BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035720
(217 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224115598|ref|XP_002317075.1| predicted protein [Populus trichocarpa]
gi|222860140|gb|EEE97687.1| predicted protein [Populus trichocarpa]
Length = 229
Score = 352 bits (904), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 176/229 (76%), Positives = 197/229 (86%), Gaps = 12/229 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR+RPVTLSKTKKKG+EHKE IVNSIR+AVE Y SIYVFSFENMRNLKFKEFREQ
Sbjct: 1 MPKSKRNRPVTLSKTKKKGREHKESIVNSIRDAVEKYNSIYVFSFENMRNLKFKEFREQH 60
Query: 61 KPSRLLWVG-----RYPMRYSQA-------YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + ++G + + S A +KVSK LCG++GLFLTN+ +EEVE LFN+Y
Sbjct: 61 KLTSRFFLGSNKVMQVSLGRSAADEIRPGLHKVSKLLCGDSGLFLTNLSREEVERLFNEY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
E+YDFARTG+TATE VEL EGPLEQFTHEMEPFLRKQGMPVRLNKGV++LVS+FVVCEEG
Sbjct: 121 EEYDFARTGTTATEMVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGVIDLVSNFVVCEEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVESA 217
KPLSPES+RILRLLG KMATF+LHLICRWS EDFELYREGLDESDVESA
Sbjct: 181 KPLSPESSRILRLLGTKMATFRLHLICRWSPEDFELYREGLDESDVESA 229
>gi|224056765|ref|XP_002299012.1| predicted protein [Populus trichocarpa]
gi|118486150|gb|ABK94918.1| unknown [Populus trichocarpa]
gi|222846270|gb|EEE83817.1| predicted protein [Populus trichocarpa]
Length = 229
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 177/229 (77%), Positives = 194/229 (84%), Gaps = 12/229 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR+RPVTLSKTKKKG+EHKE IVNSIR+AVE Y SIYVFSFENMRNLKFKEFREQ
Sbjct: 1 MPKSKRNRPVTLSKTKKKGREHKESIVNSIRDAVEKYNSIYVFSFENMRNLKFKEFREQH 60
Query: 61 KPSRLLWVG-----RYPMRYSQA-------YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + ++G + + S A +KVSK LCG+ GLFLTN+P+EEVE LFN+Y
Sbjct: 61 KLTSRFFLGSNKVMQVSLGRSAADEIRPGLHKVSKLLCGDAGLFLTNLPREEVERLFNEY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
E+YDFARTG+TATE VEL EGPLEQFTHEMEPFLRKQGMPVRLNKGV+ELVSDFVV EEG
Sbjct: 121 EEYDFARTGTTATETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGVIELVSDFVVSEEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVESA 217
KPLSPE ARILRLLG K ATFKLHLICRWS EDFELYREGLD+SDVESA
Sbjct: 181 KPLSPECARILRLLGTKTATFKLHLICRWSPEDFELYREGLDDSDVESA 229
>gi|225448095|ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [Vitis vinifera]
gi|298204604|emb|CBI23879.3| unnamed protein product [Vitis vinifera]
Length = 229
Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/229 (75%), Positives = 195/229 (85%), Gaps = 12/229 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRDRPVTLSKTKKKG+ HKE IVNSIR AVENY SIYVFSFENMRNLKFKEFRE++
Sbjct: 1 MPKSKRDRPVTLSKTKKKGRGHKESIVNSIRQAVENYSSIYVFSFENMRNLKFKEFREKL 60
Query: 61 KPSRLLWVG-----RYPMRYSQA-------YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + ++G + + S A KVSK L G+TGLF TN+PKEEV+ LFN+Y
Sbjct: 61 KSTSRFFLGSNKVMQIAIGRSVADEIRPGLRKVSKLLHGDTGLFFTNLPKEEVQRLFNEY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
E+YDFARTGSTA EKVEL EGPL+QFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG
Sbjct: 121 EEYDFARTGSTAVEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVESA 217
PLSPESARILRLLGIKMATF+LHL+CRWS ++F+LY+EGLD+SDVES+
Sbjct: 181 TPLSPESARILRLLGIKMATFRLHLVCRWSPDEFDLYKEGLDDSDVESS 229
>gi|388491758|gb|AFK33945.1| unknown [Lotus japonicus]
Length = 229
Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 159/229 (69%), Positives = 187/229 (81%), Gaps = 12/229 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR++ VTLSKTKKKG+EHKEVIVN+IR+A E Y S+YVFSFENMRNLKFKEFR+++
Sbjct: 1 MPKSKRNKQVTLSKTKKKGREHKEVIVNAIRDAAEKYSSLYVFSFENMRNLKFKEFRDRL 60
Query: 61 KPSRLLWVGRYPMRY------------SQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K S ++G + + YKVSK L G++G+F TN+ KEEVE LFN Y
Sbjct: 61 KSSSRFFLGSNKVMQVALGRSASDEIKPRLYKVSKLLRGDSGMFFTNLSKEEVERLFNGY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
E+YDFARTG ATEKV+L EGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSD VVCEEG
Sbjct: 121 EEYDFARTGGIATEKVDLQEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDLVVCEEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVESA 217
KPLSPE++RILRLLGIKMATF+LHL+CRW+ +DFELY +G +SDVE +
Sbjct: 181 KPLSPEASRILRLLGIKMATFRLHLVCRWTPDDFELYIDGPGDSDVECS 229
>gi|346466455|gb|AEO33072.1| hypothetical protein [Amblyomma maculatum]
Length = 262
Score = 312 bits (800), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 154/222 (69%), Positives = 181/222 (81%), Gaps = 12/222 (5%)
Query: 8 RPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLW 67
+ VTLSKTKKKG++HKEVIV+SI+ A+E++ S YVF+FENMRN KFKEFREQ+K + +
Sbjct: 41 KAVTLSKTKKKGRQHKEVIVSSIKQALEDHGSAYVFTFENMRNQKFKEFREQLKSNSRFF 100
Query: 68 VGRYP-MRYSQA-----------YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFAR 115
+G M+ S +K+SKFL G+ GL TN+ KEEV+ F KYED+DFAR
Sbjct: 101 LGSNKVMQISLGRSVADETKPGIHKLSKFLRGDAGLLFTNLEKEEVQRTFEKYEDHDFAR 160
Query: 116 TGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPES 175
TGS ATEKVEL EGPLEQFTHEMEPFLRKQGMPVRL KGVVELVSDFVVCEEGKPLSPES
Sbjct: 161 TGSNATEKVELKEGPLEQFTHEMEPFLRKQGMPVRLTKGVVELVSDFVVCEEGKPLSPES 220
Query: 176 ARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVESA 217
ARILRLLGIKMA F+LHL+CRW+ +DFE+YREGLD SD+ES+
Sbjct: 221 ARILRLLGIKMAPFRLHLVCRWTPDDFEVYREGLDLSDIESS 262
>gi|18395622|ref|NP_564226.1| Ribosomal protein L10 family protein [Arabidopsis thaliana]
gi|15028333|gb|AAK76643.1| unknown protein [Arabidopsis thaliana]
gi|19310645|gb|AAL85053.1| unknown protein [Arabidopsis thaliana]
gi|21593993|gb|AAM65913.1| unknown [Arabidopsis thaliana]
gi|332192473|gb|AEE30594.1| Ribosomal protein L10 family protein [Arabidopsis thaliana]
Length = 235
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 160/235 (68%), Positives = 180/235 (76%), Gaps = 18/235 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRDRPVTLSKTKKKG+EHKE IVN IR AVE Y S+YVFSFENMRN+KFKEFR+Q
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKECIVNGIREAVEKYSSVYVFSFENMRNIKFKEFRQQF 60
Query: 61 KPSRLLWVGRYPMRY------------SQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
+ + ++G + S YKVSK L G+TGL +T+MPKEEVESLFN Y
Sbjct: 61 RHNGKFFLGSNKVMQVALGRSAEDELRSGIYKVSKLLRGDTGLLVTDMPKEEVESLFNAY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
ED DF+RTGS A E VEL EGPLEQFTHEMEP LRK MPVRLNKG VELV+DFVVCEEG
Sbjct: 121 EDSDFSRTGSIAVETVELKEGPLEQFTHEMEPLLRKLEMPVRLNKGTVELVADFVVCEEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDE------SDVESA 217
K LSP+SA ILRLL +KMATFKL+L+CRWS DFELYRE L E SDVE++
Sbjct: 181 KQLSPKSAHILRLLRMKMATFKLNLLCRWSPSDFELYREDLSELYREDLSDVETS 235
>gi|76160923|gb|ABA40425.1| unknown [Solanum tuberosum]
gi|413968558|gb|AFW90616.1| putative ribosomal protein L1 [Solanum tuberosum]
Length = 229
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 161/229 (70%), Positives = 191/229 (83%), Gaps = 12/229 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR+R VTLSKTKKKGKEHKE IVNSIR E Y S YVFSFENMRNLKFKEFR+Q+
Sbjct: 1 MPKSKRNRAVTLSKTKKKGKEHKENIVNSIRECAEKYSSAYVFSFENMRNLKFKEFRDQL 60
Query: 61 KPSRLLWVG-----RYPMRYSQA-------YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K S ++G + + S + +K+SK + G++GL TN+ KEEV+ LFN+Y
Sbjct: 61 KSSSRFFLGSNKVMQVALGRSDSDEIRPGLHKISKLVRGDSGLCFTNLSKEEVQRLFNEY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
E++DFARTG+TATEKVEL EGPL+QFTHEMEPFLRKQGMPVRLN+GVVELVSDFVVCEEG
Sbjct: 121 EEHDFARTGTTATEKVELQEGPLDQFTHEMEPFLRKQGMPVRLNRGVVELVSDFVVCEEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVESA 217
+PLSPE+ARILRLLG KMATF+LHLICRWS ++FE+YREGL+ESD+ES+
Sbjct: 181 RPLSPEAARILRLLGKKMATFRLHLICRWSPDEFEIYREGLEESDIESS 229
>gi|357445637|ref|XP_003593096.1| mRNA turnover protein-like protein [Medicago truncatula]
gi|124360427|gb|ABN08437.1| Ribosomal protein L10 [Medicago truncatula]
gi|355482144|gb|AES63347.1| mRNA turnover protein-like protein [Medicago truncatula]
gi|388513309|gb|AFK44716.1| unknown [Medicago truncatula]
Length = 228
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/228 (66%), Positives = 180/228 (78%), Gaps = 13/228 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR++ VTLSKT KKG+ HKE+I+N IR+A E Y SIYVF+F+NMRN K KEFREQ+
Sbjct: 1 MPKSKRNKQVTLSKTTKKGRGHKELIINGIRDAAEKYSSIYVFNFQNMRNSKLKEFREQL 60
Query: 61 KPSRLLWVGRYPM------RYS------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
+ S ++G + R S +KVSK L G+ G+ TN+ KEEVE LFN++
Sbjct: 61 QSSSKFFLGSNKVMQVAIGRSSSDEIKPNLHKVSKLLRGDAGMIFTNLSKEEVERLFNEF 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
