Your job contains 1 sequence.
>035716
MLTSAATALHSLCISSQTPSPTSSSSPSNSQQLNIHLSTKPKSLLQNHPLYPPTQANLSF
QIKEKILCLEIMGVDSGKALSLNPSLHSASLNSIEGIISFLQSKGILQKDLPRIFGMCPK
VLTANIKTDLEPVFNFLSHDLEVPEHDFRKVINKCPRLLTSSARDQLKPALFYLQRLGFK
DLNALAYQDSVLLVSKVENTLIPKLKYLESIGFSKDEAVLMVLRCPGLFTFSIENNFKPK
FEYFNLEIKGKLEELKEFPQYFAFSLEKRIKPRHMQALRNGARLSLPVMLKTSDEEFNEL
IKPKPGRG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035716
(308 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2062328 - symbol:AT2G34620 "AT2G34620" species... 897 6.5e-90 1
TAIR|locus:2056745 - symbol:EMB93 "EMBRYO DEFECTIVE 93" s... 511 5.2e-49 1
TAIR|locus:2039240 - symbol:EMB3114 "AT2G36000" species:3... 430 2.0e-40 1
TAIR|locus:2087926 - symbol:AT3G18870 "AT3G18870" species... 382 2.4e-35 1
TAIR|locus:505006461 - symbol:MDA1 "AT4G14605" species:37... 285 1.5e-24 1
TAIR|locus:2049329 - symbol:EMB2219 "embryo defective 221... 269 1.9e-22 1
TAIR|locus:2207420 - symbol:AT1G78930 "AT1G78930" species... 243 1.0e-19 1
TAIR|locus:2162092 - symbol:AT5G55580 "AT5G55580" species... 216 5.8e-17 1
TAIR|locus:2139394 - symbol:BSM "AT4G02990" species:3702 ... 199 3.9e-14 1
TAIR|locus:2051814 - symbol:AT2G44020 "AT2G44020" species... 164 1.4e-09 1
TAIR|locus:2153433 - symbol:PTAC15 "AT5G54180" species:37... 161 3.2e-09 1
UNIPROTKB|G3V130 - symbol:MTERFD1 "mTERF domain-containin... 131 3.4e-06 1
UNIPROTKB|F1RY61 - symbol:MTERFD1 "Uncharacterized protei... 131 6.9e-06 1
UNIPROTKB|Q96E29 - symbol:MTERFD1 "mTERF domain-containin... 131 6.9e-06 1
TAIR|locus:2207265 - symbol:AT1G79220 species:3702 "Arabi... 130 8.3e-06 1
MGI|MGI:1913660 - symbol:Mterfd1 "MTERF domain containing... 130 8.8e-06 1
TAIR|locus:2177734 - symbol:AT5G64950 "AT5G64950" species... 129 1.1e-05 1
RGD|735158 - symbol:Mterfd1 "MTERF domain containing 1" s... 126 2.5e-05 1
UNIPROTKB|E2RL82 - symbol:MTERFD1 "Uncharacterized protei... 126 2.6e-05 1
UNIPROTKB|Q1LZE3 - symbol:MTERFD1 "Uncharacterized protei... 121 9.5e-05 1
TAIR|locus:2018062 - symbol:AT1G62150 "AT1G62150" species... 118 0.00025 1
TAIR|locus:2102827 - symbol:AT3G46950 "AT3G46950" species... 89 0.00050 2
TAIR|locus:2036878 - symbol:AT1G61990 "AT1G61990" species... 113 0.00051 2
GENEDB_PFALCIPARUM|PF07_0113 - symbol:PF07_0113 "hypothet... 116 0.00074 1
UNIPROTKB|Q8IBI2 - symbol:PF07_0113 "Putative uncharacter... 116 0.00074 1
TAIR|locus:2037338 - symbol:AT1G74120 "AT1G74120" species... 113 0.00085 1
>TAIR|locus:2062328 [details] [associations]
symbol:AT2G34620 "AT2G34620" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC004077 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 IPI:IPI00545404
PIR:H84758 RefSeq:NP_181009.1 UniGene:At.37779
ProteinModelPortal:O64685 SMR:O64685 STRING:O64685 PaxDb:O64685
PRIDE:O64685 EnsemblPlants:AT2G34620.1 GeneID:818027
KEGG:ath:AT2G34620 TAIR:At2g34620 eggNOG:NOG301834
HOGENOM:HOG000239190 InParanoid:O64685 OMA:RCPALFT PhylomeDB:O64685
ProtClustDB:CLSN2683649 Genevestigator:O64685 Uniprot:O64685
Length = 303
Score = 897 (320.8 bits), Expect = 6.5e-90, P = 6.5e-90
Identities = 173/268 (64%), Positives = 211/268 (78%)
Query: 37 LSTKP---KSLLQNHPLYPPTQANLSFQIKEKILCLEIMGVDSGKALSLNPSLHSASLNS 93
LSTKP K+ L +HPL+ ++ Q+KEKILCLE+MG+DSGKALSLNP L SA L+S
Sbjct: 27 LSTKPTTIKTNLHSHPLFTVADQTVTLQMKEKILCLELMGIDSGKALSLNPCLCSAPLDS 86
Query: 94 IEGIISFLQSKGILQKDLPRIFGMCPKVLTANIKTDLEPVFNFLSHDLEVPEHDFRKVIN 153
I+ ++ FLQSKGI DLPRI GMCPK+LT++++T+L PVF FLS+DL VPE+ FR+VI
Sbjct: 87 IQSVLHFLQSKGIYPNDLPRILGMCPKILTSDVRTELYPVFMFLSNDLHVPENAFRRVIK 146
Query: 154 KCPRLLTSSARDQLKPALFYLQRLGFKDLNALAYQDSVLLVSKVENTLIPKLKYLESIGF 213
KCPRLL SS DQLKPALFYLQRLG KDL ALAYQD +LLVS VE+TLIPKL++LESIGF
Sbjct: 147 KCPRLLISSVEDQLKPALFYLQRLGLKDLEALAYQDPILLVSSVEHTLIPKLRFLESIGF 206
Query: 214 SKDEAVLMVLRCPGLFTFSIENNFKPKFEYFNXXXXXXXXXXXXFPQYFAFSLEKRIKPR 273
S+ EA+ M+LRCP LFTFSIENNFKPK +YF FPQYFAFSLEKRIKPR
Sbjct: 207 SRPEAIGMILRCPALFTFSIENNFKPKLDYFMSEIKGKLENLKEFPQYFAFSLEKRIKPR 266
Query: 274 HMQALRNGARLSLPVMLKTSDEEFNELI 301
H++++ G L L +MLK++DEEF +L+
Sbjct: 267 HLESMERGLELPLSLMLKSTDEEFEQLL 294
>TAIR|locus:2056745 [details] [associations]
symbol:EMB93 "EMBRYO DEFECTIVE 93" species:3702
"Arabidopsis thaliana" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0071452 "cellular
response to singlet oxygen" evidence=IGI] GO:GO:0009507
EMBL:CP002685 GO:GO:0009793 GO:GO:0071452 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 EMBL:AY219044
EMBL:AY649248 IPI:IPI00531063 RefSeq:NP_178405.2 UniGene:At.41435
ProteinModelPortal:Q84X53 SMR:Q84X53 PRIDE:Q84X53
EnsemblPlants:AT2G03050.1 GeneID:814834 KEGG:ath:AT2G03050
TAIR:At2g03050 InParanoid:Q84X53 OMA:ELAEFPH PhylomeDB:Q84X53
ProtClustDB:CLSN2681137 Genevestigator:Q84X53 Uniprot:Q84X53
Length = 283
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 103/237 (43%), Positives = 155/237 (65%)
Query: 63 KEKILCLEIMGVDSGKALSLNPSLHSASLNSIEGIISFLQSKGILQKDLPRIFGMCPKVL 122
+EK++ L+ + VD KAL +NPSL SA ++S+ + + L S G+ + + RI M P +L
Sbjct: 33 REKLIYLQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLL 92
Query: 123 TANIKTDLEPVFNFLSHDLEVPEHDFRKVINKCPRLLTSSARDQLKPALFYLQRLGFKDL 182
T++ ++++ PV FLS+++ + E D K I++CPRLL SS QL+PAL +L+ LGF
Sbjct: 93 TSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGR 152
Query: 183 NALAYQDSVLLVSKVENTLIPKLKYLES-IGFSKDEAVLMVLRCPGLFTFSIENNFKPKF 241
+ + +++VLLVS VE TLIPK++YLE +GF+++E MV+R P L T+S++NN PK
Sbjct: 153 DTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKV 212
Query: 242 EYFNXXXXXXXXXXXXFPQYFAFSLEKRIKPRHMQALRNGARLSLPVMLKTSDEEFN 298
E+F FPQYF+FSLE++IKPRH +G + L MLK SD +FN
Sbjct: 213 EFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFN 269
>TAIR|locus:2039240 [details] [associations]
symbol:EMB3114 "AT2G36000" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009507 "chloroplast" evidence=IDA] GO:GO:0009507
EMBL:CP002685 GenomeReviews:CT485783_GR KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 EMBL:AY039871
EMBL:AY039888 EMBL:AY077666 IPI:IPI00529913 PIR:F84775
