86
Query: 155 FLPTLYSYFETDKFY----CLVMEFCSGGNLHSL--RQKQPNKYFTEDAARFFASEVLLA 208
+ L +Y ++ L++ F G L + R K + TED + +
Sbjct: 87 NILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRG 146
Query: 209 LEYLHMLGIVYRDLKPENVLVRDEGHIMLSDF 240
LE +H G +RDLKP N+L+ DEG +L D
Sbjct: 147 LEAIHAKGYAHRDLKPTNILLGDEGQPVLMDL 178
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+ RL +LG G G V++ GT T A+K + +++ L AQ ++ L H
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRH 63
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y +V E+ S G+L + + KY A+++ + Y+
Sbjct: 64 EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 122
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ V+RDL+ N+LV + ++DF L+
Sbjct: 123 RMNYVHRDLRAANILVGENLVCKVADFGLA 152
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 348 DWWTFGIFLYEL-LHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKE 406
D W+FGI L EL G P+ G NR L + V + R P P+ DL+ K+
Sbjct: 188 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 246
Query: 407 PHKR 410
P +R
Sbjct: 247 PEER 250
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 95 NFRLLKRLGYGDIGSVYLVELR--GTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
+ + + +LG G+ GSV L G NT A+ + + + ++ Q E +IL L
Sbjct: 12 HLKYISQLGKGNFGSVELCRYDPLGDNT-GALVAVKQLQHSGPDQQRDFQREIQILKALH 70
Query: 153 HPFLPTL--YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF--FASEVLLA 208
F+ SY + LVME+ G L Q+ + DA+R ++S++
Sbjct: 71 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL---DASRLLLYSSQICKG 127
Query: 209 LEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL V+RDL N+LV E H+ ++DF L+
Sbjct: 128 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 162
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 99/267 (37%), Gaps = 76/267 (28%)
Query: 101 RLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLY 160
RLG G G V+ ++ + T A+K + R ++ R + GL P + LY
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEVFRVEELVACAGL-SSPRIVPLY 130
Query: 161 SYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYR 220
+ + ME GG+L L ++ ED A ++ + L LEYLH I++
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHG 188
Query: 221 DLKPENVLVRDEG-HIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILNDEYAVHG 279
D+K +NVL+ +G L DF +L
Sbjct: 189 DVKADNVLLSSDGSRAALCDFGHAL----------------------------------- 213
Query: 280 CMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIR 339
C+QP +L D+ P GT ++APE++
Sbjct: 214 CLQPDGLGKSLL--------TGDYIP----------------------GTETHMAPEVVM 243
Query: 340 GEGHGSAVDWWTFGIFLYELLHGTTPF 366
G+ + VD W+ + +L+G P+
Sbjct: 244 GKPCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 24/165 (14%)
Query: 90 PIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI-- 147
P + NF+ ++++G G G VY + T A+K K L + + + + REI
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISL 58
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA--------- 198
L L+HP + L T+ LV E Q K F + +A
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEHVD----------QDLKKFMDASALTGIPLPLI 108
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ + ++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 287 ----HPFFQDVT 294
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 95 NFRLLKRLGYGDIGSVYLVELR--GTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
+ + + +LG G+ GSV L G NT A+ + + + ++ Q E +IL L
Sbjct: 11 HLKYISQLGKGNFGSVELCRYDPLGDNT-GALVAVKQLQHSGPDQQRDFQREIQILKALH 69
Query: 153 HPFLPTL--YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF--FASEVLLA 208
F+ SY + LVME+ G L Q+ + DA+R ++S++
Sbjct: 70 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL---DASRLLLYSSQICKG 126
Query: 209 LEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL V+RDL N+LV E H+ ++DF L+
Sbjct: 127 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 161
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 10/160 (6%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD-KASLASRNKLLRAQTEREILG 149
I ++ L + +G G V A+K ++ + S ++LL+ E + +
Sbjct: 7 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLK---EIQAMS 63
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSL------RQKQPNKYFTEDAARFFAS 203
HP + + Y+ F LVM+ SGG++ + + + + E
Sbjct: 64 QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 123
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
EVL LEYLH G ++RD+K N+L+ ++G + ++DF +S
Sbjct: 124 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 163
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 17/114 (14%)
Query: 325 SFVGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPF-KGQGNRATLFNVVGQP 382
+FVGT ++APE++ G+ D W+FGI EL G P+ K + + + P
Sbjct: 180 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP 239
Query: 383 LRFPETPQ---------VSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
Q SF R +I L K+P KR A E+ +H FF+
Sbjct: 240 PSLETGVQDKEMLKKYGKSF--RKMISLCLQKDPEKRPT----AAELLRHKFFQ 287
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+ RL +LG G G V++ GT T A+K + +++ L AQ ++ L H
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRHE 239
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
L LY+ + Y +V E+ S G+L + + KY A+++ + Y+
Sbjct: 240 KLVQLYAVVSEEPIY-IVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ V+RDL+ N+LV + ++DF L+
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 348 DWWTFGIFLYEL-LHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKE 406
D W+FGI L EL G P+ G NR L + V + R P P+ DL+ KE
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 407 PHKR 410
P +R
Sbjct: 422 PEER 425
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 95 NFRLLKRLGYGDIGSVYLVELR--GTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
+ + + +LG G+ GSV L G NT A+ + + + ++ Q E +IL L
Sbjct: 24 HLKYISQLGKGNFGSVELCRYDPLGDNT-GALVAVKQLQHSGPDQQRDFQREIQILKALH 82
Query: 153 HPFLPTL--YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF--FASEVLLA 208
F+ SY + LVME+ G L Q+ + DA+R ++S++
Sbjct: 83 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL---DASRLLLYSSQICKG 139
Query: 209 LEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL V+RDL N+LV E H+ ++DF L+
Sbjct: 140 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 174
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTE--REILGLLDHPFLPTL 159
+ +G +G +YL R N V+ K + S + +A R+ L + HP + +
Sbjct: 88 IAHGGLGWIYLALDRNVN---GRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQI 144
Query: 160 YSYFE-----TDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+++ E D +VME+ G SL++ + K +A + E+L AL YLH
Sbjct: 145 FNFVEHTDRHGDPVGYIVMEYVGG---QSLKRSKGQKLPVAEAIAYLL-EILPALSYLHS 200
Query: 215 LGIVYRDLKPENVLVRDE 232
+G+VY DLKPEN+++ +E
Sbjct: 201 IGLVYNDLKPENIMLTEE 218
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 80/162 (49%), Gaps = 23/162 (14%)
Query: 85 SLRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVM-----------DKASLA 133
+ +G P + + L+++LG+G +V+L + NT+ AMK++ D+ L
Sbjct: 10 AFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLL 69
Query: 134 SR-----NKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQ 188
R N + IL LLDH +++ + + +++ G NL +L +K
Sbjct: 70 QRVNDADNTKEDSMGANHILKLLDH------FNHKGPNGVHVVMVFEVLGENLLALIKKY 123
Query: 189 PNKYFTEDAARFFASEVLLALEYLH-MLGIVYRDLKPENVLV 229
++ + + ++LL L+Y+H GI++ D+KPENVL+
Sbjct: 124 EHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM 165
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 13/89 (14%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPF---------KGQGNRATLFN 377
+ T EY +PE++ G G D W+ ++EL+ G F K + A +
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255
Query: 378 VVGQ----PLRFPETPQVSFVARDLIRGL 402
++G+ LR + + F +R L+R +
Sbjct: 256 LLGELPSYLLRNGKYTRTFFNSRGLLRNI 284
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 10/160 (6%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD-KASLASRNKLLRAQTEREILG 149
I ++ L + +G G V A+K ++ + S ++LL+ E + +
Sbjct: 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLK---EIQAMS 68
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSL------RQKQPNKYFTEDAARFFAS 203
HP + + Y+ F LVM+ SGG++ + + + + E
Sbjct: 69 QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 128
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
EVL LEYLH G ++RD+K N+L+ ++G + ++DF +S
Sbjct: 129 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 17/114 (14%)
Query: 325 SFVGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPF-KGQGNRATLFNVVGQP 382
+FVGT ++APE++ G+ D W+FGI EL G P+ K + + + P
Sbjct: 185 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP 244
Query: 383 LRFPETPQ---------VSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
Q SF R +I L K+P KR A E+ +H FF+
Sbjct: 245 PSLETGVQDKEMLKKYGKSF--RKMISLCLQKDPEKRPT----AAELLRHKFFQ 292
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 4/154 (2%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
+++ L +G G G V+ + R T A+K M ++ NK + + +L D
Sbjct: 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLD-VVLKSHD 82
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
P++ + F T+ + ME G +K+ E ++ AL YL
Sbjct: 83 CPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYL 140
Query: 213 -HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLR 245
G+++RD+KP N+L+ + G I L DF +S R
Sbjct: 141 KEKHGVIHRDVKPSNILLDERGQIKLCDFGISGR 174
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 25/160 (15%)
Query: 278 HGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEI 337
HG + IL ++ + DFG + G L + A+ + G Y+APE
Sbjct: 144 HGVIHRDVKPSNILLDERGQIKLCDFG--ISGRLVDDKAKDRSA------GCAAYMAPER 195
Query: 338 I-----RGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR-----FPE 387
I + D W+ GI L EL G P+K N T F V+ + L+ P
Sbjct: 196 IDPPDPTKPDYDIRADVWSLGISLVELATGQFPYK---NCKTDFEVLTKVLQEEPPLLPG 252
Query: 388 TPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
S + ++ L K+ KR Y + + +H F +
Sbjct: 253 HMGFSGDFQSFVKDCLTKDHRKRPKYNK----LLEHSFIK 288
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+ RL +LG G G V++ GT T A+K + +++ L AQ ++ L H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRH 72
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y +V E+ S G L + + KY A+++ + Y+
Sbjct: 73 EKLVQLYAVVSEEPIY-IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ V+RDL+ N+LV + ++DF L+
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 348 DWWTFGIFLYEL-LHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKE 406
D W+FGI L EL G P+ G NR L + V + R P P+ DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 407 PHKR 410
P +R
Sbjct: 256 PEER 259
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 80/162 (49%), Gaps = 23/162 (14%)
Query: 85 SLRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVM-----------DKASLA 133
+ +G P + + L+++LG+G +V+L + NT+ AMK++ D+ L
Sbjct: 10 AFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLL 69
Query: 134 SR-----NKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQ 188
R N + IL LLDH +++ + + +++ G NL +L +K
Sbjct: 70 QRVNDADNTKEDSMGANHILKLLDH------FNHKGPNGVHVVMVFEVLGENLLALIKKY 123
Query: 189 PNKYFTEDAARFFASEVLLALEYLH-MLGIVYRDLKPENVLV 229
++ + + ++LL L+Y+H GI++ D+KPENVL+
Sbjct: 124 EHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM 165
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 13/89 (14%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPF---------KGQGNRATLFN 377
+ T EY +PE++ G G D W+ ++EL+ G F K + A +
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255
Query: 378 VVGQ----PLRFPETPQVSFVARDLIRGL 402
++G+ LR + + F +R L+R +
Sbjct: 256 LLGELPSYLLRNGKYTRTFFNSRGLLRNI 284
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 6/148 (4%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+ RL +LG G G V++ GT T A+K + +++ L AQ ++ L H
Sbjct: 186 SLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGNMSPEAFLQEAQ----VMKKLRHE 240
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
L LY+ + Y +V E+ S G+L + + KY A+++ + Y+
Sbjct: 241 KLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 299
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDL 242
+ V+RDL+ N+LV + ++DF L
Sbjct: 300 MNYVHRDLRAANILVGENLVCKVADFGL 327
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 348 DWWTFGIFLYEL-LHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKE 406
D W+FGI L EL G P+ G NR L + V + R P P+ DL+ K+
Sbjct: 364 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 422
Query: 407 PHKR 410
P +R
Sbjct: 423 PEER 426
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+ RL +LG G G V++ GT T A+K + +++ L AQ ++ L H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRH 72
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y +V E+ S G+L + + KY A+++ + Y+
Sbjct: 73 EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ V+RDL N+LV + ++DF L+
Sbjct: 132 RMNYVHRDLAAANILVGENLVCKVADFGLA 161
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 348 DWWTFGIFLYEL-LHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKE 406
D W+FGI L EL G P+ G NR L + V + R P P+ DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 407 PHKR 410
P +R
Sbjct: 256 PEER 259
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 99/267 (37%), Gaps = 76/267 (28%)
Query: 101 RLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLY 160
R+G G G V+ ++ + T A+K + R ++ R + GL P + LY
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEVFRVEELVACAGL-SSPRIVPLY 116
Query: 161 SYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYR 220
+ + ME GG+L L ++ ED A ++ + L LEYLH I++
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHG 174
Query: 221 DLKPENVLVRDEG-HIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILNDEYAVHG 279
D+K +NVL+ +G L DF +L
Sbjct: 175 DVKADNVLLSSDGSRAALCDFGHAL----------------------------------- 199
Query: 280 CMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIR 339
C+QP +L D+ P GT ++APE++
Sbjct: 200 CLQPDGLGKSLL--------TGDYIP----------------------GTETHMAPEVVM 229
Query: 340 GEGHGSAVDWWTFGIFLYELLHGTTPF 366
G+ + VD W+ + +L+G P+
Sbjct: 230 GKPCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 16/130 (12%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+DFG C P + + VGT ++APE++ + +G VD W+ GI E++
Sbjct: 158 TDFGFCA-------QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
Query: 361 HGTTPFKGQGNRATLFNVV--GQP-LRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGA 417
G P+ + L+ + G P L+ PE ++S + RD + L + KR A
Sbjct: 211 EGEPPYLNENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLDMDVEKR----GSA 264
Query: 418 TEIKQHPFFE 427
E+ QH F +
Sbjct: 265 KELLQHQFLK 274
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTERE-----ILGLLDHP 154
+++G G G+VY AM V +A R L+ Q ++E IL + ++
Sbjct: 26 EKIGQGASGTVYT----------AMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK 75
Query: 155 ---FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
+ L SY D+ + +VME+ +GG+L + + E E L ALE+
Sbjct: 76 NPNIVNYLDSYLVGDELW-VVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEF 131
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDF 240
LH +++RD+K +N+L+ +G + L+DF
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDGSVKLTDF 160
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 324 MSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPL 383
MS G + ++APE+IR D W++G+ L+ELL G PF+G A + V L
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKL 231
Query: 384 RFP 386
P
Sbjct: 232 ALP 234
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 7/142 (4%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
I + L + +G G G VY G D S+ + + E ++ +
Sbjct: 4 IDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQT-IENVRQEAKLFAM 62
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
L HP + L + CLVMEF GG L+ + K D +A ++ +
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMN 119
Query: 211 YLH---MLGIVYRDLKPENVLV 229
YLH ++ I++RDLK N+L+
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILI 141
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 102 LGYGDIGSVY--LVELRGTNTYFAMKVMDKAS-LASRNKLLRAQTEREILGLLDHPFLPT 158
LG G+ GSV + +R A+KV+ + + A +++R E +I+ LD+P++
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR---EAQIMHQLDNPYIVR 74
Query: 159 LYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIV 218
L + + LVME GG LH + + + A +V + ++YL V
Sbjct: 75 LIGVCQAEALM-LVMEMAGGGPLHKFLVGKREEIPVSNVAELL-HQVSMGMKYLEEKNFV 132
Query: 219 YRDLKPENVLVRDEGHIMLSDFDLS 243
+RDL NVL+ + + +SDF LS
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLS 157
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKG-QGNRATLFNVVGQPLRF-PE 387
++ APE I S D W++G+ ++E L +G P+K +G F G+ + PE
Sbjct: 178 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPE 237
Query: 388 TP 389
P
Sbjct: 238 CP 239
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 16/130 (12%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+DFG C P + + VGT ++APE++ + +G VD W+ GI E++
Sbjct: 159 TDFGFCA-------QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 211
Query: 361 HGTTPFKGQGNRATLFNVV--GQP-LRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGA 417
G P+ + L+ + G P L+ PE ++S + RD + L + KR A
Sbjct: 212 EGEPPYLNENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKR----GSA 265
Query: 418 TEIKQHPFFE 427
E+ QH F +
Sbjct: 266 KELIQHQFLK 275
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTERE-----ILGLLDHP 154
+++G G G+VY AM V +A R L+ Q ++E IL + ++
Sbjct: 27 EKIGQGASGTVYT----------AMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK 76
Query: 155 ---FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
+ L SY D+ + +VME+ +GG+L + + E E L ALE+
Sbjct: 77 NPNIVNYLDSYLVGDELW-VVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEF 132
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDF 240
LH +++R++K +N+L+ +G + L+DF
Sbjct: 133 LHSNQVIHRNIKSDNILLGMDGSVKLTDF 161
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 24/162 (14%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGL 150
+ NF+ ++++G G G VY + T A+ K L + + + + REI L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALX---KIRLDTETEGVPSTAIREISLLKE 58
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA---------RFF 201
L+HP + L T+ LV EF LH Q K F + +A + +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 108
Query: 202 ASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 284 ----HPFFQDVT 291
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 24/162 (14%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGL 150
+ NF+ ++++G G G VY + T A+ K L + + + + REI L
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALX---KIRLDTETEGVPSTAIREISLLKE 57
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA---------RFF 201
L+HP + L T+ LV EF LH Q K F + +A + +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSY 107
Query: 202 ASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 283 ----HPFFQDVT 290
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 99/267 (37%), Gaps = 76/267 (28%)
Query: 101 RLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLY 160
R+G G G V+ ++ + T A+K + R ++ R + GL P + LY
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKV-------RLEVFRVEELVACAGL-SSPRIVPLY 132
Query: 161 SYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYR 220
+ + ME GG+L L ++ ED A ++ + L LEYLH I++
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHG 190
Query: 221 DLKPENVLVRDEG-HIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILNDEYAVHG 279
D+K +NVL+ +G L DF +L
Sbjct: 191 DVKADNVLLSSDGSRAALCDFGHAL----------------------------------- 215
Query: 280 CMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIR 339
C+QP +L D+ P GT ++APE++
Sbjct: 216 CLQPDGLGKSLL--------TGDYIP----------------------GTETHMAPEVVM 245
Query: 340 GEGHGSAVDWWTFGIFLYELLHGTTPF 366
G+ + VD W+ + +L+G P+
Sbjct: 246 GKPCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
+ + +RLG G G V + T A+K + L+ +N+ R E +I+ L+HP
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC-RQELSPKNRE-RWCLEIQIMKKLNHPN 74
Query: 156 L------PTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQPNKYFTEDAARFFASEVLLA 208
+ P + L ME+C GG+L L Q + E R S++ A
Sbjct: 75 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 134
Query: 209 LEYLHMLGIVYRDLKPENVLVR 230
L YLH I++RDLKPEN++++
Sbjct: 135 LRYLHENRIIHRDLKPENIVLQ 156
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 325 SFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPF 366
FVGT +YLAPE++ + + VD+W+FG +E + G PF
Sbjct: 183 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
+ + +RLG G G V + T A+K + L+ +N+ R E +I+ L+HP
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC-RQELSPKNRE-RWCLEIQIMKKLNHPN 73
Query: 156 L------PTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQPNKYFTEDAARFFASEVLLA 208
+ P + L ME+C GG+L L Q + E R S++ A
Sbjct: 74 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133
Query: 209 LEYLHMLGIVYRDLKPENVLVR 230
L YLH I++RDLKPEN++++
Sbjct: 134 LRYLHENRIIHRDLKPENIVLQ 155
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 325 SFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPF 366
FVGT +YLAPE++ + + VD+W+FG +E + G PF
Sbjct: 182 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+ LK LG G G V + RG A+K++ + S+ S ++ + E +++ L H
Sbjct: 25 DLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM-SEDEFIE---EAKVMMNLSHE 79
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
L LY + ++ E+ + G L + ++ +++ T+ +V A+EYL
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 138
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV D+G + +SDF LS
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 15/177 (8%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--- 147
+ S + + +G G G+VY + + A+K + + L T RE+
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 148 --LGLLDHPFLPTLYSYFETDKF-----YCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF 200
L +HP + L T + LV E +L + K P + +
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKD 124
Query: 201 FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL----SLRCSVSPTLV 253
+ L L++LH IV+RDLKPEN+LV G + L+DF L S + +++P +V
Sbjct: 125 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV 181
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 25/115 (21%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVGQPL 383
V T Y APE++ + + VD W+ G E+ F G L F+++G P
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 239
Query: 384 R-------------FPE---------TPQVSFVARDLIRGLLVKEPHKRIAYKRG 416
FP P++ L+ +L PHKRI+ R
Sbjct: 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRA 294
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 102 LGYGDIGSVY--LVELRGTNTYFAMKVMDKAS-LASRNKLLRAQTEREILGLLDHPFLPT 158
LG G+ GSV + +R A+KV+ + + A +++R E +I+ LD+P++
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR---EAQIMHQLDNPYIVR 400
Query: 159 LYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIV 218
L + + LVME GG LH + + + A +V + ++YL V
Sbjct: 401 LIGVCQAEALM-LVMEMAGGGPLHKFLVGKREEIPVSNVAELL-HQVSMGMKYLEEKNFV 458
Query: 219 YRDLKPENVLVRDEGHIMLSDFDLS 243
+R+L NVL+ + + +SDF LS
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLS 483
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKG-QGNRATLFNVVGQPLRFP 386
++ APE I S D W++G+ ++E L +G P+K +G F G+ + P
Sbjct: 504 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP 561
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+ LK LG G G V + RG A+K++ + S+ S ++ + E +++ L H
Sbjct: 25 DLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM-SEDEFIE---EAKVMMNLSHE 79
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
L LY + ++ E+ + G L + ++ +++ T+ +V A+EYL
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 138
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV D+G + +SDF LS
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 8/115 (6%)
Query: 129 KASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQ 188
+A++ +LLR + ++ L+D LY+ E K Y +VME+C G + +
Sbjct: 50 EANVKKEIQLLRRLRHKNVIQLVD-----VLYNE-EKQKMY-MVMEYCVCG-MQEMLDSV 101
Query: 189 PNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
P K F A + +++ LEYLH GIV++D+KP N+L+ G + +S ++
Sbjct: 102 PEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVA 156
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 328 GTHEYLAPEIIRGEG--HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF 385
G+ + PEI G G VD W+ G+ LY + G PF+G N LF +G+ +
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD-NIYKLFENIGKG-SY 230
Query: 386 PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
DL++G+L EP KR + + +I+QH +F
Sbjct: 231 AIPGDCGPPLSDLLKGMLEYEPAKRFSIR----QIRQHSWF 267
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGL 150
+ ++ L+++G G G VY + ++ + + + L + ++ + + REI L
Sbjct: 20 MEKYQKLEKVGEGTYGVVY----KAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA-RFFASEVLLAL 209
L HP + +L +++ LV EF L + NK +D+ + + ++L +
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE---NKTGLQDSQIKIYLYQLLRGV 132
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ H I++RDLKP+N+L+ +G + L+DF L+
Sbjct: 133 AHCHQHRILHRDLKPQNLLINSDGALKLADFGLA 166
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 42/160 (26%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSF-VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYE 358
+DFG +P VRS + V T Y AP+++ G + + ++VD W+ G E
Sbjct: 161 ADFGLARAFGIP--------VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAE 212
Query: 359 LLHGTTPFKGQGNRATL---FNVVGQP-------------------LRFPETPQVSFV-- 394
++ G F G + L F+++G P F + P S +
Sbjct: 213 MITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPG 272
Query: 395 ----ARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVN 430
DL+ +L +P+KRI+ A + HP+F+ ++
Sbjct: 273 FCQEGIDLLSNMLCFDPNKRIS----ARDAMNHPYFKDLD 308
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGL 150
+ ++ L+++G G G VY + ++ + + + L + ++ + + REI L
Sbjct: 20 MEKYQKLEKVGEGTYGVVY----KAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA-RFFASEVLLAL 209
L HP + +L +++ LV EF L + NK +D+ + + ++L +
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE---NKTGLQDSQIKIYLYQLLRGV 132
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ H I++RDLKP+N+L+ +G + L+DF L+
Sbjct: 133 AHCHQHRILHRDLKPQNLLINSDGALKLADFGLA 166
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 42/160 (26%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSF-VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYE 358
+DFG +P VRS + V T Y AP+++ G + + ++VD W+ G E
Sbjct: 161 ADFGLARAFGIP--------VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAE 212
Query: 359 LLHGTTPFKGQGNRATL---FNVVGQP-------------------LRFPETPQVSFV-- 394
++ G F G + L F+++G P F + P S +
Sbjct: 213 MITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPG 272
Query: 395 ----ARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVN 430
DL+ +L +P+KRI+ A + HP+F+ ++
Sbjct: 273 FCQEGIDLLSNMLCFDPNKRIS----ARDAMNHPYFKDLD 308
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+DFG C P + VGT ++APE++ + +G VD W+ GI E++
Sbjct: 158 TDFGFCA-------QITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
Query: 361 HGTTPFKGQGNRATLFNVV--GQP-LRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGA 417
G P+ + L+ + G P L+ PE ++S + RD + L + KR A
Sbjct: 211 EGEPPYLNENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKR----GSA 264
Query: 418 TEIKQHPFFE 427
E+ QH F +
Sbjct: 265 KELLQHQFLK 274
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTERE-----ILGLLDHP 154
+++G G G+VY AM V +A R L+ Q ++E IL + ++
Sbjct: 26 EKIGQGASGTVYT----------AMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK 75
Query: 155 ---FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
+ L SY D+ + +VME+ +GG+L + + E E L ALE+
Sbjct: 76 NPNIVNYLDSYLVGDELW-VVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEF 131
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDF 240
LH +++RD+K +N+L+ +G + L+DF
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDGSVKLTDF 160
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+DFG C P + VGT ++APE++ + +G VD W+ GI E++
Sbjct: 159 TDFGFCA-------QITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 211
Query: 361 HGTTPFKGQGNRATLFNVV--GQP-LRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGA 417
G P+ + L+ + G P L+ PE ++S + RD + L + KR A
Sbjct: 212 EGEPPYLNENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKR----GSA 265
Query: 418 TEIKQHPFFE 427
E+ QH F +
Sbjct: 266 KELIQHQFLK 275
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTERE-----ILGLLDHP 154
+++G G G+VY AM V +A R L+ Q ++E IL + ++
Sbjct: 27 EKIGQGASGTVYT----------AMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK 76
Query: 155 ---FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
+ L SY D+ + +VME+ +GG+L + + E E L ALE+
Sbjct: 77 NPNIVNYLDSYLVGDELW-VVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEF 132
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDF 240
LH +++RD+K +N+L+ +G + L+DF
Sbjct: 133 LHSNQVIHRDIKSDNILLGMDGSVKLTDF 161
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 6/140 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDK--ASLASRNKLLRAQTEREILGLL 151
+ F L+++G G+ GSV+ R +A+K K A LR +LG
Sbjct: 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG-- 68
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN--KYFTEDAARFFASEVLLAL 209
H + +S + D + E+C+GG+L + YF E + +V L
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 210 EYLHMLGIVYRDLKPENVLV 229
Y+H + +V+ D+KP N+ +
Sbjct: 129 RYIHSMSLVHMDIKPSNIFI 148
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+ RL +LG G G V++ GT T A+K + +++ L AQ ++ L H
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRH 69
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y +V E+ + G+L + + KY ++++ + Y+
Sbjct: 70 EKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ V+RDL+ N+LV + ++DF L+
Sbjct: 129 RMNYVHRDLRAANILVGENLVCKVADFGLA 158
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 348 DWWTFGIFLYEL-LHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKE 406
D W+FGI L EL G P+ G NR L + V + R P P+ DL+ KE
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 252
Query: 407 PHKR 410
P +R
Sbjct: 253 PEER 256
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+DFG C P + VGT ++APE++ + +G VD W+ GI E++
Sbjct: 158 TDFGFCA-------QITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
Query: 361 HGTTPFKGQGNRATLFNVV--GQP-LRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGA 417
G P+ + L+ + G P L+ PE ++S + RD + L + KR A
Sbjct: 211 EGEPPYLNENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLDMDVEKR----GSA 264
Query: 418 TEIKQHPFFE 427
E+ QH F +
Sbjct: 265 KELLQHQFLK 274
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTERE-----ILGLLDHP 154
+++G G G+VY AM V +A R L+ Q ++E IL + ++
Sbjct: 26 EKIGQGASGTVYT----------AMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK 75
Query: 155 ---FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
+ L SY D+ + +VME+ +GG+L + + E E L ALE+
Sbjct: 76 NPNIVNYLDSYLVGDELW-VVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEF 131
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDF 240
LH +++RD+K +N+L+ +G + L+DF
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDGSVKLTDF 160
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 24/162 (14%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGL 150
+ NF+ ++++G G G VY + T A+K K L + + + + REI L
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALK---KIRLDTETEGVPSTAIREISLLKE 57
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA---------RFF 201
L+HP + L T+ LV E ++H Q K F + +A + +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFE-----HVH-----QDLKTFMDASALTGIPLPLIKSY 107
Query: 202 ASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++L L + H +++RDLKP+N+L+ EG I L+DF L+
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 32/132 (24%)
Query: 327 VGTHEYLAPEIIRG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV---VGQP 382
V T Y APEI+ G + + +AVD W+ G E++ F G LF + +G P
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 383 LR---------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRGAT 418
FP+ + F R L+ +L +P+KRI+ K
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 419 EIKQHPFFEGVN 430
HPFF+ V
Sbjct: 283 ----HPFFQDVT 290
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 6/140 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDK--ASLASRNKLLRAQTEREILGLL 151
+ F L+++G G+ GSV+ R +A+K K A LR +LG
Sbjct: 9 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG-- 66
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN--KYFTEDAARFFASEVLLAL 209
H + +S + D + E+C+GG+L + YF E + +V L
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 210 EYLHMLGIVYRDLKPENVLV 229
Y+H + +V+ D+KP N+ +
Sbjct: 127 RYIHSMSLVHMDIKPSNIFI 146
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 6/140 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDK--ASLASRNKLLRAQTEREILGLL 151
+ F L+++G G+ GSV+ R +A+K K A LR +LG
Sbjct: 7 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG-- 64
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN--KYFTEDAARFFASEVLLAL 209
H + +S + D + E+C+GG+L + YF E + +V L
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 210 EYLHMLGIVYRDLKPENVLV 229
Y+H + +V+ D+KP N+ +
Sbjct: 125 RYIHSMSLVHMDIKPSNIFI 144
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 6/140 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDK--ASLASRNKLLRAQTEREILGLL 151
+ F L+++G G+ GSV+ R +A+K K A LR +LG
Sbjct: 9 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG-- 66
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN--KYFTEDAARFFASEVLLAL 209
H + +S + D + E+C+GG+L + YF E + +V L
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 210 EYLHMLGIVYRDLKPENVLV 229
Y+H + +V+ D+KP N+ +
Sbjct: 127 RYIHSMSLVHMDIKPSNIFI 146
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+ LK LG G G V + RG A+K++ + S+ S ++ + E +++ L H
Sbjct: 16 DLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM-SEDEFIE---EAKVMMNLSHE 70
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
L LY + ++ E+ + G L + ++ +++ T+ +V A+EYL
Sbjct: 71 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 129
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV D+G + +SDF LS
Sbjct: 130 KQFLHRDLAARNCLVNDQGVVKVSDFGLS 158
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+ RL +LG G G V++ GT T A+K + +++ L AQ ++ L H
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRH 69
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y +V E+ + G+L + + KY ++++ + Y+
Sbjct: 70 EKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ V+RDL+ N+LV + ++DF L+
Sbjct: 129 RMNYVHRDLRAANILVGENLVCKVADFGLA 158
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 348 DWWTFGIFLYEL-LHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKE 406
D W+FGI L EL G P+ G NR L + V + R P P+ DL+ KE
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 252
Query: 407 PHKR 410
P +R
Sbjct: 253 PEER 256
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 2/145 (1%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
F L+ +G+G G+VY + A+K M + S K E L L HP
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHML 215
+ + LVME+C G L + E AA L L YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA--VTHGALQGLAYLHSH 173
Query: 216 GIVYRDLKPENVLVRDEGHIMLSDF 240
+++RD+K N+L+ + G + L DF
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDF 198
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+ RL +LG G G V++ GT T A+K + +++ L AQ ++ L H
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQ----VMKKLRH 62
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + +V E+ S G+L + + KY A+++ + Y+
Sbjct: 63 EKLVQLYAVVSEEPIX-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 121
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ V+RDL+ N+LV + ++DF L+
Sbjct: 122 RMNYVHRDLRAANILVGENLVCKVADFGLA 151
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 348 DWWTFGIFLYEL-LHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKE 406
D W+FGI L EL G P+ G NR L + V + R P P+ DL+ KE
Sbjct: 187 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 245
Query: 407 PHKR 410
P +R
Sbjct: 246 PEER 249
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+ LK LG G G V + RG A+K++ + S+ S ++ + E +++ L H
Sbjct: 9 DLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM-SEDEFIE---EAKVMMNLSHE 63
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
L LY + ++ E+ + G L + ++ +++ T+ +V A+EYL
Sbjct: 64 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 122
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV D+G + +SDF LS
Sbjct: 123 KQFLHRDLAARNCLVNDQGVVKVSDFGLS 151
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+ LK LG G G V + RG A+K++ + S+ S ++ + E +++ L H
Sbjct: 10 DLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM-SEDEFIE---EAKVMMNLSHE 64
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
L LY + ++ E+ + G L + ++ +++ T+ +V A+EYL
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 123
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV D+G + +SDF LS
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 95 NFRLLKRLGYGDIGSVYLVELR--GTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
+ + + +LG G+ GSV L G NT A+ + + + ++ Q E +IL L
Sbjct: 8 HLKYISQLGKGNFGSVELCRYDPLGDNT-GALVAVKQLQHSGPDQQRDFQREIQILKALH 66
Query: 153 HPFLPTL--YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF--FASEVLLA 208
F+ SY LVME+ G L Q+ + DA+R ++S++
Sbjct: 67 SDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARL---DASRLLLYSSQICKG 123
Query: 209 LEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL V+RDL N+LV E H+ ++DF L+
Sbjct: 124 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 158
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+ LK LG G G V + RG A+K++ + S+ S ++ + E +++ L H
Sbjct: 10 DLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM-SEDEFIE---EAKVMMNLSHE 64
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
L LY + ++ E+ + G L + ++ +++ T+ +V A+EYL
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 123
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV D+G + +SDF LS
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 26/202 (12%)
Query: 67 PVKP---HTGGDVRWDAINMISLRGPPIGLS---NFRLLKRLGYGDIGSVYLVELRGTNT 120
PVK HT V + ++ R + + +++ +G G G V R T
Sbjct: 22 PVKAEPAHTAASVAAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQ 81
Query: 121 YFAMK----VMDKASLASRN----KLLRAQTEREILGLLD--HPFLPTLYSYFETDKFYC 170
A+K D + A R K+L+ I+ + D P +P Y F++
Sbjct: 82 QVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVP--YGEFKSVYVVL 139
Query: 171 LVMEFCSGGNLHSL-RQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLV 229
+ME +LH + QP T + R+F ++L L+Y+H +++RDLKP N+LV
Sbjct: 140 DLME----SDLHQIIHSSQP---LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV 192
Query: 230 RDEGHIMLSDFDLSLRCSVSPT 251
+ + + DF ++ SP
Sbjct: 193 NENCELKIGDFGMARGLCTSPA 214
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+ LK LG G G V + RG A+K++ + S+ S ++ + E +++ L H
Sbjct: 5 DLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM-SEDEFIE---EAKVMMNLSHE 59
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
L LY + ++ E+ + G L + ++ +++ T+ +V A+EYL
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 118
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV D+G + +SDF LS
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLS 147
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 131/340 (38%), Gaps = 73/340 (21%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
++++R+++ L G + L E N ++A+K +K+ L + ++ ++ +
Sbjct: 30 INDYRIIRTLNQGKFNKIILCE--KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKY 87
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
F L + YCL C G ++ + +
Sbjct: 88 DDFKNELQIITDIKNEYCLT---CEG--------------------------IITNYDEV 118
Query: 213 HMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXILN 272
+ I+Y ++ +++L DE +L D + C + ++K I N
Sbjct: 119 Y---IIYEYMENDSILKFDEYFFVL---DKNYTCFIPIQVIKCIIKSVLNSFSY---IHN 169
Query: 273 DEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEY 332
++ H ++PS IL K R SDFG E M + S GT+E+
Sbjct: 170 EKNICHRDVKPSN----ILMDKNGRVKLSDFGE------SEYMVDKKIKGSR---GTYEF 216
Query: 333 LAPEIIRGEG--HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLF-NVVGQPLRFP--- 386
+ PE E +G+ VD W+ GI LY + + PF + + LF N+ + + +P
Sbjct: 217 MPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDR 276
Query: 387 -----------ETPQVSFVAR---DLIRGLLVKEPHKRIA 412
T +F++ D ++ L K P +RI
Sbjct: 277 NHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERIT 316
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 2/145 (1%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
F L+ +G+G G+VY + A+K M + S K E L L HP
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHML 215
+ + LVME+C G L + E AA L L YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA--VTHGALQGLAYLHSH 134
Query: 216 GIVYRDLKPENVLVRDEGHIMLSDF 240
+++RD+K N+L+ + G + L DF
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDF 159
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 88 GPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
G + + +LL+ +G G+ G V L + RG A+K + + A E +
Sbjct: 187 GWALNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATAQA-----FLAEASV 239
Query: 148 LGLLDHPFLPTLYSYFETDK--FYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEV 205
+ L H L L +K Y +V E+ + G+L + + D F+ +V
Sbjct: 240 MTQLRHSNLVQLLGVIVEEKGGLY-IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 298
Query: 206 LLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
A+EYL V+RDL NVLV ++ +SDF L+ S
Sbjct: 299 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 11/78 (14%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
+L S+ N SDFG L E ++ + + ++ APE +R + + D
Sbjct: 320 VLVSEDNVAKVSDFG---------LTKEASSTQDTGKLPV-KWTAPEALREKKFSTKSDV 369
Query: 350 WTFGIFLYELLH-GTTPF 366
W+FGI L+E+ G P+
Sbjct: 370 WSFGILLWEIYSFGRVPY 387
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 26/202 (12%)
Query: 67 PVKP---HTGGDVRWDAINMISLRGPPIGLS---NFRLLKRLGYGDIGSVYLVELRGTNT 120
PVK HT V + ++ R + + +++ +G G G V R T
Sbjct: 21 PVKAEPAHTAASVAAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQ 80
Query: 121 YFAMK----VMDKASLASRN----KLLRAQTEREILGLLD--HPFLPTLYSYFETDKFYC 170
A+K D + A R K+L+ I+ + D P +P Y F++
Sbjct: 81 QVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVP--YGEFKSVYVVL 138
Query: 171 LVMEFCSGGNLHSL-RQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLV 229
+ME +LH + QP T + R+F ++L L+Y+H +++RDLKP N+LV
Sbjct: 139 DLME----SDLHQIIHSSQP---LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV 191
Query: 230 RDEGHIMLSDFDLSLRCSVSPT 251
+ + + DF ++ SP
Sbjct: 192 NENCELKIGDFGMARGLCTSPA 213
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 77/147 (52%), Gaps = 11/147 (7%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKAS-LASRNKLLRAQTEREILGLLDHPFLPTLY 160
LG G +V+ + T FA+KV + S L + +R E E+L L+H + L+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR---EFEVLKKLNHKNIVKLF 73
Query: 161 SYFE--TDKFYCLVMEFCSGGNLHSLRQKQPNKY-FTEDAARFFASEVLLALEYLHMLGI 217
+ E T + L+MEFC G+L+++ ++ N Y E +V+ + +L GI
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 218 VYRDLKPENVL--VRDEGHIM--LSDF 240
V+R++KP N++ + ++G + L+DF
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDF 160
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 88 GPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
G + + +LL+ +G G+ G V L + RG A+K + + A E +
Sbjct: 6 GWALNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATAQA-----FLAEASV 58
Query: 148 LGLLDHPFLPTLYSYFETDK--FYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEV 205
+ L H L L +K Y +V E+ + G+L + + D F+ +V
Sbjct: 59 MTQLRHSNLVQLLGVIVEEKGGLY-IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 117
Query: 206 LLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
A+EYL V+RDL NVLV ++ +SDF L+ S
Sbjct: 118 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 159
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
+L S+ N SDFG L E ++ + + ++ APE +R + D
Sbjct: 139 VLVSEDNVAKVSDFG---------LTKEASSTQDTGKLPV-KWTAPEALREAAFSTKSDV 188
Query: 350 WTFGIFLYELLH-GTTPF 366
W+FGI L+E+ G P+
Sbjct: 189 WSFGILLWEIYSFGRVPY 206
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRN-----KLLRAQTEREILGLLDHPFL 156
LG G G V+ + N +K + K + KL + E IL ++H +
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 157 PTLYSYFETDKFYCLVME-FCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHML 215
+ FE F+ LVME SG +L + + P E A + +++ A+ YL +
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR--LDEPLASYIFRQLVSAVGYLRLK 149
Query: 216 GIVYRDLKPENVLVRDEGHIMLSDF 240
I++RD+K EN+++ ++ I L DF
Sbjct: 150 DIIHRDIKDENIVIAEDFTIKLIDF 174
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Query: 325 SFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPL 383
+F GT EY APE++ G + G ++ W+ G+ LY L+ PF L V +
Sbjct: 188 TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF------CELEETVEAAI 241
Query: 384 RFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATE 419
P VS L+ GLL P +R ++ T+
Sbjct: 242 HPPYL--VSKELMSLVSGLLQPVPERRTTLEKLVTD 275
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 8/153 (5%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL-LRAQTEREILGLLDHP 154
+ L + LG+G + V+L + A+KV+ +A LA LR + E + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 155 FLPTLYSYFETDK----FYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
+ +Y E + +VME+ G L + + T A ++ AL
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALN 130
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ H GI++RD+KP N+L+ + + DF ++
Sbjct: 131 FSHQNGIIHRDVKPANILISATNAVKVVDFGIA 163
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 277 VHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTN--VRSMSFVGTHEYLA 334
+H ++P+ IL S N DFG + +A+ N ++ + +GT +YL+
Sbjct: 138 IHRDVKPAN----ILISATNAVKVVDFG------IARAIADSGNSVXQTAAVIGTAQYLS 187
Query: 335 PEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKG 368
PE RG+ + D ++ G LYE+L G PF G
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 77/147 (52%), Gaps = 11/147 (7%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKAS-LASRNKLLRAQTEREILGLLDHPFLPTLY 160
LG G +V+ + T FA+KV + S L + +R E E+L L+H + L+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR---EFEVLKKLNHKNIVKLF 73
Query: 161 SYFE--TDKFYCLVMEFCSGGNLHSLRQKQPNKY-FTEDAARFFASEVLLALEYLHMLGI 217
+ E T + L+MEFC G+L+++ ++ N Y E +V+ + +L GI
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 218 VYRDLKPENVL--VRDEGHIM--LSDF 240
V+R++KP N++ + ++G + L+DF
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDF 160
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 88 GPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
G + + +LL+ +G G+ G V L + RG A+K + + A E +
Sbjct: 15 GWALNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATAQA-----FLAEASV 67
Query: 148 LGLLDHPFLPTLYSYFETDK--FYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEV 205
+ L H L L +K Y +V E+ + G+L + + D F+ +V
Sbjct: 68 MTQLRHSNLVQLLGVIVEEKGGLY-IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 126
Query: 206 LLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
A+EYL V+RDL NVLV ++ +SDF L+ S
Sbjct: 127 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 11/78 (14%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
+L S+ N SDFG L E ++ + + ++ APE +R + + D
Sbjct: 148 VLVSEDNVAKVSDFG---------LTKEASSTQDTGKLPV-KWTAPEALREKKFSTKSDV 197
Query: 350 WTFGIFLYELLH-GTTPF 366
W+FGI L+E+ G P+
Sbjct: 198 WSFGILLWEIYSFGRVPY 215
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 4/147 (2%)
Query: 99 LKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGLLDHPFL 156
L LG G +VY + TN A+K + + + REI L L HP +
Sbjct: 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNI 74
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLG 216
L F LV +F +L + K + T + + L LEYLH
Sbjct: 75 IGLLDAFGHKSNISLVFDFMET-DLEVI-IKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW 132
Query: 217 IVYRDLKPENVLVRDEGHIMLSDFDLS 243
I++RDLKP N+L+ + G + L+DF L+
Sbjct: 133 ILHRDLKPNNLLLDENGVLKLADFGLA 159
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASR-NKLLRAQTEREILG 149
I + + +++G G G+V+ E G++ + +M++ A R N+ LR E I+
Sbjct: 34 IPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKI-LMEQDFHAERVNEFLR---EVAIMK 89
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF-FASEVLLA 208
L HP + +V E+ S G+L+ L K + ++ R A +V
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 149