E YDFARTGS ATEKVEL EGPLEQFTH+MEPFLRKQGMPVRLNKGVVELVSDFVVCEEG
Sbjct: 121 EGYDFARTGSIATEKVELKEGPLEQFTHDMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAE-DFELYREGLDESDVE 215
KPLSPE++RILRL+G MATF+L+L+CRW +E DFELY +G +SDVE
Sbjct: 181 KPLSPEASRILRLMGNMMATFRLNLVCRWGSEDDFELYIDGPGDSDVE 228
>gi|11067271|gb|AAG28799.1|AC079374_2 unknown protein [Arabidopsis thaliana]
Length = 231
Score = 300 bits (767), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 157/235 (66%), Positives = 177/235 (75%), Gaps = 22/235 (9%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRDRPVTLSKTKKKG+EHKE IVN IR AVE Y S+YVFSFENMRN+KFKEFR+Q
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKECIVNGIREAVEKYSSVYVFSFENMRNIKFKEFRQQF 60
Query: 61 KPSRLLWVGRYPMRY------------SQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
+ + ++G + S YKVSK L G+TGL +T+MPKEEVESLFN Y
Sbjct: 61 RHNGKFFLGSNKVMQVALGRSAEDELRSGIYKVSKLLRGDTGLLVTDMPKEEVESLFNAY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
ED DF+RTGS A E EGPLEQFTHEMEP LRK MPVRLNKG VELV+DFVVCEEG
Sbjct: 121 EDSDFSRTGSIAVE----TEGPLEQFTHEMEPLLRKLEMPVRLNKGTVELVADFVVCEEG 176
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDE------SDVESA 217
K LSP+SA ILRLL +KMATFKL+L+CRWS DFELYRE L E SDVE++
Sbjct: 177 KQLSPKSAHILRLLRMKMATFKLNLLCRWSPSDFELYREDLSELYREDLSDVETS 231
>gi|217073168|gb|ACJ84943.1| unknown [Medicago truncatula]
Length = 228
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 150/228 (65%), Positives = 180/228 (78%), Gaps = 13/228 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR++ VTLSKT KKG+ HKE+I+N IR+A E Y SIYVF+F+NMRN K KEFREQ+
Sbjct: 1 MPKSKRNKQVTLSKTTKKGRGHKELIINGIRDAAEKYSSIYVFNFQNMRNSKLKEFREQL 60
Query: 61 KPSRLLWVGRYPM------RYS------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
+ S ++G + R S +KVSK L G+ G+ TN+ KEEVE LFN++
Sbjct: 61 QSSSKFFLGSNKVMQVAIGRSSSDEIKPNLHKVSKLLRGDAGMIFTNLSKEEVERLFNEF 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
E YDFARTGS ATEKVEL EGPLEQFTH+MEPFLR+QGMPVRLNKGVVELVSDFVVCEEG
Sbjct: 121 EGYDFARTGSIATEKVELKEGPLEQFTHDMEPFLRRQGMPVRLNKGVVELVSDFVVCEEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAE-DFELYREGLDESDVE 215
KPLSPE++RILRL+G MATF+L+L+CRW +E DFELY +G +SDVE
Sbjct: 181 KPLSPEASRILRLMGNMMATFRLNLVCRWGSEDDFELYIDGPGDSDVE 228
>gi|242069641|ref|XP_002450097.1| hypothetical protein SORBIDRAFT_05g000460 [Sorghum bicolor]
gi|241935940|gb|EES09085.1| hypothetical protein SORBIDRAFT_05g000460 [Sorghum bicolor]
Length = 231
Score = 288 bits (737), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 139/222 (62%), Positives = 179/222 (80%), Gaps = 13/222 (5%)
Query: 1 MPKSKRDRPVTLSKTKKK-GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKR+RPVTLSKTKKK G E K +V I++A++ Y S YVF+++NMRN K K+ REQ
Sbjct: 1 MPKSKRNRPVTLSKTKKKPGLERKGKVVAEIKDAIDKYSSAYVFTYDNMRNQKLKDLREQ 60
Query: 60 IKPSRLLWV----------GRYPMRYSQA--YKVSKFLCGNTGLFLTNMPKEEVESLFNK 107
+K S +++ GR P ++ +K+SKFL G++GLF TN+P+++VE +F +
Sbjct: 61 LKSSSRIFLAGKKVMQIALGRSPADEAKTGLHKLSKFLQGDSGLFFTNLPRDDVERMFRE 120
Query: 108 YEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEE 167
+E++DFARTGSTA E VEL EGPLEQFTHEMEPFLRKQG+PVRLNKGVVELV+D VVCEE
Sbjct: 121 FEEHDFARTGSTAAETVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVVELVADHVVCEE 180
Query: 168 GKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGL 209
GKPLSPE+A+ LRLLGI+MATF+L+L+CRWS +DFE+Y+EGL
Sbjct: 181 GKPLSPEAAQTLRLLGIQMATFRLYLVCRWSCDDFEVYKEGL 222
>gi|414588774|tpg|DAA39345.1| TPA: mRNA turnover protein 4 [Zea mays]
Length = 231
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/222 (62%), Positives = 178/222 (80%), Gaps = 13/222 (5%)
Query: 1 MPKSKRDRPVTLSKTKKK-GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKR+RPVTLSKTKKK G E K +V I++AV+ Y S YVF+++NMRN K K+ REQ
Sbjct: 1 MPKSKRNRPVTLSKTKKKPGLERKGKVVAEIKDAVDKYSSAYVFTYDNMRNQKLKDLREQ 60
Query: 60 IKPS-RLLWVGRYPMRYSQA-----------YKVSKFLCGNTGLFLTNMPKEEVESLFNK 107
+K S R+ G+ M+ + +K+SKFL GN+GL TN+P+++VE +F +
Sbjct: 61 LKSSSRIFLAGKKVMQIALGRSAADEAKTGLHKLSKFLQGNSGLLFTNLPRDDVERMFRE 120
Query: 108 YEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEE 167
+E++DFARTGSTA + VEL EGPLEQFTHEMEPFLRKQG+PVRLNKGVVELV+D VVCEE
Sbjct: 121 FEEHDFARTGSTAADTVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVVELVADHVVCEE 180
Query: 168 GKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGL 209
GKPLSPE+A+ILRLLGI+MATF+L+L+CRWS+++FE Y+EGL
Sbjct: 181 GKPLSPEAAQILRLLGIQMATFRLYLVCRWSSDEFEAYKEGL 222
>gi|115483741|ref|NP_001065532.1| Os11g0105400 [Oryza sativa Japonica Group]
gi|77548268|gb|ABA91065.1| ribosomal protein L10 containing protein, expressed [Oryza sativa
Japonica Group]
gi|113644236|dbj|BAF27377.1| Os11g0105400 [Oryza sativa Japonica Group]
gi|125535490|gb|EAY81978.1| hypothetical protein OsI_37156 [Oryza sativa Indica Group]
gi|125578216|gb|EAZ19362.1| hypothetical protein OsJ_34914 [Oryza sativa Japonica Group]
gi|215695342|dbj|BAG90533.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 233
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 138/229 (60%), Positives = 181/229 (79%), Gaps = 13/229 (5%)
Query: 1 MPKSKRDRPVTLSKTKKK-GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKR+RPVTLSKTKKK G E K +V I++AVE+Y + YVF+++NMRN K K+ REQ
Sbjct: 1 MPKSKRNRPVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQ 60
Query: 60 IKPS-RLLWVGRYPMRYSQA-----------YKVSKFLCGNTGLFLTNMPKEEVESLFNK 107
+K S R+ G+ M+ + +K+SKFL G+TGLF TN+P+++VE LF +
Sbjct: 61 LKSSSRIFLAGKKVMQIALGRSSADEAKTGLHKLSKFLQGDTGLFFTNLPRDDVERLFRE 120
Query: 108 YEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEE 167
+E++DFARTGS TE VEL EGPLEQFTHEMEPFLRKQG+PVRLNKG VELV+D +VCEE
Sbjct: 121 FEEHDFARTGSIVTETVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGAVELVADHIVCEE 180
Query: 168 GKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVES 216
GKP+SPE+A+ LRLLG++MATF+L+L+CRWS++DFE+Y+EGL + E+
Sbjct: 181 GKPISPEAAQTLRLLGMQMATFRLYLVCRWSSDDFEVYKEGLAQLRAEA 229
>gi|194702330|gb|ACF85249.1| unknown [Zea mays]
gi|238015180|gb|ACR38625.1| unknown [Zea mays]
gi|414882023|tpg|DAA59154.1| TPA: hypothetical protein ZEAMMB73_797802 [Zea mays]
Length = 231
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 139/222 (62%), Positives = 178/222 (80%), Gaps = 13/222 (5%)
Query: 1 MPKSKRDRPVTLSKTKKK-GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKR+RPVTLSKTKKK G E K +V I++AV+ Y S YVF+++NMRN K K+ REQ
Sbjct: 1 MPKSKRNRPVTLSKTKKKPGLERKGKVVAEIKDAVDKYSSAYVFTYDNMRNQKLKDLREQ 60
Query: 60 IKPSRLLWV----------GRYPMRYSQA--YKVSKFLCGNTGLFLTNMPKEEVESLFNK 107
+K S +++ GR P ++ +K+SKFL GN+GL TN+P+++VE +F +
Sbjct: 61 LKSSSRIFLAGKKVMQIALGRSPADEAKTGLHKLSKFLQGNSGLLFTNLPRDDVERMFRE 120
Query: 108 YEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEE 167
+E++DFARTGSTA + VEL EGPLEQFTHEMEPFLRKQG+PVRLNKGVVELV+D VVCEE
Sbjct: 121 FEEHDFARTGSTAIDTVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVVELVADHVVCEE 180
Query: 168 GKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGL 209
GKPLSPE+A+ LRLLGI+MATF+L+L+CRWS +DFE+Y+EGL
Sbjct: 181 GKPLSPEAAQTLRLLGIQMATFRLYLVCRWSGDDFEVYKEGL 222
>gi|449459290|ref|XP_004147379.1| PREDICTED: mRNA turnover protein 4 homolog [Cucumis sativus]
Length = 249
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 147/220 (66%), Positives = 171/220 (77%), Gaps = 12/220 (5%)
Query: 10 VTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKP-SRLLWV 68
VTLSKTKKKG++HK+ +V IR AVENY S++VF+ ENMRNLKFKE REQ+K SRL +
Sbjct: 30 VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFG 89
Query: 69 GRYPMRYSQA-----------YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTG 117
M+ S +KVSK L GNTGL TN+PKEEVE LFN+YEDYD+ARTG
Sbjct: 90 ANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLPKEEVERLFNEYEDYDYARTG 149
Query: 118 STATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESAR 177
S A+EKVEL EGPL QF+HEMEP LRK G+PVRLNKGVVELVSDFVVCEEGK LSPESA
Sbjct: 150 SAASEKVELKEGPLGQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAG 209
Query: 178 ILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVESA 217
ILR LG++ A F+L+L+CRWS DFELY +G + SDVESA
Sbjct: 210 ILRALGLRTAIFRLNLVCRWSPGDFELYIDGPENSDVESA 249
>gi|357161328|ref|XP_003579055.1| PREDICTED: mRNA turnover protein 4 homolog [Brachypodium
distachyon]
Length = 235
Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 139/230 (60%), Positives = 177/230 (76%), Gaps = 13/230 (5%)
Query: 1 MPKSKRDRPVTLSKTKKK-GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKR+RPVTLSKTKKK G+E K +V I++A ENY S YVF++ NMRN K K+ R+Q