RefSeq:NP_850257.1 UniGene:At.21750 ProteinModelPortal:Q9SJ50
EnsemblPlants:AT2G36000.1 GeneID:818173 KEGG:ath:AT2G36000
TAIR:At2g36000 HOGENOM:HOG000149144 InParanoid:Q9SJ50 OMA:PTLYFLQ
PhylomeDB:Q9SJ50 ProtClustDB:CLSN2680066 Genevestigator:Q9SJ50
Uniprot:Q9SJ50
Length = 333
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 91/252 (36%), Positives = 141/252 (55%)
Query: 54 TQANLSFQIKEKILCLEIMGVDSGKALSLNPSLHSASLNSIEGIISFLQSKGI--LQKDL 111
T L I EK++ L+ +G+D ++ +P L S +L+++E ++ ++ + I +D
Sbjct: 65 TTETLESSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVESVVDYMTTPPINFTLQDF 124
Query: 112 PRIFGMCPKVLTANIKTDLEPVFNFLSHDLEVPE-HDFRKVINKCPRLLTSSARDQLKPA 170
R+ MCP++LT+ + + PV FL ++ V D R+ + + PRLL S QL+P
Sbjct: 125 RRLVSMCPELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQLRPT 184
Query: 171 LFYLQRLGFKDLNALAYQDSVLLVSKVENTLIPKLKYLESIGFSKDEAVLMVLRCPGLFT 230
L++LQR+G D + Y LL V+N L+P++ Y E +GFS+ A M R P LF
Sbjct: 185 LYFLQRIGILDPHKHTY----LLSCSVDNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFN 240
Query: 231 FSIENNFKPKFEYFNXXXXXXXXXXXXFPQYFAFSLEKRIKPRHMQALRNGARLSLPVML 290
+SI N++PK +Y FPQYF+FSLE RIKPRH G R LPVML
Sbjct: 241 YSIAENYEPKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVML 300
Query: 291 KTSDEEFNELIK 302
KT++ F + ++
Sbjct: 301 KTNEAGFRDTLE 312
>TAIR|locus:2087926 [details] [associations]
symbol:AT3G18870 "AT3G18870" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016556 "mRNA modification" evidence=RCA]
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AP002039
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
HOGENOM:HOG000239190 EMBL:BT029467 IPI:IPI00540238
RefSeq:NP_188517.1 UniGene:At.21618 UniGene:At.71275
ProteinModelPortal:Q9LHN2 SMR:Q9LHN2 EnsemblPlants:AT3G18870.1
GeneID:821420 KEGG:ath:AT3G18870 TAIR:At3g18870 eggNOG:NOG268043
InParanoid:Q9LHN2 OMA:PAIFGYS PhylomeDB:Q9LHN2
ProtClustDB:CLSN2684540 Genevestigator:Q9LHN2 Uniprot:Q9LHN2
Length = 274
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 94/270 (34%), Positives = 147/270 (54%)
Query: 39 TKPKSLLQNHPLYPPTQANLSFQI--KEKILCLEIMGVDSGKALSLNPSLHSAS--LNSI 94
+ P S + PLY L FQ +E + L +G+ + NP L + L+ I
Sbjct: 17 SSPPSPSSSKPLY------LKFQTSHRENLRHLSSLGI-----VPQNPRLAPPANDLSVI 65
Query: 95 EGIISFLQSKGILQKDLPRIFGMCPKVLTANIK-TDLEPVFNFLSHDLEVPEHDFRKVIN 153
++ L+SKGI +D PR+ +CP++ + + L+PVF+FL+ +L + R +I
Sbjct: 66 LSAVNLLKSKGISDEDFPRLVFLCPQLFSPTFDISKLDPVFDFLTGELGASAEESRGLIV 125
Query: 154 KCPRLLTSSARDQLKPALFYLQRLGFKDLNALAYQDSVLLVSKVENTLIPKLKYLESIGF 213
CP +L S L+P L YL+ LG ++LN + ++ +L ++VE L K+++L+SIGF
Sbjct: 126 NCPNILFSDVEYCLRPTLVYLKELGVRNLNRASKTNAHVLNTRVEK-LRAKMRFLKSIGF 184
Query: 214 SKDEAVLMVLRCPGLFTFSIENNFKPKFEYFNXXXXXXXXXXXXFPQYFAFSLEKRIKPR 273
+EA + R P +F +S+E+N +PKFE+ FPQYFAFSL KRI+PR
Sbjct: 185 EHEEAARVCGRIPAIFGYSVEDNLRPKFEFLVYDMERELEELKKFPQYFAFSLGKRIRPR 244
Query: 274 HMQALRNGARLSLPVMLKTSDEEFNELIKP 303
H + R+SL ML D++F KP
Sbjct: 245 HWHLKKKNVRVSLSRMLMWGDQKFYSKWKP 274
>TAIR|locus:505006461 [details] [associations]
symbol:MDA1 "AT4G14605" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0006970 "response to osmotic
stress" evidence=IMP] [GO:0009651 "response to salt stress"
evidence=IMP] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
GO:GO:0009737 EMBL:CP002687 GO:GO:0009651 GO:GO:0009658 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 IPI:IPI00532745
RefSeq:NP_567435.4 UniGene:At.33263 ProteinModelPortal:F4JVI3
SMR:F4JVI3 PRIDE:F4JVI3 EnsemblPlants:AT4G14605.1 GeneID:827109
KEGG:ath:AT4G14605 OMA:HLVSRLH PhylomeDB:F4JVI3 Uniprot:F4JVI3
Length = 493
Score = 285 (105.4 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 72/244 (29%), Positives = 124/244 (50%)
Query: 62 IKEKILCLEIMGVDSGKALSLNPSLHSASL-NSIEGIISFLQSKGILQKDLPRIFGMCPK 120
+ E +L L I D L P + SL ++++ ++FL++ GI + +I P
Sbjct: 235 VVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPA 294
Query: 121 VLTANIKTDLEPVFNFLSHDLEVPEHDFRKVINKCPRLLTSSARDQLKPALFYLQRLGFK 180
+LT + + L FLS + E +++ +CP +++ S D+L+P + Y + L
Sbjct: 295 ILTYS-RQKLTSTVEFLSQT-GLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNV- 351
Query: 181 DLNALAYQDSVLLVSKVENTLIPKLKYLESIGFSKDEAVLMVLRCPGLFTFSIENNFKPK 240
D+ L ++ +E+ L P ++ GF DE +M+ R L+TFS++ N PK
Sbjct: 352 DVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPK 411
Query: 241 FEYFNXXXXXXXXXXXXFPQYFAFSLEKRIKPRHMQALRNGARLSLPVMLKTSDEEFNEL 300
++YF FPQ+F +SL++RIKPR+ R+G RL L +L S EF ++
Sbjct: 412 WDYFQTMDYPKSELVK-FPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLSLSGIEFEKV 470
Query: 301 IKPK 304
+K K
Sbjct: 471 VKKK 474
Score = 184 (69.8 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 51/185 (27%), Positives = 93/185 (50%)
Query: 94 IEGIISFLQSKGILQKDLPRIFGMCPKVLTANIKTDLEPVFNFLSHDLEVPEHDFRKVIN 153
I+ ++ FL GI + D+P I P++ ++ +L+P FL L + ++ + K+I+
Sbjct: 232 IKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLE-TLGIDKNQWAKIIS 290
Query: 154 KCPRLLTSSARDQLKPALFYLQRLGFKD--LNALAYQDSVLLVSKVENTLIPKLKYLESI 211
+ P +LT S R +L + +L + G + + + + ++ VE+ L P ++Y S+
Sbjct: 291 RFPAILTYS-RQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSL 349
Query: 212 GFSKDEAVLMVLRCPGLFTFSIENNFKPKFEYFNXXXXXXXXXXXXFPQY---FAFSLEK 268
D AVL+ RCP F SIE+N KP E+F +Y + FSL++
Sbjct: 350 NV--DVAVLLH-RCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKE 406
Query: 269 RIKPR 273
+ P+
Sbjct: 407 NVMPK 411
>TAIR|locus:2049329 [details] [associations]
symbol:EMB2219 "embryo defective 2219" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] GO:GO:0009506 GO:GO:0009507
EMBL:CP002685 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 IPI:IPI00895653 RefSeq:NP_179763.3 UniGene:At.39539
ProteinModelPortal:F4IHL3 PRIDE:F4IHL3 EnsemblPlants:AT2G21710.1
GeneID:816708 KEGG:ath:AT2G21710 OMA:EMIADFP ArrayExpress:F4IHL3
Uniprot:F4IHL3
Length = 641
Score = 269 (99.8 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 73/265 (27%), Positives = 126/265 (47%)