Query: 209 LEYLHMLG--IVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YLH IV+RDLK N+LV + + + DF LS
Sbjct: 150 MNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLS 186
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 27/158 (17%)
Query: 288 PRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAV 347
P +L KK DFG L L A + S GT E++APE++R E
Sbjct: 168 PNLLVDKKYTVKVCDFG------LSRLKAS-XFLXSKXAAGTPEWMAPEVLRDEPSNEKS 220
Query: 348 DWWTFGIFLYELLHGTTPFKGQGNRATLFNVVG---QPLRFPE--TPQVSFVARDLIRGL 402
D ++FG+ L+EL P+ G N A + VG + L P PQV+ + I G
Sbjct: 221 DVYSFGVILWELATLQQPW-GNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAI----IEGC 275
Query: 403 LVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPP 440
EP KR ++ ++ L++SA+PP
Sbjct: 276 WTNEPWKRPSFATIMDLLR----------PLIKSAVPP 303
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L + L+K+LG G G V+ R T A+K K A +N +T REI+ L +
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVK---KIFDAFQNSTDAQRTFREIMILTE 64
Query: 153 ---HPFLPTLYSYF--ETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
H + L + + D+ LV ++ +LH++ + ++ +++
Sbjct: 65 LSGHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRAN---ILEPVHKQYVVYQLIK 120
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++YLH G+++RD+KP N+L+ E H+ ++DF LS
Sbjct: 121 VIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLS 156
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 326 FVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
+V T Y APEI+ G + +D W+ G L E+L G F G L ++G +
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG-VID 248
Query: 385 FPETPQVSFV----ARDLIRGL 402
FP V + A+ +I L
Sbjct: 249 FPSNEDVESIQSPFAKTMIESL 270
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 128/346 (36%), Gaps = 95/346 (27%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKA--SLASRNKLLRAQTEREILGLLD 152
N+ + +G G G VYL + N A+K +++ L ++LR T IL L
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREIT---ILNRLK 85
Query: 153 HPFLPTLYSY------FETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVL 206
++ L+ + D+ Y +V+E + +L L K P + TE + +L
Sbjct: 86 SDYIIRLHDLIIPEDLLKFDELY-IVLEI-ADSDLKKLF-KTP-IFLTEQHVKTILYNLL 141
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXX 266
L +++H GI++RDLKP N L+ + + + DF L+ + +
Sbjct: 142 LGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDI-------------- 187
Query: 267 XXXILNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSF 326
I+ND +P P KN K + S
Sbjct: 188 --HIVNDLEEKEENEEPG-------PHNKNLKK----------------------QLTSH 216
Query: 327 VGTHEYLAPE-IIRGEGHGSAVDWWTFGIFLYELL------------------------- 360
V T Y APE I+ E + +++D W+ G ELL
Sbjct: 217 VVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFPL 276
Query: 361 ---HGTTPFKGQGNRATL---FNVVGQPLRFPETPQVSFVARDLIR 400
H + + NR L FNV+G P PE +++I+
Sbjct: 277 SPDHNSKKVHEKSNRDQLNIIFNVIGTP---PEEDLKCITKQEVIK 319
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 8/153 (5%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL-LRAQTEREILGLLDHP 154
+ L + LG+G + V+L + A+KV+ +A LA LR + E + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 155 FLPTLYSYFETDK----FYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
+ +Y+ E + +VME+ G L + + T A ++ AL
Sbjct: 73 AIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALN 130
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ H GI++RD+KP N+++ + + DF ++
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 277 VHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTN--VRSMSFVGTHEYLA 334
+H ++P+ I+ S N DFG + +A+ N ++ + +GT +YL+
Sbjct: 138 IHRDVKPAN----IMISATNAVKVMDFG------IARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 335 PEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKG 368
PE RG+ + D ++ G LYE+L G PF G
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 20/133 (15%)
Query: 309 GALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHG-----------SAVDWWTFGIFLY 357
G ++ + T+V S VGT Y+ PE I+ D W+ G LY
Sbjct: 199 GIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 258
Query: 358 ELLHGTTPFKGQGNRATLFNVVGQP---LRFPETPQVSFVARDLIRGLLVKEPHKRIAYK 414
+ +G TPF+ N+ + + + P + FP+ P+ +D+++ L ++P +RI+
Sbjct: 259 YMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQRIS-- 314
Query: 415 RGATEIKQHPFFE 427
E+ HP+ +
Sbjct: 315 --IPELLAHPYVQ 325
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH-- 153
+ +LK++G G V+ V L +A+K ++ A L + E L L
Sbjct: 58 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 115
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
+ LY Y TD++ +VME C +L+S +K+ K + + +L A+ +H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 172
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
GIV+ DLKP N L+ D G + L DF ++
Sbjct: 173 QHGIVHSDLKPANFLIVD-GMLKLIDFGIA 201
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 9/155 (5%)
Query: 99 LKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
L +LG G +VY + + T+ A+K + A E +L L H + T
Sbjct: 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEH--EEGAPCTAIREVSLLKDLKHANIVT 64
Query: 159 LYSYFETDKFYCLVMEFCSGGNLHSLRQ--KQPNKYFTEDAARFFASEVLLALEYLHMLG 216
L+ T+K LV E+ L+Q + F ++L L Y H
Sbjct: 65 LHDIIHTEKSLTLVFEYLD----KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 217 IVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPT 251
+++RDLKP+N+L+ + G + L+DF L+ R PT
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLA-RAKSIPT 154
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 59/166 (35%), Gaps = 40/166 (24%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVD 348
+L +++ +DFG ++P + + V T Y P+I+ G + + +D
Sbjct: 131 LLINERGELKLADFGLARAKSIPTKTYD-------NEVVTLWYRPPDILLGSTDYSTQID 183
Query: 349 WWTFGIFLYELLHGTTPFKGQGNRATL---FNVVGQPLR--------------------- 384
W G YE+ G F G L F ++G P
Sbjct: 184 MWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYR 243
Query: 385 ----FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
P++ DL+ LL E RI+ A + +HPFF
Sbjct: 244 AEALLSHAPRLDSDGADLLTKLLQFEGRNRIS----AEDAMKHPFF 285
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 90 PIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRN-----KLLRAQTE 144
P L R + YG + S Y LR + ++ + +R +LL+
Sbjct: 27 PQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKH 86
Query: 145 REILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASE 204
++GLLD F P S + + Y + G +L+++ + Q +++ +F +
Sbjct: 87 ENVIGLLD-VFTPAT-SIEDFSEVYLVTT--LMGADLNNIVKSQA---LSDEHVQFLVYQ 139
Query: 205 VLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+L L+Y+H GI++RDLKP NV V ++ + + DF L+
Sbjct: 140 LLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQ---G 370
+A + +V T Y APEI+ H VD W+ G + ELL G F G
Sbjct: 177 LARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYID 236
Query: 371 NRATLFNVVGQP 382
+ VVG P
Sbjct: 237 QLKRIMEVVGTP 248
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 20/160 (12%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDK-------ASLASRNKLLRAQTERE-ILGLLDH 153
+G G GSV + + A+K + + A A R LL + E ++GLLD
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD- 108
Query: 154 PFLP--TLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
F P +L ++++ FY LVM F + + QK F+E+ ++ ++L L+Y
Sbjct: 109 VFTPASSLRNFYD---FY-LVMPF-----MQTDLQKIMGMEFSEEKIQYLVYQMLKGLKY 159
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPT 251
+H G+V+RDLKP N+ V ++ + + DF L+ T
Sbjct: 160 IHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT 199
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 55/143 (38%), Gaps = 34/143 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQ---G 370
+A + +V T Y APE+I H VD W+ G + E+L G T FKG+
Sbjct: 190 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 249
Query: 371 NRATLFNVVGQP-----------------LRFPETPQVSFV---------ARDLIRGLLV 404
+ V G P P+TP+ F A DL+ +L
Sbjct: 250 QLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE 309
Query: 405 KEPHKRIAYKRGATEIKQHPFFE 427
+ KR+ + T HPFFE
Sbjct: 310 LDVDKRLTAAQALT----HPFFE 328
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 20/133 (15%)
Query: 309 GALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHG-----------SAVDWWTFGIFLY 357
G ++ + T+V S VGT Y+ PE I+ D W+ G LY
Sbjct: 155 GIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 214
Query: 358 ELLHGTTPFKGQGNRATLFNVVGQP---LRFPETPQVSFVARDLIRGLLVKEPHKRIAYK 414
+ +G TPF+ N+ + + + P + FP+ P+ +D+++ L ++P +RI+
Sbjct: 215 YMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQRIS-- 270
Query: 415 RGATEIKQHPFFE 427
E+ HP+ +
Sbjct: 271 --IPELLAHPYVQ 281
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH-- 153
+ +LK++G G V+ V L +A+K ++ A L + E L L
Sbjct: 14 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 71
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
+ LY Y TD++ +VME C +L+S +K+ K + + +L A+ +H
Sbjct: 72 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 128
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
GIV+ DLKP N L+ D G + L DF ++
Sbjct: 129 QHGIVHSDLKPANFLIVD-GMLKLIDFGIA 157
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 8/153 (5%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL-LRAQTEREILGLLDHP 154
+ L + LG+G + V+L + A+KV+ +A LA LR + E + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 155 FLPTLYSYFETDK----FYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
+ +Y E + +VME+ G L + + T A ++ AL
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALN 130
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ H GI++RD+KP N+++ + + DF ++
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 277 VHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTN--VRSMSFVGTHEYLA 334
+H ++P+ I+ S N DFG + +A+ N ++ + +GT +YL+
Sbjct: 138 IHRDVKPAN----IMISATNAVKVMDFG------IARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 335 PEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKG 368
PE RG+ + D ++ G LYE+L G PF G
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 8/153 (5%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL-LRAQTEREILGLLDHP 154
+ L + LG+G + V+L + A+KV+ +A LA LR + E + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 155 FLPTLYSYFETDK----FYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
+ +Y E + +VME+ G L + + T A ++ AL
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALN 130
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ H GI++RD+KP N+++ + + DF ++
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 277 VHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTN--VRSMSFVGTHEYLA 334
+H ++P+ I+ S N DFG + +A+ N ++ + +GT +YL+
Sbjct: 138 IHRDVKPAN----IMISATNAVKVMDFG------IARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 335 PEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKG 368
PE RG+ + D ++ G LYE+L G PF G
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
NFR+ K++G G+ G + L + TN Y A+K+ + SR L + R L
Sbjct: 5 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL---EPIKSRAPQLHLEY-RFYKQLSATE 60
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+P +Y + K+ +V+E G +L L ++ FT A +++ +EY+H
Sbjct: 61 GVPQVYYFGPXGKYNAMVLELL-GPSLEDLFD-LCDRTFTLKTVLMIAIQLITRMEYVHT 118
Query: 215 LGIVYRDLKPENVLV-----RDEGHIMLSDFDLS 243
++YRD+KPEN LV + + I + DF L+
Sbjct: 119 KSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLA 152
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 20/133 (15%)
Query: 309 GALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHG-----------SAVDWWTFGIFLY 357
G ++ + T+V S VGT Y+ PE I+ D W+ G LY
Sbjct: 199 GIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 258
Query: 358 ELLHGTTPFKGQGNRATLFNVVGQP---LRFPETPQVSFVARDLIRGLLVKEPHKRIAYK 414
+ +G TPF+ N+ + + + P + FP+ P+ +D+++ L ++P +RI+
Sbjct: 259 YMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQRIS-- 314
Query: 415 RGATEIKQHPFFE 427
E+ HP+ +
Sbjct: 315 --IPELLAHPYVQ 325
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH-- 153
+ +LK++G G V+ V L +A+K ++ A L + E L L
Sbjct: 58 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 115
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
+ LY Y TD++ +VME C +L+S +K+ K + + +L A+ +H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 172
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
GIV+ DLKP N L+ D G + L DF ++
Sbjct: 173 QHGIVHSDLKPANFLIVD-GMLKLIDFGIA 201
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 20/133 (15%)
Query: 309 GALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHG-----------SAVDWWTFGIFLY 357
G ++ + T+V S VGT Y+ PE I+ D W+ G LY
Sbjct: 171 GIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 230
Query: 358 ELLHGTTPFKGQGNRATLFNVVGQP---LRFPETPQVSFVARDLIRGLLVKEPHKRIAYK 414
+ +G TPF+ N+ + + + P + FP+ P+ +D+++ L ++P +RI+
Sbjct: 231 YMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQRIS-- 286
Query: 415 RGATEIKQHPFFE 427
E+ HP+ +
Sbjct: 287 --IPELLAHPYVQ 297
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH-- 153
+ +LK++G G V+ V L +A+K ++ A L + E L L
Sbjct: 30 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 87
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
+ LY Y TD++ +VME C +L+S +K+ K + + +L A+ +H
Sbjct: 88 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 144
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
GIV+ DLKP N L+ D G + L DF ++
Sbjct: 145 QHGIVHSDLKPANFLIVD-GMLKLIDFGIA 173
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 20/133 (15%)
Query: 309 GALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHG-----------SAVDWWTFGIFLY 357
G ++ + T+V S VGT Y+ PE I+ D W+ G LY
Sbjct: 152 GIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 211
Query: 358 ELLHGTTPFKGQGNRATLFNVVGQP---LRFPETPQVSFVARDLIRGLLVKEPHKRIAYK 414
+ +G TPF+ N+ + + + P + FP+ P+ +D+++ L ++P +RI+
Sbjct: 212 YMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQRIS-- 267
Query: 415 RGATEIKQHPFFE 427
E+ HP+ +
Sbjct: 268 --IPELLAHPYVQ 278
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH-- 153
+ +LK++G G V+ V L +A+K ++ A L + E L L
Sbjct: 11 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 68
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
+ LY Y TD++ +VME C +L+S +K+ K + + +L A+ +H
Sbjct: 69 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 125
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
GIV+ DLKP N L+ D G + L DF ++
Sbjct: 126 QHGIVHSDLKPANFLIVD-GMLKLIDFGIA 154
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 4/160 (2%)
Query: 84 ISLRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQT 143
+SL + ++ + +LG G G VY + + A+K + + ++ L A
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 60
Query: 144 EREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFAS 203
+EI HP L L + + ++ EF + GNL ++ + + + A+
Sbjct: 61 MKEI----KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 116
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++ A+EYL ++RDL N LV + + ++DF LS
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 156
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 20/133 (15%)
Query: 309 GALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHG-----------SAVDWWTFGIFLY 357
G ++ + T+V S VGT Y+ PE I+ D W+ G LY
Sbjct: 151 GIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 210
Query: 358 ELLHGTTPFKGQGNRATLFNVVGQP---LRFPETPQVSFVARDLIRGLLVKEPHKRIAYK 414
+ +G TPF+ N+ + + + P + FP+ P+ +D+++ L ++P +RI+
Sbjct: 211 YMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQRIS-- 266
Query: 415 RGATEIKQHPFFE 427
E+ HP+ +
Sbjct: 267 --IPELLAHPYVQ 277
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH-- 153
+ +LK++G G V+ V L +A+K ++ A L + E L L
Sbjct: 10 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 67
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
+ LY Y TD++ +VME C +L+S +K+ K + + +L A+ +H
Sbjct: 68 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 124
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
GIV+ DLKP N L+ D G + L DF ++
Sbjct: 125 QHGIVHSDLKPANFLIVD-GMLKLIDFGIA 153
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++ + +LG G G VY + + A+K + + ++ L A +EI H
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KH 66
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L L + + +++EF + GNL ++ + + + A+++ A+EYL
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV + + ++DF LS
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLS 156
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 8/153 (5%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL-LRAQTEREILGLLDHP 154
+ L + LG+G + V+L + A+KV+ +A LA LR + E + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 155 FLPTLYSYFETDK----FYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
+ +Y E + +VME+ G L + + T A ++ AL
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALN 130
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ H GI++RD+KP N+++ + + DF ++
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 277 VHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTN--VRSMSFVGTHEYLA 334
+H ++P+ I+ S N DFG + +A+ N ++ + +GT +YL+
Sbjct: 138 IHRDVKPAN----IMISATNAVKVMDFG------IARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 335 PEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKG 368
PE RG+ + D ++ G LYE+L G PF G
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 20/160 (12%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDK-------ASLASRNKLLRAQTERE-ILGLLDH 153
+G G GSV + + A+K + + A A R LL + E ++GLLD
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD- 90
Query: 154 PFLP--TLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
F P +L ++++ FY LVM F + + QK F+E+ ++ ++L L+Y
Sbjct: 91 VFTPASSLRNFYD---FY-LVMPF-----MQTDLQKIMGLKFSEEKIQYLVYQMLKGLKY 141
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPT 251
+H G+V+RDLKP N+ V ++ + + DF L+ T
Sbjct: 142 IHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT 181
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 55/143 (38%), Gaps = 34/143 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQ---G 370
+A + +V T Y APE+I H VD W+ G + E+L G T FKG+
Sbjct: 172 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 231
Query: 371 NRATLFNVVGQP-----------------LRFPETPQVSFV---------ARDLIRGLLV 404
+ V G P P+TP+ F A DL+ +L
Sbjct: 232 QLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE 291
Query: 405 KEPHKRIAYKRGATEIKQHPFFE 427
+ KR+ + T HPFFE
Sbjct: 292 LDVDKRLTAAQALT----HPFFE 310
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++ + +LG G G VY + + A+K + + ++ L A +EI H
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KH 68
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L L + + +++EF + GNL ++ + + + A+++ A+EYL
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV + + ++DF LS
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 4/172 (2%)
Query: 72 TGGDVRWDAINMISLRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKAS 131
+G D+ + + S+ + ++ + +LG G G VY+ + + A+K + + +
Sbjct: 10 SGVDLGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDT 69
Query: 132 LASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNK 191
+ L A +EI HP L L + + +V E+ GNL ++ +
Sbjct: 70 MEVEEFLKEAAVMKEI----KHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNRE 125
Query: 192 YFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
T + A+++ A+EYL ++RDL N LV + + ++DF LS
Sbjct: 126 EVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLS 177
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 15/157 (9%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVM---DKASLASRNKLLRAQTEREILGL 150
S+F+L LG G G V + T A+K + DK A LR E +IL
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA-----LRTLREIKILKH 65
Query: 151 LDHPFLPTLYSYFETDKFY----CLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVL 206
H + T+++ D F +++ +LH + Q ++D ++F + L
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTL 122
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
A++ LH +++RDLKP N+L+ + + DF L+
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 37/145 (25%)
Query: 316 AEPTNVRS--MSFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNR 372
+EPT +S V T Y APE+ + + A+D W+ G L EL F G+ R
Sbjct: 170 SEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 373 ATL---FNVVGQP-----LRFPETPQVSFVAR----------------------DLIRGL 402
L F ++G P LR E+P+ + DL++ +
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 403 LVKEPHKRIAYKRGATEIKQHPFFE 427
LV +P KRI A E +HP+ +
Sbjct: 290 LVFDPAKRIT----AKEALEHPYLQ 310
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 90 PIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRN-----KLLRAQTE 144
P L R + YG + S Y LR + ++ + +R +LL+
Sbjct: 27 PQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKH 86
Query: 145 REILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASE 204
++GLLD F P S + + Y + G +L+++ + Q +++ +F +
Sbjct: 87 ENVIGLLD-VFTPAT-SIEDFSEVYLVTT--LMGADLNNIVKCQA---LSDEHVQFLVYQ 139
Query: 205 VLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+L L+Y+H GI++RDLKP NV V ++ + + DF L+
Sbjct: 140 LLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQ---G 370
+A + +V T Y APEI+ H VD W+ G + ELL G F G
Sbjct: 177 LARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYID 236
Query: 371 NRATLFNVVGQP 382
+ VVG P
Sbjct: 237 QLKRIMEVVGTP 248
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 11/170 (6%)
Query: 79 DAINMISLRGPPIGLSNFRLLKRLGYGDIGSVYL-VELRGTNTYFAMKVMDKASLASRNK 137
D M S R I L + +G G G V+ + + N AM V K +
Sbjct: 375 DTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENP--AMAVAIKTCKNCTSD 432
Query: 138 LLRAQTEREILGL--LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE 195
+R + +E L + DHP + L + + ++ME C+ G L S Q + F+
Sbjct: 433 SVREKFLQEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQV---RKFSL 488
Query: 196 DAARF--FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
D A +A ++ AL YL V+RD+ NVLV + L DF LS
Sbjct: 489 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 538
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYE-LLHGTTPFKGQGNRATLFNVVGQ 381
+++APE I SA D W FG+ ++E L+HG PF+G N +V+G+
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 604
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 4/160 (2%)
Query: 84 ISLRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQT 143
+SL + ++ + +LG G G VY + + A+K + + ++ L A
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAV 60
Query: 144 EREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFAS 203
+EI HP L L + + ++ EF + GNL ++ + + + A+
Sbjct: 61 MKEI----KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 116
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++ A+EYL ++RDL N LV + + ++DF LS
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 156
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 15/157 (9%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVM---DKASLASRNKLLRAQTEREILGL 150
S+F+L LG G G V + T A+K + DK A LR E +IL
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA-----LRTLREIKILKH 65
Query: 151 LDHPFLPTLYSYFETDKFY----CLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVL 206
H + T+++ D F +++ +LH + Q ++D ++F + L
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTL 122
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
A++ LH +++RDLKP N+L+ + + DF L+
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 37/145 (25%)
Query: 316 AEPTNVRS--MSFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNR 372
+EPT +S + FV T Y APE+ + + A+D W+ G L EL F G+ R
Sbjct: 170 SEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 373 ATL---FNVVGQP-----LRFPETPQVSFVAR----------------------DLIRGL 402
L F ++G P LR E+P+ + DL++ +
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 403 LVKEPHKRIAYKRGATEIKQHPFFE 427
LV +P KRI A E +HP+ +
Sbjct: 290 LVFDPAKRIT----AKEALEHPYLQ 310
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ + +LL+ +G G+ G V L + RG A+K + + A E ++
Sbjct: 3 LNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATAQA-----FLAEASVMTQ 55
Query: 151 LDHPFLPTLYSYFETDK--FYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLA 208
L H L L +K Y +V E+ + G+L + + D F+ +V A
Sbjct: 56 LRHSNLVQLLGVIVEEKGGLY-IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 114
Query: 209 LEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
+EYL V+RDL NVLV ++ +SDF L+ S
Sbjct: 115 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 153
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 11/78 (14%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
+L S+ N SDFG L E ++ + + ++ APE +R + + D
Sbjct: 133 VLVSEDNVAKVSDFG---------LTKEASSTQDTGKLPV-KWTAPEALREKKFSTKSDV 182
Query: 350 WTFGIFLYELLH-GTTPF 366
W+FGI L+E+ G P+
Sbjct: 183 WSFGILLWEIYSFGRVPY 200
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 19/158 (12%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDK-------ASLASRN-KLLRAQTEREI 147
+R L+ +G G G+V T A+K + + A A R +LL+ +
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 148 LGLLDHPFLP--TLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEV 205
+GLLD F P TL + TD FY LVM F G +L L + + ED +F ++
Sbjct: 87 IGLLD-VFTPDETLDDF--TD-FY-LVMPFM-GTDLGKLMKHEK---LGEDRIQFLVYQM 137
Query: 206 LLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
L L Y+H GI++RDLKP N+ V ++ + + DF L+
Sbjct: 138 LKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA 175
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 56/146 (38%), Gaps = 34/146 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEII-RGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A + V T Y APE+I + VD W+ G + E++ G T FKG +
Sbjct: 174 LARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD 233
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L V G P PE + F +A +L+ +LV
Sbjct: 234 QLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLV 293
Query: 405 KEPHKRIAYKRGATEIKQHPFFEGVN 430
+ +R+ A E HP+FE ++
Sbjct: 294 LDAEQRVT----AGEALAHPYFESLH 315
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 15/157 (9%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVM---DKASLASRNKLLRAQTEREILGL 150
S+F+L LG G G V + T A+K + DK A LR E +IL
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA-----LRTLREIKILKH 65
Query: 151 LDHPFLPTLYSYFETDKFY----CLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVL 206
H + T+++ D F +++ +LH + Q ++D ++F + L
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTL 122
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
A++ LH +++RDLKP N+L+ + + DF L+
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 37/145 (25%)
Query: 316 AEPTNVRS--MSFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNR 372
+EPT +S +V T Y APE+ + + A+D W+ G L EL F G+ R
Sbjct: 170 SEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 373 ATL---FNVVGQP-----LRFPETPQVSFVAR----------------------DLIRGL 402
L F ++G P LR E+P+ + DL++ +
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 403 LVKEPHKRIAYKRGATEIKQHPFFE 427
LV +P KRI A E +HP+ +
Sbjct: 290 LVFDPAKRIT----AKEALEHPYLQ 310
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++ + +LG G G VY + + A+K + + ++ L A +EI H
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KH 68
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L L + + +++EF + GNL ++ + + + A+++ A+EYL
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV + + ++DF LS
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL-- 151
+ +RL LG G G+V+ A+KV+ + + + L + T + LL
Sbjct: 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWK 90
Query: 152 -----DHPFLPTLYSYFETDKFYCLVME--FCSGGNLHSLRQKQPNKYFTEDAARFFASE 204
HP + L +FET + + LV+E + + +K P E +R F +
Sbjct: 91 VGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP---LGEGPSRCFFGQ 147
Query: 205 VLLALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
V+ A+++ H G+V+RD+K EN+L+ G L DF
Sbjct: 148 VVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDF 184
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Query: 326 FVGTHEYLAPEII-RGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
F GT Y PE I R + H W+ GI LY+++ G PF+ ++ L
Sbjct: 198 FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAELH 251
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKR 410
FP VS LIR L +P R
Sbjct: 252 FPA--HVSPDCCALIRRCLAPKPSSR 275
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 4/150 (2%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++ + +LG G G VY + + A+K + + ++ L A +EI H
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KH 69
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L L + + +++EF + GNL ++ + + A+++ A+EYL
Sbjct: 70 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV + + ++DF LS
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLS 159
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 73 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKSQK---LTDD 125
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL 242
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGL 171
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 58/155 (37%), Gaps = 44/155 (28%)
Query: 302 DFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELL 360
DFG C T+ +V T Y APEI+ H VD W+ G + ELL
Sbjct: 168 DFGLC----------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 361 HGTTPFKGQGNRATL---FNVVGQP-----------------LRFPETPQVSF------- 393
G T F G + L +VG P + P+++F
Sbjct: 218 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA 277
Query: 394 --VARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
+A DL+ +LV + KRI A + H +F
Sbjct: 278 NPLAVDLLEKMLVLDSDKRIT----AAQALAHAYF 308
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 18/177 (10%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--- 147
+ S + + +G G G+VY + + A+K + + + L T RE+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK---SVRVPNGEEGLPISTVREVALL 57
Query: 148 --LGLLDHPFLPTLYSYFETDKF-----YCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF 200
L +HP + L T + LV E +L + K P + +
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKD 116
Query: 201 FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL----SLRCSVSPTLV 253
+ L L++LH IV+RDLKPEN+LV G + L+DF L S + +++P +V
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV 173
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 25/115 (21%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVGQPL 383
V T Y APE++ + + VD W+ G E+ F G L F+++G P
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 231
Query: 384 R-------------FPE---------TPQVSFVARDLIRGLLVKEPHKRIAYKRG 416
FP P++ L+ +L PHKRI+ R
Sbjct: 232 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRA 286
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 8/153 (5%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL-LRAQTEREILGLLDHP 154
+ L + LG+G + V+L + A+KV+ +A LA LR + E + L+HP
Sbjct: 31 YELGEILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 89
Query: 155 FLPTLYSYFETDK----FYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
+ +Y E + +VME+ G L + + T A ++ AL
Sbjct: 90 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALN 147
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ H GI++RD+KP N+++ + + DF ++
Sbjct: 148 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIA 180
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 277 VHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTN--VRSMSFVGTHEYLA 334
+H ++P+ I+ S N DFG + +A+ N ++ + +GT +YL+
Sbjct: 155 IHRDVKPAN----IMISATNAVKVMDFG------IARAIADSGNSVTQTAAVIGTAQYLS 204
Query: 335 PEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKG 368
PE RG+ + D ++ G LYE+L G PF G
Sbjct: 205 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 238
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 4/150 (2%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++ + +LG G G VY + + A+K + + ++ L A +EI H
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KH 73
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L L + + +++EF + GNL ++ + + A+++ A+EYL
Sbjct: 74 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV + + ++DF LS
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y + G +L+++ + Q T+D
Sbjct: 73 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVYLVT--HLMGADLNNIVKXQK---LTDD 125
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 172
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 291 LDSDKRIT----AAQALAHAYF 308
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 4/150 (2%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++ + +LG G G VY + + A+K + + ++ L A +EI H
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KH 73
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L L + + ++ EF + GNL ++ + + + A+++ A+EYL
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 133
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV + + ++DF LS
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 75 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 127
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 128 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA 174
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 233 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 292
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 293 LDSDKRIT----AAQALAHAYF 310
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 3/145 (2%)
Query: 96 FRLLKRLGYG--DIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+ LL +G G D+ +V L + T Y ++ ++ + S + Q E + L +H
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA-CSNEMVTFLQGELHVSKLFNH 69
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P + + F D +V F + G+ L E A + VL AL+Y+H
Sbjct: 70 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 129
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLS 238
+G V+R +K ++L+ +G + LS
Sbjct: 130 HMGYVHRSVKASHILISVDGKVYLS 154
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 90 PIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRN-----KLLRAQTE 144
P L R + YG + S Y LR + ++ + +R +LL+
Sbjct: 19 PQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKH 78
Query: 145 REILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASE 204
++GLLD F P S + + Y + G +L+++ + Q +++ +F +
Sbjct: 79 ENVIGLLD-VFTPAT-SIEDFSEVYLVTT--LMGADLNNIVKCQA---LSDEHVQFLVYQ 131
Query: 205 VLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+L L+Y+H GI++RDLKP NV V ++ + + DF L+
Sbjct: 132 LLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLA 170
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQ---G 370
+A + +V T Y APEI+ H VD W+ G + ELL G F G
Sbjct: 169 LARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYID 228
Query: 371 NRATLFNVVGQP 382
+ VVG P
Sbjct: 229 QLKRIMEVVGTP 240
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+L++RLG G G V++ G +T A+K + + S++ L E ++ L H
Sbjct: 21 ETLKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQH 75
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y ++ E+ G+L + T + A+++ + ++
Sbjct: 76 QRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 134
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL+ N+LV D ++DF L+
Sbjct: 135 ERNYIHRDLRAANILVSDTLSCKIADFGLA 164
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNV 378
++ APE I D W+FGI L E++ HG P+ G N + N+
Sbjct: 183 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 231
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 4/150 (2%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++ + +LG G G VY + + A+K + + ++ L A +EI H
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KH 68
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L L + + ++ EF + GNL ++ + + + A+++ A+EYL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV + + ++DF LS
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 73 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKXQK---LTDD 125
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 291 LDSDKRIT----AAQALAHAYF 308
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 79 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 131
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 132 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA 178
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 237 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 296
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 297 LDSDKRIT----AAQALAHAYF 314
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPF---KGQG-----NRATLFNVVGQPL 383
Y+APE++ E + + D W+ G+ +Y LL G PF GQ R G P
Sbjct: 195 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFP- 253
Query: 384 RFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPH 441
PE +VS A+ LIR LL +P +R+ T+ HP+ +N ++V P H
Sbjct: 254 -NPEWSEVSEDAKQLIRLLLKTDPTERLT----ITQFMNHPW---INQSMVVPQTPLH 303
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 171 LVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLV- 229
++ME GG L S Q++ ++ FTE A ++ A+++LH I +RD+KPEN+L
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 162
Query: 230 --RDEGHIMLSDF 240
+ + L+DF
Sbjct: 163 SKEKDAVLKLTDF 175
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+L++RLG G G V++ G +T A+K + + S++ L A ++ L H
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQH 73
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y ++ E+ G+L + T + A+++ + ++
Sbjct: 74 QRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL+ N+LV D ++DF L+
Sbjct: 133 ERNYIHRDLRAANILVSDTLSCKIADFGLA 162
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNV 378
++ APE I D W+FGI L E++ HG P+ G N + N+
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+L++RLG G G V++ G +T A+K + + S++ L E ++ L H
Sbjct: 23 ETLKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQH 77
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y ++ E+ G+L + T + A+++ + ++
Sbjct: 78 QRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 136
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL+ N+LV D ++DF L+
Sbjct: 137 ERNYIHRDLRAANILVSDTLSCKIADFGLA 166
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNV 378
++ APE I D W+FGI L E++ HG P+ G N + N+
Sbjct: 185 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 233
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 17/133 (12%)
Query: 123 AMKVMDKASLASRN---KLLRAQTEREI-------LGLLDHPFLPTLYSYFETDKFYCLV 172
A V+ KA +++ K + +++ER+ L ++HP + LY CLV
Sbjct: 21 AFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLV 78
Query: 173 MEFCSGGNLHS-LRQKQPNKYFTEDAARFFASEVLLALEYLHML---GIVYRDLKPENVL 228
ME+ GG+L++ L +P Y+T A + + + YLH + +++RDLKP N+L
Sbjct: 79 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL 138
Query: 229 VRDEGHIM-LSDF 240
+ G ++ + DF
Sbjct: 139 LVAGGTVLKICDF 151
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
G+ ++APE+ G + D +++GI L+E++ PF G A
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA 211
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+L++RLG G G V++ G +T A+K + + S++ L E ++ L H
Sbjct: 22 ETLKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQH 76
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y ++ E+ G+L + T + A+++ + ++
Sbjct: 77 QRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 135
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL+ N+LV D ++DF L+
Sbjct: 136 ERNYIHRDLRAANILVSDTLSCKIADFGLA 165
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNV 378
++ APE I D W+FGI L E++ HG P+ G N + N+
Sbjct: 184 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 232
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 11/170 (6%)
Query: 79 DAINMISLRGPPIGLSNFRLLKRLGYGDIGSVYL-VELRGTNTYFAMKVMDKASLASRNK 137
D M S R I L + +G G G V+ + + N AM V K +
Sbjct: 375 DTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENP--AMAVAIKTCKNCTSD 432
Query: 138 LLRAQTEREILGL--LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTE 195
+R + +E L + DHP + L + + ++ME C+ G L S Q + F+
Sbjct: 433 SVREKFLQEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQV---RKFSL 488
Query: 196 DAARF--FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
D A +A ++ AL YL V+RD+ NVLV + L DF LS
Sbjct: 489 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS 538
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYE-LLHGTTPFKGQGNRATLFNVVGQ 381
+++APE I SA D W FG+ ++E L+HG PF+G N +V+G+
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGR 604
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 93 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 145
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 146 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 55/142 (38%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 191 LARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 250
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 251 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 310
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 311 LDSDKRIT----AAQALAHAYF 328
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 102 RLLKHMKHENVIGLLD-VFTPAT-SLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 154
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 155 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 201
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 56/146 (38%), Gaps = 42/146 (28%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 200 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDH-- 257
Query: 374 TLFNVVGQPLRFPETPQVSFVAR---------------------------------DLIR 400
N + Q +R TP S ++R DL+
Sbjct: 258 --INQLQQIMRLTGTPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLE 315
Query: 401 GLLVKEPHKRIAYKRGATEIKQHPFF 426
+LV + KRI A+E HP+F
Sbjct: 316 KMLVLDTDKRIT----ASEALAHPYF 337
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPF---KGQG-----NRATLFNVVGQPL 383
Y+APE++ E + + D W+ G+ +Y LL G PF GQ R G P
Sbjct: 176 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFP- 234
Query: 384 RFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPH 441
PE +VS A+ LIR LL +P +R+ T+ HP+ +N ++V P H
Sbjct: 235 -NPEWSEVSEDAKQLIRLLLKTDPTERLT----ITQFMNHPW---INQSMVVPQTPLH 284
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 171 LVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLV- 229
++ME GG L S Q++ ++ FTE A ++ A+++LH I +RD+KPEN+L
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 143
Query: 230 --RDEGHIMLSDF 240
+ + L+DF
Sbjct: 144 SKEKDAVLKLTDF 156
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 3/145 (2%)
Query: 96 FRLLKRLGYG--DIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+ LL +G G D+ +V L + T Y ++ ++ + S + Q E + L +H
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA-CSNEMVTFLQGELHVSKLFNH 85
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P + + F D +V F + G+ L E A + VL AL+Y+H
Sbjct: 86 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 145
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLS 238
+G V+R +K ++L+ +G + LS
Sbjct: 146 HMGYVHRSVKASHILISVDGKVYLS 170
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 11/154 (7%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
NFR+ K++G G+ G + L + TN Y A+K+ S A + L R L
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL----EYRFYKQLGSGD 65
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+P +Y + K+ +V+E G +L L ++ F+ A +++ +EY+H
Sbjct: 66 GIPQVYYFGPCGKYNAMVLELL-GPSLEDLFD-LCDRTFSLKTVLMIAIQLISRMEYVHS 123
Query: 215 LGIVYRDLKPENVLVRDEGH-----IMLSDFDLS 243
++YRD+KPEN L+ G+ I + DF L+
Sbjct: 124 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 157
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 4/150 (2%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++ + +LG G G VY + + A+K + + ++ L A +EI H
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KH 68
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L L + + ++ EF + GNL ++ + + + A+++ A+EYL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV + + ++DF LS
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 18/177 (10%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--- 147
+ S + + +G G G+VY + + A+K + + + L T RE+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK---SVRVPNGEEGLPISTVREVALL 57
Query: 148 --LGLLDHPFLPTLYSYFETDKF-----YCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF 200
L +HP + L T + LV E +L + K P + +
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKD 116
Query: 201 FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL----SLRCSVSPTLV 253
+ L L++LH IV+RDLKPEN+LV G + L+DF L S + ++ P +V
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV 173
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 25/115 (21%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVGQPL 383
V T Y APE++ + + VD W+ G E+ F G L F+++G P
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 231
Query: 384 R-------------FPE---------TPQVSFVARDLIRGLLVKEPHKRIAYKRG 416
FP P++ L+ +L PHKRI+ R
Sbjct: 232 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRA 286
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 71 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 123
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 124 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 170
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 169 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 228
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 229 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 288
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 289 LDSDKRIT----AAQALAHAYF 306
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 92 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 144
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 145 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 191
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 190 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 249
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 250 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 309
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 310 LDSDKRIT----AAQALAHAYF 327
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 93 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 145
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 146 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 191 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 250
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 251 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 310
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 311 LDSDKRIT----AAQALAHAYF 328
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 79 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 131
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 132 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 237 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 296
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 297 LDSDKRIT----AAQALAHAYF 314
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 69 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 121
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 122 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 286
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 287 LDSDKRIT----AAQALAHAYF 304
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 69 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 121
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 122 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 286
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 287 LDSDKRIT----AAQALAHAYF 304
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 69 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 121
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 122 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ FV T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 167 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 286
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 287 LDSDKRIT----AAQALAHAYF 304
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 85 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 137
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 138 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 242
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 243 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 302
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 303 LDSDKRIT----AAQALAHAYF 320
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++ + +LG G G VY + + A+K + + ++ L A +EI H
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KH 73