Sbjct: 1 MPKSKRNRPVTLSKTKKKPGQERKGRVVTEIKDAAENYSSAYVFTYNNMRNQKLKDLRDQ 60
Query: 60 IKPS-RLLWVGRYPMRYSQAY-----------KVSKFLCGNTGLFLTNMPKEEVESLFNK 107
+K S R+ G+ M+ + K+ KFL G++GL TN+P++EVESLF
Sbjct: 61 LKSSSRIFLAGKKVMQIALGRTAADEVKTGMRKLCKFLQGSSGLLFTNLPRDEVESLFRD 120
Query: 108 YEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEE 167
+E++DFARTG+ ATE VEL EGPLEQF+HEMEPFLRKQG+PVRLNKGVVELV+D VVCEE
Sbjct: 121 FEEHDFARTGTVATETVELKEGPLEQFSHEMEPFLRKQGLPVRLNKGVVELVADHVVCEE 180
Query: 168 GKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVESA 217
GKPLSPE+A LRLLG +MATF+L+L+CRWS +DFE+Y+EGL++ + A
Sbjct: 181 GKPLSPEAAHTLRLLGTRMATFRLYLVCRWSPDDFEVYKEGLEQLGADEA 230
>gi|226498542|ref|NP_001148655.1| mRNA turnover protein 4 [Zea mays]
gi|195621132|gb|ACG32396.1| mRNA turnover protein 4 [Zea mays]
Length = 231
Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 137/222 (61%), Positives = 177/222 (79%), Gaps = 13/222 (5%)
Query: 1 MPKSKRDRPVTLSKTKKK-GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSK +RPVTLSKTKKK G E K +V I++AV+ Y S YVF+++NMRN K K+ REQ
Sbjct: 1 MPKSKCNRPVTLSKTKKKPGLERKGKVVAEIKDAVDKYSSAYVFTYDNMRNQKLKDLREQ 60
Query: 60 IKPSRLLWV----------GRYPMRYSQA--YKVSKFLCGNTGLFLTNMPKEEVESLFNK 107
+K S +++ GR P ++ +K+SKFL GN+GL TN+P+++VE +F +
Sbjct: 61 LKSSSRIFLAGKKVMQIALGRSPADEAKTGLHKLSKFLQGNSGLLFTNLPRDDVERMFRE 120
Query: 108 YEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEE 167
+E++DFARTGSTA + VEL EGPLEQFTHEMEPFLRKQG+PVRLNKGVVELV+D VVCEE
Sbjct: 121 FEEHDFARTGSTAADTVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVVELVADHVVCEE 180
Query: 168 GKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGL 209
GKPLSPE+A+ LRLLGI+MATF+L+L+CRWS+++FE Y+EGL
Sbjct: 181 GKPLSPEAAQTLRLLGIQMATFRLYLVCRWSSDEFEAYKEGL 222
>gi|218186258|gb|EEC68685.1| hypothetical protein OsI_37142 [Oryza sativa Indica Group]
Length = 247
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 140/243 (57%), Positives = 183/243 (75%), Gaps = 27/243 (11%)
Query: 1 MPKSKRDRPVTLSKTKKK-GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKR+RPVTLSKTKKK G E K +V I++AVE+Y + YVF+++NMRN K K+ REQ
Sbjct: 1 MPKSKRNRPVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQ 60
Query: 60 IKPSRLLWV----------GRYPMRYSQA--YKVSKFLCGNTGLFLTNMPKEEVESLFNK 107
+K S +++ GR P ++ +K+SKFL G+TGLF TN+P+++VE LF +
Sbjct: 61 LKSSSRIFLAGKKVMQIALGRSPADEAKTGLHKLSKFLQGDTGLFFTNLPRDDVERLFRE 120
Query: 108 YEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEE 167
+E++DFARTGS ATE VEL EGPLEQFTHEMEPFLRKQGMPVRLNKG VELV+D +VCEE
Sbjct: 121 FEEHDFARTGSIATETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGAVELVADHIVCEE 180
Query: 168 GKPLSPESARIL--------------RLLGIKMATFKLHLICRWSAEDFELYREGLDESD 213
GKP+SPE+A+ L RLLG++MATF+L+L+CRWS++DFE+Y+EGL +
Sbjct: 181 GKPISPEAAQTLIGIFDDVNIVTKPMRLLGMQMATFRLYLVCRWSSDDFEVYKEGLAQLR 240
Query: 214 VES 216
E+
Sbjct: 241 AEA 243
>gi|116792405|gb|ABK26353.1| unknown [Picea sitchensis]
Length = 229
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 134/219 (61%), Positives = 174/219 (79%), Gaps = 12/219 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR++ VTLSKTKKKG+EHKE IVN +R A+E+Y S+YVFSFENMRN+KFK R+++
Sbjct: 1 MPKSKRNKMVTLSKTKKKGREHKESIVNQVRQALEDYISVYVFSFENMRNVKFKGLRDRL 60
Query: 61 KPSRLLWVG-----RYPMRYSQA-------YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K S ++G + + + A +K S+ L G+ GLF TN+PKEEV +F +
Sbjct: 61 KGSSRFFLGSNKVLQISLGRTAADEVKDGIHKASEMLHGDCGLFFTNLPKEEVMRVFETF 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
E++DFARTGS ATE +EL EGPLEQFTH+MEPFLRKQGMPVRLNKGVVELV+D VVC+EG
Sbjct: 121 EEHDFARTGSLATETIELKEGPLEQFTHDMEPFLRKQGMPVRLNKGVVELVADHVVCQEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYRE 207
+ +SPE++RIL LLG++MATF+L+L+CRWS +FE+YR+
Sbjct: 181 ERISPEASRILHLLGVQMATFRLNLVCRWSPAEFEIYRD 219
>gi|255575440|ref|XP_002528622.1| mRNA turnover protein 4 mrt4, putative [Ricinus communis]
gi|223531967|gb|EEF33780.1| mRNA turnover protein 4 mrt4, putative [Ricinus communis]
Length = 182
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 140/182 (76%), Positives = 151/182 (82%), Gaps = 12/182 (6%)
Query: 48 MRNLKFKEFREQIKPSRLLWVGRYP-MRYSQA-----------YKVSKFLCGNTGLFLTN 95
MRNLKFKEFREQ+K S ++G M+ S +KVSK L G+ GLFLTN
Sbjct: 1 MRNLKFKEFREQLKTSSRFFLGSNKVMQVSLGRTVADEVRPGIHKVSKLLRGDAGLFLTN 60
Query: 96 MPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGV 155
+PKEEVE LFN+YE+YDFARTGS ATEKVEL EGPLEQFTHEMEPFLRKQGMPVRLNKGV
Sbjct: 61 LPKEEVERLFNEYEEYDFARTGSIATEKVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGV 120
Query: 156 VELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVE 215
VELVSDFVVCEEGK LSPESARILRLLGIKMATF+LHLICRWS EDFELYREG DESDV+
Sbjct: 121 VELVSDFVVCEEGKHLSPESARILRLLGIKMATFRLHLICRWSPEDFELYREGQDESDVD 180
Query: 216 SA 217
SA
Sbjct: 181 SA 182
>gi|326514288|dbj|BAJ96131.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326530318|dbj|BAJ97585.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 234
Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 137/234 (58%), Positives = 176/234 (75%), Gaps = 17/234 (7%)
Query: 1 MPKSKRDRPVTLSKTKKK-GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKR+R VTLSKTKKK G E K +V I++A+E + S YVF++ NMRN K K R+Q
Sbjct: 1 MPKSKRNRSVTLSKTKKKPGLERKGKVVTEIKDAIERHSSAYVFTYNNMRNQKLKALRDQ 60
Query: 60 IKPSRLLWV----------GRYPMRYSQA--YKVSKFLCGNTGLFLTNMPKEEVESLFNK 107
+K S +++ GR P ++ +K+SKFL G +GL TN+P+++VE LF +
Sbjct: 61 LKSSSRIFLAGKKVMQIALGRSPADEAKTGLHKLSKFLQGASGLLFTNLPRDDVERLFRE 120
Query: 108 YEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEE 167
+E DFARTGS AT+ VEL EGPLE+F+HEMEPFLRKQG+PVRLNKGVVELV+D VVCEE
Sbjct: 121 FEANDFARTGSIATQTVELKEGPLEKFSHEMEPFLRKQGLPVRLNKGVVELVADHVVCEE 180
Query: 168 GKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGL----DESDVESA 217
GKPLSPE+A LR+LG KMATF+L+L+CRWS++DFE+Y+EGL E D ES+
Sbjct: 181 GKPLSPEAAHTLRVLGTKMATFRLYLVCRWSSDDFEVYKEGLAHLGGEEDDESS 234
>gi|302755168|ref|XP_002961008.1| hypothetical protein SELMODRAFT_164004 [Selaginella moellendorffii]
gi|300171947|gb|EFJ38547.1| hypothetical protein SELMODRAFT_164004 [Selaginella moellendorffii]
Length = 227
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 130/218 (59%), Positives = 165/218 (75%), Gaps = 12/218 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR++ VTLSKTKKKG+EHKE IV ++R A E ++ +YVFSFENMRN KFK R+++
Sbjct: 1 MPKSKRNKLVTLSKTKKKGREHKESIVTAVRKASEEFRELYVFSFENMRNGKFKALRDEL 60
Query: 61 KPSRLLW----------VGRYPMRYSQ--AYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K S + +G+ P + +K S+FLCGNTG+ TN+P EEV +F +
Sbjct: 61 KSSTRFFLGSNKVLQIAIGKGPSDEVKEGIHKASEFLCGNTGMLFTNLPNEEVARIFTDF 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
E+ DFARTGSTATE VEL EGPLEQFTHEMEPFLRKQGMPVRLN+GVVELV D+ VC EG
Sbjct: 121 EELDFARTGSTATETVELNEGPLEQFTHEMEPFLRKQGMPVRLNRGVVELVGDYTVCREG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYR 206
+ +SPE++RILRLLG+KMA F++ L+CRWS F++ +
Sbjct: 181 EAISPEASRILRLLGVKMAPFRMSLLCRWSPNGFKVLK 218
>gi|449531629|ref|XP_004172788.1| PREDICTED: mRNA turnover protein 4 homolog, partial [Cucumis
sativus]
Length = 197
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 137/197 (69%), Positives = 156/197 (79%), Gaps = 12/197 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRDRPVTLSKTKKKG++HK+ +V IR AVENY S++VF+ ENMRNLKFKE REQ+
Sbjct: 1 MPKSKRDRPVTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQL 60
Query: 61 KP-SRLLWVGRYPMRYSQA-----------YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K SRL + M+ S +KVSK L GNTGL TN+PKEEVE LFN+Y
Sbjct: 61 KSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
EDYD+ARTGS A+EKVEL EGPLEQF+HEMEP LRK G+PVRLNKGVVELVSDFVVCEEG
Sbjct: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
Query: 169 KPLSPESARILRLLGIK 185
K LSPESA ILR LG++
Sbjct: 181 KSLSPESAGILRALGLR 197
>gi|108862073|gb|ABA95602.2| ribosomal protein L10 containing protein [Oryza sativa Japonica
Group]
Length = 383
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 132/234 (56%), Positives = 174/234 (74%), Gaps = 27/234 (11%)
Query: 10 VTLSKTKKK-GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWV 68
VTLSKTKKK G E K +V I++AVE+Y + YVF+++NMRN K K+ REQ+K S +++
Sbjct: 146 VTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSRIFL 205
Query: 69 ----------GRYPMRYSQA--YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART 116
GR P ++ +K+SKFL G+TGLF TN+P+++VE LF ++E++DFART
Sbjct: 206 AGKKVMQIALGRSPADEAKTGLHKLSKFLQGDTGLFFTNLPRDDVERLFREFEEHDFART 265