Query: 51 YPPTQANLSFQIKEK-ILCLEIMGVDS---GKALSLNPSLHSASLNSI-EGIISFLQSKG 105
YP SFQ+ EK I L+ G+ + G+ L+ P L S+ + ++ + G
Sbjct: 340 YPKIIGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLG 399
Query: 106 ILQKDLPRIFGMCPKVLTANIKTDLEPVFNFLSHDLEVPEHDFRKVINKCPRLLTSSARD 165
I ++ + RI + P + +++ + P FL ++ +P ++ K P LLT+S
Sbjct: 400 IPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQ-EMGIPNEAIGNMLVKFPSLLTNSLYK 458
Query: 166 QLKPA-LFYLQRLGF--KDLNALAYQDSVLLVSKVENTLIPKLKYLESIGFSKDEAVLMV 222
+++P +F L R G KD+ + D LL + L P ++Y S+G + M+
Sbjct: 459 KIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMI 518
Query: 223 LRCPGLFTFSIENNFKPKFEYFNXXXXXXXXXXXXFPQYFAFSLEKRIKPRHMQALRNGA 282
P L ++++N +PK+ Y FP++F++SLE+RI PRH + N
Sbjct: 519 ADFPMLLRYNVDN-LRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRV 577
Query: 283 RLSLPVMLKTSDEEFNELIKPKPGR 307
L ML +DEEF ++ K R
Sbjct: 578 NFKLRYMLACTDEEFERRVRDKVER 602
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 41/184 (22%), Positives = 82/184 (44%)
Query: 61 QIKEKILCLEIMGV--D-SGKALSLNPSLHSASLNSIEGIISFLQSKGILQKDLPRIFGM 117
++ E + LE GV D G + P L S S+ ++ + F G+ Q D +
Sbjct: 280 ELNEIVEYLESNGVRRDWMGYVVGRCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYD 339
Query: 118 CPKVLTANIKTDLEPVFNFLSHDLEVPEHDFRKVINKCPRLLTSSARDQLKPALFYLQRL 177
PK++ +E N+L + + + +++ P L+ S ++ KP + Y L
Sbjct: 340 YPKIIGFFSFQVMEKKINYLK-EFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYL 398
Query: 178 GF--KDLNALAYQDSVLLVSKVENTLIPKLKYLESIGFSKDEAVLMVLRCPGLFTFSIEN 235
G + + + +L +E T+ PK+++L+ +G + M+++ P L T S+
Sbjct: 399 GIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYK 458
Query: 236 NFKP 239
+P
Sbjct: 459 KIRP 462
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 39/182 (21%), Positives = 80/182 (43%)
Query: 97 IISFLQSKGILQKDLPRIFGMCPKVLTANIKTDLEPVFNFLSHDLEVPEHDFRKVINKCP 156
I+ +L+S G+ + + + G CP++L+ +++ V FL + ++DF ++ P
Sbjct: 284 IVEYLESNGVRRDWMGYVVGRCPELLSFSMEEVKSRVDFFLKMGMN--QNDFGTMVYDYP 341
Query: 157 RLLTSSARDQLKPALFYLQRLGFKDLNA---LAYQDSVLLVSKVENTLIPKLKYLESIGF 213
+++ + ++ + YL+ G LAY+ ++ S +E P +KY +G
Sbjct: 342 KIIGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCS-IEERWKPLVKYFYYLGI 400
Query: 214 SKDEAVLMVLRCPGLFTFSIENNFKPKFEYFNXXXX---XXXXXXXXFPQYFAFSLEKRI 270
K+ +++ P L+ +E PK + FP SL K+I
Sbjct: 401 PKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKI 460
Query: 271 KP 272
+P
Sbjct: 461 RP 462
>TAIR|locus:2207420 [details] [associations]
symbol:AT1G78930 "AT1G78930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009507 "chloroplast" evidence=IDA] EMBL:CP002684
GO:GO:0009507 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 EMBL:AK228193 IPI:IPI00543979 RefSeq:NP_178014.2
UniGene:At.34214 ProteinModelPortal:Q0WRV2 SMR:Q0WRV2 PRIDE:Q0WRV2
EnsemblPlants:AT1G78930.1 GeneID:844232 KEGG:ath:AT1G78930
TAIR:At1g78930 HOGENOM:HOG000084735 InParanoid:Q0WRV2 OMA:PHILGCS
PhylomeDB:Q0WRV2 ProtClustDB:CLSN2680664 Genevestigator:Q0WRV2
Uniprot:Q0WRV2
Length = 591
Score = 243 (90.6 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 70/258 (27%), Positives = 118/258 (45%)
Query: 44 LLQNHP--LYPPTQANLSFQIKEKILCLEIMGVDSGKALSLNPSLHSASLNSIEGIISFL 101
LL +P L P Q N S I ++ +D A+ P L S +++E ++
Sbjct: 320 LLLKYPWILSPSIQENYS-HIGSFFYSESVLKMDIDHAIRRWPLLLGCSASNMEMMVKEF 378
Query: 102 QSKGILQKDLPRIFGMCPKVLTANIKTDLEPVFNFLSHDLEVPEHDFRKVINKCPRLLTS 161
G+ K + ++ P++L + L+ V FL DL + +++ +CP +
Sbjct: 379 DKLGVRDKRMGKVIPKMPQLLLCKPQEFLKVVC-FLE-DLGFQKEIVGQILCRCPEIFGC 436
Query: 162 SARDQLKPALFYLQRLGFKDLN--ALAYQDSVLLVSKVENTLIPKLKYLESIGFSKDEAV 219
S L+ L +L R G + + + L+ + T++P+LKYL IG S+ E
Sbjct: 437 SIEKTLQKKLIFLTRFGVSTTHFPRIIKKYPEFLIYDADKTVLPRLKYLMEIGISEREIA 496
Query: 220 LMVLRCPGLFTFSIENNFKPKFEYFNXXXXXXXXXXXXFPQYFAFSLEKRIKPRHMQALR 279
M+ + + +SI+ +PKFE+ +P+YF++SLEKRIKPR
Sbjct: 497 FMIRKFSPILGYSIDKVLRPKFEFLVNSMEKPVREVIEYPRYFSYSLEKRIKPRFRVLKG 556
Query: 280 NGARLSLPVMLKTSDEEF 297
+L ML +DEEF
Sbjct: 557 RNIECTLQEMLGKNDEEF 574
Score = 144 (55.7 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 55/234 (23%), Positives = 100/234 (42%)
Query: 50 LYPPTQANLSFQIKEKILC----LEIMGVDSGKALSLNPSLHSASLN-SIEGIISFLQSK 104
LYPP + +IK ++ + ++ DSGK L P + S S+ + I SF S+
Sbjct: 287 LYPPIMLGKTEEIKRRVATAMEKVSVVNKDSGKLLLKYPWILSPSIQENYSHIGSFFYSE 346
Query: 105 GILQKDLPRIFGMCPKVLTANIKTDLEPVFNFLSHDLEVPEHDFRKVINKCPRLLTSSAR 164
+L+ D+ P +L + +++E + L V + KVI K P+LL +
Sbjct: 347 SVLKMDIDHAIRRWPLLLGCSA-SNMEMMVKEFDK-LGVRDKRMGKVIPKMPQLLLCKPQ 404
Query: 165 DQLKPALFYLQRLGF-KDL-NALAYQDSVLLVSKVENTLIPKLKYLESIGFSKDEAVLMV 222
+ LK F L+ LGF K++ + + + +E TL KL +L G S ++
Sbjct: 405 EFLKVVCF-LEDLGFQKEIVGQILCRCPEIFGCSIEKTLQKKLIFLTRFGVSTTHFPRII 463
Query: 223 LRCPGLFTFSIENNFKPKFEYF---NXXXXXXXXXXXXFPQYFAFSLEKRIKPR 273
+ P + + P+ +Y F +S++K ++P+
Sbjct: 464 KKYPEFLIYDADKTVLPRLKYLMEIGISEREIAFMIRKFSPILGYSIDKVLRPK 517
>TAIR|locus:2162092 [details] [associations]
symbol:AT5G55580 "AT5G55580" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0048364 "root development" evidence=IMP]
[GO:0048367 "shoot system development" evidence=IMP] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0048364 GO:GO:0048367
EMBL:AB009050 eggNOG:NOG246142 KO:K15032 InterPro:IPR003690
Pfam:PF02536 SMART:SM00733 UniGene:At.27411 EMBL:AY062691
EMBL:BT000141 IPI:IPI00542422 RefSeq:NP_200369.1
ProteinModelPortal:Q9FM80 SMR:Q9FM80 PRIDE:Q9FM80
EnsemblPlants:AT5G55580.1 GeneID:835652 KEGG:ath:AT5G55580
TAIR:At5g55580 HOGENOM:HOG000084463 InParanoid:Q9FM80 OMA:RPRHRFL
PhylomeDB:Q9FM80 ProtClustDB:CLSN2686991 ArrayExpress:Q9FM80
Genevestigator:Q9FM80 Uniprot:Q9FM80
Length = 496
Score = 216 (81.1 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 67/276 (24%), Positives = 130/276 (47%)
Query: 36 HLST---KPKSLLQNHPLYPPT-QANLSFQIKEKILCLEIMGV---DSGKALSLNPSLHS 88
+LST K +Q + + P+ Q N+ F +E++ L +GV D + L P +
Sbjct: 190 YLSTFGLKESHFVQMYERHMPSLQINV-FSAQERLDYLLSVGVKHRDIKRMLLRQPQILQ 248
Query: 89 ASL-NSIEGIISFLQSKGILQKDLPRIFGMCPKVLTANIKTDLEPVFNFLSHDLEVPEHD 147