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L L + + ++ EF + GNL ++ + + A+++ A+EYL
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV + + ++DF LS
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 70 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 122
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 123 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 169
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 168 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 227
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 228 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 287
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 288 LDSDKRIT----AAQALAHAYF 305
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 79 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 131
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 132 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 237 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 296
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 297 LDSDKRIT----AAQALAHAYF 314
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 17/133 (12%)
Query: 123 AMKVMDKASLASRN---KLLRAQTEREI-------LGLLDHPFLPTLYSYFETDKFYCLV 172
A V+ KA +++ K + +++ER+ L ++HP + LY CLV
Sbjct: 20 AFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLV 77
Query: 173 MEFCSGGNLHS-LRQKQPNKYFTEDAARFFASEVLLALEYLHML---GIVYRDLKPENVL 228
ME+ GG+L++ L +P Y+T A + + + YLH + +++RDLKP N+L
Sbjct: 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL 137
Query: 229 VRDEGHIM-LSDF 240
+ G ++ + DF
Sbjct: 138 LVAGGTVLKICDF 150
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
G+ ++APE+ G + D +++GI L+E++ PF G A
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA 210
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 85 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 137
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 138 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 242
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 243 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 302
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 303 LDSDKRIT----AAQALAHAYF 320
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 6/156 (3%)
Query: 88 GPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
G I S ++ +G G G V+L + A+K + + +++ + + E E+
Sbjct: 1 GSVIDPSELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFI----EEAEV 55
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ L HP L LY CLV EF G L + Q F + +V
Sbjct: 56 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCE 114
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +++RDL N LV + I +SDF ++
Sbjct: 115 GMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMT 150
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 84 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 136
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 137 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 183
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 182 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 241
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 242 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 301
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 302 LDSDKRIT----AAQALAHAYF 319
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++ + +LG G G VY + + A+K + + ++ L A +EI H
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KH 73
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L L + + ++ EF + GNL ++ + + A+++ A+EYL
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV + + ++DF LS
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 85 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 137
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 138 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 242
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 243 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 302
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 303 LDSDKRIT----AAQALAHAYF 320
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 92 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 144
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 145 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 191
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 190 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 249
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 250 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 309
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 310 LDSDKRIT----AAQALAHAYF 327
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 73 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 125
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 55/142 (38%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 171 LARHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 291 LDSDKRIT----AAQALAHAYF 308
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 93 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 145
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 146 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 191 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 250
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 251 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 310
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 311 LDSDKRIT----AAQALAHAYF 328
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 80 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 132
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 133 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 55/142 (38%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 297
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 298 LDSDKRIT----AAQALAHAYF 315
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 84 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 136
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 137 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 183
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 182 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 241
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 242 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 301
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 302 LDSDKRIT----AAQALAHAYF 319
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 68/150 (45%), Gaps = 4/150 (2%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++ + +LG G G VY + + A+K + + ++ L A +EI H
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KH 275
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L L + + ++ EF + GNL ++ + + + A+++ A+EYL
Sbjct: 276 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 335
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++R+L N LV + + ++DF LS
Sbjct: 336 KKNFIHRNLAARNCLVGENHLVKVADFGLS 365
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+L++RLG G G V++ G +T A+K + + S++ L E ++ L H
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQH 67
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y ++ E+ G+L + T + A+++ + ++
Sbjct: 68 QRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL+ N+LV D ++DF L+
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNV 378
++ APE I D W+FGI L E++ HG P+ G N + N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 70 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 122
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 123 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 169
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 168 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 227
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 228 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 287
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 288 LDSDKRIT----AAQALAHAYF 305
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++ + +LG G G VY + + A+K + + ++ L A +EI H
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KH 69
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L L + + ++ EF + GNL ++ + + A+++ A+EYL
Sbjct: 70 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV + + ++DF LS
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLS 159
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 96 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 148
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 149 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 195
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 194 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 253
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 254 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 313
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 314 LDSDKRIT----AAQALAHAYF 331
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 73 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 125
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ FV T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 171 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 291 LDSDKRIT----AAQALAHAYF 308
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 80 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 132
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 133 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 178 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 297
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 298 LDSDKRIT----AAQALAHAYF 315
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 80 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 132
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 133 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 55/142 (38%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 297
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 298 LDSDKRIT----AAQALAHAYF 315
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 73 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 125
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ FV T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 171 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 291 LDSDKRIT----AAQALAHAYF 308
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 73 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 125
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 291 LDSDKRIT----AAQALAHAYF 308
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 78 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 130
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 131 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 236 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 295
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 296 LDSDKRIT----AAQALAHAYF 313
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 73 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 125
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 291 LDSDKRIT----AAQALAHAYF 308
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++ + +LG G G VY + + A+K + + ++ L A +EI H
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KH 70
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L L + + ++ EF + GNL ++ + + A+++ A+EYL
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV + + ++DF LS
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLS 160
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 79 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 131
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 132 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 237 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 296
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 297 LDSDKRIT----AAQALAHAYF 314
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 75 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 127
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 128 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 233 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 292
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 293 LDSDKRIT----AAQALAHAYF 310
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 14/163 (8%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--- 147
+ S + + +G G G+VY + + A+K + + + L T RE+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK---SVRVPNGEEGLPISTVREVALL 57
Query: 148 --LGLLDHPFLPTLYSYFETDKF-----YCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF 200
L +HP + L T + LV E +L + K P + +
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKD 116
Query: 201 FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ L L++LH IV+RDLKPEN+LV G + L+DF L+
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 159
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 25/115 (21%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVGQPL 383
V T Y APE++ + + VD W+ G E+ F G L F+++G P
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 231
Query: 384 R-------------FPE---------TPQVSFVARDLIRGLLVKEPHKRIAYKRG 416
FP P++ L+ +L PHKRI+ R
Sbjct: 232 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRA 286
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 78 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 130
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 131 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 177
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 236 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 295
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 296 LDSDKRIT----AAQALAHAYF 313
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 73 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 125
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 291 LDSDKRIT----AAQALAHAYF 308
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 78 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 130
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 131 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 236 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 295
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 296 LDSDKRIT----AAQALAHAYF 313
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 72 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 124
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 125 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 171
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 170 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 229
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 230 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 289
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 290 LDSDKRIT----AAQALAHAYF 307
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 73 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 125
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 291 LDSDKRIT----AAQALAHAYF 308
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++ + +LG G G VY + + A+K + + ++ L A +EI H
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KH 72
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L L + + ++ EF + GNL ++ + + A+++ A+EYL
Sbjct: 73 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 132
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV + + ++DF LS
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLS 162
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 80 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 132
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 133 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 55/142 (38%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 297
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 298 LDSDKRIT----AAQALAHAYF 315
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 75 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 127
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 128 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 233 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 292
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 293 LDSDKRIT----AAQALAHAYF 310
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+L++RLG G G V++ G +T A+K + + S++ L E ++ L H
Sbjct: 13 ETLKLVERLGAGQAGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQH 67
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y ++ E+ G+L + T + A+++ + ++
Sbjct: 68 QRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL+ N+LV D ++DF L+
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNV 378
++ APE I D W+FGI L E++ HG P+ G N + N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 73 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 125
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 291 LDSDKRIT----AAQALAHAYF 308
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 73 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 125
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 291 LDSDKRIT----AAQALAHAYF 308
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 83 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 135
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 136 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 182
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 181 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 240
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 241 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 300
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 301 LDSDKRIT----AAQALAHAYF 318
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++ + +LG G G VY + + A+K + + ++ L A +EI H
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KH 73
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L L + + ++ EF + GNL ++ + + A+++ A+EYL
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV + + ++DF LS
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 10/152 (6%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMK--VMDKASLASRNKLLRAQTEREILGLLD 152
+F+ L RLG+G G V+ V + +A+K + R + L E +G
Sbjct: 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVG--Q 115
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQ--KQPNKYFTEDAARFFASEVLLALE 210
HP L +E L E C SL+Q + E + + LLAL
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTELCG----PSLQQHCEAWGASLPEAQVWGYLRDTLLALA 171
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL 242
+LH G+V+ D+KP N+ + G L DF L
Sbjct: 172 HLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL 203
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 20/133 (15%)
Query: 309 GALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHG-----------SAVDWWTFGIFLY 357
G ++ + T+V S VG Y+ PE I+ D W+ G LY
Sbjct: 199 GIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 258
Query: 358 ELLHGTTPFKGQGNRATLFNVVGQP---LRFPETPQVSFVARDLIRGLLVKEPHKRIAYK 414
+ +G TPF+ N+ + + + P + FP+ P+ +D+++ L ++P +RI+
Sbjct: 259 YMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQRIS-- 314
Query: 415 RGATEIKQHPFFE 427
E+ HP+ +
Sbjct: 315 --IPELLAHPYVQ 325
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH-- 153
+ +LK++G G V+ V L +A+K ++ A L + E L L
Sbjct: 58 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 115
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
+ LY Y TD++ +VME C +L+S +K+ K + + +L A+ +H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 172
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
GIV+ DLKP N L+ D G + L DF ++
Sbjct: 173 QHGIVHSDLKPANFLIVD-GMLKLIDFGIA 201
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 96 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 148
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 149 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 195
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 194 LARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 253
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 254 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 313
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 314 LDSDKRIT----AAQALAHAYF 331
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++ + +LG G G VY + + A+K + + ++ L A +EI H
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KH 70
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L L + + ++ EF + GNL ++ + + A+++ A+EYL
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV + + ++DF LS
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLS 160
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 73 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 125
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 291 LDSDKRIT----AAQALAHAYF 308
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 78 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 130
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 131 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 177
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 236 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 295
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 296 LDSDKRIT----AAQALAHAYF 313
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 75 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 127
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 128 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 233 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 292
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 293 LDSDKRIT----AAQALAHAYF 310
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 73 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 125
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 291 LDSDKRIT----AAQALAHAYF 308
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 73 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 125
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 291 LDSDKRIT----AAQALAHAYF 308
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 2/137 (1%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
F +++++G G G V L + Y+A+KV+ +R+ + A ++I +
Sbjct: 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNN 96
Query: 156 LPTLY-SYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
Y F CL+ E + + N + ED + + E+L AL YL
Sbjct: 97 NIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDI-KLYCIEILKALNYLRK 155
Query: 215 LGIVYRDLKPENVLVRD 231
+ + + DLKPEN+L+ D
Sbjct: 156 MSLTHTDLKPENILLDD 172
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 325 SFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFK 367
S + T +Y APE+I G + D W+FG L EL G+ F+
Sbjct: 218 SIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+L++RLG G G V++ G +T A+K + + S++ L E ++ L H
Sbjct: 15 ETLKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQH 69
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y ++ E+ G+L + T + A+++ + ++
Sbjct: 70 QRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 128
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL+ N+LV D ++DF L+
Sbjct: 129 ERNYIHRDLRAANILVSDTLSCKIADFGLA 158
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNV 378
++ APE I D W+FGI L E++ HG P+ G N + N+
Sbjct: 177 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 225
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++ + +LG G G VY + + A+K + + ++ L A +EI H
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KH 70
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L L + + ++ EF + GNL ++ + + A+++ A+EYL
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV + + ++DF LS
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLS 160
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+L++RLG G G V++ G +T A+K + + S++ L E ++ L H
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQH 73
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y ++ E+ G+L + T + A+++ + ++
Sbjct: 74 QRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL+ N+LV D ++DF L+
Sbjct: 133 ERNYIHRDLRAANILVSDTLSCKIADFGLA 162
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNV 378
++ APE I D W+FGI L E++ HG P+ G N + N+
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 11/154 (7%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
NFR+ K++G G+ G + L + TN Y A+K+ S A + L R L
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL----EYRFYKQLGSGD 65
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+P +Y + K+ +V+E G +L L ++ F+ A +++ +EY+H
Sbjct: 66 GIPQVYYFGPCGKYNAMVLELL-GPSLEDLFD-LCDRTFSLKTVLMIAIQLISRMEYVHS 123
Query: 215 LGIVYRDLKPENVLVRDEGH-----IMLSDFDLS 243
++YRD+KPEN L+ G+ I + DF L+
Sbjct: 124 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 170 CLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLV 229
LV E + + LRQ T+ RF+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLRQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 230 RDEGHIMLSDFDLSL 244
D H L D L
Sbjct: 165 -DHEHRKLRLIDWGL 178
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL--LD 152
+F+ ++ +G G G V+ + R + +K R K + ERE+ L LD
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIK---------RVKYNNEKAEREVKALAKLD 62
Query: 153 HPFL---PTLYSYFETD-----------KFYCLV--MEFCSGGNLHSLRQKQPNKYFTED 196
H + + F+ D K CL MEFC G L +K+ + +
Sbjct: 63 HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 122
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL 242
A ++ ++Y+H ++ RDLKP N+ + D + + DF L
Sbjct: 123 LALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGL 168
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 328 GTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLH 361
GT Y++PE I + +G VD + G+ L ELLH
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLH 216
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++ + +LG G G VY + + A+K + + ++ L A +EI H
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KH 68
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L L + + ++ EF + GNL ++ + + A+++ A+EYL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV + + ++DF LS
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++ + +LG G G VY + + A+K + + ++ L A +EI H
Sbjct: 259 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KH 314
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L L + + ++ EF + GNL ++ + + A+++ A+EYL
Sbjct: 315 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 374
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++R+L N LV + + ++DF LS
Sbjct: 375 KKNFIHRNLAARNCLVGENHLVKVADFGLS 404
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+L++RLG G G V++ G +T A+K + + S++ L E ++ L H
Sbjct: 14 ETLKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQH 68
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y ++ E+ G+L + T + A+++ + ++
Sbjct: 69 QRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 127
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL+ N+LV D ++DF L+
Sbjct: 128 ERNYIHRDLRAANILVSDTLSCKIADFGLA 157
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNV 378
++ APE I D W+FGI L E++ HG P+ G N + N+
Sbjct: 176 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 224
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDK--ASLASRNKLLRAQTEREILGLL 151
N+ + +G G G VYL + T A+K +++ L ++LR T IL L
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREIT---ILNRL 82
Query: 152 DHPFLPTLYSY------FETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEV 205
++ LY + D+ Y +V+E + +L L K P + TE+ + +
Sbjct: 83 KSDYIIRLYDLIIPDDLLKFDELY-IVLEI-ADSDLKKLF-KTP-IFLTEEHIKTILYNL 138
Query: 206 LLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
LL ++H GI++RDLKP N L+ + + + DF L+
Sbjct: 139 LLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++ + +LG G G VY + + A+K + + ++ L A +EI H
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KH 68
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L L + + ++ EF + GNL ++ + + A+++ A+EYL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV + + ++DF LS
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+L++RLG G G V++ G +T A+K + + S++ L A ++ L H
Sbjct: 18 ETLKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLAEAN----LMKQLQH 72
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y ++ E+ G+L + T + A+++ + ++
Sbjct: 73 QRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 131
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL+ N+LV D ++DF L+
Sbjct: 132 ERNYIHRDLRAANILVSDTLSCKIADFGLA 161
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNV 378
++ APE I D W+FGI L E++ HG P+ G N + N+
Sbjct: 180 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 228
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 70/172 (40%), Gaps = 23/172 (13%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRG------TNTYFAMKVMDKASLASRNKLLRAQTE 144
I LS R ++ LG G VY L G T + DKA R + + E
Sbjct: 23 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF---RHE 79
Query: 145 REILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS---LRQKQPNKYFTEDAARF- 200
+ L HP + L D+ ++ +CS G+LH +R + T+D
Sbjct: 80 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 139
Query: 201 ----------FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL 242
+++ +EYL +V++DL NVLV D+ ++ +SD L
Sbjct: 140 SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL 191
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 6/156 (3%)
Query: 88 GPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
G I S ++ +G G G V+L + A+K + + +++ + + E E+
Sbjct: 1 GSVIDPSELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFI----EEAEV 55
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ L HP L LY CLV EF G L + Q F + +V
Sbjct: 56 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCE 114
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +++RDL N LV + I +SDF ++
Sbjct: 115 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT 150
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/49 (22%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNV 378
++ +PE+ + S D W+FG+ ++E+ G P++ + N + ++
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 15/159 (9%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL--------LRAQTEREI 147
+ +LK +G G G V + + A+K++ R LR Q +
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNT 158
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ ++ + F C+ E S NL+ L +K + F+ R FA +L
Sbjct: 159 MNVIH------MLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
L+ LH I++ DLKPEN+L++ +G + D C
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHG--TTPFKGQGNR-ATLFNV 378
R + + + Y APE+I G +G +D W+ G L ELL G P + +G++ A + +
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIEL 314
Query: 379 VGQP 382
+G P
Sbjct: 315 LGMP 318
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 70/172 (40%), Gaps = 23/172 (13%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRG------TNTYFAMKVMDKASLASRNKLLRAQTE 144
I LS R ++ LG G VY L G T + DKA R + + E
Sbjct: 6 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF---RHE 62
Query: 145 REILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS---LRQKQPNKYFTEDAARF- 200
+ L HP + L D+ ++ +CS G+LH +R + T+D
Sbjct: 63 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Query: 201 ----------FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL 242
+++ +EYL +V++DL NVLV D+ ++ +SD L
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL 174
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+L++RLG G G V++ G +T A+K + + S++ L E ++ L H
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQH 67
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y ++ E+ G+L + T + A+++ + ++
Sbjct: 68 QRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL+ N+LV D ++DF L+
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNV 378
++ APE I D W+FGI L E++ HG P+ G N + N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 11/154 (7%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
NFR+ K++G G+ G + L + TN Y A+K+ S A + L R L
Sbjct: 31 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL----EYRFYKQLGSGD 86
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
+P +Y + K+ +V+E G +L L ++ F+ A +++ +EY+H
Sbjct: 87 GIPQVYYFGPCGKYNAMVLELL-GPSLEDLFD-LCDRTFSLKTVLMIAIQLISRMEYVHS 144
Query: 215 LGIVYRDLKPENVLVRDEGH-----IMLSDFDLS 243
++YRD+KPEN L+ G+ I + DF L+
Sbjct: 145 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 178
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 15/167 (8%)
Query: 85 SLRGPPIGLS--NFRLLKRLGYGDIGSVY---LVELRGTNTYFAMKVMDK-ASLASRNKL 138
S+ GP G++ + L + LG G G VY +G A+K K +L ++ K
Sbjct: 1 SMGGPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKF 60
Query: 139 LRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL-HSL-RQKQPNKYFTED 196
+ +E I+ LDHP + L E + + ++ME G L H L R K K T
Sbjct: 61 M---SEAVIMKNLDHPHIVKLIGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLT-- 114
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++ ++ A+ YL + V+RD+ N+LV + L DF LS
Sbjct: 115 -LVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 160
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++ + +LG G G VY + + A+K + + ++ L A +EI H
Sbjct: 217 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KH 272
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L L + + ++ EF + GNL ++ + + A+++ A+EYL
Sbjct: 273 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 332
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++R+L N LV + + ++DF LS
Sbjct: 333 KKNFIHRNLAARNCLVGENHLVKVADFGLS 362
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
++ + +LG G G VY + + A+K + + ++ L A +EI H
Sbjct: 26 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KH 81
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L L + + ++ EF + GNL ++ + + A+++ A+EYL
Sbjct: 82 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 141
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV + + ++DF LS
Sbjct: 142 KKNFIHRDLAARNCLVGENHLVKVADFGLS 171
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 73 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 125
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLA 172
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 58/151 (38%), Gaps = 34/151 (22%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTT 364
C L +A T+ +V T Y APEI+ H VD W+ G + ELL G T
Sbjct: 162 CELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 365 PFKGQGNRATL---FNVVGQP-----------------LRFPETPQVSF---------VA 395
F G + L +VG P + P+++F +A
Sbjct: 222 LFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLA 281
Query: 396 RDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
DL+ +LV + KRI A + H +F
Sbjct: 282 VDLLEKMLVLDSDKRIT----AAQALAHAYF 308
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
S ++ +G G G V+L + A+K + + S++ + + E E++ L H
Sbjct: 27 SELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIKEGSMSEDDFI----EEAEVMMKLSH 81
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L LY CLV EF G L + Q F + +V + YL
Sbjct: 82 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLE 140
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+++RDL N LV + I +SDF ++
Sbjct: 141 EACVIHRDLAARNCLVGENQVIKVSDFGMT 170
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/49 (22%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNV 378
++ +PE+ + S D W+FG+ ++E+ G P++ + N + ++
Sbjct: 189 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 237
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+L++RLG G G V++ G +T A+K + + S++ L E ++ L H
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQH 67
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y ++ E+ G+L + T + A+++ + ++
Sbjct: 68 QRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL+ N+LV D ++DF L+
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNV 378
++ APE I D W+FGI L E++ HG P+ G N + N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 72/166 (43%), Gaps = 15/166 (9%)
Query: 85 SLRGPPIGLSNFRLLKRLGYGDIGSVYL-VELRGTNTYFAMKVMDKASLAS---RNKLLR 140
S R I L + +G G G V+ + + N A+ + + S R K L+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 141 -AQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAAR 199
A T R+ DHP + L + + ++ME C+ G L S Q + F+ D A
Sbjct: 61 EALTMRQ----FDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQV---RKFSLDLAS 112
Query: 200 F--FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+A ++ AL YL V+RD+ NVLV + L DF LS
Sbjct: 113 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 8/122 (6%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
+L S + DFG L M + T ++ +++APE I SA D
Sbjct: 142 VLVSSNDCVKLGDFG------LSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDV 195
Query: 350 WTFGIFLYE-LLHGTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPH 408
W FG+ ++E L+HG PF+G N + + R P P L+ +P
Sbjct: 196 WMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPPNCPPTLYSLMTKCWAYDPS 254
Query: 409 KR 410
+R
Sbjct: 255 RR 256
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 15/159 (9%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL--------LRAQTEREI 147
+ +LK +G G G V + + A+K++ R LR Q +
Sbjct: 99 YEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNT 158
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ ++ + F C+ E S NL+ L +K + F+ R FA +L
Sbjct: 159 MNVIH------MLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
L+ LH I++ DLKPEN+L++ +G + D C
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHG--TTPFKGQGNR-ATLFNV 378
R + + Y APE+I G +G +D W+ G L ELL G P + +G++ A + +
Sbjct: 255 RVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIEL 314
Query: 379 VGQP 382
+G P
Sbjct: 315 LGMP 318
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 325 SFVGTHEYLAPEII-RG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGN-RATLFNVVGQ 381
+F GT +Y+APEII +G G+G A D W+ G + E+ G PF G +A +F VG
Sbjct: 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK-VGM 240
Query: 382 PLRFPETPQ-VSFVARDLIRGLLVKEPHKR 410
PE P+ +S A+ I +P KR
Sbjct: 241 FKVHPEIPESMSAEAKAFILKCFEPDPDKR 270
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSL-RQKQPNKYFTEDAARFFASEVLLAL 209
L H + F + F + ME GG+L +L R K E F+ ++L L
Sbjct: 76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 135
Query: 210 EYLHMLGIVYRDLKPENVLVRD-EGHIMLSDFDLSLRCS 247
+YLH IV+RD+K +NVL+ G + +SDF S R +
Sbjct: 136 KYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 174
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 15/159 (9%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL--------LRAQTEREI 147
+ +LK +G G G V + + A+K++ R LR Q +
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNT 158
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ ++ + F C+ E S NL+ L +K + F+ R FA +L
Sbjct: 159 MNVIH------MLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRC 246
L+ LH I++ DLKPEN+L++ +G + D C
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHG--TTPFKGQGNR-ATLFNV 378
R + + + Y APE+I G +G +D W+ G L ELL G P + +G++ A + +
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIEL 314
Query: 379 VGQP 382
+G P
Sbjct: 315 LGMP 318
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 64/156 (41%), Gaps = 6/156 (3%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELR---GTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
I S + K +G GD G V LR + A+K + KA R + +E I
Sbjct: 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL-KAGYTERQRR-DFLSEASI 103
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+G DHP + L + +V E+ G+L + + ++ V
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG-VGA 162
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL LG V+RDL NVLV +SDF LS
Sbjct: 163 GMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLS 198
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNV 378
+ APE I SA D W+FG+ ++E+L +G P+ NR + +V
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 25/174 (14%)
Query: 95 NFRLLKRLGYGDIGSVY---LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
N L K LG G+ G V L+G Y + V AS ++L +E +L +
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQP--------------------- 189
+HP + LY D L++E+ G+L LR+ +
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 190 NKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ T FA ++ ++YL + +V+RDL N+LV + + +SDF LS
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLS 197
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+L++RLG G G V++ G +T A+K + + S++ L E ++ L H
Sbjct: 8 ETLKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQH 62
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y ++ E+ G+L + T + A+++ + ++
Sbjct: 63 QRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 121
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL+ N+LV D ++DF L+
Sbjct: 122 ERNYIHRDLRAANILVSDTLSCKIADFGLA 151
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNV 378
++ APE I D W+FGI L E++ HG P+ G N + N+
Sbjct: 170 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 218
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 13/165 (7%)
Query: 85 SLRGPPIGLSNFRLLKRLGYGDIGSVYL-VELRGTNTYFAMKVMDKASLAS---RNKLLR 140
S R I L + +G G G V+ + + N A+ + + S R K L+
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 141 -AQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAAR 199
A T R+ DHP + L + + ++ME C+ G L S Q + KY + A+
Sbjct: 66 EALTMRQ----FDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVR--KYSLDLASL 118
Query: 200 -FFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+A ++ AL YL V+RD+ NVLV + L DF LS
Sbjct: 119 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 163
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYE-LLHGTTPFKGQGNRATLFNVVGQPLRFPETP 389
+++APE I SA D W FG+ ++E L+HG PF+G N + + R P P
Sbjct: 182 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP 240
Query: 390 QVSFVARDLIRGLLVKEPHKR 410
L+ +P +R
Sbjct: 241 NCPPTLYSLMTKCWAYDPSRR 261
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 12/156 (7%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMD---KASLASRNKLLRAQTEREI 147
I S L R+G G G+VY + G +KV+D + A RN++ + R +
Sbjct: 33 IEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHV 92
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
LL Y D +V ++C G +L+ Q K F A +
Sbjct: 93 NILL-------FMGYMTKDNL-AIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQ 143
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++YLH I++RD+K N+ + + + + DF L+
Sbjct: 144 GMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLA 179
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 328 GTHEYLAPEIIRGEGHGS---AVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
G+ ++APE+IR + + D +++GI LYEL+ G P+ NR + +VG+
Sbjct: 196 GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYA 255
Query: 385 FPETPQV 391
P+ ++
Sbjct: 256 SPDLSKL 262
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 64/156 (41%), Gaps = 6/156 (3%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELR---GTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
I S + K +G GD G V LR + A+K + KA R + +E I
Sbjct: 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL-KAGYTERQRR-DFLSEASI 103
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+G DHP + L + +V E+ G+L + + ++ V
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG-VGA 162
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL LG V+RDL NVLV +SDF LS
Sbjct: 163 GMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLS 198
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNV 378
+ APE I SA D W+FG+ ++E+L +G P+ NR + +V
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 13/154 (8%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQ--TEREILG 149
+ L +++G G+ G V+ LR NT A+K + R L L+A+ E IL
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRLRADNTLVAVK-------SCRETLPPDLKAKFLQEARILK 167
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLAL 209
HP + L + +VME GG+ + + + + + + + +
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVG-DAAAGM 226
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
EYL ++RDL N LV ++ + +SDF +S
Sbjct: 227 EYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
Query: 280 CMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIR 339
C+ L ++KN SDFG A + A +R + ++ APE +
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEA-DGVXAASGGLRQVPV----KWTAPEALN 288
Query: 340 GEGHGSAVDWWTFGIFLYELLH-GTTPFKGQGNRAT 374
+ S D W+FGI L+E G +P+ N+ T
Sbjct: 289 YGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT 324
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 20/133 (15%)
Query: 309 GALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHG-----------SAVDWWTFGIFLY 357
G ++ + V S VGT Y+ PE I+ D W+ G LY
Sbjct: 171 GIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 230
Query: 358 ELLHGTTPFKGQGNRATLFNVVGQP---LRFPETPQVSFVARDLIRGLLVKEPHKRIAYK 414
+ +G TPF+ N+ + + + P + FP+ P+ +D+++ L ++P +RI+
Sbjct: 231 YMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL--QDVLKCCLKRDPKQRIS-- 286
Query: 415 RGATEIKQHPFFE 427
E+ HP+ +
Sbjct: 287 --IPELLAHPYVQ 297
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH-- 153
+ +LK++G G V+ V L +A+K ++ A L + E L L
Sbjct: 30 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 87
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
+ LY Y TD++ +VME C +L+S +K+ K + + +L A+ +H
Sbjct: 88 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH 144
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
GIV+ DLKP N L+ D G + L DF ++
Sbjct: 145 QHGIVHSDLKPANFLIVD-GMLKLIDFGIA 173
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 26/154 (16%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTL 159
K +G G G V+ +L ++ KV+ +R E +I+ ++ HP + L
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR--------ELQIMRIVKHPNVVDL 97
Query: 160 YSYF------ETDKFYCLVMEFC------SGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
++F + + F LV+E+ + + L+Q P + + ++L
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLI-----KLYMYQLLR 152
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
+L Y+H +GI +RD+KP+N+L+ G + L DF
Sbjct: 153 SLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDF 186
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 59/150 (39%), Gaps = 36/150 (24%)
Query: 323 SMSFVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTTPFKGQG---NRATLFNV 378
++S + + Y APE+I G + + +D W+ G + EL+ G F G+ + V
Sbjct: 198 NVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKV 257
Query: 379 VGQPLR--------------FPET----------PQVSFVARDLIRGLLVKEPHKRIAYK 414
+G P R FP+ P+ A DLI LL P R+
Sbjct: 258 LGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLT-- 315
Query: 415 RGATEIKQHPFFEGVNWALVR----SALPP 440
A E HPFF+ + R LPP
Sbjct: 316 --AIEALCHPFFDELRTGEARMPNGRELPP 343
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 73 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 125
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + D+ L+
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLA 172
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 291 LDSDKRIT----AAQALAHAYF 308
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 13/165 (7%)
Query: 85 SLRGPPIGLSNFRLLKRLGYGDIGSVYL-VELRGTNTYFAMKVMDKASLAS---RNKLLR 140
S R I L + +G G G V+ + + N A+ + + S R K L+
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 141 -AQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAAR 199
A T R+ DHP + L + + ++ME C+ G L S Q + KY + A+
Sbjct: 89 EALTMRQ----FDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVR--KYSLDLASL 141
Query: 200 -FFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+A ++ AL YL V+RD+ NVLV + L DF LS
Sbjct: 142 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 186
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYE-LLHGTTPFKGQGNRATLFNVVGQPLRFPETP 389
+++APE I SA D W FG+ ++E L+HG PF+G N + + R P P
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP 263
Query: 390 QVSFVARDLIRGLLVKEPHKR 410
L+ +P +R
Sbjct: 264 NCPPTLYSLMTKCWAYDPSRR 284
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 13/165 (7%)
Query: 85 SLRGPPIGLSNFRLLKRLGYGDIGSVYL-VELRGTNTYFAMKVMDKASLAS---RNKLLR 140
S R I L + +G G G V+ + + N A+ + + S R K L+
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 141 -AQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAAR 199
A T R+ DHP + L + + ++ME C+ G L S Q + KY + A+
Sbjct: 63 EALTMRQ----FDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVR--KYSLDLASL 115
Query: 200 -FFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+A ++ AL YL V+RD+ NVLV + L DF LS