Query: 117 GSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESA 176
GS ATE VEL EGPLEQFTHEMEPFLRKQGMPVRLNKG VELV+D +VCEEGKP+SPE+A
Sbjct: 266 GSIATETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGAVELVADHIVCEEGKPISPEAA 325
Query: 177 RIL--------------RLLGIKMATFKLHLICRWSAEDFELYREGLDESDVES 216
+ L RLLG++MATF+L+L+CRWS++DFE+Y+EGL + E+
Sbjct: 326 QTLIGIFDDVNIVTKPMRLLGMQMATFRLYLVCRWSSDDFEVYKEGLAQLRAEA 379
>gi|222616471|gb|EEE52603.1| hypothetical protein OsJ_34924 [Oryza sativa Japonica Group]
Length = 319
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/234 (56%), Positives = 173/234 (73%), Gaps = 27/234 (11%)
Query: 10 VTLSKTKKK-GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPS-RLLW 67
VTLSKTKKK G E K +V I++AVE+Y + YVF+++NMRN K K+ REQ+K S R+
Sbjct: 82 VTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSRIFL 141
Query: 68 VGRYPMRYSQA-----------YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART 116
G+ M+ + +K+SKFL G+TGLF TN+P+++VE LF ++E++DFART
Sbjct: 142 AGKKVMQIALGRSPADEAKTGLHKLSKFLQGDTGLFFTNLPRDDVERLFREFEEHDFART 201
Query: 117 GSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESA 176
GS ATE VEL EGPLEQFTHEMEPFLRKQGMPVRLNKG VELV+D +VCEEGKP+SPE+A
Sbjct: 202 GSIATETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGAVELVADHIVCEEGKPISPEAA 261
Query: 177 RIL--------------RLLGIKMATFKLHLICRWSAEDFELYREGLDESDVES 216
+ L RLLG++MATF+L+L+CRWS++DFE+Y+EGL + E+
Sbjct: 262 QTLIGIFDDVNIVTKPMRLLGMQMATFRLYLVCRWSSDDFEVYKEGLAQLRAEA 315
>gi|388492048|gb|AFK34090.1| unknown [Lotus japonicus]
Length = 233
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 139/224 (62%), Positives = 160/224 (71%), Gaps = 29/224 (12%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR++ VTLSKTKKKG+EHKEVIVN+IR+A E Y S+YVFSFENMRNLKFKEFR+Q+
Sbjct: 1 MPKSKRNKQVTLSKTKKKGREHKEVIVNAIRDAAEKYSSLYVFSFENMRNLKFKEFRDQL 60
Query: 61 KPSRLLWVGRYPMRY------------SQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K S ++G + + YKVSK L G++G+F TN+ KEEVE LFN Y
Sbjct: 61 KSSSRFFLGSNKVMQVALGRSASDEIKPRLYKVSKLLRGDSGMFFTNLSKEEVERLFNGY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
E+YDFARTG ATEKV+L EGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG
Sbjct: 121 EEYDFARTGGIATEKVDLQEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLIC---RWSAEDFELYREGL 209
KPLSPE + +C RW DF + GL
Sbjct: 181 KPLSPEHL--------------AYCVCWESRWLHFDFTWFAGGL 210
>gi|302767162|ref|XP_002967001.1| hypothetical protein SELMODRAFT_86951 [Selaginella moellendorffii]
gi|300164992|gb|EFJ31600.1| hypothetical protein SELMODRAFT_86951 [Selaginella moellendorffii]
Length = 219
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/209 (58%), Positives = 157/209 (75%), Gaps = 12/209 (5%)
Query: 10 VTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLW-- 67
VTLSKTKKKG+EHKE IV ++R A E ++ +YVFSFENMRN KFK R+++K S +
Sbjct: 2 VTLSKTKKKGREHKESIVTAVRKASEEFRELYVFSFENMRNGKFKALRDELKSSTRFFLG 61
Query: 68 --------VGRYPMRYSQ--AYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTG 117
+G+ P + +K S+FLCGNTG+ TN+P EEV +F +E+ DFARTG
Sbjct: 62 SNKVLQIAIGKGPSDEVKEGIHKASEFLCGNTGMLFTNLPNEEVARIFTDFEELDFARTG 121
Query: 118 STATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESAR 177
STATE VEL EGPLEQFTHEMEPFLRKQGMPVRLN+GVVELV D+ VC EG+ +SPE++R
Sbjct: 122 STATETVELNEGPLEQFTHEMEPFLRKQGMPVRLNRGVVELVGDYTVCREGEAISPEASR 181
Query: 178 ILRLLGIKMATFKLHLICRWSAEDFELYR 206
ILRLLG+KMA F++ ++CRWS F++ +
Sbjct: 182 ILRLLGVKMAPFRMSVLCRWSPNGFKVLK 210
>gi|351722953|ref|NP_001235726.1| uncharacterized protein LOC100305462 [Glycine max]
gi|255625579|gb|ACU13134.1| unknown [Glycine max]
Length = 182
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 120/182 (65%), Positives = 145/182 (79%), Gaps = 12/182 (6%)
Query: 48 MRNLKFKEFREQIKPSRLLWVG-----RYPMRYSQA-------YKVSKFLCGNTGLFLTN 95
MRN KFKEFR+Q+K S ++G + + S + +KVSK L G++G+ TN
Sbjct: 1 MRNQKFKEFRDQLKSSSRFFLGSNKVMQVALGRSASDEIRPGLHKVSKLLRGDSGMVFTN 60
Query: 96 MPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGV 155
+ KEEVE LF ++E+YDFARTGS ATEKV+L EGPLEQFTHEMEPFLRKQGMPVRLNKGV
Sbjct: 61 LSKEEVERLFKEFEEYDFARTGSNATEKVDLKEGPLEQFTHEMEPFLRKQGMPVRLNKGV 120
Query: 156 VELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVE 215
VELVSDFVVCEE KPLSPE++RILRL+GIKMATF+L LICRWS ++FELY +G DESD+E
Sbjct: 121 VELVSDFVVCEERKPLSPEASRILRLMGIKMATFRLSLICRWSPDEFELYIDGPDESDIE 180
Query: 216 SA 217
+
Sbjct: 181 CS 182
>gi|194697260|gb|ACF82714.1| unknown [Zea mays]
Length = 183
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 140/174 (80%), Gaps = 12/174 (6%)
Query: 48 MRNLKFKEFREQIKPS-RLLWVGRYPMRYSQA-----------YKVSKFLCGNTGLFLTN 95
MRN K K+ REQ+K S R+ G+ M+ + +K+SKFL GN+GL TN
Sbjct: 1 MRNQKLKDLREQLKSSSRIFLAGKKVMQIALGRSAADEAKTGLHKLSKFLQGNSGLLFTN 60
Query: 96 MPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGV 155
+P+++VE +F ++E++DFARTGSTA + VEL EGPLEQFTHEMEPFLRKQG+PVRLNKGV
Sbjct: 61 LPRDDVERMFREFEEHDFARTGSTAADTVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGV 120
Query: 156 VELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGL 209
VELV+D VVCEEGKPLSPE+A+ILRLLGI+MATF+L+L+CRWS+++FE Y+EGL
Sbjct: 121 VELVADHVVCEEGKPLSPEAAQILRLLGIQMATFRLYLVCRWSSDEFEAYKEGL 174
>gi|108863910|gb|ABG22329.1| ribosomal protein L10 containing protein, expressed [Oryza sativa
Japonica Group]
Length = 185
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/181 (59%), Positives = 142/181 (78%), Gaps = 12/181 (6%)
Query: 48 MRNLKFKEFREQIKPS-RLLWVGRYPMRYSQA-----------YKVSKFLCGNTGLFLTN 95
MRN K K+ REQ+K S R+ G+ M+ + +K+SKFL G+TGLF TN
Sbjct: 1 MRNQKLKDLREQLKSSSRIFLAGKKVMQIALGRSSADEAKTGLHKLSKFLQGDTGLFFTN 60
Query: 96 MPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGV 155
+P+++VE LF ++E++DFARTGS TE VEL EGPLEQFTHEMEPFLRKQG+PVRLNKG
Sbjct: 61 LPRDDVERLFREFEEHDFARTGSIVTETVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGA 120
Query: 156 VELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVE 215
VELV+D +VCEEGKP+SPE+A+ LRLLG++MATF+L+L+CRWS++DFE+Y+EGL + E
Sbjct: 121 VELVADHIVCEEGKPISPEAAQTLRLLGMQMATFRLYLVCRWSSDDFEVYKEGLAQLRAE 180
Query: 216 S 216
+
Sbjct: 181 A 181
>gi|168038066|ref|XP_001771523.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677250|gb|EDQ63723.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 232
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 167/217 (76%), Gaps = 12/217 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR++ VTLSKTKKK KE KE +V S+R+ ++ Y S+Y+FSFENMRN+KFKEF+E++
Sbjct: 1 MPKSKRNKLVTLSKTKKKDKEQKESLVKSVRDCLDQYTSLYIFSFENMRNIKFKEFKEKL 60
Query: 61 KPSRLLWVG-----RYPMRYSQA-------YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K S ++G + + S+A ++ S+ + G GLF TN+PK EV F ++
Sbjct: 61 KSSSRFFLGGNKVLQIALGKSEAEEQKEGLHQASELIHGFCGLFFTNLPKSEVIRGFQEF 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
E+ DFARTGS ATE VEL EGPLEQF+H+MEPFLRKQGMPVRLN+GVVELV+D+ VC EG
Sbjct: 121 EELDFARTGSVATETVELQEGPLEQFSHDMEPFLRKQGMPVRLNRGVVELVADYTVCTEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAEDFELY 205
+ +SP+++RILRLLG++MA FK+HL CRW+ +FE++
Sbjct: 181 ENISPQASRILRLLGVQMAAFKMHLRCRWTPNEFEVF 217
>gi|168066014|ref|XP_001784939.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663486|gb|EDQ50247.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 232
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 166/217 (76%), Gaps = 12/217 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR++ VTLSKTKKKGKE KE +V S+R+ ++ Y S+Y+FSF NMRN KFKEF+E++
Sbjct: 1 MPKSKRNKLVTLSKTKKKGKEQKESLVKSVRDCLDEYASLYIFSFVNMRNTKFKEFKEKL 60
Query: 61 KPSRLLWVG-----RYPMRYSQA-------YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K S ++G + + + A ++ S+ + G GLF TN+PK EV F ++
Sbjct: 61 KASSRFFLGGNKVLQIALGKTAAEEHKEGLHQASEQIHGFCGLFFTNLPKFEVLREFREF 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
E+ DFARTGS ATE V+L EGPL+QFTH+MEPFLRKQGMPVRLN+GV+ELV+D+ VC EG
Sbjct: 121 EELDFARTGSIATETVDLKEGPLDQFTHDMEPFLRKQGMPVRLNRGVIELVADYNVCTEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAEDFELY 205
+ +SPE++RILRLLG++MA FK+HL CRW+ ++FE++
Sbjct: 181 QNISPEASRILRLLGVQMAAFKMHLRCRWTPDEFEVF 217
>gi|332374122|gb|AEE62202.1| unknown [Dendroctonus ponderosae]
Length = 230
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 107/215 (49%), Positives = 144/215 (66%), Gaps = 12/215 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L+KT KKG K+ IV+ +RN VE +++IY+F+F NMRN K KE REQ
Sbjct: 1 MPKSKRDKKISLTKTSKKGLSLKQKIVDDVRNCVEKFQNIYIFTFRNMRNEKMKEVREQW 60
Query: 61 KPSRLLW----VGRYPMRYSQA-------YKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