++ N+++ ISFL GI + +I P + + +++ L P +L ++ + E D
Sbjct: 249 YTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETD 308
Query: 148 FRKVINKCPRLLTSSARDQLKPALFYLQR-LGF-KD-LNALAYQDSVLLVSKVENTLIPK 204
KV+ P++L +L + LG +D + + + LL +++ +P+
Sbjct: 309 VGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPR 368
Query: 205 LKYLESIGFSKDEAVLMVLRCPGLFTFSIENNFKPKFEYFNXXXXXXXXXXXXFPQYFAF 264
+ +L SIG + + ++ + + S+E+N KPK+ Y +P Y +
Sbjct: 369 INFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSL 428
Query: 265 SLEKRIKPRH--MQALRNGARLSLPVM-LKTSDEEF 297
SL++RI+PRH + L+ + P+ L +DE F
Sbjct: 429 SLDQRIRPRHRFLVELKKVRKGPFPLSSLVPNDESF 464
>TAIR|locus:2139394 [details] [associations]
symbol:BSM "AT4G02990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0009536 "plastid" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0032502 "developmental
process" evidence=IMP] [GO:0042793 "transcription from plastid
promoter" evidence=IMP] [GO:0042794 "rRNA transcription from
plastid promoter" evidence=IMP] GO:GO:0009536 EMBL:CP002687
GO:GO:0008380 GO:GO:0009790 EMBL:AF069442 EMBL:AL161495 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 HOGENOM:HOG000241428
ProtClustDB:PLN03196 IPI:IPI00547639 PIR:T01394 RefSeq:NP_192208.1
UniGene:At.10877 ProteinModelPortal:Q9ZT96 SMR:Q9ZT96 STRING:Q9ZT96
PRIDE:Q9ZT96 EnsemblPlants:AT4G02990.1 GeneID:828116
KEGG:ath:AT4G02990 TAIR:At4g02990 InParanoid:Q9ZT96 OMA:FPAFFTY
PhylomeDB:Q9ZT96 ArrayExpress:Q9ZT96 Genevestigator:Q9ZT96
GO:GO:0042794 Uniprot:Q9ZT96
Length = 541
Score = 199 (75.1 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 67/271 (24%), Positives = 116/271 (42%)
Query: 37 LSTKPKSLLQNHPLYPPTQA-NLSFQIKEKILCLEIMGV---DSGKALSLNPSLHSASL- 91
L KP + + YP L + + L +GV + G L+ P + +
Sbjct: 225 LDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEILGMRVA 284
Query: 92 NSIEGIISFLQSKGILQKDLPRIFGMCPKVLTANIKTDLEPVFNFLSHDLEVPEHDFRKV 151
I+ ++ +L+ GI + R+ P +L + ++P L D V E +
Sbjct: 285 RIIKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQ-DFNVRETSLPSI 343
Query: 152 INKCPRLLTSSARDQL---KPALFYLQRLGFKDLNALAYQDSVLLVSKVENTLIPKLKYL 208
I + P ++ + +L + L L +DL +L + VS E+ ++ + +L
Sbjct: 344 IAQYPEIIGIDLKPKLDTQRKLLCSAIHLNPEDLGSLI-ERMPQFVSLSESPMLKHIDFL 402
Query: 209 ESIGFSKDEAVLMVLRCPGLFTFSIENNFKPKFEYFNXXXXXXXXXXXXFPQYFAFSLEK 268
GFS D+ MV+ CP + ++ K FEYF FP +F + LE
Sbjct: 403 TKCGFSIDQTREMVIGCPQVLALNL-GIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLES 461
Query: 269 RIKPRHMQALRNGARLSLPVMLKTSDEEFNE 299
+KPRH + ++ G + SL ML SDE+F +
Sbjct: 462 TVKPRHKKIIKKGIKCSLAWMLNCSDEKFEQ 492
Score = 158 (60.7 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 56/214 (26%), Positives = 94/214 (43%)
Query: 98 ISFLQSKGILQKDLPRIFGMCPKVLTANIKTDLEPVFNFLSHDLEVPEHDFRKVINKCPR 157
+ FL G+ +D+ P VL ++K ++ PV ++L L V + F + + + P+
Sbjct: 151 VEFLHKLGLTIEDINNY----PLVLGCSVKKNMVPVLDYLGK-LGVRKSTFTEFLRRYPQ 205
Query: 158 LLTSSARDQLKPALFYLQRLGFK--DLNALAYQDSVLLVSKVENTLIPKLKYLESIGFSK 215
+L SS L P + YLQ L K D+ + + +L K+E T+ + YL IG ++
Sbjct: 206 VLHSSVVIDLAPVVKYLQGLDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVAR 265
Query: 216 DEAVLMVLRCPGLFTFSIENNFKPKFEYFNXXXXXXXXXXXXF---PQYFAFSLEKRIKP 272
E ++ R P + + KP EY P F L+ +KP
Sbjct: 266 REIGGILTRYPEILGMRVARIIKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKP 325
Query: 273 RHMQALR--NGARLSLPVMLKTSDEEFNELIKPK 304
++Q L+ N SLP ++ E +KPK
Sbjct: 326 -NVQILQDFNVRETSLPSIIAQYPEIIGIDLKPK 358
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 40/215 (18%), Positives = 97/215 (45%)
Query: 62 IKEKILCLEIMGVDSGKALSLNPSLHSASLN-SIEGIISFLQSKGILQKDLPRIFGMCPK 120
+KE++ L +G+ + ++ P + S+ ++ ++ +L G+ + P+
Sbjct: 147 MKERVEFLHKLGLTI-EDINNYPLVLGCSVKKNMVPVLDYLGKLGVRKSTFTEFLRRYPQ 205
Query: 121 VLTANIKTDLEPVFNFLSHDLEVPEHDFRKVINKCPRLLTSSARDQLKPALFYLQRLGF- 179
VL +++ DL PV +L L++ D +V+ + P +L + ++ YL +G
Sbjct: 206 VLHSSVVIDLAPVVKYLQ-GLDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVA 264
Query: 180 -KDLNALAYQDSVLLVSKVENTLIPKLKYLESIGFSKDEAVLMVLRCPGLFTFSIENNFK 238
+++ + + +L +V + P ++YLE +G + A ++ + P + F +++ K
Sbjct: 265 RREIGGILTRYPEILGMRVARIIKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVK 324
Query: 239 PKFEY---FNXXXXXXXXXXXXFPQYFAFSLEKRI 270
P + FN +P+ L+ ++
Sbjct: 325 PNVQILQDFNVRETSLPSIIAQYPEIIGIDLKPKL 359
>TAIR|locus:2051814 [details] [associations]
symbol:AT2G44020 "AT2G44020" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004005
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
EMBL:AY039920 EMBL:AY079380 IPI:IPI00516323 PIR:T00682
RefSeq:NP_566005.1 UniGene:At.19499 UniGene:At.71899
ProteinModelPortal:O80572 SMR:O80572 PaxDb:O80572 PRIDE:O80572
EnsemblPlants:AT2G44020.1 GeneID:819007 KEGG:ath:AT2G44020
TAIR:At2g44020 eggNOG:NOG235651 HOGENOM:HOG000241428
InParanoid:O80572 OMA:YFTYSLE PhylomeDB:O80572 ProtClustDB:PLN03196
ArrayExpress:O80572 Genevestigator:O80572 Uniprot:O80572
Length = 507
Score = 164 (62.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 53/232 (22%), Positives = 106/232 (45%)
Query: 75 DSGKALSLNPSLHSASLNS-IEGIISFLQSKGILQKDLPRIFGMCPKVLTANIKTDLEPV 133
D G ++ P L + + I+ ++ +L S G+ +K + R+ ++ N++ ++P
Sbjct: 232 DIGPMVTQYPYLLGMRVGTMIKPLVDYLISIGLPKKIVARMLEKRSYIVGYNLEETVKPN 291
Query: 134 FNFLSHDLEVPEHDFRKVINKCPRLLTSSARDQLKPALFYLQRLGFK-DLNALA--YQDS 190
+ L V + +I + P++L + ++ ++ L K D A +
Sbjct: 292 VDCLI-SFGVKKELLPLLIAQYPQILGLPVKAKMSTQQYFFS-LKLKIDPEGFARVVEKM 349
Query: 191 VLLVSKVENTLIPKLKYLESIGFSKDEAVLMVLRCPGLFTFSIENNFKPKFEYFNXXXXX 250
+VS +N ++ +++L F ++ MV+RCP + +E K + ++
Sbjct: 350 PQIVSLKQNVIMKPIEFLLGRAFQVEDIAKMVVRCPQILCSRVEL-MKNSYYFYKTEMGR 408
Query: 251 XXXXXXXFPQYFAFSLEKRIKPRHMQALRNGARLSLPVMLKTSDEEFNELIK 302
+P+YF +SLE RIKPR+ + G R SL L SD+ F E ++
Sbjct: 409 PMKELVEYPEYFTYSLESRIKPRYQKLQSKGIRSSLNWFLNCSDQRFEERLQ 460
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 58/239 (24%), Positives = 103/239 (43%)
Query: 63 KEKILCLEIMGVDSGKALSL-NPSLHSASLNS-IEGI---ISFLQSKGILQKDLPRIFGM 117
KEK++ + D K L + L S L S IE + + FLQ G+ D+