Sbjct: 116 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 160
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYE-LLHGTTPFKGQGNRATLFNVVGQPLRFPETP 389
+++APE I SA D W FG+ ++E L+HG PF+G N + + R P P
Sbjct: 179 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP 237
Query: 390 QVSFVARDLIRGLLVKEPHKR 410
L+ +P +R
Sbjct: 238 NCPPTLYSLMTKCWAYDPSRR 258
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 13/165 (7%)
Query: 85 SLRGPPIGLSNFRLLKRLGYGDIGSVYL-VELRGTNTYFAMKVMDKASLAS---RNKLLR 140
S R I L + +G G G V+ + + N A+ + + S R K L+
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 141 -AQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAAR 199
A T R+ DHP + L + + ++ME C+ G L S Q + KY + A+
Sbjct: 64 EALTMRQ----FDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVR--KYSLDLASL 116
Query: 200 -FFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+A ++ AL YL V+RD+ NVLV + L DF LS
Sbjct: 117 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 161
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYE-LLHGTTPFKGQGNRATLFNVVGQPLRFPETP 389
+++APE I SA D W FG+ ++E L+HG PF+G N + + R P P
Sbjct: 180 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP 238
Query: 390 QVSFVARDLIRGLLVKEPHKR 410
L+ +P +R
Sbjct: 239 NCPPTLYSLMTKCWAYDPSRR 259
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 325 SFVGTHEYLAPEII-RG-EGHGSAVDWWTFGIFLYELLHGTTPFKGQGN-RATLFNVVGQ 381
+F GT +Y+APEII +G G+G A D W+ G + E+ G PF G +A +F VG
Sbjct: 168 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK-VGM 226
Query: 382 PLRFPETPQ-VSFVARDLIRGLLVKEPHKR 410
PE P+ +S A+ I +P KR
Sbjct: 227 FKVHPEIPESMSAEAKAFILKCFEPDPDKR 256
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSL-RQKQPNKYFTEDAARFFASEVLLAL 209
L H + F + F + ME GG+L +L R K E F+ ++L L
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 121
Query: 210 EYLHMLGIVYRDLKPENVLVRD-EGHIMLSDFDLSLRCS 247
+YLH IV+RD+K +NVL+ G + +SDF S R +
Sbjct: 122 KYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 160
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 18/170 (10%)
Query: 78 WDAINMISLRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNK 137
WD + + G +++L+++LG G V+ N +K++ +NK
Sbjct: 24 WDYASHVVEWG---NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KNK 77
Query: 138 LLRAQTEREIL-GLLDHPFLPTLYSYFE--TDKFYCLVMEFCSGGNLHSLRQKQPNKYFT 194
+ R E +IL L P + TL + + LV E + + L Q T
Sbjct: 78 IKR---EIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT-----LT 129
Query: 195 EDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSL 244
+ RF+ E+L AL+Y H +GI++RD+KP NV++ D H L D L
Sbjct: 130 DYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI-DHEHRKLRLIDWGL 178
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 13/154 (8%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQ--TEREILG 149
+ L +++G G+ G V+ LR NT A+K + R L L+A+ E IL
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRLRADNTLVAVK-------SCRETLPPDLKAKFLQEARILK 167
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLAL 209
HP + L + +VME GG+ + + + + + + + +
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVG-DAAAGM 226
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
EYL ++RDL N LV ++ + +SDF +S
Sbjct: 227 EYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
Query: 280 CMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIR 339
C+ L ++KN SDFG A + A +R + ++ APE +
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEA-DGVYAASGGLRQVPV----KWTAPEALN 288
Query: 340 GEGHGSAVDWWTFGIFLYELLH-GTTPFKGQGNRAT 374
+ S D W+FGI L+E G +P+ N+ T
Sbjct: 289 YGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT 324
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 25/174 (14%)
Query: 95 NFRLLKRLGYGDIGSVY---LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
N L K LG G+ G V L+G Y + V AS ++L +E +L +
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQP--------------------- 189
+HP + LY D L++E+ G+L LR+ +
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 190 NKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ T FA ++ ++YL + +V+RDL N+LV + + +SDF LS
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLS 197
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
S ++ +G G G V+L + A+K + + +++ + + E E++ L H
Sbjct: 10 SELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFI----EEAEVMMKLSH 64
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L LY CLV EF G L + Q F + +V + YL
Sbjct: 65 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLE 123
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+++RDL N LV + I +SDF ++
Sbjct: 124 EACVIHRDLAARNCLVGENQVIKVSDFGMT 153
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/49 (22%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNV 378
++ +PE+ + S D W+FG+ ++E+ G P++ + N + ++
Sbjct: 172 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 220
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 64/154 (41%), Gaps = 8/154 (5%)
Query: 97 RLLKR---LGYGDIGSVYLVEL--RGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
R LKR LG G G V L G NT + V + N + + E EIL L
Sbjct: 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL 80
Query: 152 DHPFLPTLYSYFETD--KFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLAL 209
H + D L+MEF G+L K NK + ++ A ++ +
Sbjct: 81 YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY-AVQICKGM 139
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+YL V+RDL NVLV E + + DF L+
Sbjct: 140 DYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT 173
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 13/165 (7%)
Query: 85 SLRGPPIGLSNFRLLKRLGYGDIGSVYL-VELRGTNTYFAMKVMDKASLAS---RNKLLR 140
S R I L + +G G G V+ + + N A+ + + S R K L+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 141 -AQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAAR 199
A T R+ DHP + L + + ++ME C+ G L S Q + KY + A+
Sbjct: 61 EALTMRQ----FDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVR--KYSLDLASL 113
Query: 200 -FFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+A ++ AL YL V+RD+ NVLV + L DF LS
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYE-LLHGTTPFKGQGNRATLFNVVGQPLRFPETP 389
+++APE I SA D W FG+ ++E L+HG PF+G N + + R P P
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP 235
Query: 390 QVSFVARDLIRGLLVKEPHKR 410
L+ +P +R
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRR 256
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 85 SLRGPPIGLSNFRLLKRLGYGDIGSVYL-VELRGTNTYFAMKVMDKASLASRNKLLRAQT 143
S R I L + +G G G V+ + + N AM V K + +R +
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENP--AMAVAIKTCKNCTSDSVREKF 58
Query: 144 EREILGL--LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAAR-F 200
+E L + DHP + L + + ++ME C+ G L S Q + KY + A+
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVR--KYSLDLASLIL 115
Query: 201 FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+A ++ AL YL V+RD+ NVLV + L DF LS
Sbjct: 116 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYE-LLHGTTPFKGQGNRATLFNVVGQPLRFPETP 389
+++APE I SA D W FG+ ++E L+HG PF+G N + + R P P
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP 235
Query: 390 QVSFVARDLIRGLLVKEPHKR 410
L+ +P +R
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRR 256
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 25/174 (14%)
Query: 95 NFRLLKRLGYGDIGSVY---LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
N L K LG G+ G V L+G Y + V AS ++L +E +L +
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQP--------------------- 189
+HP + LY D L++E+ G+L LR+ +
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 190 NKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ T FA ++ ++YL + +V+RDL N+LV + + +SDF LS
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLS 197
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
S ++ +G G G V+L + A+K + + +++ + + E E++ L H
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFI----EEAEVMMKLSH 62
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L LY CLV EF G L + Q F + +V + YL
Sbjct: 63 PKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLE 121
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+++RDL N LV + I +SDF ++
Sbjct: 122 EACVIHRDLAARNCLVGENQVIKVSDFGMT 151
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/49 (22%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNV 378
++ +PE+ + S D W+FG+ ++E+ G P++ + N + ++
Sbjct: 170 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 95 NFRLLKRLGYGDIGSVYLVELR----GTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ + L++LG G+ GSV + T A+K K ++ L + E EIL
Sbjct: 14 HLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 70
Query: 151 LDHPFLPTL--YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF--FASEVL 206
L H + Y + L+MEF G+L QK + D + + S++
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERI---DHIKLLQYTSQIC 127
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL N+LV +E + + DF L+
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
IL +NR DFG + LP+ E V+ Y APE + A D
Sbjct: 148 ILVENENRVKIGDFG--LTKVLPQ-DKEXXKVKEPGESPIFWY-APESLTESKFSVASDV 203
Query: 350 WTFGIFLYELL 360
W+FG+ LYEL
Sbjct: 204 WSFGVVLYELF 214
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 16/166 (9%)
Query: 87 RGPP---IGLSNFRLLKRLGYGDIGSVY---LVELRGTNTYFAMKVMDK-ASLASRNKLL 139
RG P I + L + LG G G VY +G A+K K +L ++ K +
Sbjct: 14 RGSPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFM 73
Query: 140 RAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL-HSL-RQKQPNKYFTEDA 197
+E I+ LDHP + L E + + ++ME G L H L R K K T
Sbjct: 74 ---SEAVIMKNLDHPHIVKLIGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLT--- 126
Query: 198 ARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++ ++ A+ YL + V+RD+ N+LV + L DF LS
Sbjct: 127 LVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 172
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 57/148 (38%), Gaps = 44/148 (29%)
Query: 319 TNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQ--------- 369
TN +V T Y APE+I G G+ + VD W+ G + EL+ G F+G
Sbjct: 178 TNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKV 237
Query: 370 ----GNRATLFNVVGQPL------RFPETPQVSF---------------------VARDL 398
G + F QP P+ P + F ARDL
Sbjct: 238 IEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDL 297
Query: 399 IRGLLVKEPHKRIAYKRGATEIKQHPFF 426
+ +LV +P KRI+ E +HP+
Sbjct: 298 LSKMLVIDPDKRIS----VDEALRHPYI 321
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 93 LSNFRLLKRLGYGDIGSVYLV--ELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
L ++ LK +G G G V + G N A+K + + ++ RA E +L
Sbjct: 23 LKRYQQLKPIGSGAQGIVCAAFDTVLGINV--AVKKLSR-PFQNQTHAKRAYRELVLLKC 79
Query: 151 LDHPFLPTLYSYF-------ETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFAS 203
++H + +L + F E Y LVME + + + +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVY-LVMELMDANLCQVIHME-----LDHERMSYLLY 133
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
S ++ +G G G V+L + A+K + + +++ + + E E++ L H
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFI----EEAEVMMKLSH 59
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
P L LY CLV EF G L + Q F + +V + YL
Sbjct: 60 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLE 118
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+++RDL N LV + I +SDF ++
Sbjct: 119 EACVIHRDLAARNCLVGENQVIKVSDFGMT 148
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/49 (22%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNV 378
++ +PE+ + S D W+FG+ ++E+ G P++ + N + ++
Sbjct: 167 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 11/164 (6%)
Query: 85 SLRGPPIGLSNFRLLKRLGYGDIGSVYL-VELRGTNTYFAMKVMDKASLASRNKLLRAQT 143
S R I L + +G G G V+ + + N AM V K + +R +
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENP--AMAVAIKTCKNCTSDSVREKF 58
Query: 144 EREILGL--LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF- 200
+E L + DHP + L + + ++ME C+ G L S Q + F+ D A
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQV---RKFSLDLASLI 114
Query: 201 -FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+A ++ AL YL V+RD+ NVLV + L DF LS
Sbjct: 115 LYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS 158
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYE-LLHGTTPFKGQGNRATLFNVVGQPLRFPETP 389
+++APE I SA D W FG+ ++E L+HG PF+G N + + R P P
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP 235
Query: 390 QVSFVARDLIRGLLVKEPHKR 410
L+ +P +R
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRR 256
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 64/154 (41%), Gaps = 8/154 (5%)
Query: 97 RLLKR---LGYGDIGSVYLVEL--RGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
R LKR LG G G V L G NT + V + N + + E EIL L
Sbjct: 9 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL 68
Query: 152 DHPFLPTLYSYFETD--KFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLAL 209
H + D L+MEF G+L K NK + ++ A ++ +
Sbjct: 69 YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY-AVQICKGM 127
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+YL V+RDL NVLV E + + DF L+
Sbjct: 128 DYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT 161
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTE-REILGLLDH 153
+ R+ K++G G+ G + L + TN Y A+K+ + SR L + + LG
Sbjct: 1 SMRVGKKIGCGNFGELRLGKNLYTNEYVAIKL---EPIKSRAPQLHLEYRFYKQLGSAGE 57
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
LP +Y + K+ +V+E G +L L ++ FT A ++L +EY+H
Sbjct: 58 G-LPQVYYFGPXGKYNAMVLELL-GPSLEDLFD-LCDRTFTLKTVLMIAIQLLSRMEYVH 114
Query: 214 MLGIVYRDLKPENVLVRDEGH-----IMLSDFDLS 243
++YRD+KPEN L+ +G+ I + DF L+
Sbjct: 115 SKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLA 149
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 27/175 (15%)
Query: 89 PPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI- 147
P + L N +LL+ +G G G+VY L A+KV S A+R + E+ I
Sbjct: 8 PSLDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVF---SFANRQNFI---NEKNIY 59
Query: 148 -LGLLDHPFLPTLYSYFETDKF-----YCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFF 201
+ L++H + E Y LVME+ G+L + + + + R
Sbjct: 60 RVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVS--SCRL- 116
Query: 202 ASEVLLALEYLHML---------GIVYRDLKPENVLVRDEGHIMLSDFDLSLRCS 247
A V L YLH I +RDL NVLV+++G ++SDF LS+R +
Sbjct: 117 AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLT 171
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+L++RLG G G V++ G +T A+K + + S++ L E ++ L H
Sbjct: 9 ETLKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFL----AEANLMKQLQH 63
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ + Y ++ E+ G+L + T + A+++ + ++
Sbjct: 64 QRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 122
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++R+L+ N+LV D ++DF L+
Sbjct: 123 ERNYIHRNLRAANILVSDTLSCKIADFGLA 152
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNV 378
++ APE I D W+FGI L E++ HG P+ G N + N+
Sbjct: 171 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 219
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + T+D
Sbjct: 69 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCAK---LTDD 121
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + DF L+
Sbjct: 122 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLV 286
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 287 LDSDKRIT----AAQALAHAYF 304
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 170 CLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLV 229
LV E + + L Q T+ RF+ E+L AL+Y H +GI++RD+KP NVL+
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLI 164
Query: 230 RDEGHIMLSDFDLSL 244
D H L D L
Sbjct: 165 -DHEHRKLRLIDWGL 178
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 91 IGLSNFRL-------LKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQT 143
IG NF + + LG G G V + + A+K + +A++ S+ + R
Sbjct: 41 IGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQK-RLLM 98
Query: 144 EREI-LGLLDHPFLPTLYS--YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF 200
+ +I + +D PF T Y + E D + C+ + S + + + ED
Sbjct: 99 DLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYK-QVIDKGQTIPEDILGK 157
Query: 201 FASEVLLALEYLH-MLGIVYRDLKPENVLVRDEGHIMLSDFDLS--LRCSVSPTL 252
A ++ ALE+LH L +++RD+KP NVL+ G + + DF +S L SV+ T+
Sbjct: 158 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTI 212
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 57/148 (38%), Gaps = 44/148 (29%)
Query: 319 TNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQ--------- 369
TN +V T Y APE+I G G+ VD W+ G + EL+ G+ F+G
Sbjct: 176 TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKV 235
Query: 370 ----GNRATLFNVVGQPL------RFPETPQVSF---------------------VARDL 398
G + F QP P P ++F ARDL
Sbjct: 236 IEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDL 295
Query: 399 IRGLLVKEPHKRIAYKRGATEIKQHPFF 426
+ +LV +P KRI+ E +HP+
Sbjct: 296 LSKMLVIDPDKRIS----VDEALRHPYI 319
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 93 LSNFRLLKRLGYGDIGSVYLV--ELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
L ++ LK +G G G V + G N A+K + + ++ RA E +L
Sbjct: 21 LKRYQQLKPIGSGAQGIVCAAFDTVLGINV--AVKKLSR-PFQNQTHAKRAYRELVLLKC 77
Query: 151 LDHPFLPTLYSYFETDKF------YCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASE 204
++H + +L + F K LVME + + + + +
Sbjct: 78 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME-----LDHERMSYLLYQ 132
Query: 205 VLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVS 249
+L +++LH GI++RDLKP N++V+ + + + DF L+ S +
Sbjct: 133 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTN 177
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDK-------ASLASRN- 136
IG S F +LKR +G G G V A+K + + A A R
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYREL 74
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
L++ + I+GLL+ F P E + +VME NL + Q + +
Sbjct: 75 VLMKVVNHKNIIGLLN-VFTPQ--KSLEEFQDVYIVMELMDA-NLSQVIQME----LDHE 126
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVS 249
+ ++L+ +++LH GI++RDLKP N++V+ + + + DF L+ S
Sbjct: 127 RMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 59/160 (36%), Gaps = 46/160 (28%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF 385
+V T Y APE+I G G+ VD W+ G+ + E++ G F G + +N V + L
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPG-TDHIDQWNKVIEQLGT 243
Query: 386 PET-----------------------------PQVSF------------VARDLIRGLLV 404
P P V F ARDL+ +LV
Sbjct: 244 PSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 405 KEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE 444
+ KRI+ E QHP+ A PP IP+
Sbjct: 304 IDASKRIS----VDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYL-VELRGTNTYFAMKVMDKASLAS---RNKLLR-AQTER 145
I L + +G G G V+ + + N A+ + + S R K L+ A T R
Sbjct: 4 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 63
Query: 146 EILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAAR-FFASE 204
+ DHP + L + + ++ME C+ G L S Q + KY + A+ +A +
Sbjct: 64 Q----FDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVR--KYSLDLASLILYAYQ 116
Query: 205 VLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ AL YL V+RD+ NVLV + L DF LS
Sbjct: 117 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 155
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYE-LLHGTTPFKGQGNRATLFNVVGQPLRFPETP 389
+++APE I SA D W FG+ ++E L+HG PF+G N + + R P P
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP 232
Query: 390 QVSFVARDLIRGLLVKEPHKR 410
L+ +P +R
Sbjct: 233 NCPPTLYSLMTKCWAYDPSRR 253
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 21/160 (13%)
Query: 102 LGYGDIGSVYLVELRG-----TNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFL 156
LG G G V+L E A+K + +AS ++R Q E E+L +L H +
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDF---QREAELLTMLQHQHI 105
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQPNKYFT---EDAA---------RFFAS 203
+ + +V E+ G+L+ LR P+ ED A AS
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+V + YL L V+RDL N LV + + DF +S
Sbjct: 166 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 205
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVV-GQPLRFPET- 388
++ PE I + D W+FG+ L+E+ +G P+ N + + G+ L P
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC 285
Query: 389 -PQVSFVARDLIRGLLVKEPHKRIAYK 414
P+V + +RG +EP +R + K
Sbjct: 286 PPEVYAI----MRGCWQREPQQRHSIK 308
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 95 NFRLLKRLGYGDIGSVYLVELR----GTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ + L++LG G+ GSV + T A+K K ++ L + E EIL
Sbjct: 18 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 74
Query: 151 LDHPFLPTL--YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF--FASEVL 206
L H + Y + L+ME+ G+L QK + D + + S++
Sbjct: 75 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 131
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL N+LV +E + + DF L+
Sbjct: 132 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 168
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+ APE + A D W+FG+ LYEL
Sbjct: 190 WYAPESLTESKFSVASDVWSFGVVLYELF 218
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 170 CLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLV 229
LV E + + L Q T+ RF+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 108 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 162
Query: 230 RDEGHIMLSDFDLSL 244
D H L D L
Sbjct: 163 -DHEHRKLRLIDWGL 176
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 170 CLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLV 229
LV E + + L Q T+ RF+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 109 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
Query: 230 RDEGHIMLSDFDLSL 244
D H L D L
Sbjct: 164 -DHEHRKLRLIDWGL 177
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 170 CLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLV 229
LV E + + L Q T+ RF+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 230 RDEGHIMLSDFDLSL 244
D H L D L
Sbjct: 165 -DHEHRKLRLIDWGL 178
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 170 CLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLV 229
LV E + + L Q T+ RF+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 109 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
Query: 230 RDEGHIMLSDFDLSL 244
D H L D L
Sbjct: 164 -DHEHRKLRLIDWGL 177
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 95 NFRLLKRLGYGDIGSVYLVELR----GTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ + L++LG G+ GSV + T A+K K ++ L + E EIL
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 85
Query: 151 LDHPFLPTL--YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF--FASEVL 206
L H + Y + L+ME+ G+L QK + D + + S++
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 142
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL N+LV +E + + DF L+
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+ APE + A D W+FG+ LYEL
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 95 NFRLLKRLGYGDIGSVYLVELR----GTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ + L++LG G+ GSV + T A+K K ++ L + E EIL
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 67
Query: 151 LDHPFLPTL--YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF--FASEVL 206
L H + Y + L+ME+ G+L QK + D + + S++
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 124
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL N+LV +E + + DF L+
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
IL +NR DFG + LP+ E V+ Y APE + A D
Sbjct: 145 ILVENENRVKIGDFG--LTKVLPQ-DKEXXKVKEPGESPIFWY-APESLTESKFSVASDV 200
Query: 350 WTFGIFLYELL 360
W+FG+ LYEL
Sbjct: 201 WSFGVVLYELF 211
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 95 NFRLLKRLGYGDIGSVYLVELR----GTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ + L++LG G+ GSV + T A+K K ++ L + E EIL
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 85
Query: 151 LDHPFLPTL--YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF--FASEVL 206
L H + Y + L+ME+ G+L QK + D + + S++
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 142
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL N+LV +E + + DF L+
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
IL +NR DFG + LP+ E V+ Y APE + A D
Sbjct: 163 ILVENENRVKIGDFG--LTKVLPQ-DKEXXKVKEPGESPIFWY-APESLTESKFSVASDV 218
Query: 350 WTFGIFLYELL 360
W+FG+ LYEL
Sbjct: 219 WSFGVVLYELF 229
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 170 CLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLV 229
LV E + + L Q T+ RF+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 230 RDEGHIMLSDFDLSL 244
D H L D L
Sbjct: 165 -DHEHRKLRLIDWGL 178
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 106/301 (35%), Gaps = 75/301 (24%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELR---GTNTYFAMKVMDKA-SLASRNKLLRAQTERE 146
I +S ++ + +G G+ G V L+ + A+K + + R L +E
Sbjct: 30 IDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFL---SEAS 86
Query: 147 ILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVL 206
I+G DHP + L ++ EF G+L S +Q + FT +
Sbjct: 87 IMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL-RQNDGQFTVIQLVGMLRGIA 145
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXX 266
++YL + V+RDL N+LV +SDF LS
Sbjct: 146 AGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLS----------------------- 182
Query: 267 XXXILNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSF 326
R L ++ S + +GG +P P ++ F
Sbjct: 183 ----------------------RFL---EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKF 217
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRF 385
SA D W++GI ++E++ +G P+ N+ + N + Q R
Sbjct: 218 T-----------------SASDVWSYGIVMWEVMSYGERPYWDMTNQDVI-NAIEQDYRL 259
Query: 386 P 386
P
Sbjct: 260 P 260
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 170 CLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLV 229
LV E + + L Q T+ RF+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 230 RDEGHIMLSDFDLSL 244
D H L D L
Sbjct: 165 -DHEHRKLRLIDWGL 178
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 170 CLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLV 229
LV E + + L Q T+ RF+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 115 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 169
Query: 230 RDEGHIMLSDFDLSL 244
D H L D L
Sbjct: 170 -DHEHRKLRLIDWGL 183
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 95 NFRLLKRLGYGDIGSVYLVELR----GTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ + L++LG G+ GSV + T A+K K ++ L + E EIL
Sbjct: 16 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 72
Query: 151 LDHPFLPTL--YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF--FASEVL 206
L H + Y + L+ME+ G+L QK + D + + S++
Sbjct: 73 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 129
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL N+LV +E + + DF L+
Sbjct: 130 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 166
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
IL +NR DFG + LP+ E V+ Y APE + A D
Sbjct: 150 ILVENENRVKIGDFG--LTKVLPQ-DKEXXKVKEPGESPIFWY-APESLTESKFSVASDV 205
Query: 350 WTFGIFLYELL 360
W+FG+ LYEL
Sbjct: 206 WSFGVVLYELF 216
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 170 CLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLV 229
LV E + + L Q T+ RF+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 230 RDEGHIMLSDFDLSL 244
D H L D L
Sbjct: 165 -DHEHRKLRLIDWGL 178
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 170 CLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLV 229
LV E + + L Q T+ RF+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 230 RDEGHIMLSDFDLSL 244
D H L D L
Sbjct: 165 -DHEHRKLRLIDWGL 178
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 170 CLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLV 229
LV E + + L Q T+ RF+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 230 RDEGHIMLSDFDLSL 244
D H L D L
Sbjct: 165 -DHEHRKLRLIDWGL 178
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 73 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 125
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + F L+
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLA 172
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 291 LDSDKRIT----AAQALAHAYF 308
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 95 NFRLLKRLGYGDIGSVYLVELR----GTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ + L++LG G+ GSV + T A+K K ++ L + E EIL
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 67
Query: 151 LDHPFLPTL--YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF--FASEVL 206
L H + Y + L+ME+ G+L QK + D + + S++
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 124
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL N+LV +E + + DF L+
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+ APE + A D W+FG+ LYEL
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 170 CLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLV 229
LV E + + L Q T+ RF+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 230 RDEGHIMLSDFDLSL 244
D H L D L
Sbjct: 165 -DHEHRKLRLIDWGL 178
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 170 CLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLV 229
LV E + + L Q T+ RF+ E+L AL+Y H +GI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 230 RDEGHIMLSDFDLSL 244
D H L D L
Sbjct: 165 -DHEHRKLRLIDWGL 178
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 95 NFRLLKRLGYGDIGSVYLVELR----GTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ + L++LG G+ GSV + T A+K K ++ L + E EIL
Sbjct: 9 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 65
Query: 151 LDHPFLPTL--YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF--FASEVL 206
L H + Y + L+ME+ G+L QK + D + + S++
Sbjct: 66 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 122
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL N+LV +E + + DF L+
Sbjct: 123 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 159
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
IL +NR DFG + LP+ E V+ Y APE + A D
Sbjct: 143 ILVENENRVKIGDFG--LTKVLPQ-DKEXXKVKEPGESPIFWY-APESLTESKFSVASDV 198
Query: 350 WTFGIFLYELL 360
W+FG+ LYEL
Sbjct: 199 WSFGVVLYELF 209
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 95 NFRLLKRLGYGDIGSVYLVELR----GTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ + L++LG G+ GSV + T A+K K ++ L + E EIL
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 70
Query: 151 LDHPFLPTL--YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF--FASEVL 206
L H + Y + L+ME+ G+L QK + D + + S++
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 127
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL N+LV +E + + DF L+
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
IL +NR DFG + LP+ E V+ Y APE + A D
Sbjct: 148 ILVENENRVKIGDFG--LTKVLPQ-DKEXXKVKEPGESPIFWY-APESLTESKFSVASDV 203
Query: 350 WTFGIFLYELL 360
W+FG+ LYEL
Sbjct: 204 WSFGVVLYELF 214
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 73 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 125
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + D L+
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLA 172
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 58/151 (38%), Gaps = 34/151 (22%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTT 364
C L +A T+ +V T Y APEI+ H VD W+ G + ELL G T
Sbjct: 162 CELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 365 PFKGQGNRATL---FNVVGQP-----------------LRFPETPQVSF---------VA 395
F G + L +VG P + P+++F +A
Sbjct: 222 LFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLA 281
Query: 396 RDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
DL+ +LV + KRI A + H +F
Sbjct: 282 VDLLEKMLVLDSDKRIT----AAQALAHAYF 308
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 167 KFYCLV--MEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKP 224
K CL MEFC G L +K+ + + A ++ ++Y+H +++RDLKP
Sbjct: 105 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKP 164
Query: 225 ENVLVRDEGHIMLSDFDL 242
N+ + D + + DF L
Sbjct: 165 SNIFLVDTKQVKIGDFGL 182
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 12/85 (14%)
Query: 277 VHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPE 336
+H ++PS F ++ +K+ + DFG + L + RS GT Y++PE
Sbjct: 158 IHRDLKPSNIF--LVDTKQVKIG--DFG-----LVTSLKNDGKRTRSK---GTLRYMSPE 205
Query: 337 IIRGEGHGSAVDWWTFGIFLYELLH 361
I + +G VD + G+ L ELLH
Sbjct: 206 QISSQDYGKEVDLYALGLILAELLH 230
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 95 NFRLLKRLGYGDIGSVYLVELR----GTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ + L++LG G+ GSV + T A+K K ++ L + E EIL
Sbjct: 10 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 66
Query: 151 LDHPFLPTL--YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF--FASEVL 206
L H + Y + L+ME+ G+L QK + D + + S++
Sbjct: 67 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 123
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL N+LV +E + + DF L+
Sbjct: 124 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 160
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
IL +NR DFG + LP+ E V+ Y APE + A D
Sbjct: 144 ILVENENRVKIGDFG--LTKVLPQ-DKEXXKVKEPGESPIFWY-APESLTESKFSVASDV 199
Query: 350 WTFGIFLYELL 360
W+FG+ LYEL
Sbjct: 200 WSFGVVLYELF 210
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 95 NFRLLKRLGYGDIGSVYLVELR----GTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ + L++LG G+ GSV + T A+K K ++ L + E EIL
Sbjct: 17 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 73
Query: 151 LDHPFLPTL--YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF--FASEVL 206
L H + Y + L+ME+ G+L QK + D + + S++
Sbjct: 74 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 130
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL N+LV +E + + DF L+
Sbjct: 131 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 167
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
IL +NR DFG + LP+ E V+ Y APE + A D
Sbjct: 151 ILVENENRVKIGDFG--LTKVLPQ-DKEXXKVKEPGESPIFWY-APESLTESKFSVASDV 206
Query: 350 WTFGIFLYELL 360
W+FG+ LYEL
Sbjct: 207 WSFGVVLYELF 217
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 10/148 (6%)
Query: 100 KRLGYGDIGSV----YLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
K LG G+ G+V Y ++ + + A +++LL E ++ LD+P+
Sbjct: 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL---AEANVMQQLDNPY 431
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHML 215
+ + E + + LVME G L+ Q+ N++ + +V + ++YL
Sbjct: 432 IVRMIGICEAES-WMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEES 488
Query: 216 GIVYRDLKPENVLVRDEGHIMLSDFDLS 243
V+RDL NVL+ + + +SDF LS
Sbjct: 489 NFVHRDLAARNVLLVTQHYAKISDFGLS 516
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKG-QGNRATLFNVVGQPLRFP 386
++ APE I S D W+FG+ ++E +G P++G +G+ T G+ + P
Sbjct: 537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 594
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 10/148 (6%)
Query: 100 KRLGYGDIGSV----YLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
K LG G+ G+V Y ++ + + A +++LL E ++ LD+P+
Sbjct: 376 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL---AEANVMQQLDNPY 432
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHML 215
+ + E + + LVME G L+ Q+ N++ + +V + ++YL
Sbjct: 433 IVRMIGICEAES-WMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEES 489
Query: 216 GIVYRDLKPENVLVRDEGHIMLSDFDLS 243
V+RDL NVL+ + + +SDF LS
Sbjct: 490 NFVHRDLAARNVLLVTQHYAKISDFGLS 517
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKG-QGNRATLFNVVGQPLRFP 386
++ APE I S D W+FG+ ++E +G P++G +G+ T G+ + P
Sbjct: 538 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 595
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 95 NFRLLKRLGYGDIGSVYLVELR----GTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ + L++LG G+ GSV + T A+K K ++ L + E EIL
Sbjct: 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 98
Query: 151 LDHPFLPTL--YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF--FASEVL 206
L H + Y + L+ME+ G+L QK + D + + S++
Sbjct: 99 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 155
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL N+LV +E + + DF L+
Sbjct: 156 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 192
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
IL +NR DFG + LP+ E V+ Y APE + A D
Sbjct: 176 ILVENENRVKIGDFG--LTKVLPQ-DKEXXKVKEPGESPIFWY-APESLTESKFSVASDV 231
Query: 350 WTFGIFLYELL 360
W+FG+ LYEL
Sbjct: 232 WSFGVVLYELF 242
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 144 EREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFAS 203
E I+G DHP + L K +V E+ G+L S +K + FT
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++YL +G V+RDL N+L+ +SDF LS
Sbjct: 155 GIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ +PE I SA D W++GI L+E++ +G P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 270
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 95 NFRLLKRLGYGDIGSVYLVELR----GTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ + L++LG G+ GSV + T A+K K ++ L + E EIL
Sbjct: 15 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 71
Query: 151 LDHPFLPTL--YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF--FASEVL 206
L H + Y + L+ME+ G+L QK + D + + S++
Sbjct: 72 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 128
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL N+LV +E + + DF L+
Sbjct: 129 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 165
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
IL +NR DFG + LP+ E V+ Y APE + A D
Sbjct: 149 ILVENENRVKIGDFG--LTKVLPQ-DKEXXKVKEPGESPIFWY-APESLTESKFSVASDV 204
Query: 350 WTFGIFLYELL 360
W+FG+ LYEL
Sbjct: 205 WSFGVVLYELF 215
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 21/160 (13%)
Query: 102 LGYGDIGSVYLVELRGT-----NTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFL 156
LG G G V+L E A+K + +AS ++R Q E E+L +L H +
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDF---QREAELLTMLQHQHI 76
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQPNKYFT---EDAA---------RFFAS 203
+ + +V E+ G+L+ LR P+ ED A AS
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+V + YL L V+RDL N LV + + DF +S
Sbjct: 137 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 176
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVV-GQPLRFPET- 388
++ PE I + D W+FG+ L+E+ +G P+ N + + G+ L P
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC 256
Query: 389 -PQVSFVARDLIRGLLVKEPHKRIAYK 414
P+V + +RG +EP +R + K
Sbjct: 257 PPEVYAI----MRGCWQREPQQRHSIK 279
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 95 NFRLLKRLGYGDIGSVYLVELR----GTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ + L++LG G+ GSV + T A+K K ++ L + E EIL
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 67
Query: 151 LDHPFLPTL--YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF--FASEVL 206
L H + Y + L+ME+ G+L QK + D + + S++
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 124
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL N+LV +E + + DF L+
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
IL +NR DFG + LP+ E V+ Y APE + A D
Sbjct: 145 ILVENENRVKIGDFG--LTKVLPQ-DKEXXKVKEPGESPIFWY-APESLTESKFSVASDV 200
Query: 350 WTFGIFLYELL 360
W+FG+ LYEL
Sbjct: 201 WSFGVVLYELF 211
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 69/149 (46%), Gaps = 5/149 (3%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+ +L+K+LG G G V++ +T A+K + +++ + L E ++ L H
Sbjct: 13 SIKLVKKLGAGQFGEVWM-GYYNNSTKVAVKTLKPGTMSVQAFL----EEANLMKTLQHD 67
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM 214
L LY+ ++ ++ EF + G+L + F++++ + Y+
Sbjct: 68 KLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 127
Query: 215 LGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL+ NVLV + ++DF L+
Sbjct: 128 KNYIHRDLRAANVLVSESLMCKIADFGLA 156
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFPETP 389
++ APE I + W+FGI LYE++ +G P+ G+ N A + + + Q R P
Sbjct: 175 KWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTN-ADVMSALSQGYRMPRME 233
Query: 390 QVSFVARDLIRGLLVKEPHKR 410
D+++ ++ +R
Sbjct: 234 NCPDELYDIMKMCWKEKAEER 254
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 138 LLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDA 197
L++ + I+GLL+ F P S E Y +VME NL + Q + +
Sbjct: 76 LMKVVNHKNIIGLLN-VFTPQ-KSLEEFQDVY-IVMELMDA-NLSQVIQME----LDHER 127
Query: 198 ARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVS 249
+ ++L+ +++LH GI++RDLKP N++V+ + + + DF L+ S
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 59/160 (36%), Gaps = 46/160 (28%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF 385
+V T Y APE+I G G+ VD W+ G+ + E++ G F G + +N V + L
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPG-TDHIDQWNKVIEQLGT 243
Query: 386 PET-----------------------------PQVSF------------VARDLIRGLLV 404
P P V F ARDL+ +LV
Sbjct: 244 PSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 405 KEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE 444
+ KRI+ E QHP+ A PP IP+
Sbjct: 304 IDASKRIS----VDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 73 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 125
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H I++RDLKP N+ V ++ + + D L+
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLA 172
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 58/151 (38%), Gaps = 34/151 (22%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTT 364
C L +A T+ +V T Y APEI+ H VD W+ G + ELL G T
Sbjct: 162 CELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 365 PFKGQGNRATL---FNVVGQP-----------------LRFPETPQVSF---------VA 395
F G + L +VG P + P+++F +A
Sbjct: 222 LFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLA 281
Query: 396 RDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
DL+ +LV + KRI A + H +F
Sbjct: 282 VDLLEKMLVLDSDKRIT----AAQALAHAYF 308
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 13/160 (8%)
Query: 94 SNFRLLKRLGYGDIGSVYLV-ELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI----- 147
+ + +G G G V+ +L+ + A+K + + + + + T RE+
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALK---RVRVQTGEEGMPLSTIREVAVLRH 67
Query: 148 LGLLDHPFLPTLY---SYFETDKFYCLVMEF-CSGGNLHSLRQKQPNKYFTEDAARFFAS 203
L +HP + L+ + TD+ L + F +L + K P + +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++L L++LH +V+RDLKP+N+LV G I L+DF L+
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 31/144 (21%)
Query: 325 SFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVGQ 381
S V T Y APE++ + + VD W+ G E+ F+G + L +V+G
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 382 PL-----RFPETPQVSF-----------------VARDLIRGLLVKEPHKRIAYKRGATE 419
P R P+ +F + +DL+ L P KRI+ A
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS----AYS 293
Query: 420 IKQHPFFEGVNWALVRSALPPHIP 443
HP+F+ + + L H+P
Sbjct: 294 ALSHPYFQDLERC--KENLDSHLP 315
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 138 LLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDA 197
L++ + I+GLL+ F P S E Y +VME NL + Q + +
Sbjct: 76 LMKVVNHKNIIGLLN-VFTPQ-KSLEEFQDVY-IVMELMDA-NLSQVIQME----LDHER 127
Query: 198 ARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVS 249
+ ++L+ +++LH GI++RDLKP N++V+ + + + DF L+ S
Sbjct: 128 MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 58/160 (36%), Gaps = 46/160 (28%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF 385
+V T Y APE+I G G+ VD W+ G + E++ G F G + +N V + L
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG-TDHIDQWNKVIEQLGT 243
Query: 386 PET-----------------------------PQVSF------------VARDLIRGLLV 404
P P V F ARDL+ +LV
Sbjct: 244 PSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 405 KEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE 444
+ KRI+ E QHP+ A PP IP+
Sbjct: 304 IDASKRIS----VDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 69/150 (46%), Gaps = 5/150 (3%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+ +L+KRLG G G V++ +T A+K + +++ + L E ++ L H
Sbjct: 13 ESIKLVKRLGAGQFGEVWM-GYYNNSTKVAVKTLKPGTMSVQAFL----EEANLMKTLQH 67
Query: 154 PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLH 213
L LY+ ++ ++ E+ + G+L + F++++ + Y+
Sbjct: 68 DKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE 127
Query: 214 MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL+ NVLV + ++DF L+
Sbjct: 128 RKNYIHRDLRAANVLVSESLMCKIADFGLA 157
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFPETP 389
++ APE I D W+FGI LYE++ +G P+ G+ N A + + Q R P
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTN-ADVMTALSQGYRMPRVE 234
Query: 390 QVSFVARDLIRGLLVKEPHKR 410
D+++ ++ +R
Sbjct: 235 NCPDELYDIMKMCWKEKAEER 255
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 144 EREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFAS 203
E I+G DHP + L K +V E+ G+L S +K + FT
Sbjct: 84 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 142
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++YL +G V+RDL N+L+ +SDF LS
Sbjct: 143 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 182
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ +PE I SA D W++GI L+E++ +G P+ N+ + V + R P
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 258
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 21/160 (13%)
Query: 102 LGYGDIGSVYLVELRGT-----NTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFL 156
LG G G V+L E A+K + +AS ++R Q E E+L +L H +
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDF---QREAELLTMLQHQHI 82
Query: 157 PTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQPNKYFT---EDAA---------RFFAS 203
+ + +V E+ G+L+ LR P+ ED A AS
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+V + YL L V+RDL N LV + + DF +S
Sbjct: 143 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 182
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVV-GQPLRFPET- 388
++ PE I + D W+FG+ L+E+ +G P+ N + + G+ L P
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC 262
Query: 389 -PQVSFVARDLIRGLLVKEPHKRIAYK 414
P+V + +RG +EP +R + K
Sbjct: 263 PPEVYAI----MRGCWQREPQQRHSIK 285
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 91 IGLSNFRLLKRLGYGDIGSVY---LVELRGTNTYFAMKVMDK-ASLASRNKLLRAQTERE 146
I + L + LG G G VY +G A+K K +L ++ K + +E
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFM---SEAV 61
Query: 147 ILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL-HSL-RQKQPNKYFTEDAARFFASE 204
I+ LDHP + L E + + ++ME G L H L R K K T ++ +
Sbjct: 62 IMKNLDHPHIVKLIGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQ 117
Query: 205 VLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ A+ YL + V+RD+ N+LV + L DF LS
Sbjct: 118 ICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 156
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
+LL+ ++GLLD F P S E + Y ++ G +L+++ + Q T+D
Sbjct: 73 RLLKHMKHENVIGLLD-VFTPA-RSLEEFNDVY--LVTHLMGADLNNIVKCQK---LTDD 125
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSD 239
+F ++L L+Y+H I++RDLKP N+ V ++ + + D
Sbjct: 126 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 168
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 315 MAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRA 373
+A T+ +V T Y APEI+ H VD W+ G + ELL G T F G +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 374 TL---FNVVGQP-----------------LRFPETPQVSF---------VARDLIRGLLV 404
L +VG P + P+++F +A DL+ +LV
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 290
Query: 405 KEPHKRIAYKRGATEIKQHPFF 426
+ KRI A + H +F
Sbjct: 291 LDSDKRIT----AAQALAHAYF 308
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 20/166 (12%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTE 144
+G S F +LKR +G G G V + A+K + + ++ RA E
Sbjct: 53 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRE 111
Query: 145 REILGLLDHPFLPTLYSYF-------ETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDA 197
++ ++H + +L + F E Y LVME NL + Q + +
Sbjct: 112 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY-LVMELMDA-NLCQVIQME----LDHER 165
Query: 198 ARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 57/141 (40%), Gaps = 44/141 (31%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKG-----QGNRA------- 373
+V T Y APE+I G G+ VD W+ G + E++ F G Q N+
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282
Query: 374 ----------TLFNVV-GQP----LRFPET-PQVSF------------VARDLIRGLLVK 405
T+ N V +P L FP+ P F ARDL+ +LV
Sbjct: 283 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 342
Query: 406 EPHKRIAYKRGATEIKQHPFF 426
+P KRI+ + QHP+