KPSR + V + S+A +++SK L G GL T+ K+EV F+ Y
Sbjct: 61 KPSRFFFGKNKVIAIGLGRSEAEEVEDGLHELSKSLKGQCGLLFTDCTKKEVTEWFDDYA 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
DFAR+G ATE + L EGPL+QF+H +EP+LR+ GMP +L++GVV L+ DF VC+EG
Sbjct: 121 VEDFARSGCKATETIALSEGPLKQFSHAIEPYLRQLGMPTKLDRGVVTLIKDFEVCKEGS 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWS-AEDFE 203
L+PE A+IL LL K+ATFKL L RW+ E FE
Sbjct: 181 ILTPEQAKILELLENKLATFKLILTGRWTKGEGFE 215
>gi|414868179|tpg|DAA46736.1| TPA: hypothetical protein ZEAMMB73_070633 [Zea mays]
Length = 157
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/146 (64%), Positives = 120/146 (82%), Gaps = 2/146 (1%)
Query: 66 LWVGRYPMRYSQA--YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEK 123
+ +GR P ++ +K+SKFL GN+GLF TN+P+++VE +F ++E++DFARTG TA +
Sbjct: 3 IGLGRPPADEAKTGLHKLSKFLQGNSGLFFTNLPRDDVERMFREFEEHDFARTGCTAVDT 62
Query: 124 VELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLG 183
VEL EGPLEQFTHEMEPFLRKQG+PVRLNKGVVELV+D VVCEEGKPLSP RL G
Sbjct: 63 VELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVVELVADHVVCEEGKPLSPSLRENRRLHG 122
Query: 184 IKMATFKLHLICRWSAEDFELYREGL 209
I+MATF L+L+CRWS+++FE Y+EGL
Sbjct: 123 IQMATFHLYLVCRWSSDEFEAYKEGL 148
>gi|440801769|gb|ELR22774.1| ribosomal protein L10, putative [Acanthamoeba castellanii str.
Neff]
Length = 251
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 135/208 (64%), Gaps = 11/208 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKS+R++ V L+KT+KK KE +V+++R +E Y S+YVF+FENMR+ +FK R +
Sbjct: 1 MPKSRRNKMVALTKTEKKVGRRKEELVDNLRKGLEEYASVYVFTFENMRSTQFKSVRARW 60
Query: 61 KPSRL---------LWVGRYPMRYS--QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
SR + +GR + +K+S+ L GN+GLFLTN P +EV + F Y
Sbjct: 61 SGSRFYLGKNKVMQIALGRSGQDEAAHDLHKLSRQLVGNSGLFLTNSPADEVATFFKDYA 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D+AR G +T+ VELP GPL F H MEP LRK GMP RLNKGV+EL F VC+EG
Sbjct: 121 ESDYARAGFVSTQTVELPAGPLPNFAHSMEPHLRKLGMPTRLNKGVIELDRHFTVCKEGA 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRW 197
L+PE A+IL+LL IKM+ F + L C W
Sbjct: 181 TLTPEQAKILKLLEIKMSQFSMALKCVW 208
>gi|61654606|gb|AAX48829.1| PO-like [Suberites domuncula]
Length = 228
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 137/211 (64%), Gaps = 11/211 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR+R +TLSKT+ KG E K ++ IR++V+ Y +++V+S +NMRN K K+ R +
Sbjct: 1 MPKSKRNRVLTLSKTRSKGHELKSGLLQEIRDSVDKYANLFVYSIDNMRNAKLKDLRTEW 60
Query: 61 KPSRLLWVGRYPMRY------SQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR + M+ S YK VS+ L G GLF TN P E+VE F+ +
Sbjct: 61 KDSRFFFGKNRVMQLALGRSESDEYKTGLHYVSEQLNGAVGLFFTNEPTEKVEKWFDNFS 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D+AR+G +TE++ EGPL QFTH MEP LRK G+P L KG V L D+ VC EG
Sbjct: 121 ENDYARSGFISTEEIVCSEGPLTQFTHNMEPQLRKLGLPTALKKGEVTLREDYTVCTEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAE 200
LSPE ARIL+LL IKMA+FK++LIC WS +
Sbjct: 181 VLSPEQARILKLLDIKMASFKVNLICVWSND 211
>gi|326932510|ref|XP_003212359.1| PREDICTED: mRNA turnover protein 4 homolog [Meleagris gallopavo]
Length = 237
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 139/216 (64%), Gaps = 13/216 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRDR V+L++T +KG E K+ ++ +R V+ YK+I++FS NMRN K K+ R
Sbjct: 1 MPKSKRDRKVSLTRTPRKGLEAKQALITELRRCVDTYKNIFIFSVANMRNNKLKDVRNAW 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR+ + +GR P +KVSK L G GL TN KEEV+ F+ ++
Sbjct: 61 KHSRIFFGKNKVMMVALGREPSSEYRENLHKVSKHLRGEVGLLFTNRTKEEVDEWFSSFK 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ DFAR G+ AT V L GPLEQF H MEP LR+ G+P L KGVV L+SD+ VC+EG
Sbjct: 121 EVDFARAGNKATYTVSLDTGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAE--DFE 203
L+PE AR+L+L G +MA FK+ + C W++E DF+
Sbjct: 181 ILTPEQARVLKLFGYEMAEFKVTIKCLWNSETGDFQ 216
>gi|209731538|gb|ACI66638.1| mRNA turnover protein 4 homolog [Salmo salar]
gi|209733360|gb|ACI67549.1| mRNA turnover protein 4 homolog [Salmo salar]
gi|303667928|gb|ADM16286.1| mRNA turnover protein 4 homolog [Salmo salar]
Length = 238
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 136/216 (62%), Gaps = 13/216 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L+KT KKG E K+ ++ +R VE YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKISLTKTAKKGLETKQNLIEELRKCVEMYKHLFIFSVANMRNNKLKDIRTAW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR + M + +KVS+FL G G+ TN KEEV+ FN+++
Sbjct: 61 KHSRFFFGKNKVMMIAIGKGSTSEYKDNLHKVSRFLRGEVGVLFTNKTKEEVQEYFNQFK 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ DFAR G+ A + L EGPLEQF H MEP LR+ G+P L KGVV L+ D VC+EG
Sbjct: 121 EMDFARAGNKAGMAITLDEGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLKDHGVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAE--DFE 203
L+PE ARIL+L GI+MA F++ + C W++E DFE
Sbjct: 181 TLTPEQARILKLFGIEMAEFRVRIQCMWNSETSDFE 216
>gi|62955283|ref|NP_001017657.1| mRNA turnover protein 4 homolog [Danio rerio]
gi|62204420|gb|AAH92913.1| Zgc:110388 [Danio rerio]
Length = 242
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 145/230 (63%), Gaps = 13/230 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L+KT KKG E K+ ++ +R + Y+ ++VFS ENMRN K K+ R
Sbjct: 1 MPKSKRDKKISLTKTTKKGLEAKQNLIEELRKCADIYRYVFVFSVENMRNNKLKDIRTAW 60
Query: 61 KPSR---------LLWVGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
+ SR ++ +G+ P +K+S+FL G G+ TN K+EV+ F ++
Sbjct: 61 RHSRFFFGKNKVMMIALGKGPTDEYKDNLHKLSRFLRGEVGVLFTNKTKDEVQEYFGNFK 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D+AR G+TA+ V L EGPL+QF H MEP LR+ G+P L KG V L+ DF VC+EG
Sbjct: 121 EVDYARAGNTASMAVTLDEGPLDQFPHSMEPQLRQLGLPTALKKGAVTLIKDFEVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAE--DFELYREGLDESDVESA 217
L+PE ARIL+L G +MA FKL + C W++E +FE +G D+ + + A
Sbjct: 181 TLTPEQARILKLFGFEMAEFKLSIKCMWNSESGEFEKLTDGDDDDETKEA 230
>gi|209735258|gb|ACI68498.1| mRNA turnover protein 4 homolog [Salmo salar]
Length = 239
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 139/216 (64%), Gaps = 13/216 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLETKQNLIEELRKCVDIYKHLFIFSVANMRNNKLKDIRTAW 60
Query: 61 KPSR---------LLWVGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR ++ +G+ P YKVS+FL G G+ TN KEEV+ F++++
Sbjct: 61 KHSRFFFGKNKVMMIAIGKGPTSEYKDNLYKVSRFLRGEVGVLFTNKTKEEVQEYFSQFK 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ +FAR G+ A + L EGPLEQF H MEP LR+ G+P L KGVV L+ D VC+EG
Sbjct: 121 EMNFARAGNKAGMAIALDEGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLKDHDVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAE--DFE 203
L+PE ARIL+L GI+MA F++ + C W++E DFE
Sbjct: 181 TLTPEQARILKLFGIEMAEFRVQIKCMWNSETSDFE 216
>gi|209733118|gb|ACI67428.1| mRNA turnover protein 4 homolog [Salmo salar]
gi|223646444|gb|ACN09980.1| mRNA turnover protein 4 homolog [Salmo salar]
gi|223672291|gb|ACN12327.1| mRNA turnover protein 4 homolog [Salmo salar]
Length = 239
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 139/216 (64%), Gaps = 13/216 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLETKQNLIEELRKCVDIYKHLFIFSVANMRNNKLKDIRTAW 60
Query: 61 KPSR---------LLWVGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR ++ +G+ P YKVS+FL G G+ TN KEEV+ F++++
Sbjct: 61 KHSRFFFGKNKVMMIAIGKGPTSEYKDNLYKVSRFLRGEVGVLFTNKTKEEVQEYFSQFK 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ +FAR G+ A + L EGPLEQF H MEP LR+ G+P L KGVV L+ D VC+EG
Sbjct: 121 EMNFARAGNKAGMAITLDEGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLKDHDVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAE--DFE 203
L+PE ARIL+L GI+MA F++ + C W++E DFE
Sbjct: 181 TLTPEQARILKLFGIEMAEFRVQIKCMWNSETSDFE 216
>gi|209733238|gb|ACI67488.1| mRNA turnover protein 4 homolog [Salmo salar]
Length = 240
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 139/216 (64%), Gaps = 13/216 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLETKQNLIEELRKCVDIYKHLFIFSVANMRNNKLKDIRTAW 60
Query: 61 KPSR---------LLWVGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR ++ +G+ P YKVS+FL G G+ TN KEEV+ F++++
Sbjct: 61 KHSRFFFGKNKAMMIAIGKGPTSEYKDNLYKVSRFLRGEVGVLFTNKTKEEVQEYFSQFK 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ +FAR G+ A + L EGPLEQF H MEP LR+ G+P L KGVV L+ D VC+EG
Sbjct: 121 EMNFARAGNKAGMAITLDEGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLKDHDVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAE--DFE 203
L+PE ARIL+L GI+MA F++ + C W++E DFE
Sbjct: 181 TLTPEQARILKLFGIEMAEFRVQIKCMWNSETSDFE 216
>gi|225716882|gb|ACO14287.1| mRNA turnover protein 4 homolog [Esox lucius]