Sbjct: 77 KEKLVN-RVKICDYLKGLGIITDELESIELPSTIEVMCERVEFLQKLGLTIDDINEY--- 132
Query: 118 CPKVLTANIKTDLEPVFNFLSHDLEVPEHDFRKVINKCPRLLTSSARDQLKPALFYLQRL 177
P +L +++ +L PV +L + + + + P++L +S +L P + +L+ L
Sbjct: 133 -PLMLGCSVRKNLIPVLAYLEK-IGISRSKLGEFVKNYPQVLHASVVVELAPVVKFLRGL 190
Query: 178 GFK--DLNALAYQDSVLLVSKVENTLIPKLKYLESIGFSKDEAVLMVLRCPGLFTFSIEN 235
+ DL + + LL K+E T+ + YL SIG S + MV + P L +
Sbjct: 191 DVEKQDLGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYLLGMRVGT 250
Query: 236 NFKPKFEYFNXXXXXXXXXXXXFPQ--YFA-FSLEKRIKPRHMQALRNGARLSL-PVML 290
KP +Y + Y ++LE+ +KP + G + L P+++
Sbjct: 251 MIKPLVDYLISIGLPKKIVARMLEKRSYIVGYNLEETVKPNVDCLISFGVKKELLPLLI 309
>TAIR|locus:2153433 [details] [associations]
symbol:PTAC15 "AT5G54180" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009295 "nucleoid" evidence=IDA] [GO:0009508
"plastid chromosome" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0042793 "transcription from plastid promoter"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] EMBL:CP002688 GO:GO:0009507
EMBL:AB013387 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
GO:GO:0009508 EMBL:AY081343 EMBL:BT000254 IPI:IPI00519701
RefSeq:NP_200229.1 UniGene:At.29509 ProteinModelPortal:Q9FK23
PRIDE:Q9FK23 EnsemblPlants:AT5G54180.1 GeneID:835506
KEGG:ath:AT5G54180 TAIR:At5g54180 InParanoid:Q9FK23 OMA:DNIEMIC
PhylomeDB:Q9FK23 ProtClustDB:CLSN2686733 ArrayExpress:Q9FK23
Genevestigator:Q9FK23 Uniprot:Q9FK23
Length = 500
Score = 161 (61.7 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 56/228 (24%), Positives = 105/228 (46%)
Query: 76 SGKALSLNPSLHSASLNSIEGIISFLQS-KGILQKDLPRIFGMCPKVLTANIKTDLEPVF 134
+G L P++ S S+ + G + FL+S G+ + + +I + P V++ + + L P
Sbjct: 268 TGTVLRRLPAILSYSVEHMNGQVEFLKSFAGLTSEQVFKIVHVFPNVISTSKERKLRPRI 327
Query: 135 NFLSH-DLEVPEHDFRKVINKCPRLLTSSARDQLKPALFYLQRLGFKD-LNALAYQDSVL 192
FL + P K ++K P +L S + L L +L ++G+K LA+ +
Sbjct: 328 EFLKECGFDSP--GMFKFLSKAPLILALS-ENNLSHKLGFLVKIGYKHRTKELAFAMGAV 384
Query: 193 LVSKVENTLIPKLKYLESIGFSKDEAVLMVLRCPGLFTFSIENNFKPKFEYFNXXXXXXX 252
+ +N YL S G S ++ + M + P + ++ + + K EY
Sbjct: 385 TRTSSDNMQRVIGLYL-SYGLSFEDILAMSTKHPQVLQYNY-TSLEEKLEYLIEYMGREV 442
Query: 253 XXXXXFPQYFAFSLEKRIKPRHMQALRN-GARLSLPVMLKTSDEEFNE 299
FP + + L+ RIK R+ + L++ G +SL +L S E F++
Sbjct: 443 EELLAFPAFLGYKLDSRIKHRYEEKLKSRGENMSLNKLLTVSAERFSK 490
>UNIPROTKB|G3V130 [details] [associations]
symbol:MTERFD1 "mTERF domain-containing protein 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] GO:GO:0005739
EMBL:CH471060 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
EMBL:AP003465 UniGene:Hs.308613 HGNC:HGNC:24258
ProteinModelPortal:G3V130 SMR:G3V130 Ensembl:ENST00000522822
ArrayExpress:G3V130 Bgee:G3V130 Uniprot:G3V130
Length = 296
Score = 131 (51.2 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 53/237 (22%), Positives = 106/237 (44%)
Query: 43 SLLQNHPLYPPTQANLSFQ--IKEKILCLEIMGVDS---GKALSLNPSLHSASLNSIEGI 97
S ++ HP L F+ IK+ +L L+ +G++ G L+ N ++ S L +++
Sbjct: 46 SKIEKHPEAANLLLRLDFEKDIKQMLLFLKDVGIEDNQLGAFLTKNHAIFSEDLENLKTR 105
Query: 98 ISFLQSKGILQKDLPRIFGMCPKVLTANIKTDLEPVFNFLSHDLEVPEHDFRKVINKCPR 157
+++L SK + D+ ++ P +L +++ L+ F +LE+ R ++ + PR
Sbjct: 106 VAYLHSKNFSKADVAQMVRKAPFLLNFSVER-LDNRLGFFQKELELSVKKTRDLVVRLPR 164
Query: 158 LLTSSARDQLKPALFYLQRLGFKDLNALAYQDSVLLVSKVENTLIP-KLKYLESIGFSKD 216
LLT S + Y LGFK N + + +++++ L K+K E+ F +
Sbjct: 165 LLTGSLEPVKENMKVYRLELGFKH-NEIQH-----MITRIPKMLTANKMKLTETFDFVHN 218
Query: 217 EAVL---MVLRCPGLFTFSIENNFKPKFEYFNXXXXXXXXXXXXFPQYFAFSLEKRI 270
+ ++++ P +F + FK K + P Y SL+K +
Sbjct: 219 VMSIPHHIIVKFPQVFNTRL---FKVKERHLFLTYLGRAQYDPAKPNYI--SLDKLV 270
>UNIPROTKB|F1RY61 [details] [associations]
symbol:MTERFD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] GO:GO:0005739 GO:GO:0044212 CTD:51001 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 OMA:TRVAYLQ
GeneTree:ENSGT00390000005801 EMBL:CU463146 RefSeq:XP_001929306.1
UniGene:Ssc.10844 Ensembl:ENSSSCT00000006681 GeneID:100152384
KEGG:ssc:100152384 Uniprot:F1RY61
Length = 414
Score = 131 (51.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 57/237 (24%), Positives = 107/237 (45%)
Query: 43 SLLQNHPLYPPTQANLSFQ--IKEKILCLEIMGVDS---GKALSLNPSLHSASLNSIEGI 97
S ++ HP L F+ IK+ +L L+ +G++ G L+ N ++ S L +++
Sbjct: 164 SKIEKHPDAANLLLRLDFEKDIKQILLFLKDLGMEDNQLGTFLTKNYAIFSEDLENLKTR 223
Query: 98 ISFLQSKGILQKDLPRIFGMCPKVLTANIKTDLEPVFNFLSHDLEVPEHDFRKVINKCPR 157
+++LQSK + D+ ++ P +L+ +++ L+ F +LE+ R +I + PR
Sbjct: 224 VAYLQSKNFSKADIAQMVRNAPFLLSFSVER-LDNRLGFFQKELELSVKKTRDLIIRLPR 282
Query: 158 LLTSSARDQLKPALFYLQRLGFKDLNALAYQDSVLLVSKVENTLIP-KLKYLESIGFSKD 216
LLT S + Y LGFK N + + +V+K+ L K K E+ + +
Sbjct: 283 LLTGSLEPVKENMKVYRLELGFKH-NEIQH-----MVTKIPKMLTANKRKLTETFDYVHN 336
Query: 217 EAVL---MVLRCPGLFTFSIENNFKPKFEYFNXXXXXXXXXXXXFPQYFAFSLEKRI 270
+ +++R P +F + FK K + P Y SL+K +
Sbjct: 337 VMRIPHHVIVRFPQVFNTRL---FKIKERHLFLAYLGRAQYDPAKPNYI--SLDKLV 388
>UNIPROTKB|Q96E29 [details] [associations]
symbol:MTERFD1 "mTERF domain-containing protein 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
GO:GO:0005739 GO:GO:0045892 GO:GO:0006351 GO:GO:0044212 CTD:51001
eggNOG:NOG246142 HOGENOM:HOG000044443 HOVERGEN:HBG062577 KO:K15032
OrthoDB:EOG4CRM08 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
EMBL:AF132946 EMBL:AP003465 EMBL:BC012995 IPI:IPI00101163
IPI:IPI00798150 RefSeq:NP_057026.3 UniGene:Hs.308613 PDB:3M66
PDB:3OPG PDBsum:3M66 PDBsum:3OPG ProteinModelPortal:Q96E29
SMR:Q96E29 STRING:Q96E29 DMDM:74731522 PaxDb:Q96E29 PRIDE:Q96E29
DNASU:51001 Ensembl:ENST00000287025 GeneID:51001 KEGG:hsa:51001
UCSC:uc003yhr.1 GeneCards:GC08M097321 HGNC:HGNC:24258 HPA:HPA002966
neXtProt:NX_Q96E29 PharmGKB:PA142671309 InParanoid:Q96E29
OMA:TRVAYLQ PhylomeDB:Q96E29 EvolutionaryTrace:Q96E29
GenomeRNAi:51001 NextBio:53456 ArrayExpress:Q96E29 Bgee:Q96E29
CleanEx:HS_MTERFD1 Genevestigator:Q96E29 GermOnline:ENSG00000156469
Uniprot:Q96E29
Length = 417
Score = 131 (51.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 53/237 (22%), Positives = 106/237 (44%)