Sbjct: 343 DPAKRIS----VDDALQHPYI 359
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 326 FVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 255
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 256 FRQ--RVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 154
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTL 159
+R+G G G+VY + G A+K+++ + + +L + E +L H + L
Sbjct: 30 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 84
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
+ + T +V ++C G +L+ K+ + A + ++YLH I++
Sbjct: 85 FMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDI-ARQTARGMDYLHAKSIIH 143
Query: 220 RDLKPENVLVRDEGHIMLSDFDLS 243
RDLK N+ + ++ + + DF L+
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLA 167
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 328 GTHEYLAPEIIRGEG---HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
G+ ++APE+IR + + D + FGI LYEL+ G P+ NR + +VG+
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 385 FPETPQVSFVA----RDLIRGLLVKEPHKRIAYKRGATEIKQ 422
P+ +V + L+ L K+ +R ++ R EI++
Sbjct: 244 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 326 FVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 255
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 256 FRQ--RVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 154
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 144 EREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFAS 203
E I+G DHP + L K +V E+ G+L S +K + FT
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++YL +G V+RDL N+L+ +SDF LS
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ +PE I SA D W++GI L+E++ +G P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 270
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 22/177 (12%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDK-------ASLASRN- 136
IG S F +LKR +G G G V A+K + + A A R
Sbjct: 17 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYREL 76
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
L++ + I+GLL+ F P S E Y +VME NL + Q + +
Sbjct: 77 VLMKCVNHKNIIGLLN-VFTPQ-KSLEEFQDVY-IVMELMDA-NLCQVIQME----LDHE 128
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLV 253
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+ S +V
Sbjct: 129 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMV 185
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 61/166 (36%), Gaps = 44/166 (26%)
Query: 319 TNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV 378
T+ + FV T Y APE+I G G+ VD W+ G + E++ G F G + V
Sbjct: 180 TSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 239
Query: 379 VGQ------------------------------------PLRFPETPQVSFV----ARDL 398
+ Q + FP + + + ARDL
Sbjct: 240 IEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 299
Query: 399 IRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE 444
+ +LV + KRI+ E QHP+ A PP IP+
Sbjct: 300 LSKMLVIDASKRIS----VDEALQHPYINVWYDPSEAEAPPPKIPD 341
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 326 FVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 254
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 255 FRQ--RVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 153
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 13/160 (8%)
Query: 94 SNFRLLKRLGYGDIGSVYLV-ELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI----- 147
+ + +G G G V+ +L+ + A+K + + + + + T RE+
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALK---RVRVQTGEEGMPLSTIREVAVLRH 67
Query: 148 LGLLDHPFLPTLY---SYFETDKFYCLVMEF-CSGGNLHSLRQKQPNKYFTEDAARFFAS 203
L +HP + L+ + TD+ L + F +L + K P + +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++L L++LH +V+RDLKP+N+LV G I L+DF L+
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 29/128 (22%)
Query: 325 SFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVGQ 381
S V T Y APE++ + + VD W+ G E+ F+G + L +V+G
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 382 PL-----RFPETPQVSF-----------------VARDLIRGLLVKEPHKRIAYKRGATE 419
P R P+ +F + +DL+ L P KRI+ A
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS----AYS 293
Query: 420 IKQHPFFE 427
HP+F+
Sbjct: 294 ALSHPYFQ 301
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 144 EREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFAS 203
E I+G DHP + L K +V E+ G+L S +K + FT
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 152
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++YL +G V+RDL N+L+ +SDF LS
Sbjct: 153 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 192
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ +PE I SA D W++GI L+E++ +G P+ N+ + V + R P
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 268
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 144 EREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFAS 203
E I+G DHP + L K +V E+ G+L S +K + FT
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++YL +G V+RDL N+L+ +SDF LS
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ +PE I SA D W++GI L+E++ +G P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 270
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTL 159
+R+G G G+VY + G A+K+++ + + +L + E +L H + L
Sbjct: 18 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 72
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
+ + T +V ++C G +L+ K+ + A + ++YLH I++
Sbjct: 73 FMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDI-ARQTARGMDYLHAKSIIH 131
Query: 220 RDLKPENVLVRDEGHIMLSDFDLS 243
RDLK N+ + ++ + + DF L+
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLA 155
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 328 GTHEYLAPEIIRGEG---HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
G+ ++APE+IR + + D + FGI LYEL+ G P+ NR + +VG+
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 231
Query: 385 FPETPQVSFVA----RDLIRGLLVKEPHKRIAYKRGATEIKQ 422
P+ +V + L+ L K+ +R ++ R EI++
Sbjct: 232 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 273
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 144 EREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFAS 203
E I+G DHP + L K +V E+ G+L S +K + FT
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++YL +G V+RDL N+L+ +SDF LS
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ +PE I SA D W++GI L+E++ +G P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 270
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 144 EREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFAS 203
E I+G DHP + L K +V E+ G+L S +K + FT
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++YL +G V+RDL N+L+ +SDF LS
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ +PE I SA D W++GI L+E++ +G P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 270
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 70/165 (42%), Gaps = 23/165 (13%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILG 149
+S + L ++G G G V+ R T KV K L K + A E +IL
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKT----GQKVALKKVLMENEKEGFPITALREIKILQ 72
Query: 150 LLDHPFLPTLYSYFETDKF---YC-----LVMEFCS---GGNLHSLRQKQPNKYFTEDAA 198
LL H + L T C LV +FC G L ++ K FT
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-----FTLSEI 127
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ +L L Y+H I++RD+K NVL+ +G + L+DF L+
Sbjct: 128 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 144 EREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFAS 203
E I+G DHP + L K +V E+ G+L S +K + FT
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 125
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++YL +G V+RDL N+L+ +SDF LS
Sbjct: 126 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ +PE I SA D W++GI L+E++ +G P+ N+ + V + R P
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 241
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 7/150 (4%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LGL 150
+ + L +G G G V + T A+K K + +K+++ REI L
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIK---KFLESDDDKMVKKIAMREIKLLKQ 80
Query: 151 LDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
L H L L + K + LV EF L L + PN + ++ +++ +
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDL-ELFPNGLDYQVVQKYLF-QIINGIG 138
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDF 240
+ H I++RD+KPEN+LV G + L DF
Sbjct: 139 FCHSHNIIHRDIKPENILVSQSGVVKLCDF 168
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 63/168 (37%), Gaps = 41/168 (24%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVD 348
IL S+ DFG +A P V V T Y APE++ G+ +G AVD
Sbjct: 155 ILVSQSGVVKLCDFG------FARTLAAPGEVYDDE-VATRWYRAPELLVGDVKYGKAVD 207
Query: 349 WWTFGIFLYELLHGTTPFKGQGNRATLFNV-------------------VGQPLRFPET- 388
W G + E+ G F G + L+++ V +R PE
Sbjct: 208 VWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIK 267
Query: 389 ---------PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
P++S V DL + L +P KR E+ H FF+
Sbjct: 268 EREPLERRYPKLSEVVIDLAKKCLHIDPDKRPF----CAELLHHDFFQ 311
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 16/154 (10%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+ +L K+LG G G V++ +T A+K M S++ L E ++ L H
Sbjct: 16 SLKLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGSMSVEAFL----AEANVMKTLQHD 70
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQ-----KQPNKYFTEDAARFFASEVLLAL 209
L L++ + Y ++ EF + G+L + KQP + F++++ +
Sbjct: 71 KLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLID-----FSAQIAEGM 124
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++ ++RDL+ N+LV ++DF L+
Sbjct: 125 AFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 158
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGN 371
++ APE I D W+FGI L E++ +G P+ G N
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 218
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 13/160 (8%)
Query: 94 SNFRLLKRLGYGDIGSVYLV-ELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI----- 147
+ + +G G G V+ +L+ + A+K + + + + + T RE+
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALK---RVRVQTGEEGMPLSTIREVAVLRH 67
Query: 148 LGLLDHPFLPTLY---SYFETDKFYCLVMEF-CSGGNLHSLRQKQPNKYFTEDAARFFAS 203
L +HP + L+ + TD+ L + F +L + K P + +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++L L++LH +V+RDLKP+N+LV G I L+DF L+
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 29/131 (22%)
Query: 325 SFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVGQ 381
S V T Y APE++ + + VD W+ G E+ F+G + L +V+G
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 382 PL-----RFPETPQVSF-----------------VARDLIRGLLVKEPHKRIAYKRGATE 419
P R P+ +F + +DL+ L P KRI+ A
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS----AYS 293
Query: 420 IKQHPFFEGVN 430
HP+F+ +
Sbjct: 294 ALSHPYFQDLE 304
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 151 LDHPFLPTLYS--YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLA 208
+D PF T Y + E D + C+ + S + + + ED A ++ A
Sbjct: 63 VDCPFTVTFYGALFREGDVWICMELMDTSLDKFYK-QVIDKGQTIPEDILGKIAVSIVKA 121
Query: 209 LEYLH-MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
LE+LH L +++RD+KP NVL+ G + + DF +S
Sbjct: 122 LEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTL 159
+R+G G G+VY + G A+K+++ + + +L + E +L H + L
Sbjct: 30 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 84
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
+ + T +V ++C G +L+ K+ + A + ++YLH I++
Sbjct: 85 FMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDI-ARQTARGMDYLHAKSIIH 143
Query: 220 RDLKPENVLVRDEGHIMLSDFDLS 243
RDLK N+ + ++ + + DF L+
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLA 167
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 328 GTHEYLAPEIIRGEG---HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
G+ ++APE+IR + + D + FGI LYEL+ G P+ NR + +VG+
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 385 FPETPQVSFVA----RDLIRGLLVKEPHKRIAYKRGATEIKQ 422
P+ +V + L+ L K+ +R ++ R EI++
Sbjct: 244 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 326 FVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 255
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 256 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 154
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 326 FVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 254
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 255 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 153
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 326 FVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 255
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 256 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 294
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 154
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTE 144
+G S F +LKR +G G G V + A+K + + ++ RA E
Sbjct: 53 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRE 111
Query: 145 REILGLLDHPFLPTLYSYFETDKF------YCLVMEFCSGGNLHSLRQKQPNKYFTEDAA 198
++ ++H + +L + F K LVME NL + Q + +
Sbjct: 112 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME----LDHERM 166
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 57/141 (40%), Gaps = 44/141 (31%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKG-----QGNRA------- 373
+V T Y APE+I G G+ VD W+ G + E++ F G Q N+
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282
Query: 374 ----------TLFNVV-GQP----LRFPET-PQVSF------------VARDLIRGLLVK 405
T+ N V +P L FP+ P F ARDL+ +LV
Sbjct: 283 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 342
Query: 406 EPHKRIAYKRGATEIKQHPFF 426
+P KRI+ + QHP+
Sbjct: 343 DPAKRIS----VDDALQHPYI 359
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDK-------ASLASRN- 136
IG S F +LKR +G G G V A+K + + A A R
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYREL 74
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
L++ + I+GLL+ F P S E Y +VME NL + Q + +
Sbjct: 75 VLMKCVNHKNIIGLLN-VFTPQ-KSLEEFQDVY-IVMELMDA-NLSQVIQME----LDHE 126
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVS 249
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+ S
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 58/160 (36%), Gaps = 46/160 (28%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF 385
+V T Y APE+I G G+ VD W+ G + E++ G F G + +N V + L
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG-TDHIDQWNKVIEQLGT 243
Query: 386 PET-----------------------------PQVSF------------VARDLIRGLLV 404
P P V F ARDL+ +LV
Sbjct: 244 PSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 405 KEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE 444
+ KRI+ E QHP+ A PP IP+
Sbjct: 304 IDASKRIS----VDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 326 FVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVF 254
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 255 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 153
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 25/164 (15%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
+ F++ + G G G+V L + + T A+K + + RN+ L+ + L +L
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQD---LAVLH 77
Query: 153 HPFLPTLYSYFET-------DKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAA------R 199
HP + L SYF T D + +VME+ LH + Y+ A +
Sbjct: 78 HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLH----RCCRNYYRRQVAPPPILIK 132
Query: 200 FFASEVLLALEYLHM--LGIVYRDLKPENVLVRD-EGHIMLSDF 240
F +++ ++ LH+ + + +RD+KP NVLV + +G + L DF
Sbjct: 133 VFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDF 176
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTT 364
C G+ +L NV +++ + Y APE+I G H +AVD W+ G E++ G
Sbjct: 174 CDFGSAKKLSPSEPNV---AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEP 230
Query: 365 PFKGQGNRATLFNVV 379
F+G + L +V
Sbjct: 231 IFRGDNSAGQLHEIV 245
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTE 144
+G S F +LKR +G G G V + A+K + + ++ RA E
Sbjct: 8 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRE 66
Query: 145 REILGLLDHPFLPTLYSYFETDKF------YCLVMEFCSGGNLHSLRQKQPNKYFTEDAA 198
++ ++H + +L + F K LVME NL + Q + +
Sbjct: 67 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLXQVIQME----LDHERM 121
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 122 SYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 166
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 57/141 (40%), Gaps = 44/141 (31%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKG-----QGNRA------- 373
+V T Y APE+I G G+ VD W+ G + E++ F G Q N+
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237
Query: 374 ----------TLFNVV-GQP----LRFPET-PQVSF------------VARDLIRGLLVK 405
T+ N V +P L FP+ P F ARDL+ +LV
Sbjct: 238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 297
Query: 406 EPHKRIAYKRGATEIKQHPFF 426
+P KRI+ + QHP+
Sbjct: 298 DPAKRIS----VDDALQHPYI 314
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDK-------ASLASRN- 136
IG S F +LKR +G G G V A+K + + A A R
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYREL 74
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
L++ + I+GLL+ F P S E Y +VME NL + Q + +
Sbjct: 75 VLMKVVNHKNIIGLLN-VFTPQ-KSLEEFQDVY-IVMELMDA-NLSQVIQME----LDHE 126
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVS 249
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+ S
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 58/160 (36%), Gaps = 46/160 (28%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF 385
+V T Y APE+I G G+ VD W+ G + E++ G F G + +N V + L
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG-TDHIDQWNKVIEQLGT 243
Query: 386 PET-----------------------------PQVSF------------VARDLIRGLLV 404
P P V F ARDL+ +LV
Sbjct: 244 PSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 405 KEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE 444
+ KRI+ E QHP+ A PP IP+
Sbjct: 304 IDASKRIS----VDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTE 144
+G S F +LKR +G G G V + A+K + + ++ RA E
Sbjct: 14 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRE 72
Query: 145 REILGLLDHPFLPTLYSYFETDKF------YCLVMEFCSGGNLHSLRQKQPNKYFTEDAA 198
++ ++H + +L + F K LVME NL + Q + +
Sbjct: 73 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME----LDHERM 127
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 128 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 172
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 57/141 (40%), Gaps = 44/141 (31%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKG-----QGNRA------- 373
+V T Y APE+I G G+ VD W+ G + E++ F G Q N+
Sbjct: 184 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 243
Query: 374 ----------TLFNVV-GQP----LRFPET-PQVSF------------VARDLIRGLLVK 405
T+ N V +P L FP+ P F ARDL+ +LV
Sbjct: 244 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 303
Query: 406 EPHKRIAYKRGATEIKQHPFF 426
+P KRI+ + QHP+
Sbjct: 304 DPAKRIS----VDDALQHPYI 320
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTE 144
+G S F +LKR +G G G V + A+K + + ++ RA E
Sbjct: 15 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRE 73
Query: 145 REILGLLDHPFLPTLYSYFETDKF------YCLVMEFCSGGNLHSLRQKQPNKYFTEDAA 198
++ ++H + +L + F K LVME NL + Q + +
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME----LDHERM 128
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 57/141 (40%), Gaps = 44/141 (31%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKG-----QGNRA------- 373
+V T Y APE+I G G+ VD W+ G + E++ F G Q N+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 374 ----------TLFNVV-GQP----LRFPET-PQVSF------------VARDLIRGLLVK 405
T+ N V +P L FP+ P F ARDL+ +LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 406 EPHKRIAYKRGATEIKQHPFF 426
+P KRI+ + QHP+
Sbjct: 305 DPAKRIS----VDDALQHPYI 321
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTE 144
+G S F +LKR +G G G V + A+K + + ++ RA E
Sbjct: 15 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRE 73
Query: 145 REILGLLDHPFLPTLYSYFETDKF------YCLVMEFCSGGNLHSLRQKQPNKYFTEDAA 198
++ ++H + +L + F K LVME NL + Q + +
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLXQVIQME----LDHERM 128
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 129 SYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 57/141 (40%), Gaps = 44/141 (31%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKG-----QGNRA------- 373
+V T Y APE+I G G+ VD W+ G + E++ F G Q N+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 374 ----------TLFNVV-GQP----LRFPET-PQVSF------------VARDLIRGLLVK 405
T+ N V +P L FP+ P F ARDL+ +LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 406 EPHKRIAYKRGATEIKQHPFF 426
+P KRI+ + QHP+
Sbjct: 305 DPAKRIS----VDDALQHPYI 321
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL--LRAQTEREILGL 150
+S + L ++G G G V+ R T A+K K + + + + A E +IL L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITALREIKILQL 73
Query: 151 LDHPFLPTLYS--------YFETDKFYCLVMEFCS---GGNLHSLRQKQPNKYFTEDAAR 199
L H + L Y LV +FC G L ++ K FT +
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK-----FTLSEIK 128
Query: 200 FFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+L L Y+H I++RD+K NVL+ +G + L+DF L+
Sbjct: 129 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTE 144
+G S F +LKR +G G G V + A+K + + ++ RA E
Sbjct: 9 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRE 67
Query: 145 REILGLLDHPFLPTLYSYFETDKF------YCLVMEFCSGGNLHSLRQKQPNKYFTEDAA 198
++ ++H + +L + F K LVME NL + Q + +
Sbjct: 68 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME----LDHERM 122
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 57/141 (40%), Gaps = 44/141 (31%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKG-----QGNRA------- 373
+V T Y APE+I G G+ VD W+ G + E++ F G Q N+
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238
Query: 374 ----------TLFNVV-GQP----LRFPET-PQVSF------------VARDLIRGLLVK 405
T+ N V +P L FP+ P F ARDL+ +LV
Sbjct: 239 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 298
Query: 406 EPHKRIAYKRGATEIKQHPFF 426
+P KRI+ + QHP+
Sbjct: 299 DPAKRIS----VDDALQHPYI 315
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 16/154 (10%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+ +L K+LG G G V++ +T A+K M S++ L E ++ L H
Sbjct: 183 SLKLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGSMSVEAFL----AEANVMKTLQHD 237
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQ-----KQPNKYFTEDAARFFASEVLLAL 209
L L++ + Y ++ EF + G+L + KQP + F++++ +
Sbjct: 238 KLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLID-----FSAQIAEGM 291
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++ ++RDL+ N+LV ++DF L+
Sbjct: 292 AFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 325
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGN 371
++ APE I D W+FGI L E++ +G P+ G N
Sbjct: 334 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 375
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTE 144
+G S F +LKR +G G G V + A+K + + ++ RA E
Sbjct: 16 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRE 74
Query: 145 REILGLLDHPFLPTLYSYFETDKF------YCLVMEFCSGGNLHSLRQKQPNKYFTEDAA 198
++ ++H + +L + F K LVME NL + Q + +
Sbjct: 75 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME----LDHERM 129
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 130 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 57/141 (40%), Gaps = 44/141 (31%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKG-----QGNRA------- 373
+V T Y APE+I G G+ VD W+ G + E++ F G Q N+
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245
Query: 374 ----------TLFNVV-GQP----LRFPET-PQVSF------------VARDLIRGLLVK 405
T+ N V +P L FP+ P F ARDL+ +LV
Sbjct: 246 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 305
Query: 406 EPHKRIAYKRGATEIKQHPFF 426
+P KRI+ + QHP+
Sbjct: 306 DPAKRIS----VDDALQHPYI 322
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 66/164 (40%), Gaps = 8/164 (4%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELR---GTNTYFAMKVMDKA-SLASRNKLLRAQTEREILG 149
S ++ + +G G+ G V L+ + A+K + + R L E I+G
Sbjct: 43 SCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFL---CEASIMG 99
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLAL 209
DHP + L K +V+EF G L + +K + FT + +
Sbjct: 100 QFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ-FTVIQLVGMLRGIAAGM 158
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLV 253
YL +G V+RDL N+LV +SDF LS P V
Sbjct: 159 RYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAV 202
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ APE I+ SA D W++GI ++E++ +G P+ N+ + + + R P
Sbjct: 214 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVIKAIEEGYRLP 268
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 16/154 (10%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+ +L K+LG G G V++ +T A+K M S++ L A ++ L H
Sbjct: 189 SLKLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGSMSVEAFLAEAN----VMKTLQHD 243
Query: 155 FLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQ-----KQPNKYFTEDAARFFASEVLLAL 209
L L++ + Y ++ EF + G+L + KQP + F++++ +
Sbjct: 244 KLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLID-----FSAQIAEGM 297
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++ ++RDL+ N+LV ++DF L+
Sbjct: 298 AFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 331
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGN 371
++ APE I D W+FGI L E++ +G P+ G N
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 391
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTE 144
+G S F +LKR +G G G V + A+K + + ++ RA E
Sbjct: 15 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRE 73
Query: 145 REILGLLDHPFLPTLYSYFETDKF------YCLVMEFCSGGNLHSLRQKQPNKYFTEDAA 198
++ ++H + +L + F K LVME NL + Q + +
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME----LDHERM 128
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 57/141 (40%), Gaps = 44/141 (31%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKG-----QGNRA------- 373
+V T Y APE+I G G+ VD W+ G + E++ F G Q N+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 374 ----------TLFNVV-GQP----LRFPET-PQVSF------------VARDLIRGLLVK 405
T+ N V +P L FP+ P F ARDL+ +LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 406 EPHKRIAYKRGATEIKQHPFF 426
+P KRI+ + QHP+
Sbjct: 305 DPAKRIS----VDDALQHPYI 321
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 18/171 (10%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTE 144
+G S F +LKR +G G G V + A+K + + ++ RA E
Sbjct: 15 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRE 73
Query: 145 REILGLLDHPFLPTLYSYFETDKF------YCLVMEFCSGGNLHSLRQKQPNKYFTEDAA 198
++ ++H + +L + F K LVME NL + Q + +
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLXQVIQME----LDHERM 128
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVS 249
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+ S
Sbjct: 129 SYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 57/141 (40%), Gaps = 44/141 (31%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKG-----QGNRA------- 373
+V T Y APE+I G G+ VD W+ G + E++ F G Q N+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 374 ----------TLFNVV-GQP----LRFPET-PQVSF------------VARDLIRGLLVK 405
T+ N V +P L FP+ P F ARDL+ +LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 406 EPHKRIAYKRGATEIKQHPFF 426
+P KRI+ + QHP+
Sbjct: 305 DPAKRIS----VDDALQHPYI 321
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTE 144
+G S F +LKR +G G G V + A+K + + ++ RA E
Sbjct: 8 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRE 66
Query: 145 REILGLLDHPFLPTLYSYFETDKF------YCLVMEFCSGGNLHSLRQKQPNKYFTEDAA 198
++ ++H + +L + F K LVME NL + Q + +
Sbjct: 67 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME----LDHERM 121
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 122 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 57/141 (40%), Gaps = 44/141 (31%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKG-----QGNRA------- 373
+V T Y APE+I G G+ VD W+ G + E++ F G Q N+
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237
Query: 374 ----------TLFNVV-GQP----LRFPET-PQVSF------------VARDLIRGLLVK 405
T+ N V +P L FP+ P F ARDL+ +LV
Sbjct: 238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 297
Query: 406 EPHKRIAYKRGATEIKQHPFF 426
+P KRI+ + QHP+
Sbjct: 298 DPAKRIS----VDDALQHPYI 314
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTE 144
+G S F +LKR +G G G V + A+K + + ++ RA E
Sbjct: 16 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRE 74
Query: 145 REILGLLDHPFLPTLYSYFETDKF------YCLVMEFCSGGNLHSLRQKQPNKYFTEDAA 198
++ ++H + +L + F K LVME NL + Q + +
Sbjct: 75 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME----LDHERM 129
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 130 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 57/141 (40%), Gaps = 44/141 (31%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKG-----QGNRA------- 373
+V T Y APE+I G G+ VD W+ G + E++ F G Q N+
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245
Query: 374 ----------TLFNVV-GQP----LRFPET-PQVSF------------VARDLIRGLLVK 405
T+ N V +P L FP+ P F ARDL+ +LV
Sbjct: 246 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 305
Query: 406 EPHKRIAYKRGATEIKQHPFF 426
+P KRI+ + QHP+
Sbjct: 306 DPAKRIS----VDDALQHPYI 322
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTE 144
+G S F +LKR +G G G V + A+K + + ++ RA E
Sbjct: 9 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRE 67
Query: 145 REILGLLDHPFLPTLYSYFETDKF------YCLVMEFCSGGNLHSLRQKQPNKYFTEDAA 198
++ ++H + +L + F K LVME NL + Q + +
Sbjct: 68 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME----LDHERM 122
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 57/141 (40%), Gaps = 44/141 (31%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKG-----QGNRA------- 373
+V T Y APE+I G G+ VD W+ G + E++ F G Q N+
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238
Query: 374 ----------TLFNVV-GQP----LRFPET-PQVSF------------VARDLIRGLLVK 405
T+ N V +P L FP+ P F ARDL+ +LV
Sbjct: 239 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 298
Query: 406 EPHKRIAYKRGATEIKQHPFF 426
+P KRI+ + QHP+
Sbjct: 299 DPAKRIS----VDDALQHPYI 315
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL--LRAQTEREILGL 150
+S + L ++G G G V+ R T A+K K + + + + A E +IL L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITALREIKILQL 73
Query: 151 LDHPFLPTLYSYFETDKF---YC-----LVMEFCS---GGNLHSLRQKQPNKYFTEDAAR 199
L H + L T C LV +FC G L ++ K FT +
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-----FTLSEIK 128
Query: 200 FFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+L L Y+H I++RD+K NVL+ +G + L+DF L+
Sbjct: 129 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++F +LL L LH G+V+RDL P N+L+ D I + DF+L+
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 26/149 (17%)
Query: 270 ILNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGT 329
+L++ VH + P IL + N + DF L E T + + T
Sbjct: 149 VLHEAGVVHRDLHPGN----ILLADNNDITICDFN---------LAREDTADANKTHYVT 195
Query: 330 HE-YLAPEII-RGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
H Y APE++ + +G VD W+ G + E+ + F+G +T +N + + +
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG----STFYNQLNKIVEVVG 251
Query: 388 TPQVSFV-------ARDLIRGLLVKEPHK 409
TP++ V ARD +R L P +
Sbjct: 252 TPKIEDVVMFSSPSARDYLRNSLSNVPAR 280
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 25/168 (14%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL-- 150
L++F ++ LG G G V+ + + + +A+K + L +R +L R + RE+ L
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIK---RIRLPNR-ELAREKVMREVKALAK 59
Query: 151 LDHPFLPTLY-SYFETD----------KFYCLV-MEFCSGGNLHSLRQKQPNKYFTEDAA 198
L+HP + + ++ E + K Y + M+ C NL + E+
Sbjct: 60 LEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMN---GRCTIEERE 116
Query: 199 RFFASEVLL----ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL 242
R + L A+E+LH G+++RDLKP N+ + + + DF L
Sbjct: 117 RSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 164
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 318 PTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRA-TLF 376
P R VGT Y++PE I G + VD ++ G+ L+ELL+ PF Q R TL
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLT 238
Query: 377 NVVGQPLRFP 386
+V + L+FP
Sbjct: 239 DV--RNLKFP 246
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++F +LL L LH G+V+RDL P N+L+ D I + DF+L+
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 26/149 (17%)
Query: 270 ILNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGT 329
+L++ VH + P IL + N + DF L E T + + T
Sbjct: 149 VLHEAGVVHRDLHPGN----ILLADNNDITICDFN---------LAREDTADANKTHYVT 195
Query: 330 HE-YLAPEII-RGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFPE 387
H Y APE++ + +G VD W+ G + E+ + F+G +T +N + + +
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG----STFYNQLNKIVEVVG 251
Query: 388 TPQVSFV-------ARDLIRGLLVKEPHK 409
TP++ V ARD +R L P +
Sbjct: 252 TPKIEDVVMFSSPSARDYLRNSLSNVPAR 280
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 93 LSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL--LRAQTEREILGL 150
+S + L ++G G G V+ R T A+K K + + + + A E +IL L
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK---KVLMENEKEGFPITALREIKILQL 72
Query: 151 LDHPFLPTLYSYFETDKF---YC-----LVMEFCS---GGNLHSLRQKQPNKYFTEDAAR 199
L H + L T C LV +FC G L ++ K FT +
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-----FTLSEIK 127
Query: 200 FFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+L L Y+H I++RD+K NVL+ +G + L+DF L+
Sbjct: 128 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 171
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 144 EREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFAS 203
E I+G DHP + L K +V E+ G+L S +K + FT
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++YL +G V+RDL N+L+ +SDF L+
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLA 194
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ +PE I SA D W++GI L+E++ +G P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 270
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTE 144
+G S F +LKR +G G G V + A+K + + ++ RA E
Sbjct: 15 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRE 73
Query: 145 REILGLLDHPFLPTLYSYFETDKFY------CLVMEFCSGGNLHSLRQKQPNKYFTEDAA 198
++ ++H + +L + F K LVME NL + Q + +
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLXQVIQME----LDHERM 128
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 57/141 (40%), Gaps = 44/141 (31%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKG-----QGNRA------- 373
+V T Y APE+I G G+ VD W+ G + E++ F G Q N+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 374 ----------TLFNVV-GQP----LRFPET-PQVSF------------VARDLIRGLLVK 405
T+ N V +P L FP+ P F ARDL+ +LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 406 EPHKRIAYKRGATEIKQHPFF 426
+P KRI+ + QHP+
Sbjct: 305 DPAKRIS----VDDALQHPYI 321
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 27/155 (17%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMK-VMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K +G G G VY +L + A+K V+ + +R E +I+ LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKLDHCNIVR 77
Query: 159 LYSYF-----ETDKFYC-LVMEFCSGGNL----HSLRQKQ--PNKYFTEDAARFFASEVL 206
L +F + D+ Y LV+++ H R KQ P Y + + ++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY-----VKLYMYQLF 132
Query: 207 LALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
+L Y+H GI +RD+KP+N+L+ D + L DF
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTT 364
C G+ +L+ NV S + + Y APE+I G + S++D W+ G L ELL G
Sbjct: 165 CDFGSAKQLVRGEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
Query: 365 PFKGQG---NRATLFNVVGQPLR 384
F G + V+G P R
Sbjct: 222 IFPGDSGVDQLVEIIKVLGTPTR 244
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 22/167 (13%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDK-------ASLASRN- 136
IG S F +LKR +G G G V A+K + + A A R
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYREL 74
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
L++ + I+GLL+ F P S E Y +VME NL + Q + +
Sbjct: 75 VLMKCVNHKNIIGLLN-VFTPQ-KSLEEFQDVY-IVMELMDA-NLSQVIQME----LDHE 126
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 58/160 (36%), Gaps = 46/160 (28%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF 385
+V T Y APE+I G G+ VD W+ G + E++ G F G + +N V + L
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT-DHIDQWNKVIEQLGT 243
Query: 386 PET-----------------------------PQVSF------------VARDLIRGLLV 404
P P V F ARDL+ +LV
Sbjct: 244 PSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 405 KEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE 444
+ KRI+ E QHP+ A PP IP+
Sbjct: 304 IDASKRIS----VDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 22/167 (13%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDK-------ASLASRN- 136
IG S F +LKR +G G G V A+K + + A A R
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYREL 74
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
L++ + I+GLL+ F P S E Y +VME NL + Q + +
Sbjct: 75 VLMKCVNHKNIIGLLN-VFTPQ-KSLEEFQDVY-IVMELMDA-NLCQVIQME----LDHE 126
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 57/158 (36%), Gaps = 44/158 (27%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ----- 381
V T Y APE+I G G+ VD W+ G + E++ G F G + V+ Q
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245
Query: 382 -------------------------------PLRFPETPQVSFV----ARDLIRGLLVKE 406
+ FP + + + ARDL+ +LV +
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVID 305
Query: 407 PHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE 444
KRI+ E QHP+ A PP IP+
Sbjct: 306 ASKRIS----VDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 325 SFVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPL 383
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++G +
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQV 221
Query: 384 RFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 222 FFRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 261
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 121
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 155
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 22/167 (13%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDK-------ASLASRN- 136
IG S F +LKR +G G G V A+K + + A A R
Sbjct: 16 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYREL 75
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
L++ + I+GLL+ F P S E Y +VME NL + Q + +
Sbjct: 76 VLMKCVNHKNIIGLLN-VFTPQ-KSLEEFQDVY-IVMELMDA-NLCQVIQME----LDHE 127
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 128 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 58/159 (36%), Gaps = 44/159 (27%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ---- 381
+V T Y APE+I G G+ VD W+ G + E++ G F G + V+ Q
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 245
Query: 382 --------------------------------PLRFPETPQVSFV----ARDLIRGLLVK 405
+ FP + + + ARDL+ +LV
Sbjct: 246 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 305
Query: 406 EPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE 444
+ KRI+ E QHP+ A PP IP+
Sbjct: 306 DASKRIS----VDEALQHPYINVWYDPSEAEAPPPKIPD 340
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 22/167 (13%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDK-------ASLASRN- 136
IG S F +LKR +G G G V A+K + + A A R
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYREL 74
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
L++ + I+GLL+ F P S E Y +VME NL + Q + +
Sbjct: 75 VLMKCVNHKNIIGLLN-VFTPQ-KSLEEFQDVY-IVMELMDA-NLCQVIQME----LDHE 126
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 58/159 (36%), Gaps = 44/159 (27%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ---- 381
+V T Y APE+I G G+ VD W+ G + E++ G F G + V+ Q
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 382 --------------------------------PLRFPETPQVSFV----ARDLIRGLLVK 405
+ FP + + + ARDL+ +LV
Sbjct: 245 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 406 EPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE 444
+ KRI+ E QHP+ A PP IP+
Sbjct: 305 DASKRIS----VDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 144 EREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFAS 203
E I+G DHP + L K +V E+ G+L + +K + FT
Sbjct: 73 EASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ-FTVIQLVGMLR 131
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++YL +G V+RDL N+L+ +SDF LS
Sbjct: 132 GISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 171
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Query: 144 EREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFAS 203
E I+G DHP + L K +V E G+L S +K + FT
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++YL +G V+RDL N+L+ +SDF LS
Sbjct: 155 GIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ +PE I SA D W++GI L+E++ +G P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 270
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Query: 144 EREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFAS 203
E I+G DHP + L K +V E+ G+L S +K + FT
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL 242
+ ++YL +G V+RDL N+L+ +SDF L
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ +PE I SA D W++GI L+E++ +G P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 270
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 22/167 (13%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDK-------ASLASRN- 136
IG S F +LKR +G G G V A+K + + A A R
Sbjct: 20 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYREL 79
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
L++ + I+GLL+ F P S E Y +VME NL + Q + +
Sbjct: 80 VLMKCVNHKNIIGLLN-VFTPQ-KSLEEFQDVY-IVMELMDA-NLCQVIQME----LDHE 131
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 132 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 178
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 57/159 (35%), Gaps = 44/159 (27%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ---- 381
+V T Y APE+I G G+ VD W+ G + E++ F G+ V+ Q
Sbjct: 190 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP 249
Query: 382 --------------------------------PLRFPETPQVSFV----ARDLIRGLLVK 405
+ FP + + + ARDL+ +LV
Sbjct: 250 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 309
Query: 406 EPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE 444
+ KRI+ E QHP+ A PP IP+
Sbjct: 310 DASKRIS----VDEALQHPYINVWYDPSEAEAPPPKIPD 344
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 22/167 (13%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDK-------ASLASRN- 136
IG S F +LKR +G G G V A+K + + A A R
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYREL 74
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
L++ + I+GLL+ F P S E Y +VME NL + Q + +
Sbjct: 75 VLMKCVNHKNIIGLLN-VFTPQ-KSLEEFQDVY-IVMELMDA-NLCQVIQME----LDHE 126
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 58/160 (36%), Gaps = 46/160 (28%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRF 385
+V T Y APE+I G G+ VD W+ G + E++ G F G + +N V + L
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG-TDHIDQWNKVIEQLGT 243
Query: 386 PET-----------------------------PQVSF------------VARDLIRGLLV 404
P P V F ARDL+ +LV
Sbjct: 244 PSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303
Query: 405 KEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE 444
+ KRI+ E QHP+ A PP IP+
Sbjct: 304 IDASKRIS----VDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 95 NFRLLKRLGYGDIGSVYLVELR----GTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ + L++LG G+ GSV + T A+K K ++ L + E EIL
Sbjct: 12 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 68
Query: 151 LDHPFLPTL--YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF--FASEVL 206
L H + Y + L+ME+ G+L QK + D + + S++
Sbjct: 69 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI---DHIKLLQYTSQIC 125
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++R+L N+LV +E + + DF L+
Sbjct: 126 KGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLT 162
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+ APE + A D W+FG+ LYEL
Sbjct: 184 WYAPESLTESKFSVASDVWSFGVVLYELF 212
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 22/167 (13%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDK-------ASLASRN- 136
IG S F +LKR +G G G V A+K + + A A R
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYREL 74
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
L++ + I+GLL+ F P S E Y +VME NL + Q + +
Sbjct: 75 VLMKCVNHKNIIGLLN-VFTPQ-KSLEEFQDVY-IVMELMDA-NLCQVIQME----LDHE 126
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 58/158 (36%), Gaps = 44/158 (27%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKG-----QGNRA-------- 373
V T Y APE+I G G+ VD W+ G + E++ F G Q N+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 374 ---------TLFNVVGQPLRFPET------PQVSF------------VARDLIRGLLVKE 406
T+ N V ++ P V F ARDL+ +LV +
Sbjct: 246 PAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 407 PHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE 444
KRI+ E QHP+ A PP IP+
Sbjct: 306 ASKRIS----VDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 95 NFRLLKRLGYGDIGSVYLVELR----GTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+ + L++LG G+ GSV + T A+K K ++ L + E EIL
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFEREIEILKS 70
Query: 151 LDHPFLPTL--YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARF--FASEVL 206
L H + Y + L+ME+ G+L Q + D + + S++
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERI---DHIKLLQYTSQIC 127
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL N+LV +E + + DF L+
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
IL +NR DFG + LP+ E V+ Y APE + A D
Sbjct: 148 ILVENENRVKIGDFG--LTKVLPQ-DKEXXKVKEPGESPIFWY-APESLTESKFSVASDV 203
Query: 350 WTFGIFLYELL 360
W+FG+ LYEL
Sbjct: 204 WSFGVVLYELF 214
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 22/167 (13%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDK-------ASLASRN- 136
IG S F +LKR +G G G V A+K + + A A R
Sbjct: 15 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYREL 74
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
L++ + I+GLL+ F P S E Y +VME NL + Q + +
Sbjct: 75 VLMKCVNHKNIIGLLN-VFTPQ-KSLEEFQDVY-IVMELMDA-NLCQVIQME----LDHE 126
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 56/158 (35%), Gaps = 44/158 (27%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ----- 381
V T Y APE+I G G+ VD W+ G + E++ F G+ V+ Q
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 382 -------------------------------PLRFPETPQVSFV----ARDLIRGLLVKE 406
+ FP + + + ARDL+ +LV +
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 407 PHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE 444
KRI+ E QHP+ A PP IP+
Sbjct: 306 ASKRIS----VDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 22/167 (13%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDK-------ASLASRN- 136
IG S F +LKR +G G G V A+K + + A A R
Sbjct: 9 IGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYREL 68
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
L++ + I+GLL+ F P S E Y +VME NL + Q + +
Sbjct: 69 VLMKCVNHKNIIGLLN-VFTPQ-KSLEEFQDVY-IVMELMDA-NLCQVIQME----LDHE 120
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 121 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 57/159 (35%), Gaps = 44/159 (27%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ---- 381
+V T Y APE+I G G+ VD W+ G + E++ F G+ V+ Q
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP 238
Query: 382 --------------------------------PLRFPETPQVSFV----ARDLIRGLLVK 405
+ FP + + + ARDL+ +LV
Sbjct: 239 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 298
Query: 406 EPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE 444
+ KRI+ E QHP+ A PP IP+
Sbjct: 299 DASKRIS----VDEALQHPYINVWYDPSEAEAPPPKIPD 333
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Query: 144 EREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFAS 203
E I+G DHP + L K +V E G+L S +K + FT
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTVIQLVGMLR 125
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++YL +G V+RDL N+L+ +SDF LS
Sbjct: 126 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ +PE I SA D W++GI L+E++ +G P+ N+ + V + R P
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 241
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 122 FAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL 181