Length = 239
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 140/216 (64%), Gaps = 13/216 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS ENMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTTKKGLETKQNLIEELRKCVDIYKHLFIFSVENMRNNKLKDIRTAW 60
Query: 61 KPSR---------LLWVGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR ++ +G+ P +KV++FL G G+ TN KEEV+ F++++
Sbjct: 61 KHSRFFFGKNKVMMIAIGKGPTSEYKDNLHKVTRFLKGEVGVLFTNKTKEEVQEYFSQFK 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ DFAR G+ A V L EGPLEQF H MEP LR+ G+P L KGVV L+ D VC+EG
Sbjct: 121 EMDFARAGNKAEMAVTLDEGPLEQFPHSMEPQLRQLGLPTALRKGVVTLLKDHDVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAE--DFE 203
L+PE ARIL+L GI++A F++ + C W++E DFE
Sbjct: 181 TLTPEQARILKLFGIELAEFRVQVKCMWNSETCDFE 216
>gi|209735134|gb|ACI68436.1| mRNA turnover protein 4 homolog [Salmo salar]
Length = 238
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 135/216 (62%), Gaps = 13/216 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L+KT KKG E K+ ++ +R VE YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKISLTKTAKKGLETKQNLIEELRKCVEMYKHLFIFSVANMRNNKLKDIRTAW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR + M + +KVS+FL G G+ TN KEEV+ FN+++
Sbjct: 61 KHSRFFFGKNKVMMIAIGKGSTSEYKDNLHKVSRFLRGEVGVLFTNKTKEEVQEYFNQFK 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ DFAR G+ A + L EGPL QF H MEP LR+ G+P L KGVV L+ D VC+EG
Sbjct: 121 EMDFARAGNKAGMAITLDEGPLGQFPHSMEPQLRQLGLPTALKKGVVTLLKDHGVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAE--DFE 203
L+PE ARIL+L GI+MA F++ + C W++E DFE
Sbjct: 181 TLTPEQARILKLFGIEMAEFRVRIQCMWNSETSDFE 216
>gi|209731550|gb|ACI66644.1| mRNA turnover protein 4 homolog [Salmo salar]
Length = 240
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 137/215 (63%), Gaps = 11/215 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLETKQNLIEELRKCVDIYKHLFIFSVANMRNNKLKDIRTAW 60
Query: 61 KPSR---------LLWVGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR ++ +G+ P YKVS+FL G G+ TN KEEV+ F++++
Sbjct: 61 KHSRFFFGKNKVMMIAIGKGPTSEYKDNLYKVSRFLRGEVGVLFTNKTKEEVQEYFSQFK 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ +FAR G+ A + L EGPLEQF H MEP LR+ G+P L KG V L+ D VC+EG
Sbjct: 121 EMNFARAGNKAGMAITLDEGPLEQFPHSMEPQLRQLGLPTALKKGAVTLLKDHDVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
L+PE ARIL+L GI+MA F++ + C W++E +L
Sbjct: 181 TLTPEQARILKLFGIEMAEFRVQIKCMWNSETSDL 215
>gi|148236567|ref|NP_001079849.1| mRNA turnover 4 homolog [Xenopus laevis]
gi|33585639|gb|AAH56008.1| MGC68920 protein [Xenopus laevis]
Length = 240
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 137/219 (62%), Gaps = 11/219 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK I+V S ENMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLEVKQNLIEELRKCVDTYKYIFVLSVENMRNNKLKDVRNAW 60
Query: 61 KPSRLLWVGRYPMRYSQA-----------YKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SRL + M + +K+SK L G GL TN ++EVE F++Y+
Sbjct: 61 KHSRLFFGKNKVMMVAMGKGVSDEYKDNLHKLSKCLKGEVGLLFTNRTEKEVEEWFDQYK 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ DFAR G+ AT V L GPL+QFTH MEP LR+ G+P L KGV+ L+SD+ +C+EG
Sbjct: 121 ETDFARAGNKATYSVVLDAGPLDQFTHSMEPQLRQLGLPTALKKGVITLLSDYDLCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREG 208
L+PE ARIL+L G +MA FK+ + W+AE E + G
Sbjct: 181 VLTPEQARILKLFGFQMAEFKVSIKSIWTAETGEFQKLG 219
>gi|348534184|ref|XP_003454583.1| PREDICTED: mRNA turnover protein 4 homolog [Oreochromis niloticus]
Length = 239
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 135/215 (62%), Gaps = 11/215 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L+KT KKG E K+ ++ +R V+ Y+++++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKISLTKTAKKGLESKQKLIQELRECVDTYRNLFIFSVANMRNNKLKDIRTAW 60
Query: 61 KPSRLLWVGRYPM------RYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR + M R + YK V K L G G+ TN KEEV+ F+ ++
Sbjct: 61 KHSRFFFGKNKVMIVALGKRDTDEYKDNLHKVGKHLRGEVGVLFTNKTKEEVQEYFSHFK 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D+AR G+ A V L EGPLEQFTH MEP LR+ G+P L KGVV L+ D+ VC+EG
Sbjct: 121 EVDYARAGNQAQMDVTLDEGPLEQFTHSMEPQLRQLGLPTALKKGVVTLLKDYEVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
L+PE ARIL+L GI+MA FK+ + C W++E E
Sbjct: 181 TLTPEQARILKLFGIEMAEFKVQIKCMWNSETGEF 215
>gi|209730936|gb|ACI66337.1| mRNA turnover protein 4 homolog [Salmo salar]
Length = 240
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 138/216 (63%), Gaps = 13/216 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLETKQNLIEELRKCVDIYKHLFIFSVANMRNNKLKDIRTAW 60
Query: 61 KPSR---------LLWVGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR ++ +G+ P YKVS+FL G G+ TN KEEV+ F++++
Sbjct: 61 KHSRFFFGKNKVMMIAIGKGPTSEYKDNLYKVSRFLRGEVGVLFTNKTKEEVQEYFSQFK 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ +FAR G+ A + L EGPLEQF H MEP LR+ G+P L KGVV L+ D VC+ G
Sbjct: 121 EMNFARAGNKAGMAITLDEGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLKDHDVCKGGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAE--DFE 203
L+PE ARIL+L GI+MA F++ + C W++E DFE
Sbjct: 181 TLTPEQARILKLFGIEMAEFRVQIKCMWNSETSDFE 216
>gi|52346144|ref|NP_001005116.1| mRNA turnover 4 homolog [Xenopus (Silurana) tropicalis]
gi|50369173|gb|AAH77055.1| MGC89995 protein [Xenopus (Silurana) tropicalis]
gi|89267864|emb|CAJ82998.1| novel protein [Xenopus (Silurana) tropicalis]
Length = 240
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 136/219 (62%), Gaps = 11/219 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK IYV S ENMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLEVKQNLIEELRKCVDTYKYIYVLSVENMRNNKLKDVRNAW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SRL + M + +K+SK L G GL TN ++EV+ F++++
Sbjct: 61 KHSRLFFGKNKVMMVALGKGVSDEYKDNLHKLSKCLKGEVGLLFTNRTEKEVKEWFDQFK 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
D DFAR G+ AT V L GPLEQFTH MEP LR+ G+P L KGV+ L+SD+ VC+EG
Sbjct: 121 DMDFARAGNKATYAVVLDAGPLEQFTHSMEPQLRQLGLPTALKKGVITLLSDYEVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREG 208
L+PE ARIL+L +MA FK+ + W+AE E + G
Sbjct: 181 VLTPEQARILKLFSFQMAEFKVSIKSIWTAETGEFQKFG 219
>gi|432857467|ref|XP_004068695.1| PREDICTED: mRNA turnover protein 4 homolog [Oryzias latipes]
Length = 239
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/215 (46%), Positives = 137/215 (63%), Gaps = 11/215 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L+KT KKG E K+ ++ +R V+ Y+++++FS ENMRN K K+ R
Sbjct: 1 MPKSKRDKKISLTKTTKKGLESKQKLIEELRKCVDTYRNLFIFSVENMRNNKLKDIRTAW 60
Query: 61 KPSRLLW---------VGR-YPMRY-SQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR + +G+ P Y +KVSKFL G G+ TN K+EV F+ ++
Sbjct: 61 KHSRFFFGKNKVMIVALGKGSPDEYKDNLHKVSKFLRGEVGVLFTNKTKDEVYEYFSHFK 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ DFAR G+ A V L EGPLEQF H MEP LR+ G+P L KGVV L+ D+ VC+EG
Sbjct: 121 EMDFARAGNQAQMDVTLDEGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLKDYEVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
L+PE ARIL+L I+MA FK+ + C W++E E
Sbjct: 181 ILTPEQARILKLFAIEMAEFKVKIKCMWNSETTEF 215
>gi|410966282|ref|XP_003989662.1| PREDICTED: mRNA turnover protein 4 homolog [Felis catus]
Length = 238
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 140/230 (60%), Gaps = 13/230 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR+ + +GR P ++VSK L G GL TN KEEV F KY
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPADEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ DFAR G+ AT V L GPLEQF H MEP LR+ G+P L +GVV L+SD+ VC+EG
Sbjct: 121 EMDFARAGNKATFTVTLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAE--DFELYREGLDESDVESA 217
L+PE AR+L+L G +MA FK+ + W A+ F+ E L ES ESA
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDAQSGSFQPIGEDLPESAPESA 230
>gi|392876584|gb|AFM87124.1| mRNA turnover 4-like protein [Callorhinchus milii]
gi|392877480|gb|AFM87572.1| mRNA turnover 4-like protein [Callorhinchus milii]
gi|392880138|gb|AFM88901.1| mRNA turnover 4-like protein [Callorhinchus milii]
Length = 236
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 138/211 (65%), Gaps = 11/211 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+S+RD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS +NMRN K K+ R
Sbjct: 1 MPRSRRDKKVSLTKTAKKGLEVKQNLIEELRKCVDTYKHLFIFSIKNMRNNKLKDIRNAW 60
Query: 61 KPSRL---------LWVGRYPM-RYSQA-YKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR L +G+ P Y + +KVSK L G GL T+ KEEV F+++
Sbjct: 61 KHSRFFFGKNKVMALALGKGPADEYKEGLHKVSKELSGEVGLLFTSRTKEEVIEWFDQFS 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ DFAR+G+ AT V L GPL QFTH MEP LR+ G+P L KGVV L+SD+ VC+ G