Query: 43 SLLQNHPLYPPTQANLSFQ--IKEKILCLEIMGVDS---GKALSLNPSLHSASLNSIEGI 97
S ++ HP L F+ IK+ +L L+ +G++ G L+ N ++ S L +++
Sbjct: 167 SKIEKHPEAANLLLRLDFEKDIKQMLLFLKDVGIEDNQLGAFLTKNHAIFSEDLENLKTR 226
Query: 98 ISFLQSKGILQKDLPRIFGMCPKVLTANIKTDLEPVFNFLSHDLEVPEHDFRKVINKCPR 157
+++L SK + D+ ++ P +L +++ L+ F +LE+ R ++ + PR
Sbjct: 227 VAYLHSKNFSKADVAQMVRKAPFLLNFSVER-LDNRLGFFQKELELSVKKTRDLVVRLPR 285
Query: 158 LLTSSARDQLKPALFYLQRLGFKDLNALAYQDSVLLVSKVENTLIP-KLKYLESIGFSKD 216
LLT S + Y LGFK N + + +++++ L K+K E+ F +
Sbjct: 286 LLTGSLEPVKENMKVYRLELGFKH-NEIQH-----MITRIPKMLTANKMKLTETFDFVHN 339
Query: 217 EAVL---MVLRCPGLFTFSIENNFKPKFEYFNXXXXXXXXXXXXFPQYFAFSLEKRI 270
+ ++++ P +F + FK K + P Y SL+K +
Sbjct: 340 VMSIPHHIIVKFPQVFNTRL---FKVKERHLFLTYLGRAQYDPAKPNYI--SLDKLV 391
>TAIR|locus:2207265 [details] [associations]
symbol:AT1G79220 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC002986 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 IPI:IPI00545922
PIR:T01035 RefSeq:NP_565202.1 UniGene:At.34152
ProteinModelPortal:O64531 EnsemblPlants:AT1G79220.1 GeneID:844263
KEGG:ath:AT1G79220 TAIR:At1g79220 eggNOG:NOG329730
HOGENOM:HOG000114992 InParanoid:O64531 OMA:KVQRNMT PhylomeDB:O64531
ProtClustDB:CLSN2689322 Genevestigator:O64531 Uniprot:O64531
Length = 399
Score = 130 (50.8 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 51/223 (22%), Positives = 101/223 (45%)
Query: 55 QANLSFQIKEKILCLEIMGVDSG---KALSLNPSLHSASLNSIEGIISFLQSKGILQKDL 111
+AN++ Q++ K+ L+ +G+ S K L+ P S L E I F++ G ++ L
Sbjct: 109 RANVA-QLEFKLSLLKPLGITSSDLVKILNCRPRFFSCRLVLDERINYFMEILGS-KEVL 166
Query: 112 PRIFGMCPKVLTANIKTDLEPVFNFLSHDLEVPEHDFRKVINKCPRLLTSSARDQLKPAL 171
R+ P ++ ++ ++P + L + D ++ P L+ + + K
Sbjct: 167 RRVIIRNPSLMLYDLDDKIKPAIEYYK-GLGFSQQDLVAMLISRPTLIPRTNFNNEK--F 223
Query: 172 FYLQRLGF-KDLNALAYQDSVLLVSKVENTLIPKLKYLESIGFSKDEAVLMVLRCPGLFT 230
Y+++ G ++ Y ++ VS++E T+ K++ LE GFS++E + +CP L +
Sbjct: 224 EYIEKTGVTRESKMFKYVAVIIGVSRME-TIEEKVRNLEKFGFSEEEIWHLYGKCPILLS 282
Query: 231 FSIENNFKPKFEYFNXXXXXXXXXXXXFPQYFAFSLEKRIKPR 273
S+E + + P +LE R+KPR
Sbjct: 283 LSVEK-VQRNMTFVIASMKLPAHSVVKHPCLLLLNLESRLKPR 324
Score = 124 (48.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 40/141 (28%), Positives = 68/141 (48%)
Query: 78 KALSLNPSLHSASLNSIEGIISFLQSKGILQKDLPRIFGMCPKVLTANIKTDLEPVFNFL 137
K + P+L A++ +E +S L+ GI DL +I P+ + + D E + N+
Sbjct: 99 KLFTRRPALQRANVAQLEFKLSLLKPLGITSSDLVKILNCRPRFFSCRLVLD-ERI-NYF 156
Query: 138 SHDLEVPEHDFRKVINKCPRLLTSSARDQLKPALFYLQRLGF--KDLNALAYQDSVLLVS 195
L E R+VI + P L+ D++KPA+ Y + LGF +DL A+ L+
Sbjct: 157 MEILGSKEV-LRRVIIRNPSLMLYDLDDKIKPAIEYYKGLGFSQQDLVAMLISRPTLIPR 215
Query: 196 KVENTLIPKLKYLESIGFSKD 216
N K +Y+E G +++
Sbjct: 216 TNFNN--EKFEYIEKTGVTRE 234
>MGI|MGI:1913660 [details] [associations]
symbol:Mterfd1 "MTERF domain containing 1" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IMP] MGI:MGI:1913660 GO:GO:0005739 GO:GO:0045892
GO:GO:0006351 GO:GO:0044212 CTD:51001 eggNOG:NOG246142
HOGENOM:HOG000044443 HOVERGEN:HBG062577 KO:K15032 OrthoDB:EOG4CRM08
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 OMA:TRVAYLQ
EMBL:AK010525 EMBL:AK011934 EMBL:BC025173 EMBL:BC085282
IPI:IPI00109282 RefSeq:NP_079823.2 UniGene:Mm.347939
ProteinModelPortal:Q8R3J4 SMR:Q8R3J4 STRING:Q8R3J4 PRIDE:Q8R3J4
DNASU:66410 Ensembl:ENSMUST00000021991 GeneID:66410 KEGG:mmu:66410
UCSC:uc007qzw.2 GeneTree:ENSGT00390000005801 InParanoid:Q8R3J4
NextBio:321609 Bgee:Q8R3J4 CleanEx:MM_MTERFD1 Genevestigator:Q8R3J4
GermOnline:ENSMUSG00000021519 Uniprot:Q8R3J4
Length = 412
Score = 130 (50.8 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 43/160 (26%), Positives = 80/160 (50%)
Query: 43 SLLQNHPLYPPTQANLSFQ--IKEKILCLEIMGVDS---GKALSLNPSLHSASLNSIEGI 97
S ++ HP L F+ IK+ +L L+ +G++ G L+ N ++ S L +++
Sbjct: 162 SKIEKHPDAANLLLRLDFEKHIKQILLFLKDLGLEDNQLGPFLTKNYAIFSEDLENLKTR 221
Query: 98 ISFLQSKGILQKDLPRIFGMCPKVLTANIKTDLEPVFNFLSHDLEVPEHDFRKVINKCPR 157
+++LQSK + D+ R+ P +L+ +++ L+ F +LE+ R ++ + PR
Sbjct: 222 VAYLQSKNFSKTDIARMVKNAPFLLSFSVER-LDNRLGFFQKELELNVKKTRDLVVRLPR 280
Query: 158 LLTSSARDQLKPALFYLQRLGFKDLNALAYQDSVLLVSKV 197
LLT S + Y LGFK N + Q V+ + K+
Sbjct: 281 LLTGSLEPVKENMKVYHLELGFKH-NEI--QHMVIKIPKM 317
>TAIR|locus:2177734 [details] [associations]
symbol:AT5G64950 "AT5G64950" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 EMBL:AB019236 KO:K15032
InterPro:IPR003690 Pfam:PF02536 SMART:SM00733 IPI:IPI00545204
RefSeq:NP_201300.1 UniGene:At.28929 ProteinModelPortal:Q9LV83
EnsemblPlants:AT5G64950.1 GeneID:836619 KEGG:ath:AT5G64950
TAIR:At5g64950 InParanoid:Q9LV83 OMA:MSEFLIT PhylomeDB:Q9LV83
ProtClustDB:CLSN2686446 Genevestigator:Q9LV83 Uniprot:Q9LV83
Length = 391
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 58/215 (26%), Positives = 99/215 (46%)
Query: 73 GVDSGKALSLNPSLHSASLNSIEGIISFLQS-KGIL---QKDLPRIFGMCP-KVLTANIK 127
G GK +S N S+ SL ++ +I ++ K I+ +DLP I C +L+ +
Sbjct: 121 GSGLGKFVSQNSSVVGVSL--VKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPN 178
Query: 128 TDLEPVFNFLSHDLEVPEHDFRKVINKCPRLLTSSARDQLKPALFYLQRLGFKDLNALAY 187
L P ++L + ++ + PR+ S ++L+ + LGF LN+
Sbjct: 179 LFLLPNISYLE-TCGIVGSQLASLLRRQPRIFNLS-EEKLRGYVSRALDLGFT-LNSRML 235
Query: 188 QDSVLLVSKV-ENTLIPKLKYLESIGFSKDEAVLMVLRCPGLFTFSIENNFKPKFEYFNX 246
+V+ +S + E T K+K + GFS+DE ++ R PGL S E+ FE++
Sbjct: 236 VHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCS-EDKLTLGFEFYLK 294
Query: 247 XXXXXXXXXXXFPQYFAFSLEKRIKPRH--MQALR 279
P +++LEKR+ PR +Q LR
Sbjct: 295 RMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILR 329
>RGD|735158 [details] [associations]
symbol:Mterfd1 "MTERF domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005739 "mitochondrion" evidence=ISO;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;ISS] RGD:735158
GO:GO:0005739 GO:GO:0045892 GO:GO:0006351 GO:GO:0044212 CTD:51001
eggNOG:NOG246142 HOGENOM:HOG000044443 HOVERGEN:HBG062577 KO:K15032