F + + +L LLR + E I+G+ D PT+ E K LV G +L
Sbjct: 79 FEHQTYCQRTLREIKILLRFRHE-NIIGINDIIRAPTI----EQMKDVYLVTHLM-GADL 132
Query: 182 HSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFD 241
+ L + Q + + D +F ++L L+Y+H +++RDLKP N+L+ + + DF
Sbjct: 133 YKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFG 189
Query: 242 LS 243
L+
Sbjct: 190 LA 191
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 34/133 (25%)
Query: 325 SFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVG 380
+V T Y APEI + +G+ ++D W+ G L E+L F G+ L ++G
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 265
Query: 381 QP-----------------LRFPET---------PQVSFVARDLIRGLLVKEPHKRIAYK 414
P L P P A DL+ +L PHKRI +
Sbjct: 266 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 325
Query: 415 RGATEIKQHPFFE 427
+ HP+ E
Sbjct: 326 QALA----HPYLE 334
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 91 IGLSNFRLLKR------LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTE 144
+G S F +LKR +G G G V + A+K + + ++ RA E
Sbjct: 15 VGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRE 73
Query: 145 REILGLLDHPFLPTLYSYFETDKF------YCLVMEFCSGGNLHSLRQKQPNKYFTEDAA 198
++ ++H + +L + F K LVME NL + Q + +
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME----LDHERM 128
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++L +++LH GI++RDLKP N++V+ + + + DF L+
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 57/141 (40%), Gaps = 44/141 (31%)
Query: 326 FVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKG-----QGNRA------- 373
+V T Y APE+I G G+ VD W+ G + E++ F G Q N+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 374 ----------TLFNVV-GQP----LRFPET-PQVSF------------VARDLIRGLLVK 405
T+ N V +P L FP+ P F ARDL+ +LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 406 EPHKRIAYKRGATEIKQHPFF 426
+P KRI+ + QHP+
Sbjct: 305 DPAKRIS----VDDALQHPYI 321
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Query: 144 EREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFAS 203
E I+G DHP + L K +V E G+L S +K + FT
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTVIQLVGMLR 154
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ ++YL +G V+RDL N+L+ +SDF LS
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ +PE I SA D W++GI L+E++ +G P+ N+ + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLP 270
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 20/139 (14%)
Query: 100 KRLGYGDIGSV-YLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K LGYG G+V + +G ++D +A L +++ DHP +
Sbjct: 39 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-------DHPNVIR 91
Query: 159 LYSYFETDKFYCLVMEFCS--------GGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
Y TD+F + +E C+ N+ K +Y R AS V
Sbjct: 92 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV----A 147
Query: 211 YLHMLGIVYRDLKPENVLV 229
+LH L I++RDLKP+N+LV
Sbjct: 148 HLHSLKIIHRDLKPQNILV 166
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 20/139 (14%)
Query: 100 KRLGYGDIGSV-YLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K LGYG G+V + +G ++D +A L +++ DHP +
Sbjct: 39 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-------DHPNVIR 91
Query: 159 LYSYFETDKFYCLVMEFCS--------GGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
Y TD+F + +E C+ N+ K +Y R AS V
Sbjct: 92 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV----A 147
Query: 211 YLHMLGIVYRDLKPENVLV 229
+LH L I++RDLKP+N+LV
Sbjct: 148 HLHSLKIIHRDLKPQNILV 166
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 141
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 326 FVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 242
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 243 FRQ--RVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 281
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMK-VMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K +G G G VY +L + A+K V+ +R E +I+ LDH +
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 113
Query: 159 LYSYF-----ETDKFYC-LVMEFCSGG----NLHSLRQKQ--PNKYFTEDAARFFASEVL 206
L +F + D+ Y LV+++ H R KQ P Y + + ++
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLF 168
Query: 207 LALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
+L Y+H GI +RD+KP+N+L+ D + L DF
Sbjct: 169 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 203
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTT 364
C G+ +L+ NV S++ + Y APE+I G + S++D W+ G L ELL G
Sbjct: 201 CDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 257
Query: 365 PFKGQG---NRATLFNVVGQPLR 384
F G + V+G P R
Sbjct: 258 IFPGDSGVDQLVEIIKVLGTPTR 280
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMK-VMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K +G G G VY +L + A+K V+ +R E +I+ LDH +
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 111
Query: 159 LYSYF-----ETDKFYC-LVMEFCSGG----NLHSLRQKQ--PNKYFTEDAARFFASEVL 206
L +F + D+ Y LV+++ H R KQ P Y + + ++
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLF 166
Query: 207 LALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
+L Y+H GI +RD+KP+N+L+ D + L DF
Sbjct: 167 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 201
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTT 364
C G+ +L+ NV S + + Y APE+I G + S++D W+ G L ELL G
Sbjct: 199 CDFGSAKQLVRGEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 255
Query: 365 PFKGQG---NRATLFNVVGQPLR 384
F G + V+G P R
Sbjct: 256 IFPGDSGVDQLVEIIKVLGTPTR 278
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 170 CLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLV 229
LV E+ + + KQ + T+ RF+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 111 ALVFEYINNTDF-----KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 165
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMK-VMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K +G G G VY +L + A+K V+ +R E +I+ LDH +
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 105
Query: 159 LYSYF-----ETDKFYC-LVMEFCSGG----NLHSLRQKQ--PNKYFTEDAARFFASEVL 206
L +F + D+ Y LV+++ H R KQ P Y + + ++
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLF 160
Query: 207 LALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
+L Y+H GI +RD+KP+N+L+ D + L DF
Sbjct: 161 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 195
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTT 364
C G+ +L+ NV S++ + Y APE+I G + S++D W+ G L ELL G
Sbjct: 193 CDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 249
Query: 365 PFKGQG---NRATLFNVVGQPLR 384
F G + V+G P R
Sbjct: 250 IFPGDSGVDQLVEIIKVLGTPTR 272
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 141
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 326 FVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 242
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 243 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 281
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMK-VMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K +G G G VY +L + A+K V+ +R E +I+ LDH +
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 115
Query: 159 LYSYF-----ETDKFYC-LVMEFCSGG----NLHSLRQKQ--PNKYFTEDAARFFASEVL 206
L +F + D+ Y LV+++ H R KQ P Y + + ++
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLF 170
Query: 207 LALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
+L Y+H GI +RD+KP+N+L+ D + L DF
Sbjct: 171 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 205
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTT 364
C G+ +L+ NV S++ + Y APE+I G + S++D W+ G L ELL G
Sbjct: 203 CDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 259
Query: 365 PFKGQG---NRATLFNVVGQPLR 384
F G + V+G P R
Sbjct: 260 IFPGDSGVDQLVEIIKVLGTPTR 282
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITER--GALQEELARSFFWQVLE 125
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 159
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 326 FVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 226
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 227 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 265
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 170 CLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLV 229
LV E+ + + KQ + T+ RF+ E+L AL+Y H GI++RD+KP NV++
Sbjct: 116 ALVFEYINNTDF-----KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 170
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMK-VMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K +G G G VY +L + A+K V+ +R E +I+ LDH +
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 111
Query: 159 LYSYF-----ETDKFYC-LVMEFCSGG----NLHSLRQKQ--PNKYFTEDAARFFASEVL 206
L +F + D+ Y LV+++ H R KQ P Y + + ++
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLF 166
Query: 207 LALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
+L Y+H GI +RD+KP+N+L+ D + L DF
Sbjct: 167 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 201
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTT 364
C G+ +L+ NV S++ + Y APE+I G + S++D W+ G L ELL G
Sbjct: 199 CDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 255
Query: 365 PFKGQG---NRATLFNVVGQPLR 384
F G + V+G P R
Sbjct: 256 IFPGDSGVDQLVEIIKVLGTPTR 278
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 102
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 103 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 160
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 161 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 194
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 326 FVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 208 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 261
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 262 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 300
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 20/139 (14%)
Query: 100 KRLGYGDIGSVYLV-ELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K LGYG G+V +G ++D +A L +++ DHP +
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-------DHPNVIR 73
Query: 159 LYSYFETDKFYCLVMEFCS--------GGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
Y TD+F + +E C+ N+ K +Y R AS V
Sbjct: 74 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV----A 129
Query: 211 YLHMLGIVYRDLKPENVLV 229
+LH L I++RDLKP+N+LV
Sbjct: 130 HLHSLKIIHRDLKPQNILV 148
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 140
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 174
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 326 FVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 241
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 242 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 280
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 133 ASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKY 192
A +++LL E ++ LD+P++ + E + + LVME G L+ Q+ N++
Sbjct: 54 ALKDELL---AEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQ--NRH 107
Query: 193 FTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ +V + ++YL V+RDL NVL+ + + +SDF LS
Sbjct: 108 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 158
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKG-QGNRATLFNVVGQPLRFP 386
++ APE I S D W+FG+ ++E +G P++G +G+ T G+ + P
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 236
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 170 CLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLV 229
++ C G L+S+ + + R A E++ + YLH GI+++DLK +NV
Sbjct: 105 AIITSLCKGRTLYSV-VRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY 163
Query: 230 RDEGHIMLSDFDL 242
D G ++++DF L
Sbjct: 164 -DNGKVVITDFGL 175
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 133 ASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKY 192
A +++LL E ++ LD+P++ + E + + LVME G L+ Q+ N++
Sbjct: 68 ALKDELL---AEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQ--NRH 121
Query: 193 FTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ +V + ++YL V+RDL NVL+ + + +SDF LS
Sbjct: 122 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 172
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKG-QGNRATLFNVVGQPLRFP 386
++ APE I S D W+FG+ ++E +G P++G +G+ T G+ + P
Sbjct: 193 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 250
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 133 ASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKY 192
A +++LL E ++ LD+P++ + E + + LVME G L+ Q+ N++
Sbjct: 70 ALKDELL---AEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQ--NRH 123
Query: 193 FTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ +V + ++YL V+RDL NVL+ + + +SDF LS
Sbjct: 124 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 174
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKG-QGNRATLFNVVGQPLRFP 386
++ APE I S D W+FG+ ++E +G P++G +G+ T G+ + P
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 252
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMK-VMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K +G G G VY +L + A+K V+ +R E +I+ LDH +
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 156
Query: 159 LYSYF-----ETDKFYC-LVMEFCSGG----NLHSLRQKQ--PNKYFTEDAARFFASEVL 206
L +F + D+ Y LV+++ H R KQ P Y + + ++
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLF 211
Query: 207 LALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
+L Y+H GI +RD+KP+N+L+ D + L DF
Sbjct: 212 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 246
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTT 364
C G+ +L+ NV S++ + Y APE+I G + S++D W+ G L ELL G
Sbjct: 244 CDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 300
Query: 365 PFKGQG---NRATLFNVVGQPLR 384
F G + V+G P R
Sbjct: 301 IFPGDSGVDQLVEIIKVLGTPTR 323
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 133 ASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKY 192
A +++LL E ++ LD+P++ + E + + LVME G L+ Q+ N++
Sbjct: 70 ALKDELL---AEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQ--NRH 123
Query: 193 FTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ +V + ++YL V+RDL NVL+ + + +SDF LS
Sbjct: 124 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 174
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKG-QGNRATLFNVVGQPLRFP 386
++ APE I S D W+FG+ ++E +G P++G +G+ T G+ + P
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 252
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 141
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 325 SFVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPL 383
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 241
Query: 384 RFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 242 FFRQ--RVSXECQHLIRWCLALRPXDRPTFE----EIQNHPWMQDV 281
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 140
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 174
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 326 FVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 241
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 242 FRQ--RVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 280
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMK-VMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K +G G G VY +L + A+K V+ +R E +I+ LDH +
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 85
Query: 159 LYSYF-----ETDKFYC-LVMEFCSGG----NLHSLRQKQ--PNKYFTEDAARFFASEVL 206
L +F + D+ Y LV+++ H R KQ P Y + + ++
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLF 140
Query: 207 LALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
+L Y+H GI +RD+KP+N+L+ D + L DF
Sbjct: 141 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 175
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTT 364
C G+ +L+ NV S + + Y APE+I G + S++D W+ G L ELL G
Sbjct: 173 CDFGSAKQLVRGEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 229
Query: 365 PFKGQG---NRATLFNVVGQPLR 384
F G + V+G P R
Sbjct: 230 IFPGDSGVDQLVEIIKVLGTPTR 252
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 133 ASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKY 192
A +++LL E ++ LD+P++ + E + + LVME G L+ Q+ N++
Sbjct: 54 ALKDELL---AEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQ--NRH 107
Query: 193 FTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ +V + ++YL V+RDL NVL+ + + +SDF LS
Sbjct: 108 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 158
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKG-QGNRATLFNVVGQPLRFP 386
++ APE I S D W+FG+ ++E +G P++G +G+ T G+ + P
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 236
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 20/139 (14%)
Query: 100 KRLGYGDIGSV-YLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K LGYG G+V + +G ++D +A L +++ DHP +
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-------DHPNVIR 73
Query: 159 LYSYFETDKFYCLVMEFCS--------GGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
Y TD+F + +E C+ N+ K +Y R AS V
Sbjct: 74 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV----A 129
Query: 211 YLHMLGIVYRDLKPENVLV 229
+LH L I++RDLKP+N+LV
Sbjct: 130 HLHSLKIIHRDLKPQNILV 148
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMK-VMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K +G G G VY +L + A+K V+ +R E +I+ LDH +
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 96
Query: 159 LYSYF-----ETDKFYC-LVMEFCSGG----NLHSLRQKQ--PNKYFTEDAARFFASEVL 206
L +F + D+ Y LV+++ H R KQ P Y + + ++
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLF 151
Query: 207 LALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
+L Y+H GI +RD+KP+N+L+ D + L DF
Sbjct: 152 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 186
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTT 364
C G+ +L+ NV S + + Y APE+I G + S++D W+ G L ELL G
Sbjct: 184 CDFGSAKQLVRGEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 240
Query: 365 PFKGQG---NRATLFNVVGQPLR 384
F G + V+G P R
Sbjct: 241 IFPGDSGVDQLVEIIKVLGTPTR 263
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMK-VMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K +G G G VY +L + A+K V+ +R E +I+ LDH +
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 89
Query: 159 LYSYF-----ETDKFYC-LVMEFCSGG----NLHSLRQKQ--PNKYFTEDAARFFASEVL 206
L +F + D+ Y LV+++ H R KQ P Y + + ++
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLF 144
Query: 207 LALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
+L Y+H GI +RD+KP+N+L+ D + L DF
Sbjct: 145 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 179
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTT 364
C G+ +L+ NV S + + Y APE+I G + S++D W+ G L ELL G
Sbjct: 177 CDFGSAKQLVRGEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 233
Query: 365 PFKGQG---NRATLFNVVGQPLR 384
F G + V+G P R
Sbjct: 234 IFPGDSGVDQLVEIIKVLGTPTR 256
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 151 LDHPFLPTLYS--YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLA 208
+D PF T Y + E D + C + S + + + ED A ++ A
Sbjct: 90 VDCPFTVTFYGALFREGDVWICXELXDTSLDKFYK-QVIDKGQTIPEDILGKIAVSIVKA 148
Query: 209 LEYLH-MLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
LE+LH L +++RD+KP NVL+ G + DF +S
Sbjct: 149 LEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 27/155 (17%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMK-VMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K +G G G VY +L + A+K V+ + +R E +I+ LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKLDHCNIVR 77
Query: 159 LYSYF-----ETDKFYC-LVMEFCSGGNL----HSLRQKQ--PNKYFTEDAARFFASEVL 206
L +F + D+ Y LV+++ H R KQ P Y + + ++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLF 132
Query: 207 LALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
+L Y+H GI +RD+KP+N+L+ D + L DF
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTT 364
C G+ +L+ NV S++ + Y APE+I G + S++D W+ G L ELL G
Sbjct: 165 CDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
Query: 365 PFKGQG---NRATLFNVVGQPLR 384
F G + V+G P R
Sbjct: 222 IFPGDSGVDQLVEIIKVLGTPTR 244
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 27/155 (17%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMK-VMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K +G G G VY +L + A+K V+ + +R E +I+ LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKLDHCNIVR 77
Query: 159 LYSYF-----ETDKFYC-LVMEFCSGGNL----HSLRQKQ--PNKYFTEDAARFFASEVL 206
L +F + D+ Y LV+++ H R KQ P Y + + ++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLF 132
Query: 207 LALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
+L Y+H GI +RD+KP+N+L+ D + L DF
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTT 364
C G+ +L+ NV S++ + Y APE+I G + S++D W+ G L ELL G
Sbjct: 165 CDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
Query: 365 PFKGQG---NRATLFNVVGQPLR 384
F G + V+G P R
Sbjct: 222 IFPGDSGVDQLVEIIKVLGTPTR 244
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMK-VMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K +G G G VY +L + A+K V+ +R E +I+ LDH +
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 89
Query: 159 LYSYF-----ETDKFYC-LVMEFCSGG----NLHSLRQKQ--PNKYFTEDAARFFASEVL 206
L +F + D+ Y LV+++ H R KQ P Y + + ++
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLF 144
Query: 207 LALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
+L Y+H GI +RD+KP+N+L+ D + L DF
Sbjct: 145 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 179
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTT 364
C G+ +L+ NV S + + Y APE+I G + S++D W+ G L ELL G
Sbjct: 177 CDFGSAKQLVRGEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 233
Query: 365 PFKGQG---NRATLFNVVGQPLR 384
F G + V+G P R
Sbjct: 234 IFPGDSGVDQLVEIIKVLGTPTR 256
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMK-VMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K +G G G VY +L + A+K V+ +R E +I+ LDH +
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 90
Query: 159 LYSYF-----ETDKFYC-LVMEFCSGG----NLHSLRQKQ--PNKYFTEDAARFFASEVL 206
L +F + D+ Y LV+++ H R KQ P Y + + ++
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLF 145
Query: 207 LALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
+L Y+H GI +RD+KP+N+L+ D + L DF
Sbjct: 146 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 180
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTT 364
C G+ +L+ NV S++ + Y APE+I G + S++D W+ G L ELL G
Sbjct: 178 CDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 234
Query: 365 PFKGQG---NRATLFNVVGQPLR 384
F G + V+G P R
Sbjct: 235 IFPGDSGVDQLVEIIKVLGTPTR 257
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 133 ASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKY 192
A +++LL E ++ LD+P++ + E + + LVME G L+ Q+ N++
Sbjct: 48 ALKDELL---AEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQ--NRH 101
Query: 193 FTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ +V + ++YL V+RDL NVL+ + + +SDF LS
Sbjct: 102 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 152
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKG-QGNRATLFNVVGQPLRFP 386
++ APE I S D W+FG+ ++E +G P++G +G+ T G+ + P
Sbjct: 173 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 230
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 56 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 115
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 116 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 173
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 174 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 207
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 326 FVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 221 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 274
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 275 FRQ--RVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 313
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 24/166 (14%)
Query: 100 KRLGYGDIGSVYLVELRGTN-------TYFAMKVMDKASLASRNKLLRAQTEREILGLL- 151
K LG G G V L E G + T A+K++ S A+ L +E E++ ++
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKMIG 91
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQ--------------PNKYFTEDA 197
H + L D +++E+ S GNL Q + P + +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 198 ARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
A +V +EYL ++RDL NVLV ++ + ++DF L+
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 133 ASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKY 192
A +++LL E ++ LD+P++ + E + + LVME G L+ Q+ N++
Sbjct: 60 ALKDELL---AEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQ--NRH 113
Query: 193 FTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ +V + ++YL V+RDL NVL+ + + +SDF LS
Sbjct: 114 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 164
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKG-QGNRATLFNVVGQPLRFP 386
++ APE I S D W+FG+ ++E +G P++G +G+ T G+ + P
Sbjct: 185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 242
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMK-VMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K +G G G VY +L + A+K V+ +R E +I+ LDH +
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 82
Query: 159 LYSYF-----ETDKFYC-LVMEFCSGG----NLHSLRQKQ--PNKYFTEDAARFFASEVL 206
L +F + D+ Y LV+++ H R KQ P Y + + ++
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLF 137
Query: 207 LALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
+L Y+H GI +RD+KP+N+L+ D + L DF
Sbjct: 138 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 172
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTT 364
C G+ +L+ NV S++ + Y APE+I G + S++D W+ G L ELL G
Sbjct: 170 CDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 226
Query: 365 PFKGQG---NRATLFNVVGQPLR 384
F G + V+G P R
Sbjct: 227 IFPGDSGVDQLVEIIKVLGTPTR 249
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 133 ASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKY 192
A +++LL E ++ LD+P++ + E + + LVME G L+ Q+ N++
Sbjct: 50 ALKDELL---AEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQ--NRH 103
Query: 193 FTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ +V + ++YL V+RDL NVL+ + + +SDF LS
Sbjct: 104 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 154
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKG-QGNRATLFNVVGQPLRFP 386
++ APE I S D W+FG+ ++E +G P++G +G+ T G+ + P
Sbjct: 175 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 232
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 126
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 326 FVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 227
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 228 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 266
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMK-VMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K +G G G VY +L + A+K V+ +R E +I+ LDH +
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 81
Query: 159 LYSYF-----ETDKFYC-LVMEFCSGG----NLHSLRQKQ--PNKYFTEDAARFFASEVL 206
L +F + D+ Y LV+++ H R KQ P Y + + ++
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLF 136
Query: 207 LALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
+L Y+H GI +RD+KP+N+L+ D + L DF
Sbjct: 137 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 171
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTT 364
C G+ +L+ NV S + + Y APE+I G + S++D W+ G L ELL G
Sbjct: 169 CDFGSAKQLVRGEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 225
Query: 365 PFKGQG---NRATLFNVVGQPLR 384
F G + V+G P R
Sbjct: 226 IFPGDSGVDQLVEIIKVLGTPTR 248
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 67/158 (42%), Gaps = 24/158 (15%)
Query: 277 VHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPE 336
+H ++PS IL + DFG + G L + +A+ + G Y+APE
Sbjct: 148 IHRDIKPSN----ILLDRSGNIKLCDFG--ISGQLVDSIAKTRDA------GCRPYMAPE 195
Query: 337 II----RGEGHGSAVDWWTFGIFLYELLHGTTPF-KGQGNRATLFNVV-GQPLRFPETPQ 390
I +G+ D W+ GI LYEL G P+ K L VV G P + + +
Sbjct: 196 RIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEE 255
Query: 391 VSFVAR--DLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
F + + L K+ KR YK E+ +HPF
Sbjct: 256 REFSPSFINFVNLCLTKDESKRPKYK----ELLKHPFI 289
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 95 NFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
+ + L +G G GSV + + + A+K + K L + ++ D P
Sbjct: 23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDV-VMRSSDCP 81
Query: 155 FLPTLYS--YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
++ Y + E D + C+ + S + + E+ + AL +L
Sbjct: 82 YIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHL 141
Query: 213 -HMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
L I++RD+KP N+L+ G+I L DF +S
Sbjct: 142 KENLKIIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMK-VMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K +G G G VY +L + A+K V+ +R E +I+ LDH +
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 78
Query: 159 LYSYF-----ETDKFYC-LVMEFCSGG----NLHSLRQKQ--PNKYFTEDAARFFASEVL 206
L +F + D+ Y LV+++ H R KQ P Y + + ++
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLF 133
Query: 207 LALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
+L Y+H GI +RD+KP+N+L+ D + L DF
Sbjct: 134 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 168
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTT 364
C G+ +L+ NV S + + Y APE+I G + S++D W+ G L ELL G
Sbjct: 166 CDFGSAKQLVRGEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 222
Query: 365 PFKGQG---NRATLFNVVGQPLR 384
F G + V+G P R
Sbjct: 223 IFPGDSGVDQLVEIIKVLGTPTR 245
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 98 LLKRLGYGDIGSVYLVELRGTN-------TYFAMKVMDKASLASRNKLLRAQTEREILGL 150
L K LG G G V L E G + T A+K++ S A+ L +E E++ +
Sbjct: 24 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKM 81
Query: 151 L-DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQ--------------PNKYFTE 195
+ H + L D +++E+ S GNL Q + P + +
Sbjct: 82 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 141
Query: 196 DAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
A +V +EYL ++RDL NVLV ++ + ++DF L+
Sbjct: 142 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 189
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 90
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 91 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 148
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 149 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 182
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 17/108 (15%)
Query: 325 SFVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGN--RATLFNVVGQ 381
F GT Y PE IR HG + W+ GI LY+++ G PF+ R +F
Sbjct: 195 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---- 250
Query: 382 PLRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
+VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 251 ------RQRVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 288
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 17/108 (15%)
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLRFP 386
VGT Y++PE I G + VD ++ G+ L+ELL+ F Q R + V + L+FP
Sbjct: 237 VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS---FSTQMERVRIITDV-RNLKFP 292
Query: 387 -----ETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
+ PQ + +D++ + P AT+I ++ FE +
Sbjct: 293 LLFTQKYPQEHMMVQDMLSPSPTERPE--------ATDIIENAIFENL 332
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 15/94 (15%)
Query: 153 HPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL----A 208
P P +Y Y + M+ C NL ++ + ED + + A
Sbjct: 128 QPSSPKVYLYIQ--------MQLCRKENLKDWMNRRCS---LEDREHGVCLHIFIQIAEA 176
Query: 209 LEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL 242
+E+LH G+++RDLKP N+ + + + DF L
Sbjct: 177 VEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 210
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMK-VMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K +G G G VY +L + A+K V+ +R E +I+ LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 77
Query: 159 LYSYF-----ETDKFYC-LVMEFCSGG----NLHSLRQKQ--PNKYFTEDAARFFASEVL 206
L +F + D+ Y LV+++ H R KQ P Y + + ++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLF 132
Query: 207 LALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
+L Y+H GI +RD+KP+N+L+ D + L DF
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTT 364
C G+ +L+ NV S + + Y APE+I G + S++D W+ G L ELL G
Sbjct: 165 CDFGSAKQLVRGEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
Query: 365 PFKGQG---NRATLFNVVGQPLR 384
F G + V+G P R
Sbjct: 222 IFPGDSGVDQLVEIIKVLGTPTR 244
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMK-VMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K +G G G VY +L + A+K V+ +R E +I+ LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 77
Query: 159 LYSYF-----ETDKFYC-LVMEFCSGG----NLHSLRQKQ--PNKYFTEDAARFFASEVL 206
L +F + D+ Y LV+++ H R KQ P Y + + ++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLF 132
Query: 207 LALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
+L Y+H GI +RD+KP+N+L+ D + L DF
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTT 364
C G+ +L+ NV S + + Y APE+I G + S++D W+ G L ELL G
Sbjct: 165 CDFGSAKQLVRGEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
Query: 365 PFKGQG---NRATLFNVVGQPLR 384
F G + V+G P R
Sbjct: 222 IFPGDSGVDQLVEIIKVLGTPTR 244
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 125
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 159
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 326 FVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 226
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 227 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 265
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP------F 155
+G G G V R + A+K++ + L +AQ E +L L++ +
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIKN----KKAFLNQAQIEVRLLELMNKHDTEMKYY 117
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM- 214
+ L +F CLV E S NL+ L + + + + R FA ++ AL +L
Sbjct: 118 IVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP 176
Query: 215 -LGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSV 248
L I++ DLKPEN+L+ + + D C +
Sbjct: 177 ELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQL 211
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ 381
R + + Y +PE++ G + A+D W+ G L E+ G F G N N + +
Sbjct: 214 RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG-ANEVDQMNKIVE 272
Query: 382 PLRFP 386
L P
Sbjct: 273 VLGIP 277
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 126
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 17/107 (15%)
Query: 326 FVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGN--RATLFNVVGQP 382
F GT Y PE IR HG + W+ GI LY+++ G PF+ R +F
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF----- 228
Query: 383 LRFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
+VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 229 -----RQRVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 266
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 153
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 326 FVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 254
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 255 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 293
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 192 YFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
Y TE + +L+ ++Y+H GI++RDLKP N LV + + + DF L+
Sbjct: 152 YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLA 203
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 98 LLKRLGYGDIGSVYLVELRGTN-------TYFAMKVMDKASLASRNKLLRAQTEREILGL 150
L K LG G G V L E G + T A+K++ S A+ L +E E++ +
Sbjct: 21 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKM 78
Query: 151 L-DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQ--------------PNKYFTE 195
+ H + L D +++E+ S GNL Q + P + +
Sbjct: 79 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 138
Query: 196 DAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
A +V +EYL ++RDL NVLV ++ + ++DF L+
Sbjct: 139 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 186
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 168
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 326 FVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 269
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 270 FRQ--RVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 308
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 98 LLKRLGYGDIGSVYLVELRGTN-------TYFAMKVMDKASLASRNKLLRAQTEREILGL 150
L K LG G G V L E G + T A+K++ S A+ L +E E++ +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKM 89
Query: 151 L-DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQ--------------PNKYFTE 195
+ H + L D +++E+ S GNL Q + P + +
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSS 149
Query: 196 DAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
A +V +EYL ++RDL NVLV ++ + ++DF L+
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 98 LLKRLGYGDIGSVYLVELRGTN-------TYFAMKVMDKASLASRNKLLRAQTEREILGL 150
L K LG G G V L E G + T A+K++ S A+ L +E E++ +
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKM 130
Query: 151 L-DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQ--------------PNKYFTE 195
+ H + L D +++E+ S GNL Q + P + +
Sbjct: 131 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190
Query: 196 DAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
A +V +EYL ++RDL NVLV ++ + ++DF L+
Sbjct: 191 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 238
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMK-VMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K +G G G VY +L + A+K V+ +R E +I+ LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 77
Query: 159 LYSYF-----ETDKFYC-LVMEFCSGGNL----HSLRQKQ--PNKYFTEDAARFFASEVL 206
L +F + D+ Y LV+++ H R KQ P Y + + ++
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLF 132
Query: 207 LALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
+L Y+H GI +RD+KP+N+L+ D + L DF
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTT 364
C G+ +L+ NV S++ + Y APE+I G + S++D W+ G L ELL G
Sbjct: 165 CDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
Query: 365 PFKGQG---NRATLFNVVGQPLR 384
F G + V+G P R
Sbjct: 222 IFPGDSGVDQLVEIIKVLGTPTR 244
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP------F 155
+G G G V R + A+K++ + L +AQ E +L L++ +
Sbjct: 43 IGKGSFGQVVKAYDRVEQEWVAIKIIKN----KKAFLNQAQIEVRLLELMNKHDTEMKYY 98
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM- 214
+ L +F CLV E S NL+ L + + + + R FA ++ AL +L
Sbjct: 99 IVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP 157
Query: 215 -LGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSV 248
L I++ DLKPEN+L+ + + D C +
Sbjct: 158 ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 192
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ 381
R + + Y +PE++ G + A+D W+ G L E+ G F G N N + +
Sbjct: 195 RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG-ANEVDQMNKIVE 253
Query: 382 PLRFP 386
L P
Sbjct: 254 VLGIP 258
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 98 LLKRLGYGDIGSVYLVELRGTN-------TYFAMKVMDKASLASRNKLLRAQTEREILGL 150
L K LG G G V L E G + T A+K++ S A+ L +E E++ +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKM 89
Query: 151 L-DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQ--------------PNKYFTE 195
+ H + L D +++E+ S GNL Q + P + +
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 149
Query: 196 DAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
A +V +EYL ++RDL NVLV ++ + ++DF L+
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
K+L A I+G+ D PT+ E K +V + +L+ L + Q + + D
Sbjct: 75 KILLAFRHENIIGINDIIRAPTI----EQMKDVYIVQDLMET-DLYKLLKTQ---HLSND 126
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H +++RDLKP N+L+ + + DF L+
Sbjct: 127 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLA 173
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 62/168 (36%), Gaps = 39/168 (23%)
Query: 292 PSKKNRKSKSDFGPCVGGALPELMAEPTNVRS---MSFVGTHEYLAPEI-IRGEGHGSAV 347
PS + SD C G +A+P + + +V T Y APEI + +G+ ++
Sbjct: 154 PSNLLLNTTSDLKICDFGL--ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 211
Query: 348 DWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVGQP-----------------LRFPE 387
D W+ G L E+L F G+ L ++G P L P
Sbjct: 212 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYLLSLPH 271
Query: 388 T---------PQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFF 426
P A DL+ +L PHKRI ++ HP+
Sbjct: 272 KNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA----HPYL 315
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 63/165 (38%), Gaps = 19/165 (11%)
Query: 95 NFRLLKRLGYGDIGSVYLVEL-----RGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
N L + LG G G V+L E A+K + AS +R R E E+L
Sbjct: 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHR---EAELLT 70
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQPNKYF----------TEDAA 198
L H + Y +V E+ G+L+ LR P+ T+
Sbjct: 71 NLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQM 130
Query: 199 RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
A ++ + YL V+RDL N LV + + + DF +S
Sbjct: 131 LHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMS 175
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVV-GQPLRFPET- 388
++ PE I + D W+ G+ L+E+ +G P+ N + + G+ L+ P T
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTC 255
Query: 389 PQVSFVARDLIRGLLVKEPHKR 410
PQ + +L+ G +EPH R
Sbjct: 256 PQEVY---ELMLGCWQREPHMR 274
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 168
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 326 FVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 269
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 270 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 308
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 98 LLKRLGYGDIGSVYLVELRGTN-------TYFAMKVMDKASLASRNKLLRAQTEREILGL 150
L K LG G G V L E G + T A+K++ S A+ L +E E++ +
Sbjct: 25 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKM 82
Query: 151 L-DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQ--------------PNKYFTE 195
+ H + L D +++E+ S GNL Q + P + +
Sbjct: 83 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 142
Query: 196 DAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
A +V +EYL ++RDL NVLV ++ + ++DF L+
Sbjct: 143 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 190
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 24/166 (14%)
Query: 100 KRLGYGDIGSVYLVELRGTN-------TYFAMKVMDKASLASRNKLLRAQTEREILGLL- 151
K LG G G V L E G + T A+K++ S A+ L +E E++ ++
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKMIG 76
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQ--------------PNKYFTEDA 197
H + L D +++E+ S GNL Q + P + +
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 198 ARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
A +V +EYL ++RDL NVLV ++ + ++DF L+
Sbjct: 137 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 182
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 105/301 (34%), Gaps = 75/301 (24%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELR---GTNTYFAMKVMDKA-SLASRNKLLRAQTERE 146
I +S ++ + +G G+ G V L+ + A+K + + R L +E
Sbjct: 4 IDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFL---SEAS 60
Query: 147 ILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVL 206
I+G DHP + L ++ EF G+L S +Q + FT +
Sbjct: 61 IMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL-RQNDGQFTVIQLVGMLRGIA 119
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXX 266
++YL + V+R L N+LV +SDF LS
Sbjct: 120 AGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLS----------------------- 156
Query: 267 XXXILNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSF 326
R L ++ S + +GG +P P ++ F
Sbjct: 157 ----------------------RFL---EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKF 191
Query: 327 VGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRF 385
SA D W++GI ++E++ +G P+ N+ + N + Q R
Sbjct: 192 T-----------------SASDVWSYGIVMWEVMSYGERPYWDMTNQ-DVINAIEQDYRL 233
Query: 386 P 386
P
Sbjct: 234 P 234
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 126
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 326 FVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 227
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 228 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 266
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 143 TEREILGLLDHPFLPTLYSYFETDK---FYCLVMEFCSGGNLHSLRQKQPNKYFTEDAAR 199
+RE+ L + P + YF T+K F + +E C+ + QK E
Sbjct: 64 ADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPIT- 122
Query: 200 FFASEVLLALEYLHMLGIVYRDLKPENVLV---RDEGHI--MLSDFDLSLRCSV 248
+ L +LH L IV+RDLKP N+L+ G I M+SDF L + +V
Sbjct: 123 -LLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 19/139 (13%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIR---GEGHGSAVDWWTFG-IFL 356
SDFG C A+ + R GT ++APE++ E VD ++ G +F
Sbjct: 165 SDFGLCKKLAV----GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFY 220
Query: 357 YELLHGTTPFKGQGNRAT--LFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKRIAYK 414
Y + G+ PF R L PE + +AR+LI ++ +P KR +
Sbjct: 221 YVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHE-DVIARELIEKMIAMDPQKRPS-- 277
Query: 415 RGATEIKQHPFFEGVNWAL 433
A + +HPFF W+L
Sbjct: 278 --AKHVLKHPFF----WSL 290
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 24/166 (14%)
Query: 100 KRLGYGDIGSVYLVELRGTN-------TYFAMKVMDKASLASRNKLLRAQTEREILGLL- 151
K LG G G V L E G + T A+K++ S A+ L +E E++ ++
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKMIG 91
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQ--------------PNKYFTEDA 197
H + L D +++E+ S GNL Q + P + +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 198 ARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
A +V +EYL ++RDL NVLV ++ + ++DF L+
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 76
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T ++ G L +R+ + N +Y + ++
Sbjct: 77 SVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 131
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 132 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 168
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 102 LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP------F 155
+G G G V R + A+K++ + L +AQ E +L L++ +
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIKN----KKAFLNQAQIEVRLLELMNKHDTEMKYY 117
Query: 156 LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHM- 214
+ L +F CLV E S NL+ L + + + + R FA ++ AL +L
Sbjct: 118 IVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP 176
Query: 215 -LGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSV 248
L I++ DLKPEN+L+ + + D C +
Sbjct: 177 ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL 211
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 322 RSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQ 381
R + + Y +PE++ G + A+D W+ G L E+ G F G N N + +
Sbjct: 214 RIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG-ANEVDQMNKIVE 272
Query: 382 PLRFP 386
L P
Sbjct: 273 VLGIP 277
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 326 FVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 269
Query: 385 FPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 270 FRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 308
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 193 FTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
E+ AR F +VL A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 121
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 155
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 325 SFVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPL 383
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 221
Query: 384 RFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 222 FFRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 261
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 75
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T ++ G L +R+ + N +Y + ++
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 130
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 74
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T ++ G L +R+ + N +Y + ++
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 129
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 73
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T ++ G L +R+ + N +Y + ++