Sbjct: 121 ENDFARSGNQATMAVTLDAGPLSQFTHSMEPQLRQLGLPTSLKKGVVVLLSDYDVCKAGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAE 200
L+PE AR+L+LLG++MA FK+ + C W++E
Sbjct: 181 ILTPEQARLLKLLGLEMAEFKVTISCMWNSE 211
>gi|403287520|ref|XP_003934992.1| PREDICTED: mRNA turnover protein 4 homolog [Saimiri boliviensis
boliviensis]
Length = 239
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 107/233 (45%), Positives = 142/233 (60%), Gaps = 19/233 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KE+V F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKKLRGEVGLLFTNRTKEDVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
KY + D+AR G+ AT V L GPLEQF+H MEP LR+ G+P L +GVV L+SD+ VC+
Sbjct: 118 KYTEMDYARAGNRATFTVSLDSGPLEQFSHSMEPQLRQLGLPTTLKRGVVTLLSDYEVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAED--FELYREGLDESDVESA 217
EG L+PE AR+L+L G +MA FK+ + W +E F+ + L ES ESA
Sbjct: 178 EGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSESGRFQQMGDDLPESVSESA 230
>gi|296206879|ref|XP_002750411.1| PREDICTED: mRNA turnover protein 4 homolog [Callithrix jacchus]
Length = 239
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/233 (45%), Positives = 141/233 (60%), Gaps = 19/233 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
KY + D+AR G+ AT V L GPLEQF H MEP LR+ G+P L +GVV L+SD+ VC+
Sbjct: 118 KYTEMDYARAGNKATFTVSLDSGPLEQFPHSMEPQLRQLGLPTTLKRGVVTLLSDYEVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAED--FELYREGLDESDVESA 217
EG L+PE AR+L+L G +MA FK+ + W ++ F+ + L ES ESA
Sbjct: 178 EGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGDDLPESASESA 230
>gi|50759402|ref|XP_425751.1| PREDICTED: mRNA turnover protein 4 homolog [Gallus gallus]
Length = 242
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 137/216 (63%), Gaps = 13/216 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRDR V+L++T +KG E K+ ++ +R V+ YK I++FS NMRN K K+ R
Sbjct: 1 MPKSKRDRKVSLTRTPRKGLEAKQALIAELRRCVDTYKHIFIFSVANMRNNKLKDVRNAW 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR+ + +GR P ++VSK L G GL TN KEEV+ F+ ++
Sbjct: 61 KHSRIFFGKNKVMMVALGREPSSEYRENLHQVSKHLRGEVGLLFTNRTKEEVDEWFSSFK 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ DFAR G+ AT V L GPLEQF H MEP LR+ G+P L KGVV L+SD+ VC+EG
Sbjct: 121 EVDFARAGNKATYTVSLDTGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAE--DFE 203
L+PE AR+L+L G +MA FK+ + W++E DF+
Sbjct: 181 ILTPEQARVLKLFGYEMAEFKVTIKFLWNSETGDFQ 216
>gi|134085930|ref|NP_001076868.1| mRNA turnover protein 4 homolog [Bos taurus]
gi|182675532|sp|A4FV84.1|MRT4_BOVIN RecName: Full=mRNA turnover protein 4 homolog
gi|133778149|gb|AAI23853.1| MRTO4 protein [Bos taurus]
gi|296489977|tpg|DAA32090.1| TPA: mRNA turnover protein 4 homolog [Bos taurus]
gi|440892613|gb|ELR45727.1| mRNA turnover protein 4-like protein [Bos grunniens mutus]
Length = 239
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 136/224 (60%), Gaps = 17/224 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV+ F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVDEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
KY + D+AR G+ AT V L GPLEQF H MEP LR+ G+P L KGVV L+SD+ VC+
Sbjct: 118 KYTEMDYARAGNKATFTVNLDPGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
EG L+PE AR+L+L G +MA FK+ + W A+ + G D
Sbjct: 178 EGDVLTPEQARVLKLFGYEMAEFKVSIKYMWDAQSGRFQQMGDD 221
>gi|195122132|ref|XP_002005566.1| GI18999 [Drosophila mojavensis]
gi|193910634|gb|EDW09501.1| GI18999 [Drosophila mojavensis]
Length = 259
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 139/218 (63%), Gaps = 13/218 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKRD+ V+L+KT +KG K+ I++ IR VE Y +I+VF +NMRN K+ R++
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRIIDDIRFCVEKYPNIFVFQVQNMRNNLLKDLRQEW 60
Query: 61 KPS--------RLLWVGRYPMRYSQA----YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + R++ +G + + +K+SK L G GL T KEEV +KY
Sbjct: 61 KQNSRFIFGKNRIMQIGLGRTKAEEVEKGIHKLSKRLTGQVGLLFTEKSKEEVLKWADKY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
++AR+G TATE V LP GPLE+F H MEP LR G+P +L KG+V L SD+ VCE+G
Sbjct: 121 WAVEYARSGFTATETVTLPAGPLEEFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEKG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWS-AEDFELY 205
K L+PE ARIL+LLG MA F+L + C W+ A+ F+L+
Sbjct: 181 KVLTPEQARILKLLGKPMAKFRLTMKCSWTKADGFQLH 218
>gi|387913858|gb|AFK10538.1| mRNA turnover 4-like protein [Callorhinchus milii]
Length = 236
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 137/211 (64%), Gaps = 11/211 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+S+RD+ V+L+KT KKG E K+ + +R V+ YK +++FS +NMRN K K+ R
Sbjct: 1 MPRSRRDKKVSLTKTAKKGLEVKQNPIEELRKCVDTYKHLFIFSIKNMRNNKLKDIRNAW 60
Query: 61 KPSRL---------LWVGRYPM-RYSQA-YKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR L +G+ P Y + +KVSK L G GL T+ KEEV F+++
Sbjct: 61 KHSRFFFGKNKVMALALGKGPADEYKEGLHKVSKELSGEVGLLFTSRTKEEVIEWFDQFS 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ DFAR+G+ AT V L GPL QFTH MEP LR+ G+P L KGVV L+SD+ VC+ G
Sbjct: 121 ENDFARSGNQATMAVTLDAGPLSQFTHSMEPQLRQLGLPTSLKKGVVVLLSDYDVCKAGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAE 200
L+PE AR+L+LLG++MA FK+ + C W++E
Sbjct: 181 ILTPEQARLLKLLGLEMAEFKVTISCMWNSE 211
>gi|195430430|ref|XP_002063258.1| GK21826 [Drosophila willistoni]
gi|194159343|gb|EDW74244.1| GK21826 [Drosophila willistoni]
Length = 250
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/231 (44%), Positives = 145/231 (62%), Gaps = 14/231 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKRD+ V+L+KT +KG K+ I++ IR VE Y +I+VF +NMRN K+ R++
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRIIDDIRFCVEKYPNIFVFQVQNMRNNLLKDLRQEW 60
Query: 61 KPS--------RLLWVGRYPMRYSQA----YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + R++ +G + + +K+SK L G GL T K+EV Y
Sbjct: 61 KKNSRFIFGKNRIMQIGLGRTKAEETETDLHKLSKRLTGQVGLLFTEKTKKEVLEWAENY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
++AR+G AT+ V LP GPLE+FTH MEP LR G+P +L KGVV + SD+ VCEEG
Sbjct: 121 WAVEYARSGFVATKTVTLPAGPLEEFTHSMEPHLRSLGLPTKLEKGVVTIYSDYTVCEEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAED-FELYRE-GLDESDVESA 217
K L+PE ARIL+LLG MA F+L + C W+ +D FEL+ E +D++ +SA
Sbjct: 181 KVLTPEQARILKLLGDPMAKFRLTMKCSWTKKDGFELHVEDSVDDNQSDSA 231
>gi|348570854|ref|XP_003471211.1| PREDICTED: mRNA turnover protein 4 homolog [Cavia porcellus]
Length = 241
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/222 (45%), Positives = 136/222 (61%), Gaps = 11/222 (4%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR+ + +GR P ++VSK L G GL TN KEEV F KY
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPADEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ DFAR G+ AT V L GPLEQF H MEP LR+ G+P L +GVV L+SD+ VC+EG
Sbjct: 121 EMDFARAGNKATFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDE 211
L+PE AR+L+L G +MA FK+ + W ++ + + G D+
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRVQQMGDDD 222
>gi|351711810|gb|EHB14729.1| mRNA turnover protein 4-like protein [Heterocephalus glaber]
Length = 239
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 135/225 (60%), Gaps = 17/225 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVFLTKTTKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV F
Sbjct: 61 KHSRIFFGKNKVMMVALGRSP---SDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
KY + DFAR G+ AT V L GPLEQF H MEP LR+ G+P L +GVV L+SD+ VC+
Sbjct: 118 KYTEMDFARAGNKATFTVSLDSGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDE 211
EG L+PE AR+L+L G +MA FK+ + W A+ + G D+
Sbjct: 178 EGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDAQSGRFQQMGDDD 222
>gi|291399405|ref|XP_002716054.1| PREDICTED: mRNA turnover 4 homolog [Oryctolagus cuniculus]
Length = 239
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 139/233 (59%), Gaps = 17/233 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFLFSVANMRNNKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR+ + +GR P ++VSK L G GL T+ KEEV F KY
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPADEYKDNLHQVSKKLRGEVGLLFTDRTKEEVNEWFTKYA 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D+AR G+ AT V L GPLEQF H MEP LR+ G+P L +GVV L+SD+ VC+EG
Sbjct: 121 EMDYARAGNKATFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFELYR------EGLDESDVES 216
L+PE AR+L+L G +MA FK+ + W A+ + EG+ ES ES
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTITYMWDAQSGRFQQMGDDLPEGMSESATES 233
>gi|343962640|ref|NP_001230644.1| mRNA turnover 4 homolog [Sus scrofa]