OrthoDB:EOG4CRM08 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
EMBL:BC062080 IPI:IPI00400733 RefSeq:NP_955419.1 UniGene:Rn.103375
STRING:Q6P6Q6 PRIDE:Q6P6Q6 GeneID:299514 KEGG:rno:299514
UCSC:RGD:735158 InParanoid:Q6P6Q6 NextBio:645359
ArrayExpress:Q6P6Q6 Genevestigator:Q6P6Q6
GermOnline:ENSRNOG00000004492 Uniprot:Q6P6Q6
Length = 409
Score = 126 (49.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 45/177 (25%), Positives = 86/177 (48%)
Query: 43 SLLQNHPLYPPTQANLSFQ--IKEKILCLEIMGVDS---GKALSLNPSLHSASLNSIEGI 97
S ++ HP L+F+ IK+ +L L+ +G++ G L+ N ++ S L +++
Sbjct: 159 SKIEKHPDVANLLLRLNFEKDIKQILLFLKDLGLEDNQLGPFLTKNYAIFSEDLENLKTR 218
Query: 98 ISFLQSKGILQKDLPRIFGMCPKVLTANIKTDLEPVFNFLSHDLEVPEHDFRKVINKCPR 157
+++LQSK + D+ + P +L+ +++ L+ F +LE+ R ++ + PR
Sbjct: 219 VAYLQSKNFSKTDIACMVKNAPFLLSFSVER-LDNRLGFFQKELELSVKKTRDLVVRLPR 277
Query: 158 LLTSSARDQLKPALFYLQRLGFKDLNALAYQDSVLLVSKVENTLIP-KLKYLESIGF 213
LLT S + Y LGFK N + + +V+K+ L K K E+ +
Sbjct: 278 LLTGSLEPVKENMKVYRLELGFKH-NEIQH-----MVTKIPKMLTANKRKLTETFDY 328
>UNIPROTKB|E2RL82 [details] [associations]
symbol:MTERFD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] GO:GO:0005739
GO:GO:0044212 CTD:51001 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 OMA:TRVAYLQ GeneTree:ENSGT00390000005801
EMBL:AAEX03015990 RefSeq:XP_003433727.1 Ensembl:ENSCAFT00000015040
GeneID:100684270 KEGG:cfa:100684270 Uniprot:E2RL82
Length = 417
Score = 126 (49.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 55/243 (22%), Positives = 108/243 (44%)
Query: 35 IHLSTKPKSLLQNHPLYPPTQANLSFQ--IKEKILCLEIMGVDS---GKALSLNPSLHSA 89
+HL S ++ HP L F+ IK+ ++ L+ +G++ G L+ N ++ S
Sbjct: 160 VHLGVD-LSKIEKHPEAANLLLRLDFEKDIKQILMFLKDLGIEDNQLGPYLTKNYAIFSE 218
Query: 90 SLNSIEGIISFLQSKGILQKDLPRIFGMCPKVLTANIKTDLEPVFNFLSHDLEVPEHDFR 149
L +++ +++LQSK + + ++ P +L+ +++ L+ F +LE+ R
Sbjct: 219 DLENLKTRVAYLQSKNFSKAQIAQMVRNAPFLLSFSVER-LDNRLGFFQKELELSVKKTR 277
Query: 150 KVINKCPRLLTSSARDQLKPALFYLQRLGFKDLNALAYQDSVLLVSKVENTLIP-KLKYL 208
++ + PRLLT S + Y LGFK N + + ++++V L K K
Sbjct: 278 DLVVRLPRLLTGSLEPVKENMKVYRLELGFKH-NEIQH-----MITRVPKMLTANKRKLT 331
Query: 209 ESIGFSKDEAVL---MVLRCPGLFTFSIENNFKPKFEYFNXXXXXXXXXXXXFPQYFAFS 265
E+ + + + +++R P +F + FK K + P Y S
Sbjct: 332 ETFDYVHNVMNIPHHLIVRFPQVFNTRL---FKVKERHLFLTYLGRAQYDPTKPNYI--S 386
Query: 266 LEK 268
L+K
Sbjct: 387 LDK 389
>UNIPROTKB|Q1LZE3 [details] [associations]
symbol:MTERFD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] GO:GO:0005739 GO:GO:0044212 CTD:51001
eggNOG:NOG246142 HOGENOM:HOG000044443 HOVERGEN:HBG062577 KO:K15032
OrthoDB:EOG4CRM08 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
OMA:TRVAYLQ GeneTree:ENSGT00390000005801 EMBL:DAAA02039445
EMBL:BC116050 IPI:IPI00697939 RefSeq:NP_001069349.1
UniGene:Bt.53018 Ensembl:ENSBTAT00000001994 GeneID:526138
KEGG:bta:526138 InParanoid:Q1LZE3 NextBio:20874312 Uniprot:Q1LZE3
Length = 417
Score = 121 (47.7 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 55/240 (22%), Positives = 112/240 (46%)
Query: 43 SLLQNHPLYPPTQANLSFQ--IKEKILCLEIMGVDS---GKALSLNPSLHSASLNSIEGI 97
S ++ HP L F+ IK+ +L L+ +G++ G L+ N ++ S L +++
Sbjct: 167 SKIEKHPDAANLLLRLDFEKDIKQMLLLLKDLGIEDTQLGPFLTKNYAIFSEDLENLKTR 226
Query: 98 ISFLQSKGILQKDLPRIFGMCPKVLTANIKTDLEPVFNFLSHDLEVPEHDFRKVINKCPR 157
+++LQSK + D+ ++ P +L+ + + L+ F +L++ R ++ + PR
Sbjct: 227 VAYLQSKNFSKADIAQMVRNAPFLLSFSAER-LDNRLGFFQKELKLSVKKTRDLVIRLPR 285
Query: 158 LLTSS---ARDQLKPALFYLQRLGFKDLNALAYQDSVLLVSKVENTLIP-KLKYLESIGF 213
LLT S ++ +K +F L+ LGF+ N + + +++K+ L K K E+ +
Sbjct: 286 LLTGSLEPVKENMK--VFQLE-LGFQQ-NEIQH-----MITKIPKMLTANKRKLTETFDY 336
Query: 214 SKDEAVL---MVLRCPGLFTFSIENNFKPKFEYFNXXXXXXXXXXXXFPQYFAFSLEKRI 270
+ + +++R P +F + FK K + P Y SL+K +
Sbjct: 337 VHNVMRVPHHVIVRFPQVFNTRL---FKVKERHLFLAYLGRAQYDPTEPNYI--SLDKLV 391
>TAIR|locus:2018062 [details] [associations]
symbol:AT1G62150 "AT1G62150" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND]
EMBL:CP002684 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 HOGENOM:HOG000113939 ProtClustDB:CLSN2682053
EMBL:BT005682 EMBL:AK118965 IPI:IPI00535716 RefSeq:NP_176406.1
UniGene:At.10248 ProteinModelPortal:Q8GWB0 PRIDE:Q8GWB0
EnsemblPlants:AT1G62150.1 GeneID:842511 KEGG:ath:AT1G62150
TAIR:At1g62150 InParanoid:Q8GWB0 OMA:YSENRII PhylomeDB:Q8GWB0
ArrayExpress:Q8GWB0 Genevestigator:Q8GWB0 Uniprot:Q8GWB0
Length = 463
Score = 118 (46.6 bits), Expect = 0.00025, P = 0.00025
Identities = 48/176 (27%), Positives = 78/176 (44%)
Query: 130 LEPVFNFLSHDLEVPEHDFRKVINKCPRLLTSSARDQLKPALFYLQRLGFKDLNALA-YQ 188
LE FN + +D ++ KCP L S +++ L+R G + L+ ++
Sbjct: 265 LEENFNVYKR-FGLTVNDVWELFKKCPAFLGYS-ENRIIQTFEALKRCGLCEDEVLSVFK 322
Query: 189 DSVLLVSKVENTLIPKLKYLESIGFSKDEAVLMVLRCPGLFTFSIENNFKPKFEYFNXXX 248
+ L + E ++ ++ +GFS+DE V+MV P +S E K K E+
Sbjct: 323 KNPLCLRASEQQILNSMETFIGLGFSRDEFVMMVKCLPQCIGYSAEM-VKKKTEFVVKKM 381
Query: 249 XXXXXXXXXFPQYFAFSLEKRIKPRH--MQALRNGARLS--LPVM---LKTSDEEF 297
FPQ +S+EKR PR ++AL + L LP M L +D+ F
Sbjct: 382 NWPLKVITLFPQVLGYSMEKRTVPRCNVIKALMSKGLLGSELPPMASVLACTDQTF 437
>TAIR|locus:2102827 [details] [associations]
symbol:AT3G46950 "AT3G46950" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL096859
KO:K15032 InterPro:IPR003690 Pfam:PF02536 SMART:SM00733
UniGene:At.28750 UniGene:At.48743 HOGENOM:HOG000113939
ProtClustDB:CLSN2682053 EMBL:AY045902 EMBL:AY117265 IPI:IPI00540395
PIR:T12953 RefSeq:NP_190279.1 ProteinModelPortal:Q9STG7
PaxDb:Q9STG7 PRIDE:Q9STG7 EnsemblPlants:AT3G46950.1 GeneID:823848
KEGG:ath:AT3G46950 TAIR:At3g46950 eggNOG:NOG316991
InParanoid:Q9STG7 OMA:ENPPISS PhylomeDB:Q9STG7 ArrayExpress:Q9STG7
Genevestigator:Q9STG7 Uniprot:Q9STG7
Length = 450
Score = 89 (36.4 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 30/107 (28%), Positives = 49/107 (45%)
Query: 198 ENTLIPKLKYLESIGFSKDEAVLMVLRCPGLFTFSIENNFKPKFEYFNXXXXXXXXXXXX 257
E ++ ++ +GFS+D+ +MV R P +S E + KFE
Sbjct: 320 EQKILDSIEMFLGLGFSRDDFKMMVKRYPCCTAYSGET-LRKKFEVLVKMMNWPLEAVVM 378
Query: 258 FPQYFAFSLEKRIKPRH--MQALRNGARLSL---PV--MLKTSDEEF 297