Sbjct: 74 SVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLN-----WCVQIA 128
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 129 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 73
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T ++ G L +R+ + N +Y + ++
Sbjct: 74 SVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 128
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 129 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 72
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T ++ G L +R+ + N +Y + ++
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 127
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 25/176 (14%)
Query: 84 ISLRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQT 143
+++ G +G S + LK LG G G V+ + A+K K L + A
Sbjct: 2 MNIHGFDLG-SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIK---KIVLTDPQSVKHALR 57
Query: 144 EREILGLLDHPFLPTLY---------------SYFETDKFYCLVMEFCSGGNLHSLRQKQ 188
E +I+ LDH + ++ S E + Y +V E+ +L ++ ++
Sbjct: 58 EIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVY-IVQEYMET-DLANVLEQG 115
Query: 189 PNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIM-LSDFDLS 243
P E+ AR F ++L L+Y+H +++RDLKP N+ + E ++ + DF L+
Sbjct: 116 P---LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLA 168
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 121
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLNRGELKLIDF 155
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 325 SFVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPL 383
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 221
Query: 384 RFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 222 FFRQ--RVSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 261
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKL---LRAQTEREILGL 150
S +++ LG G GSVY N A+K ++K ++ +L R E +L
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 66
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCS-GGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ F + L +FE + L++E +L ++ E+ AR F +VL
Sbjct: 67 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 124
Query: 208 ALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
A+ + H G+++RD+K EN+L+ + G + L DF
Sbjct: 125 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 158
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 325 SFVGTHEYLAPEIIR-GEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPL 383
F GT Y PE IR HG + W+ GI LY+++ G PF+ ++ +
Sbjct: 171 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 224
Query: 384 RFPETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGV 429
F + +VS + LIR L P R ++ EI+ HP+ + V
Sbjct: 225 FFRQ--RVSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQDV 264
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 137 KLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTED 196
K+L A I+G+ D PT+ E K +V + +L+ L + Q + + D
Sbjct: 75 KILLAFRHENIIGINDIIRAPTI----EQMKDVYIVQDLMET-DLYKLLKTQ---HLSND 126
Query: 197 AARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+F ++L L+Y+H +++RDLKP N+L+ + + DF L+
Sbjct: 127 HICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 173
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 325 SFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPL 383
+V T Y APEI + +G+ ++D W+ G L E+L F G+ L +++G L
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-IL 246
Query: 384 RFPETPQVSFVARDLIRGLLVKEPHK 409
P ++ + R L+ PHK
Sbjct: 247 GSPSQEDLNCIINLKARNYLLSLPHK 272
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 27/155 (17%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMK-VMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
K +G G G VY +L + A+K V+ +R E +I+ LDH +
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKLDHCNIVR 77
Query: 159 LYSYF-----ETDKFYC-LVMEFCSGG----NLHSLRQKQ--PNKYFTEDAARFFASEVL 206
L +F + D Y LV+++ H R KQ P Y + + ++
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLF 132
Query: 207 LALEYLHMLGIVYRDLKPENVLVR-DEGHIMLSDF 240
+L Y+H GI +RD+KP+N+L+ D + L DF
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 306 CVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGE-GHGSAVDWWTFGIFLYELLHGTT 364
C G+ +L+ NV S + + Y APE+I G + S++D W+ G L ELL G
Sbjct: 165 CDFGSAKQLVRGEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
Query: 365 PFKGQG---NRATLFNVVGQPLR 384
F G + V+G P R
Sbjct: 222 IFPGDSGVDQLVEIIKVLGTPTR 244
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 74
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T + G L +R+ + N +Y + ++
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 129
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 8/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ + +K LG G G+VY + E A+K++++ + N + E I+
Sbjct: 38 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN--VEFMDEALIMA 95
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLAL 209
+DHP L L + + G L + + + N + ++ +
Sbjct: 96 SMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDN--IGSQLLLNWCVQIAKGM 153
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 154 MYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA 187
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 79
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T + G L +R+ + N +Y + ++
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 134
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 78
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T + G L +R+ + N +Y + ++
Sbjct: 79 SVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 133
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 134 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 170
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 75
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T + G L +R+ + N +Y + ++
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 130
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 72
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T + G L +R+ + N +Y + ++
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 127
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 72
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T + G L +R+ + N +Y + ++
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLN-----WCVQIA 127
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 82
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T + G L +R+ + N +Y + ++
Sbjct: 83 SVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 137
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 138 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 174
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 75
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T + G L +R+ + N +Y + ++
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 130
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 6/156 (3%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELR---GTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
I S ++ K +G G+ G V L+ A+K + KA + + +E I
Sbjct: 26 IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTDKQRR-DFLSEASI 83
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+G DHP + L K ++ E+ G+L + +K + FT +
Sbjct: 84 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGMLRGIGS 142
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++YL + V+RDL N+LV +SDF +S
Sbjct: 143 GMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMS 178
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ APE I SA D W++GI ++E++ +G P+ N+ + + + R P
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVIKAIEEGYRLP 254
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 75
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T + G L +R+ + N +Y + ++
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 130
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 325 SFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPL 383
+V T Y APEI + +G+ ++D W+ G L E+L F G+ L +++G L
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG-IL 242
Query: 384 RFPETPQVSFVARDLIRGLLVKEPHK 409
PE ++ + R L+ PHK
Sbjct: 243 GSPEQEDLNCIINLKARNYLLSLPHK 268
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 122 FAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL 181
F + + +L LLR + E I+G+ D PT+ E K +V + +L
Sbjct: 57 FEHQTYCQRTLREIKILLRFRHE-NIIGINDIIRAPTI----EQMKDVYIVQDLMET-DL 110
Query: 182 HSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFD 241
+ L + Q + + D +F ++L L+Y+H +++RDLKP N+L+ + + DF
Sbjct: 111 YKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 167
Query: 242 LS 243
L+
Sbjct: 168 LA 169
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 97
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T + G L +R+ + N +Y + ++
Sbjct: 98 SVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 152
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 153 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 189
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 65/166 (39%), Gaps = 23/166 (13%)
Query: 98 LLKR-LGYGDIGSVYLVELRGTN-----TYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
+LKR LG G G V+L E + A+K + +LA+R Q E E+L L
Sbjct: 18 VLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDF---QREAELLTNL 74
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQPNKYFTEDAA------------ 198
H + Y +V E+ G+L+ LR P+ D
Sbjct: 75 QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 199 -RFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
AS++ + YL V+RDL N LV + + DF +S
Sbjct: 135 MLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMS 180
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVEL---RGTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
IG + RLL++LG G G V E G A+K + L+ + E
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ LDH L LY T +V E G+L +K + +R+ A +V
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY-AVQVAE 132
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL 242
+ YL ++RDL N+L+ + + DF L
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ APE ++ A D W FG+ L+E+ +G P+ G L + + R P
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 72
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T + G L +R+ + N +Y + ++
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 127
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVEL---RGTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
IG + RLL++LG G G V E G A+K + L+ + E
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ LDH L LY T +V E G+L +K + +R+ A +V
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY-AVQVAE 126
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL 242
+ YL ++RDL N+L+ + + DF L
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ APE ++ A D W FG+ L+E+ +G P+ G L + + R P
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVEL---RGTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
IG + RLL++LG G G V E G A+K + L+ + E
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ LDH L LY T +V E G+L +K + +R+ A +V
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY-AVQVAE 132
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL 242
+ YL ++RDL N+L+ + + DF L
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ APE ++ A D W FG+ L+E+ +G P+ G L + + R P
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 328 GTHEYLAPEIIRGEG---HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
G+ ++APE+IR + + D + FGI LYEL+ G P+ NR + +VG+
Sbjct: 195 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 254
Query: 385 FPETPQV 391
P+ +V
Sbjct: 255 SPDLSKV 261
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTL 159
+R+G G G+VY + G A+K+++ + + +L + E +L H + L
Sbjct: 41 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 95
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
+ + T +V ++C G +L+ K F A + ++YLH I++
Sbjct: 96 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIH 154
Query: 220 RDLKPENVLVRDEGHIMLSDFDLS 243
RDLK N+ + ++ + + DF L+
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLA 178
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTL 159
+R+G G G+VY + G A+K+++ + + +L + E +L H + L
Sbjct: 16 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 70
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
+ + T +V ++C G +L+ K F A + ++YLH I++
Sbjct: 71 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIH 129
Query: 220 RDLKPENVLVRDEGHIMLSDFDLS 243
RDLK N+ + ++ + + DF L+
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLA 153
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 328 GTHEYLAPEIIRGEG---HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
G+ ++APE+IR + + D + FGI LYEL+ G P+ NR + +VG+
Sbjct: 170 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 229
Query: 385 FPETPQV 391
P+ +V
Sbjct: 230 SPDLSKV 236
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 328 GTHEYLAPEIIRGEG---HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
G+ ++APE+IR + + D + FGI LYEL+ G P+ NR + +VG+
Sbjct: 188 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 247
Query: 385 FPETPQV 391
P+ +V
Sbjct: 248 SPDLSKV 254
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTL 159
+R+G G G+VY + G A+K+++ + + +L + E +L H + L
Sbjct: 34 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 88
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
+ + T +V ++C G +L+ K F A + ++YLH I++
Sbjct: 89 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIH 147
Query: 220 RDLKPENVLVRDEGHIMLSDFDLS 243
RDLK N+ + ++ + + DF L+
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTL 159
+R+G G G+VY + G A+K+++ + + +L + E +L H + L
Sbjct: 19 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 73
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
+ + T +V ++C G +L+ K F A + ++YLH I++
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIH 132
Query: 220 RDLKPENVLVRDEGHIMLSDFDLS 243
RDLK N+ + ++ + + DF L+
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLA 156
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 328 GTHEYLAPEIIRGEG---HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
G+ ++APE+IR + + D + FGI LYEL+ G P+ NR + +VG+
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 232
Query: 385 FPETPQV 391
P+ +V
Sbjct: 233 SPDLSKV 239
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 6/156 (3%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELR---GTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
I S ++ K +G G+ G V L+ A+K + KA + + +E I
Sbjct: 5 IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTDKQRR-DFLSEASI 62
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+G DHP + L K ++ E+ G+L + +K + FT +
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGMLRGIGS 121
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++YL + V+RDL N+LV +SDF +S
Sbjct: 122 GMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS 157
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ APE I SA D W++GI ++E++ +G P+ N+ + + + R P
Sbjct: 179 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVIKAIEEGYRLP 233
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVEL---RGTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
IG + RLL++LG G G V E G A+K + L+ + E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ LDH L LY T +V E G+L +K + +R+ A +V
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY-AVQVAE 122
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL 242
+ YL ++RDL N+L+ + + DF L
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ APE ++ A D W FG+ L+E+ +G P+ G L + + R P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 328 GTHEYLAPEIIRGEG---HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
G+ ++APE+IR + + D + FGI LYEL+ G P+ NR + +VG+
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 255
Query: 385 FPETPQV 391
P+ +V
Sbjct: 256 SPDLSKV 262
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTL 159
+R+G G G+VY + G A+K+++ + + +L + E +L H + L
Sbjct: 42 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 96
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
+ + T +V ++C G +L+ K F A + ++YLH I++
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIH 155
Query: 220 RDLKPENVLVRDEGHIMLSDFDLS 243
RDLK N+ + ++ + + DF L+
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTL 159
+R+G G G+VY + G A+K+++ + + +L + E +L H + L
Sbjct: 19 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 73
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
+ + T +V ++C G +L+ K F A + ++YLH I++
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIH 132
Query: 220 RDLKPENVLVRDEGHIMLSDFDLS 243
RDLK N+ + ++ + + DF L+
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLA 156
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 328 GTHEYLAPEIIRGEG---HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
G+ ++APE+IR + + D + FGI LYEL+ G P+ NR + +VG+
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 232
Query: 385 FPETPQV 391
P+ +V
Sbjct: 233 SPDLSKV 239
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 62/152 (40%), Gaps = 7/152 (4%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRA--QTEREILGLLDH 153
+ ++ LG G G V L TN V KA LR+ Q E EIL L H
Sbjct: 10 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYH 69
Query: 154 PFLPTLYSYFET--DKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
+ E +K LVME+ G SLR P FA ++ + Y
Sbjct: 70 EHIVKYKGCCEDQGEKSVQLVMEYVPLG---SLRDYLPRHCVGLAQLLLFAQQICEGMAY 126
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
LH ++R L NVL+ ++ + + DF L+
Sbjct: 127 LHAQHYIHRALAARNVLLDNDRLVKIGDFGLA 158
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 122 FAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL 181
F + + +L LLR + E I+G+ D PT+ E K +V + +L
Sbjct: 63 FEHQTYXQRTLREIKILLRFRHE-NIIGINDIIRAPTI----EQMKDVYIVQDLMET-DL 116
Query: 182 HSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFD 241
+ L + Q + + D +F ++L L+Y+H +++RDLKP N+L+ + + DF
Sbjct: 117 YKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFG 173
Query: 242 LS 243
L+
Sbjct: 174 LA 175
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 34/133 (25%)
Query: 325 SFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVG 380
+V T Y APEI + +G+ ++D W+ G L E+L F G+ L ++G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 381 QP-----------------LRFPET---------PQVSFVARDLIRGLLVKEPHKRIAYK 414
P L P P A DL+ +L PHKRI +
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 415 RGATEIKQHPFFE 427
+ HP+ E
Sbjct: 310 QALA----HPYLE 318
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 66
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T + G L +R+ + N +Y + ++
Sbjct: 67 SVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 121
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 122 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 158
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 328 GTHEYLAPEIIRGEG---HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
G+ ++APE+IR + + D + FGI LYEL+ G P+ NR + +VG+
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 255
Query: 385 FPETPQV 391
P+ +V
Sbjct: 256 SPDLSKV 262
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTL 159
+R+G G G+VY + G A+K+++ + + +L + E +L H + L
Sbjct: 42 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 96
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
+ + T +V ++C G +L+ K F A + ++YLH I++
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIH 155
Query: 220 RDLKPENVLVRDEGHIMLSDFDLS 243
RDLK N+ + ++ + + DF L+
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 69
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T + G L +R+ + N +Y + ++
Sbjct: 70 SVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 124
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 125 EGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 161
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTL 159
+R+G G G+VY + G A+K+++ + + +L + E +L H + L
Sbjct: 14 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 68
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
+ + T +V ++C G +L+ K F A + ++YLH I++
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIH 127
Query: 220 RDLKPENVLVRDEGHIMLSDFDLS 243
RDLK N+ + ++ + + DF L+
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLA 151
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 328 GTHEYLAPEIIRGEG---HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
G+ ++APE+IR + + D + FGI LYEL+ G P+ NR + +VG+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 385 FPETPQV 391
P+ +V
Sbjct: 228 SPDLSKV 234
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 6/156 (3%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELR---GTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
I S ++ K +G G+ G V L+ A+K + KA + + +E I
Sbjct: 11 IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTDKQRR-DFLSEASI 68
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+G DHP + L K ++ E+ G+L + +K + FT +
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGMLRGIGS 127
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++YL + V+RDL N+LV +SDF +S
Sbjct: 128 GMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS 163
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ APE I SA D W++GI ++E++ +G P+ N+ + + + R P
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVIKAIEEGYRLP 239
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 62/152 (40%), Gaps = 7/152 (4%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRA--QTEREILGLLDH 153
+ ++ LG G G V L TN V KA LR+ Q E EIL L H
Sbjct: 11 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYH 70
Query: 154 PFLPTLYSYFET--DKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
+ E +K LVME+ G SLR P FA ++ + Y
Sbjct: 71 EHIVKYKGCCEDQGEKSVQLVMEYVPLG---SLRDYLPRHCVGLAQLLLFAQQICEGMAY 127
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
LH ++R L NVL+ ++ + + DF L+
Sbjct: 128 LHAQHYIHRALAARNVLLDNDRLVKIGDFGLA 159
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVEL---RGTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
IG + RLL++LG G G V E G A+K + L+ + E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ LDH L LY T +V E G+L +K + +R+ A +V
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY-AVQVAE 122
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL 242
+ YL ++RDL N+L+ + + DF L
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ APE ++ A D W FG+ L+E+ +G P+ G L + + R P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTL 159
+R+G G G+VY + G A+K+++ + + +L + E +L H + L
Sbjct: 14 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 68
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
+ + T +V ++C G +L+ K F A + ++YLH I++
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIH 127
Query: 220 RDLKPENVLVRDEGHIMLSDFDLS 243
RDLK N+ + ++ + + DF L+
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLA 151
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 328 GTHEYLAPEIIRGEG---HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
G+ ++APE+IR + + D + FGI LYEL+ G P+ NR + +VG+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 385 FPETPQV 391
P+ +V
Sbjct: 228 SPDLSKV 234
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 328 GTHEYLAPEIIRGEG---HGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNVVGQPLR 384
G+ ++APE+IR + + D + FGI LYEL+ G P+ NR + +VG+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 385 FPETPQV 391
P+ +V
Sbjct: 228 SPDLSKV 234
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTL 159
+R+G G G+VY + G A+K+++ + + +L + E +L H + L
Sbjct: 14 QRIGSGSFGTVYKGKWHGD---VAVKMLN-VTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 68
Query: 160 YSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVY 219
+ + T +V ++C G +L+ K F A + ++YLH I++
Sbjct: 69 FMGYSTAPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHAKSIIH 127
Query: 220 RDLKPENVLVRDEGHIMLSDFDLS 243
RDLK N+ + ++ + + DF L+
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 16/156 (10%)
Query: 94 SNFRLLKRLGYGDIGSVY------LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
+N + YG + S Y V +R + F + + +L LLR + E I
Sbjct: 30 TNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISP-FEHQTYCQRTLREIKILLRFRHE-NI 87
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+G+ D PT+ E K +V + +L+ L + Q + + D +F ++L
Sbjct: 88 IGINDIIRAPTI----EQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILR 139
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
L+Y+H +++RDLKP N+L+ + + DF L+
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 175
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 34/133 (25%)
Query: 325 SFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVG 380
+V T Y APEI + +G+ ++D W+ G L E+L F G+ L ++G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 381 QP-----------------LRFPET---------PQVSFVARDLIRGLLVKEPHKRIAYK 414
P L P P A DL+ +L PHKRI +
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 415 RGATEIKQHPFFE 427
+ HP+ E
Sbjct: 310 QALA----HPYLE 318
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVEL---RGTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
IG + RLL++LG G G V E G A+K + L+ + E
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ LDH L LY T +V E G+L +K + +R+ A +V
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY-AVQVAE 126
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL 242
+ YL ++RDL N+L+ + + DF L
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ APE ++ A D W FG+ L+E+ +G P+ G L + + R P
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 122 FAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL 181
F + + +L LLR + E I+G+ D PT+ E K +V + +L
Sbjct: 79 FEHQTYCQRTLREIKILLRFRHE-NIIGINDIIRAPTI----EQMKDVYIVQDLMET-DL 132
Query: 182 HSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFD 241
+ L + Q + + D +F ++L L+Y+H +++RDLKP N+L+ + + DF
Sbjct: 133 YKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 189
Query: 242 LS 243
L+
Sbjct: 190 LA 191
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 34/133 (25%)
Query: 325 SFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVG 380
+V T Y APEI + +G+ ++D W+ G L E+L F G+ L ++G
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 265
Query: 381 QP-----------------LRFPET---------PQVSFVARDLIRGLLVKEPHKRIAYK 414
P L P P A DL+ +L PHKRI +
Sbjct: 266 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 325
Query: 415 RGATEIKQHPFFE 427
+ HP+ E
Sbjct: 326 QALA----HPYLE 334
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 74
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T ++ G L +R+ + N +Y + ++
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 129
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDF 240
+ YL +V+RDL NVLV+ H+ ++DF
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 74
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T ++ G L +R+ + N +Y + ++
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 129
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDF 240
+ YL +V+RDL NVLV+ H+ ++DF
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVEL---RGTNTYFAMKVMDKASLASRNKLLRAQTEREI 147
IG + RLL++LG G G V E G A+K + L+ + E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+ LDH L LY T +V E G+L +K + +R+ A +V
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY-AVQVAE 122
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDL 242
+ YL ++RDL N+L+ + + DF L
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP---E 387
+ APE ++ A D W FG+ L+E+ +G P+ G L + + R P +
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
Query: 388 TPQ 390
PQ
Sbjct: 240 CPQ 242
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 14/154 (9%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 76
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T ++ G L +R+ + N +Y + ++
Sbjct: 77 SVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 131
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDF 240
+ YL +V+RDL NVLV+ H+ ++DF
Sbjct: 132 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 165
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 122 FAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL 181
F + + +L LLR + E I+G+ D PT+ E K +V + +L
Sbjct: 61 FEHQTYCQRTLREIKILLRFRHE-NIIGINDIIRAPTI----EQMKDVYIVQDLMET-DL 114
Query: 182 HSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFD 241
+ L + Q + + D +F ++L L+Y+H +++RDLKP N+L+ + + DF
Sbjct: 115 YKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 171
Query: 242 LS 243
L+
Sbjct: 172 LA 173
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 34/133 (25%)
Query: 325 SFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVG 380
+V T Y APEI + +G+ ++D W+ G L E+L F G+ L ++G
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 247
Query: 381 QP-----------------LRFPET---------PQVSFVARDLIRGLLVKEPHKRIAYK 414
P L P P A DL+ +L PHKRI +
Sbjct: 248 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 307
Query: 415 RGATEIKQHPFFE 427
+ HP+ E
Sbjct: 308 QALA----HPYLE 316
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 122 FAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL 181
F + + +L LLR + E I+G+ D PT+ E K +V + +L
Sbjct: 64 FEHQTYCQRTLREIKILLRFRHE-NIIGINDIIRAPTI----EQMKDVYIVQDLMET-DL 117
Query: 182 HSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFD 241
+ L + Q + + D +F ++L L+Y+H +++RDLKP N+L+ + + DF
Sbjct: 118 YKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 174
Query: 242 LS 243
L+
Sbjct: 175 LA 176
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 34/133 (25%)
Query: 325 SFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVG 380
+V T Y APEI + +G+ ++D W+ G L E+L F G+ L ++G
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 250
Query: 381 QP-----------------LRFPET---------PQVSFVARDLIRGLLVKEPHKRIAYK 414
P L P P A DL+ +L PHKRI +
Sbjct: 251 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 310
Query: 415 RGATEIKQHPFFE 427
+ HP+ E
Sbjct: 311 QALA----HPYLE 319
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 122 FAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL 181
F + + +L LLR + E I+G+ D PT+ E K +V + +L
Sbjct: 65 FEHQTYCQRTLREIKILLRFRHE-NIIGINDIIRAPTI----EQMKDVYIVQDLMET-DL 118
Query: 182 HSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFD 241
+ L + Q + + D +F ++L L+Y+H +++RDLKP N+L+ + + DF
Sbjct: 119 YKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 175
Query: 242 LS 243
L+
Sbjct: 176 LA 177
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 34/133 (25%)
Query: 325 SFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVG 380
+V T Y APEI + +G+ ++D W+ G L E+L F G+ L ++G
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 251
Query: 381 QP-----------------LRFPET---------PQVSFVARDLIRGLLVKEPHKRIAYK 414
P L P P A DL+ +L PHKRI +
Sbjct: 252 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 311
Query: 415 RGATEIKQHPFFE 427
+ HP+ E
Sbjct: 312 QALA----HPYLE 320
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 122 FAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL 181
F + + +L LLR + E I+G+ D PT+ E K +V + +L
Sbjct: 56 FEHQTYCQRTLREIKILLRFRHE-NIIGINDIIRAPTI----EQMKDVYIVQDLMET-DL 109
Query: 182 HSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFD 241
+ L + Q + + D +F ++L L+Y+H +++RDLKP N+L+ + + DF
Sbjct: 110 YKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 166
Query: 242 LS 243
L+
Sbjct: 167 LA 168
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 34/133 (25%)
Query: 325 SFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVG 380
+V T Y APEI + +G+ ++D W+ G L E+L F G+ L ++G
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 242
Query: 381 QP-----------------LRFPET---------PQVSFVARDLIRGLLVKEPHKRIAYK 414
P L P P A DL+ +L PHKRI +
Sbjct: 243 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 302
Query: 415 RGATEIKQHPFFE 427
+ HP+ E
Sbjct: 303 QALA----HPYLE 311
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 122 FAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL 181
F + + +L LLR + E I+G+ D PT+ E K +V + +L
Sbjct: 63 FEHQTYCQRTLREIKILLRFRHE-NIIGINDIIRAPTI----EQMKDVYIVQDLMET-DL 116
Query: 182 HSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFD 241
+ L + Q + + D +F ++L L+Y+H +++RDLKP N+L+ + + DF
Sbjct: 117 YKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 173
Query: 242 LS 243
L+
Sbjct: 174 LA 175
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 34/133 (25%)
Query: 325 SFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVG 380
+V T Y APEI + +G+ ++D W+ G L E+L F G+ L ++G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 381 QP-----------------LRFPET---------PQVSFVARDLIRGLLVKEPHKRIAYK 414
P L P P A DL+ +L PHKRI +
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 415 RGATEIKQHPFFE 427
+ HP+ E
Sbjct: 310 QALA----HPYLE 318
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 8/154 (5%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ + +K LG G G+VY + E A+K++++ + N + E I+
Sbjct: 15 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN--VEFMDEALIMA 72
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLAL 209
+DHP L L + + G L + + + N + ++ +
Sbjct: 73 SMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDN--IGSQLLLNWCVQIAKGM 130
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 131 MYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA 164
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 122 FAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL 181
F + + +L LLR + E I+G+ D PT+ E K +V + +L
Sbjct: 57 FEHQTYCQRTLREIKILLRFRHE-NIIGINDIIRAPTI----EQMKDVYIVQDLMET-DL 110
Query: 182 HSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFD 241
+ L + Q + + D +F ++L L+Y+H +++RDLKP N+L+ + + DF
Sbjct: 111 YKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 167
Query: 242 LS 243
L+
Sbjct: 168 LA 169
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 34/133 (25%)
Query: 325 SFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVG 380
+V T Y APEI + +G+ ++D W+ G L E+L F G+ L ++G
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 243
Query: 381 QP-----------------LRFPET---------PQVSFVARDLIRGLLVKEPHKRIAYK 414
P L P P A DL+ +L PHKRI +
Sbjct: 244 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 303
Query: 415 RGATEIKQHPFFE 427
+ HP+ E
Sbjct: 304 QALA----HPYLE 312
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 122 FAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL 181
F + + +L LLR + E I+G+ D PT+ E K +V + +L
Sbjct: 59 FEHQTYCQRTLREIKILLRFRHE-NIIGINDIIRAPTI----EQMKDVYIVQDLMET-DL 112
Query: 182 HSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFD 241
+ L + Q + + D +F ++L L+Y+H +++RDLKP N+L+ + + DF
Sbjct: 113 YKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 169
Query: 242 LS 243
L+
Sbjct: 170 LA 171
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 34/133 (25%)
Query: 325 SFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVG 380
+V T Y APEI + +G+ ++D W+ G L E+L F G+ L ++G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 381 QP-----------------LRFPET---------PQVSFVARDLIRGLLVKEPHKRIAYK 414
P L P P A DL+ +L PHKRI +
Sbjct: 246 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 415 RGATEIKQHPFFE 427
+ HP+ E
Sbjct: 306 QALA----HPYLE 314
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 122 FAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL 181
F + + +L LLR + E I+G+ D PT+ E K +V + +L
Sbjct: 63 FEHQTYCQRTLREIKILLRFRHE-NIIGINDIIRAPTI----EQMKDVYIVQDLMET-DL 116
Query: 182 HSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFD 241
+ L + Q + + D +F ++L L+Y+H +++RDLKP N+L+ + + DF
Sbjct: 117 YKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFG 173
Query: 242 LS 243
L+
Sbjct: 174 LA 175
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 34/133 (25%)
Query: 325 SFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVG 380
+V T Y APEI + +G+ ++D W+ G L E+L F G+ L ++G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 381 QP-----------------LRFPET---------PQVSFVARDLIRGLLVKEPHKRIAYK 414
P L P P A DL+ +L PHKRI +
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 415 RGATEIKQHPFFE 427
+ HP+ E
Sbjct: 310 QALA----HPYLE 318
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 190 NKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++ + D +F ++L L+Y+H +++RDLKP N+L+ + + DF L+
Sbjct: 138 SQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLA 191
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 34/131 (25%)
Query: 327 VGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVGQP 382
V T Y APEI + +G+ ++D W+ G L E+L F G+ L ++G P
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 267
Query: 383 LR-----------------FPETPQVSFV---------ARDLIRGLLVKEPHKRIAYKRG 416
+ P +V++ A DL+ +L P+KRI +
Sbjct: 268 SQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVE-- 325
Query: 417 ATEIKQHPFFE 427
E HP+ E
Sbjct: 326 --EALAHPYLE 334
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 122 FAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL 181
F + + +L LLR + E I+G+ D PT+ E K +V + +L
Sbjct: 63 FEHQTYCQRTLREIKILLRFRHE-NIIGINDIIRAPTI----EQMKDVYIVQDLMET-DL 116
Query: 182 HSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFD 241
+ L + Q + + D +F ++L L+Y+H +++RDLKP N+L+ + + DF
Sbjct: 117 YKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 173
Query: 242 LS 243
L+
Sbjct: 174 LA 175
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 49/131 (37%), Gaps = 34/131 (25%)
Query: 327 VGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVGQP 382
V T Y APEI + +G+ ++D W+ G L E+L F G+ L ++G P
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 383 -----------------LRFPET---------PQVSFVARDLIRGLLVKEPHKRIAYKRG 416
L P P A DL+ +L PHKRI ++
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 417 ATEIKQHPFFE 427
HP+ E
Sbjct: 312 LA----HPYLE 318
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 122 FAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL 181
F + + +L LLR + E I+G+ D PT+ E K +V + +L
Sbjct: 64 FEHQTYCQRTLREIKILLRFRHE-NIIGINDIIRAPTI----EQMKDVYIVQDLMET-DL 117
Query: 182 HSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFD 241
+ L + Q + + D +F ++L L+Y+H +++RDLKP N+L+ + + DF
Sbjct: 118 YKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 174
Query: 242 LS 243
L+
Sbjct: 175 LA 176
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 49/131 (37%), Gaps = 34/131 (25%)
Query: 327 VGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVGQP 382
V T Y APEI + +G+ ++D W+ G L E+L F G+ L ++G P
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 252
Query: 383 -----------------LRFPET---------PQVSFVARDLIRGLLVKEPHKRIAYKRG 416
L P P A DL+ +L PHKRI ++
Sbjct: 253 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 312
Query: 417 ATEIKQHPFFE 427
HP+ E
Sbjct: 313 LA----HPYLE 319
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%)
Query: 191 KYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
++ + D +F ++L L+Y+H +++RDLKP N+L+ + + DF L+
Sbjct: 123 QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 175
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 34/133 (25%)
Query: 325 SFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVG 380
+V T Y APEI + +G+ ++D W+ G L E+L F G+ L ++G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 381 QP-----------------LRFPET---------PQVSFVARDLIRGLLVKEPHKRIAYK 414
P L P P A DL+ +L PHKRI +
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 415 RGATEIKQHPFFE 427
+ HP+ E
Sbjct: 310 QALA----HPYLE 318
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 122 FAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL 181
F + + +L LLR + E I+G+ D PT+ E K +V + +L
Sbjct: 67 FEHQTYCQRTLREIKILLRFRHE-NIIGINDIIRAPTI----EQMKDVYIVQDLMET-DL 120
Query: 182 HSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFD 241
+ L + Q + + D +F ++L L+Y+H +++RDLKP N+L+ + + DF
Sbjct: 121 YKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 177
Query: 242 LS 243
L+
Sbjct: 178 LA 179
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 34/133 (25%)
Query: 325 SFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVG 380
+V T Y APEI + +G+ ++D W+ G L E+L F G+ L ++G
Sbjct: 194 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 253
Query: 381 QP-----------------LRFPET---------PQVSFVARDLIRGLLVKEPHKRIAYK 414
P L P P A DL+ +L PHKRI +
Sbjct: 254 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 313
Query: 415 RGATEIKQHPFFE 427
+ HP+ E
Sbjct: 314 QALA----HPYLE 322
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 122 FAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL 181
F + + +L LLR + E I+G+ D PT+ E K +V + +L
Sbjct: 59 FEHQTYCQRTLREIKILLRFRHE-NIIGINDIIRAPTI----EQMKDVYIVQDLMET-DL 112
Query: 182 HSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFD 241
+ L + Q + + D +F ++L L+Y+H +++RDLKP N+L+ + + DF
Sbjct: 113 YKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 169
Query: 242 LS 243
L+
Sbjct: 170 LA 171
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 34/133 (25%)
Query: 325 SFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVG 380
+V T Y APEI + +G+ ++D W+ G L E+L F G+ L ++G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 381 QP-----------------LRFPET---------PQVSFVARDLIRGLLVKEPHKRIAYK 414
P L P P A DL+ +L PHKRI +
Sbjct: 246 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 415 RGATEIKQHPFFE 427
+ HP+ E
Sbjct: 306 QALA----HPYLE 314
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 122 FAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL 181
F + + +L LLR + E I+G+ D PT+ E K +V + +L
Sbjct: 59 FEHQTYCQRTLREIKILLRFRHE-NIIGINDIIRAPTI----EQMKDVYIVQDLMET-DL 112
Query: 182 HSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFD 241
+ L + Q + + D +F ++L L+Y+H +++RDLKP N+L+ + + DF
Sbjct: 113 YKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFG 169
Query: 242 LS 243
L+
Sbjct: 170 LA 171
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 34/133 (25%)
Query: 325 SFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVG 380
+V T Y APEI + +G+ ++D W+ G L E+L F G+ L ++G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 381 QP-----------------LRFPET---------PQVSFVARDLIRGLLVKEPHKRIAYK 414
P L P P A DL+ +L PHKRI +
Sbjct: 246 SPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 415 RGATEIKQHPFFE 427
+ HP+ E
Sbjct: 306 QALA----HPYLE 314
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 122 FAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL 181
F + + +L LLR + E I+G+ D PT+ E K +V + +L
Sbjct: 59 FEHQTYCQRTLREIKILLRFRHE-NIIGINDIIRAPTI----EQMKDVYIVQDLMET-DL 112
Query: 182 HSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFD 241
+ L + Q + + D +F ++L L+Y+H +++RDLKP N+L+ + + DF
Sbjct: 113 YKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFG 169
Query: 242 LS 243
L+
Sbjct: 170 LA 171
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 34/133 (25%)
Query: 325 SFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVG 380
+V T Y APEI + +G+ ++D W+ G L E+L F G+ L ++G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 381 QP-----------------LRFPET---------PQVSFVARDLIRGLLVKEPHKRIAYK 414
P L P P A DL+ +L PHKRI +
Sbjct: 246 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 415 RGATEIKQHPFFE 427
+ HP+ E
Sbjct: 306 QALA----HPYLE 314
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 8/174 (4%)
Query: 75 DVRWDAINMISLRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLAS 134
+V + SLR + NF LG G G VY L T A+K + +
Sbjct: 19 EVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERXQG 77
Query: 135 RNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFT 194
L+ QTE E++ + H L L + T LV + + G++ S +++P
Sbjct: 78 GE--LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP 135
Query: 195 ED--AARFFASEVLLALEYLHML---GIVYRDLKPENVLVRDEGHIMLSDFDLS 243
D + A L YLH I++RD+K N+L+ +E ++ DF L+
Sbjct: 136 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 189
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 10/155 (6%)
Query: 94 SNFRLLKRLGYGDIGSVY--LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLL 151
+ F+ +K LG G G+VY L G + +M+ S E ++ +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVLLA 208
D+P + L T + G L +R+ + N +Y + ++
Sbjct: 109 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIAKG 163
Query: 209 LEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 164 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 198
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
SDFG + L E ++PT S+ + APE I SA D W++GI ++E++
Sbjct: 160 SDFG--LSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 217
Query: 361 H-GTTPFKGQGNRATLFNVVGQPLRFPETP 389
G P+ N+ + N + Q R P P
Sbjct: 218 SFGERPYWDMSNQ-DVINAIEQDYRLPPPP 246
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 6/156 (3%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRG---TNTYFAMKVMDKASLASRNKLLRAQTEREI 147
I +S ++ + +G G+ G V L+ + A+K + K R + +E I
Sbjct: 13 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRR-EFLSEASI 70
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+G +HP + L ++ EF G L S + + FT +
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQLVGMLRGIAS 129
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL + V+RDL N+LV +SDF LS
Sbjct: 130 GMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS 165
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 14/154 (9%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 79
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T + G L +R+ + N +Y + ++
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 134
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDF 240
+ YL +V+RDL NVLV+ H+ ++DF
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 168
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 14/154 (9%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 74
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T + G L +R+ + N +Y + ++
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 129
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDF 240
+ YL +V+RDL NVLV+ H+ ++DF
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 122 FAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL 181
F + + +L LLR + E I+G+ D PT+ E K +V + +L
Sbjct: 59 FEHQTYCQRTLREIKILLRFRHE-NIIGINDIIRAPTI----EQMKDVYIVQDLMET-DL 112
Query: 182 HSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFD 241
+ L + Q + + D +F ++L L+Y+H +++RDLKP N+L+ + + DF
Sbjct: 113 YKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFG 169
Query: 242 LS 243
L+
Sbjct: 170 LA 171
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 34/133 (25%)
Query: 325 SFVGTHEYLAPEI-IRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL---FNVVG 380
+V T Y APEI + +G+ ++D W+ G L E+L F G+ L ++G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 381 QP-----------------LRFPET---------PQVSFVARDLIRGLLVKEPHKRIAYK 414
P L P P A DL+ +L PHKRI +
Sbjct: 246 SPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 415 RGATEIKQHPFFE 427
+ HP+ E
Sbjct: 306 QALA----HPYLE 314
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 14/154 (9%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K LG G G+VY + E A+K + +A+ NK E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 72
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T + G L +R+ + N +Y + ++
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 127
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDF 240
+ YL +V+RDL NVLV+ H+ ++DF
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 161
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 8/162 (4%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ R +K LG G G+VY + + A+KV+ + + NK E ++
Sbjct: 17 TELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANK--EILDEAYVMA 74
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLAL 209
+ P++ L T + G L +R+ + + ++D + ++ +
Sbjct: 75 GVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENR-GRLGSQDLLNW-CMQIAKGM 132
Query: 210 EYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPT 251
YL + +V+RDL NVLV+ H+ ++DF L+ + T
Sbjct: 133 SYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET 174
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 193 FTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDE 232
T+ R++ E+L AL+Y H GI++RD+KP NV++ E
Sbjct: 143 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 182
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 63/158 (39%), Gaps = 19/158 (12%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPF 155
+ ++ LG G G V L TN V KA A R+ ++EI
Sbjct: 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEI------DI 86
Query: 156 LPTLY-SYFETDKFYC---------LVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEV 205
L TLY + K C LVME+ G SLR P FA ++
Sbjct: 87 LRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLG---SLRDYLPRHSIGLAQLLLFAQQI 143
Query: 206 LLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YLH ++RDL NVL+ ++ + + DF L+
Sbjct: 144 CEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLA 181
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+ APE ++ A D W+FG+ LYELL
Sbjct: 203 WYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 193 FTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDE 232
T+ R++ E+L AL+Y H GI++RD+KP NV++ E
Sbjct: 123 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 162
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 193 FTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDE 232
T+ R++ E+L AL+Y H GI++RD+KP NV++ E
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 193 FTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDE 232
T+ R++ E+L AL+Y H GI++RD+KP NV++ E
Sbjct: 124 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 163
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 193 FTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDE 232
T+ R++ E+L AL+Y H GI++RD+KP NV++ E
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 193 FTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDE 232
T+ R++ E+L AL+Y H GI++RD+KP NV++ E
Sbjct: 123 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 162
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 193 FTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDE 232
T+ R++ E+L AL+Y H GI++RD+KP NV++ E
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 193 FTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDE 232
T+ R++ E+L AL+Y H GI++RD+KP NV++ E
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 96 FRLLKRLGYGDIGSV-----YLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+L K LG G G V + ++ T A+K++ + + S ++ L +E +IL
Sbjct: 20 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL--MSELKILIH 77
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQ----PNKYFTEDAARFFAS 203
+ H + L + + +++EFC GNL + LR K+ P K ED + F +
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 204 ---------EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVK 254
+V +E+L ++RDL N+L+ ++ + + DF L+ P V+
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 276 AVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAP 335
A C+ IL S+KN DFG ++ +P VR +++AP
Sbjct: 156 ASRKCIHRDLAARNILLSEKNVVKICDFG-----LARDIXKDPDXVRKGDARLPLKWMAP 210
Query: 336 EIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKG 368
E I + D W+FG+ L+E+ G +P+ G
Sbjct: 211 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 193 FTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDE 232
T+ R++ E+L AL+Y H GI++RD+KP NV++ E
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 193 FTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDE 232
T+ R++ E+L AL+Y H GI++RD+KP NV++ E
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 96 FRLLKRLGYGDIGSV-----YLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+L K LG G G V + ++ T A+K++ + + S ++ L +E +IL
Sbjct: 29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL--MSELKILIH 86
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQ----PNKYFTEDAARFFAS 203
+ H + L + + +++EFC GNL + LR K+ P K ED + F +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 204 ---------EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVK 254
+V +E+L ++RDL N+L+ ++ + + DF L+ P V+
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 276 AVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAP 335
A C+ IL S+KN DFG ++ +P VR +++AP
Sbjct: 165 ASRKCIHRDLAARNILLSEKNVVKICDFG-----LARDIXKDPDXVRKGDARLPLKWMAP 219
Query: 336 EIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKG 368
E I + D W+FG+ L+E+ G +P+ G
Sbjct: 220 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 18/167 (10%)
Query: 88 GPPIGLSNFRLLKR--LGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTER 145
G + L RL R L G VY + G+ +A+K + L++ + RA +
Sbjct: 20 GQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRL----LSNEEEKNRAIIQE 75
Query: 146 EIL--GLLDHPFLPTLYSYFETDKF--------YCLVMEFCSGGNLHSLRQKQPNKYFTE 195
L HP + S K + L+ E C G + L++ + +
Sbjct: 76 VCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSC 135
Query: 196 DAARFFASEVLLALEYLHMLG--IVYRDLKPENVLVRDEGHIMLSDF 240
D + A++++H I++RDLK EN+L+ ++G I L DF
Sbjct: 136 DTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDF 182
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K L G G+VY + E A+K + +A+ NK E ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 79
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T ++ G L +R+ + N +Y + ++
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 134
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 301 SDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
SDFG + L E ++PT S+ + APE I SA D W++GI ++E++
Sbjct: 158 SDFG--LSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 215
Query: 361 H-GTTPFKGQGNRATLFNVVGQPLRFPETPQVSFVARDLIRGLLVKEPHKR 410
G P+ N+ + N + Q R P P L+ K+ + R
Sbjct: 216 SFGERPYWDMSNQ-DVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNAR 265
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 6/156 (3%)
Query: 91 IGLSNFRLLKRLGYGDIGSVYLVELRG---TNTYFAMKVMDKASLASRNKLLRAQTEREI 147
I +S ++ + +G G+ G V L+ + A+K + K R + +E I
Sbjct: 11 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRR-EFLSEASI 68
Query: 148 LGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLL 207
+G +HP + L ++ EF G L S + + FT +
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQLVGMLRGIAS 127
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL + V+RDL N+LV +SDF LS
Sbjct: 128 GMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS 163
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELR---GTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
F L + LG G+ GSV +L+ G+ A+K++ KA + + + + E +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML-KADIIASSDIEEFLREAACMKE 81
Query: 151 LDHPFLPTLYSYFETDKFY------CLVMEFCSGGNLHSLRQ-----KQPNKYFTEDAAR 199
DHP + L + +++ F G+LH+ + P + R
Sbjct: 82 FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR 141
Query: 200 FFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
F ++ +EYL ++RDL N ++ ++ + ++DF LS
Sbjct: 142 FMV-DIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLS 184
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFPETP 389
++LA E + + D W FG+ ++E++ G TP+ G N A ++N + R + P
Sbjct: 204 KWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-AEIYNYLIGGNRLKQPP 262
Query: 390 QVSFVARDLIRGLLVKEPHKR 410
+ DL+ +P +R
Sbjct: 263 ECMEEVYDLMYQCWSADPKQR 283
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 14/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K L G G+VY + E A+K + +A+ NK E ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 79
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T + G L +R+ + N +Y + ++
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 134
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 7/152 (4%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRA--QTEREILGLLDH 153
+ ++ LG G G V L TN V KA A R+ + E +IL L H
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYH 75
Query: 154 PFLPTLYSYFET--DKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
+ E +K LVME+ G SLR P FA ++ + Y
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLG---SLRDYLPRHSIGLAQLLLFAQQICEGMAY 132
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
LH ++R+L NVL+ ++ + + DF L+
Sbjct: 133 LHAQHYIHRNLAARNVLLDNDRLVKIGDFGLA 164
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+ APE ++ A D W+FG+ LYELL
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 96 FRLLKRLGYGDIGSV-----YLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+L K LG G G V + ++ T A+K++ + + S ++ L +E +IL
Sbjct: 31 LKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRAL--MSELKILIH 88
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNK---YFTEDAARFFAS-- 203
+ H + L + + +++EFC GNL + + + N+ Y ED + F +
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLE 148
Query: 204 -------EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVK 254
+V +E+L ++RDL N+L+ ++ + + DF L+ P V+
Sbjct: 149 HLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
IL S+KN DFG ++ +P VR +++APE I + D
Sbjct: 179 ILLSEKNVVKICDFG-----LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 350 WTFGIFLYELLH-GTTPFKG 368
W+FG+ L+E+ G +P+ G
Sbjct: 234 WSFGVLLWEIFSLGASPYPG 253
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 14/157 (8%)
Query: 94 SNFRLLKRLGYGDIGSVY----LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILG 149
+ F+ +K L G G+VY + E A+K + +A+ NK E ++
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMA 72
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPN---KYFTEDAARFFASEVL 206
+D+P + L T + G L +R+ + N +Y + ++
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-----WCVQIA 127
Query: 207 LALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ YL +V+RDL NVLV+ H+ ++DF L+
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKGQGNRATLFNVVGQPLRFPETP 389
+++APE I + D W++GIFL+EL G++P+ G + + ++ + R
Sbjct: 212 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 271
Query: 390 QVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQH 423
D+++ +P KR +K+ I++
Sbjct: 272 HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKGQGNRATLFNVVGQPLRFPETP 389
+++APE I + D W++GIFL+EL G++P+ G + + ++ + R
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 390 QVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQH 423
D+++ +P KR +K+ I++
Sbjct: 295 HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 328
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKGQGNRATLFNVVGQPLRFPETP 389
+++APE I + D W++GIFL+EL G++P+ G + + ++ + R
Sbjct: 228 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 287
Query: 390 QVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQH 423
D+++ +P KR +K+ I++
Sbjct: 288 HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 321
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 13/156 (8%)
Query: 100 KRLGYGDIGSVYLVELR---GTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFL 156
K LG G+ GSV L+ GT+ A+K M K +S+ ++ +E + HP +
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTM-KLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 157 PTLYSYFETDKFY-----CLVMEFCSGGNLHSL----RQKQPNKYFTEDAARFFASEVLL 207
L +++ F G+LH+ R + K+ F ++ L
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 208 ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL N ++RD+ + ++DF LS
Sbjct: 159 GMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLS 194
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKGQGNRATLFNVVGQPLRFPETP 389
+++APE I + D W++GIFL+EL G++P+ G + + ++ + R
Sbjct: 230 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 289
Query: 390 QVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQH 423
D+++ +P KR +K+ I++
Sbjct: 290 HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 323
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 96 FRLLKRLGYGDIGSV-----YLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+L K LG G G V + ++ T A+K++ + + S ++ L +E +IL
Sbjct: 20 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL--MSELKILIH 77
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQ----PNKYFTEDAARFFAS 203
+ H + L + + ++ EFC GNL + LR K+ P K ED + F +
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 204 ---------EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVK 254
+V +E+L ++RDL N+L+ ++ + + DF L+ P V+
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 276 AVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAP 335
A C+ IL S+KN DFG ++ +P VR +++AP
Sbjct: 156 ASRKCIHRDLAARNILLSEKNVVKICDFG-----LARDIXKDPDXVRKGDARLPLKWMAP 210
Query: 336 EIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKG 368
E I + D W+FG+ L+E+ G +P+ G
Sbjct: 211 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKGQGNRATLFNVVGQPLRFPETP 389
+++APE I + D W++GIFL+EL G++P+ G + + ++ + R
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 390 QVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQH 423
D+++ +P KR +K+ I++
Sbjct: 295 HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 328
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 7/152 (4%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRA--QTEREILGLLDH 153
+ ++ LG G G V L TN V KA A R+ + E +IL L H
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYH 75
Query: 154 PFLPTLYSYFET--DKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
+ E +K LVME+ G SLR P FA ++ + Y
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLG---SLRDYLPRHSIGLAQLLLFAQQICEGMAY 132
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
LH ++R+L NVL+ ++ + + DF L+
Sbjct: 133 LHSQHYIHRNLAARNVLLDNDRLVKIGDFGLA 164
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL 360
+ APE ++ A D W+FG+ LYELL
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 96 FRLLKRLGYGDIGSV-----YLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+L K LG G G V + ++ T A+K++ + + S ++ L +E +IL
Sbjct: 29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL--MSELKILIH 86
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQ----PNKYFTEDAARFFAS 203
+ H + L + + +++EFC GNL + LR K+ P K ED + F +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 204 ---------EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVK 254
+V +E+L ++RDL N+L+ ++ + + DF L+ P V+
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 276 AVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAP 335
A C+ IL S+KN DFG ++ +P VR +++AP
Sbjct: 165 ASRKCIHRDLAARNILLSEKNVVKICDFG-----LARDIYKDPDXVRKGDARLPLKWMAP 219
Query: 336 EIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKG 368
E I + D W+FG+ L+E+ G +P+ G
Sbjct: 220 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 6/146 (4%)
Query: 98 LLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLP 157
LLK LG G G V L + +G A+K++ + S++ AQT + L HP L
Sbjct: 12 LLKELGSGQFGVVKLGKWKGQYD-VAVKMIKEGSMSEDEFFQEAQT----MMKLSHPKLV 66
Query: 158 TLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGI 217
Y + +V E+ S G L + + K +V + +L
Sbjct: 67 KFYGVCSKEYPIYIVTEYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQF 125
Query: 218 VYRDLKPENVLVRDEGHIMLSDFDLS 243
++RDL N LV + + +SDF ++
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMT 151
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 96 FRLLKRLGYGDIGSV-----YLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+L K LG G G V + ++ T A+K++ + + S ++ L +E +IL
Sbjct: 66 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL--MSELKILIH 123
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQ----PNKYFTEDAARFFAS 203
+ H + L + + +++EFC GNL + LR K+ P K ED + F +
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 183
Query: 204 ---------EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVK 254
+V +E+L ++RDL N+L+ ++ + + DF L+ P V+
Sbjct: 184 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 276 AVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAP 335
A C+ IL S+KN DFG ++ +P VR +++AP
Sbjct: 202 ASRKCIHRDLAARNILLSEKNVVKICDFG-----LARDIYKDPDYVRKGDARLPLKWMAP 256
Query: 336 EIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKG 368
E I + D W+FG+ L+E+ G +P+ G
Sbjct: 257 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 97/284 (34%), Gaps = 60/284 (21%)
Query: 96 FRLLKRLGYGDIGSVY--LVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL-LD 152
+ ++ LG G G V L RG + A+K++ L ++I +
Sbjct: 21 YEIVGNLGEGTFGKVVECLDHARG-KSQVALKIIRNVGKYREAARLEINVLKKIKEKDKE 79
Query: 153 HPFLPTLYS-YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEY 211
+ FL L S +F C+ E L++ Y R A ++ AL +
Sbjct: 80 NKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPY-PLPHVRHMAYQLCHALRF 138
Query: 212 LHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXIL 271
LH + + DLKPEN+L + S+F+ L
Sbjct: 139 LHENQLTHTDLKPENILFVN------SEFE----------------------------TL 164
Query: 272 NDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHE 331
+E+ C + S K +DFG A + + V T
Sbjct: 165 YNEHK--SCEEKSV--------KNTSIRVADFGS----------ATFDHEHHTTIVATRH 204
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL 375
Y PE+I G D W+ G L+E G T F+ NR L
Sbjct: 205 YRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 96 FRLLKRLGYGDIGSV-----YLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+L K LG G G V + ++ T A+K++ + + S ++ L +E +IL
Sbjct: 29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL--MSELKILIH 86
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQ----PNKYFTEDAARFFAS 203
+ H + L + + +++EFC GNL + LR K+ P K ED + F +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 204 ---------EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVK 254
+V +E+L ++RDL N+L+ ++ + + DF L+ P V+
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 276 AVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAP 335
A C+ IL S+KN DFG ++ +P VR +++AP
Sbjct: 165 ASRKCIHRDLAARNILLSEKNVVKICDFG-----LARDIYKDPDYVRKGDARLPLKWMAP 219
Query: 336 EIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKG 368
E I + D W+FG+ L+E+ G +P+ G
Sbjct: 220 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 24/168 (14%)
Query: 98 LLKRLGYGDIGSVYLVELRGTN-------TYFAMKVMDKASLASRNKLLRAQTEREILGL 150
L K LG G G V + E G + A+K++ A+ L +E E++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKM 96
Query: 151 L-DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQP-NKYFTEDAARFFASEVLL 207
+ H + TL D +++E+ S GNL LR ++P ++ D R ++
Sbjct: 97 IGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 208 ------------ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL NVLV + + ++DF L+
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Query: 89 PPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREIL 148
P +G + FRL +++G G G +YL TN A+K ++ L ++ R +
Sbjct: 3 PRVG-NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LENVKTKHPQLLYESKIYRILQ 60
Query: 149 GLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLA 208
G +P + + + LVM+ G +L L K + A +++
Sbjct: 61 GGTG---IPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRK-LSLKTVLMLADQMINR 115
Query: 209 LEYLHMLGIVYRDLKPENVLV---RDEGHIMLSDFDLS 243
+E++H ++RD+KP+N L+ R + + DF L+
Sbjct: 116 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 96 FRLLKRLGYGDIGSV-----YLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+L K LG G G V + ++ T A+K++ + + S ++ L +E +IL
Sbjct: 31 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL--MSELKILIH 88
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQ----PNKYFTEDAARFFAS 203
+ H + L + + +++EFC GNL + LR K+ P K ED + F +
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLT 148
Query: 204 ---------EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVK 254
+V +E+L ++RDL N+L+ ++ + + DF L+ P V+
Sbjct: 149 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 208
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 276 AVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAP 335
A C+ IL S+KN DFG ++ +P VR +++AP
Sbjct: 167 ASRKCIHRDLAARNILLSEKNVVKICDFG-----LARDIYKDPDYVRKGDARLPLKWMAP 221
Query: 336 EIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKG 368
E I + D W+FG+ L+E+ G +P+ G
Sbjct: 222 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 255
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 76/225 (33%), Gaps = 56/225 (24%)
Query: 152 DHPFLPTLYS-YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
++ FL L S +F C+ E L++ Y R A ++ AL
Sbjct: 88 ENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPY-PLPHVRHMAYQLCHALR 146
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXI 270
+LH + + DLKPEN+L + S+F+
Sbjct: 147 FLHENQLTHTDLKPENILFVN------SEFE----------------------------T 172
Query: 271 LNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTH 330
L +E+ C + S K +DFG A + + V T
Sbjct: 173 LYNEHK--SCEEKSV--------KNTSIRVADFGS----------ATFDHEHHTTIVATR 212
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL 375
Y PE+I G D W+ G L+E G T F+ NR L
Sbjct: 213 HYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 257
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 8/174 (4%)
Query: 75 DVRWDAINMISLRGPPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLAS 134
+V + SLR + NF LG G G VY L A+K + + +
Sbjct: 11 EVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRL-ADGXLVAVKRLKEER--T 67
Query: 135 RNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFT 194
+ L+ QTE E++ + H L L + T LV + + G++ S +++P
Sbjct: 68 QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP 127
Query: 195 ED--AARFFASEVLLALEYLHML---GIVYRDLKPENVLVRDEGHIMLSDFDLS 243
D + A L YLH I++RD+K N+L+ +E ++ DF L+
Sbjct: 128 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 181
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 96 FRLLKRLGYGDIGSV-----YLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+L K LG G G V + ++ T A+K++ + + S ++ L +E +IL
Sbjct: 20 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL--MSELKILIH 77
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQ----PNKYFTEDAARFFAS 203
+ H + L + + ++ EFC GNL + LR K+ P K ED + F +
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 204 ---------EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVK 254
+V +E+L ++RDL N+L+ ++ + + DF L+ P V+
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 276 AVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAP 335
A C+ IL S+KN DFG ++ +P VR +++AP
Sbjct: 156 ASRKCIHRDLAARNILLSEKNVVKICDFG-----LARDIYKDPDYVRKGDARLPLKWMAP 210
Query: 336 EIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKG 368
E I + D W+FG+ L+E+ G +P+ G
Sbjct: 211 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 29/177 (16%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTY-----FAMKVMDKASLASRNKLLRAQTEREIL 148
+N ++ +G G G V+ G Y A+K++ + AS + Q E ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE--ASADMQADFQREAALM 104
Query: 149 GLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQPNKYFT------EDAARF- 200
D+P + L K CL+ E+ + G+L+ LR P+ + AR
Sbjct: 105 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 164
Query: 201 --------------FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
A +V + YL V+RDL N LV + + ++DF LS
Sbjct: 165 SPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLS 221
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 76/225 (33%), Gaps = 56/225 (24%)
Query: 152 DHPFLPTLYS-YFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALE 210
++ FL L S +F C+ E L++ Y R A ++ AL
Sbjct: 111 ENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPY-PLPHVRHMAYQLCHALR 169
Query: 211 YLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKXXXXXXXXXXXXXXXI 270
+LH + + DLKPEN+L + S+F+
Sbjct: 170 FLHENQLTHTDLKPENILFVN------SEFE----------------------------T 195
Query: 271 LNDEYAVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTH 330
L +E+ C + S K +DFG A + + V T
Sbjct: 196 LYNEHK--SCEEKSV--------KNTSIRVADFGS----------ATFDHEHHTTIVATR 235
Query: 331 EYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL 375
Y PE+I G D W+ G L+E G T F+ NR L
Sbjct: 236 HYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 280
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 96 FRLLKRLGYGDIGSV-----YLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGL 150
+L K LG G G V + ++ T A+K++ + + S ++ L +E +IL
Sbjct: 20 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL--MSELKILIH 77
Query: 151 LDHPF--LPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQ----PNKYFTEDAARFFAS 203
+ H + L + + ++ EFC GNL + LR K+ P K ED + F +
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 204 ---------EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVK 254
+V +E+L ++RDL N+L+ ++ + + DF L+ P V+
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 276 AVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAP 335
A C+ IL S+KN DFG ++ +P VR +++AP
Sbjct: 156 ASRKCIHRDLAARNILLSEKNVVKICDFG-----LARDIYKDPDYVRKGDARLPLKWMAP 210
Query: 336 EIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKG 368
E I + D W+FG+ L+E+ G +P+ G
Sbjct: 211 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 69/178 (38%), Gaps = 33/178 (18%)
Query: 95 NFRLLKRLGYGDIGSV-----YLVELRGTNTYFAMKVM-DKASLASRNKLLRAQTEREIL 148
N K LG G G V Y + G + A+K++ +KA + R L+ L
Sbjct: 46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 149 GLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNL-HSLRQKQPNKYFTEDAARF------- 200
G H + L L+ E+C G+L + LR K+ F+ED +
Sbjct: 106 G--SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREK--FSEDEIEYENQKRLE 161
Query: 201 ---------------FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
FA +V +E+L V+RDL NVLV + + DF L+
Sbjct: 162 EEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLA 219
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 15/143 (10%)
Query: 101 RLGYGDIGSVYLVELRGTNTY--FAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPT 158
++G G G VY + + +A+K ++ ++ + A E +L L HP + +
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS-----MSACREIALLRELKHPNVIS 82
Query: 159 LYSYF--ETDKFYCLVMEFCSGGNLHSL---RQKQPNK---YFTEDAARFFASEVLLALE 210
L F D+ L+ ++ H + R + NK + ++L +
Sbjct: 83 LQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH 142
Query: 211 YLHMLGIVYRDLKPENVLVRDEG 233
YLH +++RDLKP N+LV EG
Sbjct: 143 YLHANWVLHRDLKPANILVMGEG 165
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 20/148 (13%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRN-----KLLRAQTERE---- 146
+ ++++LG+G +V+L + AMKV+ A + KLL+ E +
Sbjct: 33 YHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSDP 92
Query: 147 ----ILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFA 202
++ L+D + + C+V E G +L K + +
Sbjct: 93 NKDMVVQLIDDFKISGMNGIH-----VCMVFEVL-GHHLLKWIIKSNYQGLPVRCVKSII 146
Query: 203 SEVLLALEYLH-MLGIVYRDLKPENVLV 229
+VL L+YLH I++ D+KPEN+L+
Sbjct: 147 RQVLQGLDYLHSKCKIIHTDIKPENILM 174
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 64/170 (37%), Gaps = 15/170 (8%)
Query: 89 PPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREIL 148
P + ++ + +G G+ G V ++ + AS++ E E+L
Sbjct: 20 PVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVL 79
Query: 149 GLLDH-PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQ--------------PNKYF 193
L H P + L E + L +E+ GNL +K
Sbjct: 80 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 139
Query: 194 TEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ FA++V ++YL ++RDL N+LV + ++DF LS
Sbjct: 140 SSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 189
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKGQGNRATLFNVVGQPLRFPETPQ 390
++A E + + + D W++G+ L+E++ G TP+ G A L+ + Q R +
Sbjct: 207 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-TCAELYEKLPQGYRLEKPLN 265
Query: 391 VSFVARDLIRGLLVKEPHKR 410
DL+R ++P++R
Sbjct: 266 CDDEVYDLMRQCWREKPYER 285
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 276 AVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAP 335
A C+ IL S+KN DFG ++ +P VR +++AP
Sbjct: 165 ASRKCIHRDLAARNILLSEKNVVKICDFG-----LARDIXKDPDXVRKGDARLPLKWMAP 219
Query: 336 EIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKG 368
E I + D W+FG+ L+E+ G +P+ G
Sbjct: 220 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 79/177 (44%), Gaps = 22/177 (12%)
Query: 98 LLKRLGYGDIGSV-----YLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLD 152
L K LG G G V + ++ T A+K++ + + S ++ L +E +IL +
Sbjct: 32 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL--MSELKILIHIG 89
Query: 153 HPF--LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFT----EDAARFFAS--- 203
H + L + + +++EFC GNL + + + N++ ED + F +
Sbjct: 90 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEH 149
Query: 204 ------EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVK 254
+V +E+L ++RDL N+L+ ++ + + DF L+ P V+
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 64/170 (37%), Gaps = 15/170 (8%)
Query: 89 PPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREIL 148
P + ++ + +G G+ G V ++ + AS++ E E+L
Sbjct: 10 PVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVL 69
Query: 149 GLLDH-PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQ--------------PNKYF 193
L H P + L E + L +E+ GNL +K
Sbjct: 70 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 129
Query: 194 TEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ FA++V ++YL ++RDL N+LV + ++DF LS
Sbjct: 130 SSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 179
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKGQGNRATLFNVVGQPLRFPETPQ 390
++A E + + + D W++G+ L+E++ G TP+ G A L+ + Q R +
Sbjct: 197 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-TCAELYEKLPQGYRLEKPLN 255
Query: 391 VSFVARDLIRGLLVKEPHKR 410
DL+R ++P++R
Sbjct: 256 CDDEVYDLMRQCWREKPYER 275
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 98 LLKRLGYGDIGSVYLVELRGTN-------TYFAMKVMDKASLASRNKLLRAQTEREILGL 150
L K LG G G V + E G + A+K++ A+ L +E E++ +
Sbjct: 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKM 142
Query: 151 L-DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQP-NKYFTEDAARFFASEVLL 207
+ H + L D +++E+ S GNL LR ++P ++ D R ++
Sbjct: 143 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 202
Query: 208 ------------ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL NVLV + + ++DF L+
Sbjct: 203 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 250
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 276 AVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAP 335
A C+ IL S+KN DFG ++ +P VR +++AP
Sbjct: 215 ASRKCIHRDLAARNILLSEKNVVKICDFG-----LARDIYKDPDYVRKGDARLPLKWMAP 269
Query: 336 EIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKG 368
E I + D W+FG+ L+E+ G +P+ G
Sbjct: 270 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 303
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 201 FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVK 254
++ +V +E+L ++RDL N+L+ ++ + + DF L+ P V+
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 256
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 24/51 (47%)
Query: 325 SFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATL 375
+ V T Y APE+I G D W+ G ++E G T F+ NR L
Sbjct: 212 TIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHL 262
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 276 AVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAP 335
A C+ IL S+KN DFG ++ +P VR +++AP
Sbjct: 217 ASRKCIHRDLAARNILLSEKNVVKICDFG-----LARDIYKDPDYVRKGDARLPLKWMAP 271
Query: 336 EIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKG 368
E I + D W+FG+ L+E+ G +P+ G
Sbjct: 272 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 305
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 201 FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVK 254
++ +V +E+L ++RDL N+L+ ++ + + DF L+ P V+
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 258
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 40/166 (24%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEG-HGSAVD 348
++ SK N DFG A + +EP S++ + + Y APE++ G + ++D
Sbjct: 173 LVNSKDNTLKLCDFG----SAKKLIPSEP----SVAXICSRFYRAPELMLGATEYTPSID 224
Query: 349 WWTFGIFLYELLHGTTPFKGQGNRATLFNVV---GQP--------------LRFPETPQV 391
W+ G EL+ G F G+ + L ++ G P +RFP
Sbjct: 225 LWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAK 284
Query: 392 SF----------VARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFE 427
+ +A DL+ +L EP RI E HPFF+
Sbjct: 285 DWRKILPEGTPSLAIDLLEQILRYEPDLRI----NPYEAMAHPFFD 326
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 74/187 (39%), Gaps = 51/187 (27%)
Query: 96 FRLLKRLGYGDIGSVYLVELRGTNTYFAMK-VMDKASLASRNKLLRAQTEREILGLLDHP 154
+ L K LG G G V V + FA+K V+ +R E +I+ +LDH
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNR--------ELDIMKVLDHV 60
Query: 155 FLPTLYSYFET--------------------------------------DKFYCLVMEFC 176
+ L YF T +K+ ++ME+
Sbjct: 61 NIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV 120
Query: 177 SGGNLHSLRQK--QPNKYFTEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGH 234
LH + + + + + + ++ A+ ++H LGI +RD+KP+N+LV + +
Sbjct: 121 PD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDN 179
Query: 235 IM-LSDF 240
+ L DF
Sbjct: 180 TLKLCDF 186
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 77/172 (44%), Gaps = 19/172 (11%)
Query: 100 KRLGYGDIGSV-----YLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
K LG G G V + ++ T A+K++ + + S ++ L +E +IL + H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRAL--MSELKILIHIGHH 90
Query: 155 F--LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKY----------FTEDAARFFA 202
+ L + + +++EFC GNL + + + N++ T + ++
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 203 SEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVK 254
+V +E+L ++RDL N+L+ ++ + + DF L+ P V+
Sbjct: 151 FQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 202
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
IL S+KN DFG ++ +P VR +++APE I + D
Sbjct: 175 ILLSEKNVVKICDFG-----LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 229
Query: 350 WTFGIFLYELLH-GTTPFKG 368
W+FG+ L+E+ G +P+ G
Sbjct: 230 WSFGVLLWEIFSLGASPYPG 249
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 77/172 (44%), Gaps = 19/172 (11%)
Query: 100 KRLGYGDIGSV-----YLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDHP 154
K LG G G V + ++ T A+K++ + + S ++ L +E +IL + H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRAL--MSELKILIHIGHH 90
Query: 155 F--LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKY----------FTEDAARFFA 202
+ L + + +++EFC GNL + + + N++ T + ++
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 203 SEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVK 254
+V +E+L ++RDL N+L+ ++ + + DF L+ P V+
Sbjct: 151 FQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVR 202
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 290 ILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDW 349
IL S+KN DFG ++ +P VR +++APE I + D
Sbjct: 175 ILLSEKNVVKIXDFGLA-----RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 229
Query: 350 WTFGIFLYELLH-GTTPFKG 368
W+FG+ L+E+ G +P+ G
Sbjct: 230 WSFGVLLWEIFSLGASPYPG 249
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 276 AVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAP 335
A C+ IL S+KN DFG ++ +P VR +++AP
Sbjct: 210 ASRKCIHRDLAARNILLSEKNVVKICDFG-----LARDIYKDPDYVRKGDARLPLKWMAP 264
Query: 336 EIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKG 368
E I + D W+FG+ L+E+ G +P+ G
Sbjct: 265 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 298
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 201 FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVK 254
++ +V +E+L ++RDL N+L+ ++ + + DF L+ P V+
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 251
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 98 LLKRLGYGDIGSVYLVELRGTN-------TYFAMKVMDKASLASRNKLLRAQTEREILGL 150
L K LG G G V + E G + A+K++ A+ L +E E++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKM 96
Query: 151 L-DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQP-NKYFTEDAARFFASEVLL 207
+ H + L D +++E+ S GNL LR ++P ++ D R ++
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 208 ------------ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL NVLV + + ++DF L+
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 98 LLKRLGYGDIGSVYLVELRGTN-------TYFAMKVMDKASLASRNKLLRAQTEREILGL 150
L K LG G G V + E G + A+K++ A+ L +E E++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKM 96
Query: 151 L-DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQP-NKYFTEDAARFFASEVLL 207
+ H + L D +++E+ S GNL LR ++P ++ D R ++
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 208 ------------ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL NVLV + + ++DF L+
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 276 AVHGCMQPSTFFPRILPSKKNRKSKSDFGPCVGGALPELMAEPTNVRSMSFVGTHEYLAP 335
A C+ IL S+KN DFG ++ +P VR +++AP
Sbjct: 208 ASRKCIHRDLAARNILLSEKNVVKICDFG-----LARDIYKDPDYVRKGDARLPLKWMAP 262
Query: 336 EIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKG 368
E I + D W+FG+ L+E+ G +P+ G
Sbjct: 263 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 296
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 201 FASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVK 254
++ +V +E+L ++RDL N+L+ ++ + + DF L+ P V+
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 249
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 98 LLKRLGYGDIGSVYLVELRGTN-------TYFAMKVMDKASLASRNKLLRAQTEREILGL 150
L K LG G G V + E G + A+K++ A+ L +E E++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEEDLSDLVSEMEMMKM 96
Query: 151 L-DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQP-NKYFTEDAARFFASEVLL 207
+ H + L D +++E+ S GNL LR ++P ++ D R ++
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 208 ------------ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL NVLV + + ++DF L+
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 98 LLKRLGYGDIGSVYLVELRGTN-------TYFAMKVMDKASLASRNKLLRAQTEREILGL 150
L K LG G G V + E G + A+K++ A+ L +E E++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKM 96
Query: 151 L-DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQP-NKYFTEDAARFFASEVLL 207
+ H + L D +++E+ S GNL LR ++P ++ D R ++
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 208 ------------ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL NVLV + + ++DF L+
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLA 204
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 98 LLKRLGYGDIGSVYLVELRGTN-------TYFAMKVMDKASLASRNKLLRAQTEREILGL 150
L K LG G G V + E G + A+K++ A+ L +E E++ +
Sbjct: 26 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKM 83
Query: 151 L-DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQP-NKYFTEDAARFFASEVLL 207
+ H + L D +++E+ S GNL LR ++P ++ D R ++
Sbjct: 84 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 143
Query: 208 ------------ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL NVLV + + ++DF L+
Sbjct: 144 KDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLA 191
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 98 LLKRLGYGDIGSVYLVELRGTN-------TYFAMKVMDKASLASRNKLLRAQTEREILGL 150
L K LG G G V + E G + A+K++ A+ L +E E++ +
Sbjct: 28 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKM 85
Query: 151 L-DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQP-NKYFTEDAARFFASEVLL 207
+ H + L D +++E+ S GNL LR ++P ++ D R ++
Sbjct: 86 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 145
Query: 208 ------------ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL NVLV + + ++DF L+
Sbjct: 146 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 193
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 58/146 (39%), Gaps = 3/146 (2%)
Query: 100 KRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQ--TEREILGLLDHPFLP 157
K +G G+ G VY L+ ++ + V K A + R E I+G H +
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 158 TLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYLHMLGI 217
L K ++ E+ G L +++ ++ + ++YL +
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRG-IAAGMKYLANMNY 168
Query: 218 VYRDLKPENVLVRDEGHIMLSDFDLS 243
V+RDL N+LV +SDF LS
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLS 194
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELL-HGTTPFKGQGNRATLFNVVGQPLRFP 386
+ APE I SA D W+FGI ++E++ +G P+ N + + R P
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM-KAINDGFRLP 270
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+ +RL +++G G G +YL GT+ +V K + K + E +I ++
Sbjct: 9 NRYRLGRKIGSGSFGDIYL----GTDIAAGEEVAIKLECV-KTKHPQLHIESKIYKMMQG 63
Query: 154 PF-LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
+PT+ + +VME G +L L K F+ A +++ +EY+
Sbjct: 64 GVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRK-FSLKTVLLLADQMISRIEYI 121
Query: 213 HMLGIVYRDLKPENVLV 229
H ++RD+KP+N L+
Sbjct: 122 HSKNFIHRDVKPDNFLM 138
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 98 LLKRLGYGDIGSVYLVELRGTN-------TYFAMKVMDKASLASRNKLLRAQTEREILGL 150
L K LG G G V + E G + A+K++ A+ L +E E++ +
Sbjct: 31 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKM 88
Query: 151 L-DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQP-NKYFTEDAARFFASEVLL 207
+ H + L D +++E+ S GNL LR ++P ++ D R ++
Sbjct: 89 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 148
Query: 208 ------------ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL NVLV + + ++DF L+
Sbjct: 149 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 196
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 94 SNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREILGLLDH 153
+ +RL +++G G G +YL GT+ +V K + K + E +I ++
Sbjct: 7 NRYRLGRKIGSGSFGDIYL----GTDIAAGEEVAIKLECV-KTKHPQLHIESKIYKMMQG 61
Query: 154 PF-LPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLALEYL 212
+PT+ + +VME G +L L K F+ A +++ +EY+
Sbjct: 62 GVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRK-FSLKTVLLLADQMISRIEYI 119
Query: 213 HMLGIVYRDLKPENVLV 229
H ++RD+KP+N L+
Sbjct: 120 HSKNFIHRDVKPDNFLM 136
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 98 LLKRLGYGDIGSVYLVELRGTN-------TYFAMKVMDKASLASRNKLLRAQTEREILGL 150
L K LG G G V + E G + A+K++ A+ L +E E++ +
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKM 96
Query: 151 L-DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQP-NKYFTEDAARFFASEVLL 207
+ H + L D +++E+ S GNL LR ++P ++ D R ++
Sbjct: 97 IGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 208 ------------ALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+EYL ++RDL NVLV + + ++DF L+
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 65/160 (40%), Gaps = 17/160 (10%)
Query: 98 LLKRLGYGDIGSVYLVELRG-----TNTYFAMK-VMDKASLASRNKLLRAQTEREILGLL 151
LL+ LG G G VY R T A+K V + ASL R + L E ++
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL---NEASVMKGF 77
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQPNKYF-------TEDAARFFAS 203
+ L + +VME + G+L S LR +P T A+
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
E+ + YL+ V+RDL N +V + + + DF ++
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 26/119 (21%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKGQGNRATLFNV-----VGQPLRF 385
++APE ++ ++ D W+FG+ L+E+ P++G N L V + QP
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 386 PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE 444
PE DL+R P+ R F E VN L++ L P PE
Sbjct: 258 PER------VTDLMRMCWQFNPNMRPT------------FLEIVN--LLKDDLHPSFPE 296
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 65/160 (40%), Gaps = 17/160 (10%)
Query: 98 LLKRLGYGDIGSVYLVELRG-----TNTYFAMK-VMDKASLASRNKLLRAQTEREILGLL 151
LL+ LG G G VY R T A+K V + ASL R + L E ++
Sbjct: 18 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL---NEASVMKGF 74
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQPNKYF-------TEDAARFFAS 203
+ L + +VME + G+L S LR +P T A+
Sbjct: 75 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 134
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
E+ + YL+ V+RDL N +V + + + DF ++
Sbjct: 135 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 174
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 48/119 (40%), Gaps = 26/119 (21%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKGQGNRATLFNV-----VGQPLRF 385
++APE ++ ++ D W+FG+ L+E+ P++G N L V + QP
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 254
Query: 386 PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE 444
PE DL+R P R F E VN L++ L P PE
Sbjct: 255 PER------VTDLMRMCWQFNPKMRPT------------FLEIVN--LLKDDLHPSFPE 293
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 65/160 (40%), Gaps = 17/160 (10%)
Query: 98 LLKRLGYGDIGSVYLVELRG-----TNTYFAMK-VMDKASLASRNKLLRAQTEREILGLL 151
LL+ LG G G VY R T A+K V + ASL R + L E ++
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL---NEASVMKGF 77
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQPNKYF-------TEDAARFFAS 203
+ L + +VME + G+L S LR +P T A+
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
E+ + YL+ V+RDL N +V + + + DF ++
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 48/119 (40%), Gaps = 26/119 (21%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKGQGNRATLFNV-----VGQPLRF 385
++APE ++ ++ D W+FG+ L+E+ P++G N L V + QP
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 386 PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE 444
PE DL+R P R F E VN L++ L P PE
Sbjct: 258 PER------VTDLMRMCWQFNPKMRPT------------FLEIVN--LLKDDLHPSFPE 296
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 64/170 (37%), Gaps = 15/170 (8%)
Query: 89 PPIGLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREIL 148
P + ++ + +G G+ G V ++ + AS++ E E+L
Sbjct: 17 PVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVL 76
Query: 149 GLLDH-PFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQ--------------PNKYF 193
L H P + L E + L +E+ GNL +K
Sbjct: 77 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 136
Query: 194 TEDAARFFASEVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
+ FA++V ++YL ++R+L N+LV + ++DF LS
Sbjct: 137 SSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLS 186
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKGQGNRATLFNVVGQPLRFPETPQ 390
++A E + + + D W++G+ L+E++ G TP+ G A L+ + Q R +
Sbjct: 204 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-TCAELYEKLPQGYRLEKPLN 262
Query: 391 VSFVARDLIRGLLVKEPHKR 410
DL+R ++P++R
Sbjct: 263 CDDEVYDLMRQCWREKPYER 282
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 65/160 (40%), Gaps = 17/160 (10%)
Query: 98 LLKRLGYGDIGSVYLVELRG-----TNTYFAMK-VMDKASLASRNKLLRAQTEREILGLL 151
LL+ LG G G VY R T A+K V + ASL R + L E ++
Sbjct: 20 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL---NEASVMKGF 76
Query: 152 DHPFLPTLYSYFETDKFYCLVMEFCSGGNLHS-LRQKQPNKYF-------TEDAARFFAS 203
+ L + +VME + G+L S LR +P T A+
Sbjct: 77 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 136
Query: 204 EVLLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLS 243
E+ + YL+ V+RDL N +V + + + DF ++
Sbjct: 137 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 176
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 48/119 (40%), Gaps = 26/119 (21%)
Query: 332 YLAPEIIRGEGHGSAVDWWTFGIFLYELLH-GTTPFKGQGNRATLFNV-----VGQPLRF 385
++APE ++ ++ D W+FG+ L+E+ P++G N L V + QP
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 256
Query: 386 PETPQVSFVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSALPPHIPE 444
PE DL+R P R F E VN L++ L P PE
Sbjct: 257 PER------VTDLMRMCWQFNPKMRPT------------FLEIVN--LLKDDLHPSFPE 295
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 8/140 (5%)
Query: 92 GLSNFRLLKRLGYGDIGSVYLVELRGTNTYFAMKVMDKASLASRNKLLRAQTEREI--LG 149
+ +R + +LG G G VY TN A+K + L + + RE+ L
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIK---RIRLEHEEEGVPGTAIREVSLLK 88
Query: 150 LLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEDAARFFASEVLLAL 209
L H + L S + L+ E+ +L K P+ + + F +++ +
Sbjct: 89 ELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPD--VSMRVIKSFLYQLINGV 145
Query: 210 EYLHMLGIVYRDLKPENVLV 229
+ H ++RDLKP+N+L+
Sbjct: 146 NFCHSRRCLHRDLKPQNLLL 165
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 329 THE-----YLAPEIIRGEGH-GSAVDWWTFGIFLYELLHGTTPFKGQGNRATLFNV 378
THE Y PEI+ G H ++VD W+ E+L T F G LF +
Sbjct: 195 THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKI 250
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,354,898
Number of Sequences: 62578
Number of extensions: 572153
Number of successful extensions: 3917
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 117
Number of HSP's that attempted gapping in prelim test: 1011
Number of HSP's gapped (non-prelim): 2134
length of query: 491
length of database: 14,973,337
effective HSP length: 103
effective length of query: 388
effective length of database: 8,527,803
effective search space: 3308787564
effective search space used: 3308787564
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)