P +SLEKRI PR ++AL + + P+ +L +D+EF
Sbjct: 379 IPTVLGYSLEKRIVPRSNVIKALMSKGLIGSENPPISSVLVCTDQEF 425
Score = 68 (29.0 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 18/105 (17%), Positives = 46/105 (43%)
Query: 69 LEIMGVDSGKALSLNPSLHSASLNSIEGIISFLQSKGILQKDLPRIFGMCPKVLTANIKT 128
+E +G+ A +++ + + + +++ L+S G + RI P++L + +
Sbjct: 59 VESLGLTKKLAETISKKVTFEDKVNPDSVLNLLRSNGFKDSQISRIIRAYPRLLVTDAEK 118
Query: 129 DLEPVFNFLSHDLEVPEHDFRKVINKCPRLLTSSARDQLKPALFY 173
L P FL + ++++ P +L + + +L+Y
Sbjct: 119 SLRPKLQFLK-SRGASSSEVIEIVSNVPTILDKKGEESV--SLYY 160
>TAIR|locus:2036878 [details] [associations]
symbol:AT1G61990 "AT1G61990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
EMBL:AC004392 KO:K15032 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 HOGENOM:HOG000113939 ProtClustDB:CLSN2682053
EMBL:AF462848 EMBL:BT000861 IPI:IPI00547257 PIR:T02143
RefSeq:NP_176390.1 UniGene:At.28258 UniGene:At.74237
UniGene:At.74283 ProteinModelPortal:O80704 SMR:O80704 PaxDb:O80704
PRIDE:O80704 EnsemblPlants:AT1G61990.1 GeneID:842494
KEGG:ath:AT1G61990 TAIR:At1g61990 eggNOG:NOG240230
InParanoid:O80704 OMA:QMSEKTI PhylomeDB:O80704
Genevestigator:O80704 Uniprot:O80704
Length = 414
Score = 113 (44.8 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 55/203 (27%), Positives = 91/203 (44%)
Query: 113 RIFGMCPKVLTANIKTDLEPVF---NFLSHDLEVPEHDFRKVINK---CPRLLTSSARDQ 166
R GM ++L + + +PV NF + +V E F K R+L +
Sbjct: 190 RELGMPSRLLLPLLVSKSQPVCGKENFDASLKKVVEMGFDPTTTKFVLALRMLYQMSEKT 249
Query: 167 LKPALFYLQRLGFK--DL-NALAYQDSVLLVSKVENTLIPKLKYLESIGFSKDEAVLMVL 223
++ + + LGF D+ SVL VSK + ++ + +G+S+ E ++MV
Sbjct: 250 IEEKVVVFRSLGFTVDDVWEIFKKTPSVLKVSKKK--ILKSAETFLDLGYSRAEFLMMVK 307
Query: 224 RCPGLFTFSIENNFKPKFEYFNXXXXXXXXXXXXFPQYFAFSLEKRIKPRH--MQAL--- 278
R P +S+E+ K K E+ PQ F +S+EKRI PR ++AL
Sbjct: 308 RYPPCIEYSVES-VKKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNILEALLSK 366
Query: 279 ---RNGARL-SLPVMLKTSDEEF 297
R G+ L ++ +L +DE F
Sbjct: 367 GLLRKGSELPAVSSVLSCTDEGF 389
Score = 40 (19.1 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 98 ISFLQSKGILQKDLPRIFGMCPKVL 122
+ LQS+G ++ I P++L
Sbjct: 124 LQILQSRGASSSEITEIVSTVPRIL 148
>GENEDB_PFALCIPARUM|PF07_0113 [details] [associations]
symbol:PF07_0113 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] EMBL:AL844506 InterPro:IPR003690
Pfam:PF02536 SMART:SM00733 RefSeq:XP_001349172.1
ProteinModelPortal:Q8IBI2 EnsemblProtists:PF07_0113:mRNA
GeneID:2655166 KEGG:pfa:PF07_0113 EuPathDB:PlasmoDB:PF3D7_0727500
HOGENOM:HOG000283859 ProtClustDB:CLSZ2500653 Uniprot:Q8IBI2
Length = 707
Score = 116 (45.9 bits), Expect = 0.00074, P = 0.00074
Identities = 35/129 (27%), Positives = 53/129 (41%)
Query: 149 RKVINKCPRLLTSSARDQLKPALFYLQRLGF--KDLNALAYQDSVLLVSKVENTLIPKLK 206
+K+I PRL + +K Y LG+ K+L + Y +L
Sbjct: 495 KKIIYTSPRLSLINKNTIIKRLKHYKNELGYDYKELQHILYNIPQFFAFGNLKKKYKELL 554
Query: 207 YLESIGFSKDEAVLMVLRCPGLFTFSIENNFKPKFEYFNXXXXXXXXXXXXFPQYFAFSL 266
Y+ KD L+ + P +FT++I +PK Y FPQYF++S
Sbjct: 555 YIHETIKEKDLQKLIKMY-PRIFTYNIYRTIRPKLLYLILHLNKHFHDTLLFPQYFSYSF 613
Query: 267 EKRIKPRHM 275
RI PRH+
Sbjct: 614 RLRIIPRHI 622
>UNIPROTKB|Q8IBI2 [details] [associations]
symbol:PF07_0113 "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] EMBL:AL844506 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 RefSeq:XP_001349172.1 ProteinModelPortal:Q8IBI2
EnsemblProtists:PF07_0113:mRNA GeneID:2655166 KEGG:pfa:PF07_0113
EuPathDB:PlasmoDB:PF3D7_0727500 HOGENOM:HOG000283859
ProtClustDB:CLSZ2500653 Uniprot:Q8IBI2
Length = 707
Score = 116 (45.9 bits), Expect = 0.00074, P = 0.00074
Identities = 35/129 (27%), Positives = 53/129 (41%)
Query: 149 RKVINKCPRLLTSSARDQLKPALFYLQRLGF--KDLNALAYQDSVLLVSKVENTLIPKLK 206
+K+I PRL + +K Y LG+ K+L + Y +L
Sbjct: 495 KKIIYTSPRLSLINKNTIIKRLKHYKNELGYDYKELQHILYNIPQFFAFGNLKKKYKELL 554
Query: 207 YLESIGFSKDEAVLMVLRCPGLFTFSIENNFKPKFEYFNXXXXXXXXXXXXFPQYFAFSL 266
Y+ KD L+ + P +FT++I +PK Y FPQYF++S
Sbjct: 555 YIHETIKEKDLQKLIKMY-PRIFTYNIYRTIRPKLLYLILHLNKHFHDTLLFPQYFSYSF 613
Query: 267 EKRIKPRHM 275
RI PRH+
Sbjct: 614 RLRIIPRHI 622
>TAIR|locus:2037338 [details] [associations]
symbol:AT1G74120 "AT1G74120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 InterPro:IPR003690 Pfam:PF02536
SMART:SM00733 EMBL:AC079678 IPI:IPI00521430 PIR:C96769
RefSeq:NP_565080.1 UniGene:At.66135 ProteinModelPortal:Q9C6A1
PRIDE:Q9C6A1 EnsemblPlants:AT1G74120.1 GeneID:843752
KEGG:ath:AT1G74120 TAIR:At1g74120 HOGENOM:HOG000006334
InParanoid:Q9C6A1 OMA:FRAGFEV PhylomeDB:Q9C6A1
ProtClustDB:CLSN2689192 ArrayExpress:Q9C6A1 Genevestigator:Q9C6A1
Uniprot:Q9C6A1
Length = 445
Score = 113 (44.8 bits), Expect = 0.00085, P = 0.00085
Identities = 59/256 (23%), Positives = 111/256 (43%)
Query: 61 QIKEKILCLEIMGV-DS--GKALSLNPSLHSASLNSIEGIISFLQSKGILQKDLPRIFGM 117
+ E + L+ +G DS + LS P + + I I FL GI + ++ R F +
Sbjct: 146 KFNECVRVLKSLGFCDSTVSRILSSFPGVLLVNEIEIRRKIEFLVGIGIARDNIERFFHV 205
Query: 118 CPKVLTANIKTDLEPVFN-FLSHDLEVPEHDFRKVINKCPRLLTSSARDQLKPALFYLQR 176
P+VL +T L+P+ + F+ + + D +K I + PR+L +L L +
Sbjct: 206 FPEVLGIGTETRLKPLLDEFMK--MGFSKDDVKKEIAREPRVLGLEL-GELPRCLELINT 262
Query: 177 LGFKDLNALAYQDSVLLVSKVENTLIPKLKYLESIGFSKDEAVLMVLRCPGLFTFSIENN 236
L +++ ++ + E L ++ L G + +A +V + P + + IE+
Sbjct: 263 LKCREVIRVSIISEGAFRAGFEVKL--RVDCLCKYGLIRRDAFKVVWKEPRVILYEIED- 319
Query: 237 FKPKFEYFNXXXXXXXXXXXXFPQYFAFSLEKRIKPRH----MQALRN--GARLSLPVML 290
+ K E+ P+Y +L+K+I PR+ L+ G + L ++
Sbjct: 320 IEKKIEFLTNRMGFHINCLADVPEYLGVNLQKQIVPRYNVIDYLKLKGGLGCDIGLKGLI 379
Query: 291 KTSDEEFNEL-IKPKP 305
K S + F L + P P
Sbjct: 380 KPSMKRFYNLYVMPYP 395
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 308 278 0.00081 115 3 11 22 0.47 33
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 574 (61 KB)
Total size of DFA: 173 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.92u 0.10s 24.02t Elapsed: 00:00:01
Total cpu time: 23.93u 0.10s 24.03t Elapsed: 00:00:01
Start: Fri May 10 05:26:18 2013 End: Fri May 10 05:26:19 2013