Length = 241
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 133/221 (60%), Gaps = 11/221 (4%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKFLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR+ + +GR P ++VSK L G GL TN KEEV F KY
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPCEEYRDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYG 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D+AR G+ AT V L GPLEQF H MEP LR+ G+P L KGVV L+SD+ VC+EG
Sbjct: 121 EMDYARAGNKATFTVNLDPGPLEQFPHSMEPQLRQLGLPTTLKKGVVTLLSDYEVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
L+PE ARIL+L G +MA FK+ + W A+ G D
Sbjct: 181 VLTPEQARILKLFGYEMAEFKVTIRYMWDAQSGRFQEMGDD 221
>gi|149024422|gb|EDL80919.1| rCG31507, isoform CRA_b [Rattus norvegicus]
Length = 240
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 132/214 (61%), Gaps = 17/214 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
KY + DFAR G+ AT V L GPL+QF H MEP LR+ G+P L KGVV L+SD+ VC+
Sbjct: 118 KYTEMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
EG L+PE AR+L+L G +MA FK+ + W A+
Sbjct: 178 EGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDAQ 211
>gi|301759673|ref|XP_002915673.1| PREDICTED: mRNA turnover protein 4 homolog [Ailuropoda melanoleuca]
Length = 239
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 133/221 (60%), Gaps = 11/221 (4%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR+ + +GR P ++VSK L G GL TN KEEV F KY
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPADEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ DFAR G+ AT V L GPLEQF H MEP LR+ G+P L +GVV L+SD VC+EG
Sbjct: 121 EMDFARAGNKATFTVTLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDHEVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
L+PE AR+L+L G +MA FK+ + W A+ + G D
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDAQSGRFQQMGDD 221
>gi|51316521|sp|Q9D0I8.1|MRT4_MOUSE RecName: Full=mRNA turnover protein 4 homolog
gi|12847477|dbj|BAB27585.1| unnamed protein product [Mus musculus]
gi|187950969|gb|AAI38222.1| Mrto4 protein [Mus musculus]
gi|219519534|gb|AAI45206.1| Mrto4 protein [Mus musculus]
Length = 239
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 103/214 (48%), Positives = 132/214 (61%), Gaps = 17/214 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
KY + DFAR G+ AT V L GPL+QF H MEP LR+ G+P L KGVV L+SD+ VC+
Sbjct: 118 KYTEMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
EG L+PE ARIL+L G +MA FK+ + W A+
Sbjct: 178 EGDVLTPEQARILKLFGYEMAEFKVIIKYMWDAQ 211
>gi|410919855|ref|XP_003973399.1| PREDICTED: mRNA turnover protein 4 homolog [Takifugu rubripes]
Length = 238
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 133/215 (61%), Gaps = 11/215 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L+KT KKG E K+ ++ +R V+ Y+++++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKISLTKTVKKGLEVKQKLITELRQCVDTYRNLFIFSVANMRNSKIKDIRTAW 60
Query: 61 KPSRL-----------LWVGRYPMRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR L G +KVSK L G GL TN K+EV+ F+ ++
Sbjct: 61 KHSRFFFGKNKVMIIALGKGDTDEYRDNLHKVSKQLRGEVGLLFTNKTKDEVQEYFSNFK 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D+AR+G+ A V L EGPLEQF H MEP LR+ G+P L KGVV L+ D+ VC++G
Sbjct: 121 EMDYARSGNQAQMDVTLDEGPLEQFPHSMEPQLRQLGLPAALKKGVVTLLKDYEVCKQGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
L+PE RIL+L GI+MA FK+ + C W++E E
Sbjct: 181 VLTPEQTRILKLFGIEMAEFKVQIKCMWNSETGEF 215
>gi|195384319|ref|XP_002050865.1| GJ19965 [Drosophila virilis]
gi|194145662|gb|EDW62058.1| GJ19965 [Drosophila virilis]
Length = 259
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/226 (44%), Positives = 139/226 (61%), Gaps = 13/226 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKRD+ V+L+KT +KG K+ I++ IR VE Y +I+VF +NMRN K+ R++
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRIIDDIRFCVEKYPNIFVFQVQNMRNNLLKDLRQEW 60
Query: 61 K--------PSRLLWVGRYPMRYSQA----YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K +R++ +G + + +K+SK L G GL T KEEV Y
Sbjct: 61 KRNSRFIFGKNRIMQIGLGRTKAEEVETGIHKLSKRLTGQVGLLFTEKTKEEVLEWAENY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
++AR+G ATE V LP GPLE+F H MEP LR G+P +L KGVV + SD+ VCEEG
Sbjct: 121 WAVEYARSGFKATETVTLPAGPLEEFAHSMEPHLRSLGLPTKLEKGVVTIYSDYTVCEEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWS-AEDFELYREGLDESD 213
K L+PE ARIL+LLG MA F+L + C W+ A+ F+L+ E E D
Sbjct: 181 KVLTPEQARILKLLGKPMAKFRLTMKCSWTKADGFQLHVEDDVEED 226
>gi|73950287|ref|XP_544532.2| PREDICTED: mRNA turnover protein 4 homolog isoform 1 [Canis lupus
familiaris]
Length = 240
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 133/221 (60%), Gaps = 11/221 (4%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR+ + +GR P ++VSK L G GL TN KEEV F KY
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPADEYKDNLHQVSKKLKGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ DFAR G+ AT V L GPLEQF H MEP LR+ G+P L +GVV L+SD VC+EG
Sbjct: 121 EMDFARAGNKATFTVTLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDHEVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
L+PE AR+L+L G +MA FK+ + W A+ + G D
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIRYMWDAQSGRFQQMGED 221
>gi|194207957|ref|XP_001501832.2| PREDICTED: mRNA turnover protein 4 homolog [Equus caballus]
Length = 239
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/222 (46%), Positives = 134/222 (60%), Gaps = 17/222 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKKLRGQVGLLFTNRTKEEVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
KY + D+AR G+ AT V L GPLEQF H MEP LR+ G+P L +GVV L+SD VC+
Sbjct: 118 KYTEMDYARAGNKATFTVSLEPGPLEQFPHSMEPQLRQLGLPTALQRGVVTLLSDHEVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREG 208
EG L+PE AR+L+L G +MA FK+ + W A+ L + G
Sbjct: 178 EGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDAQSGRLQQMG 219
>gi|354489567|ref|XP_003506933.1| PREDICTED: mRNA turnover protein 4 homolog [Cricetulus griseus]
Length = 239
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/228 (46%), Positives = 138/228 (60%), Gaps = 19/228 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
KY + DFAR G+ AT V L GPL+QF H EP LR+ G+P+ L KGVV L+SD+ VC+
Sbjct: 118 KYTEMDFARAGNKATLTVSLNPGPLKQFLHSTEPQLRRLGLPIALKKGVVTLLSDYEVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAED--FELYREGLDES 212
EG L+PE AR+L+L G +MA FK+ + W A+ F+ + L ES
Sbjct: 178 EGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDAQSGRFQQMDDDLPES 225
>gi|126328547|ref|XP_001377938.1| PREDICTED: mRNA turnover protein 4 homolog [Monodelphis domestica]
Length = 242
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 136/221 (61%), Gaps = 11/221 (4%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRSAW 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR+ + +GR P ++VSK L G GL +N K+EV F+KY
Sbjct: 61 KHSRIFFGKNKVMMVALGRGPTDEYKDNLHQVSKKLRGEVGLLFSNRTKKEVNEWFSKYT 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D+AR G+ AT V L GPLEQF H MEP LR+ G+P L KGVV L+SD+ VC+EG
Sbjct: 121 EMDYARAGNKATFTVSLDAGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYQVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
L+PE AR+L+L G +MA F++++ W AE + G D
Sbjct: 181 VLTPEQARVLKLFGFEMAEFRVNIKYLWQAESGKFEHLGED 221
>gi|395821115|ref|XP_003783893.1| PREDICTED: mRNA turnover protein 4 homolog [Otolemur garnettii]
Length = 239
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/224 (45%), Positives = 134/224 (59%), Gaps = 17/224 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKKLRGEVGLLFTNRSKEEVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
KY + D+AR G+ AT V L GPLEQF H MEP LR+ G+P L +GVV L+SD+ VC+
Sbjct: 118 KYTEMDYARAGNKATFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
EG L+PE AR+L+L G +MA FK+ + W A + G D
Sbjct: 178 EGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDAASGRFQQMGDD 221
>gi|432098039|gb|ELK27926.1| mRNA turnover protein 4 like protein [Myotis davidii]
Length = 239
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 134/221 (60%), Gaps = 11/221 (4%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR+ + +GR P ++VSK L G GL TN KEEV F K+
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPADEYKDNLHQVSKKLRGEVGLLFTNRMKEEVNEWFTKFA 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D+AR G+ AT V L GPLEQF H MEP LR+ G+P L KGVV L+SD+ VC+EG
Sbjct: 121 EMDYARAGNKATFTVNLDPGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
L+PE AR+L+L G +MA FK+ + W A+ + G D
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDAQSGRFQQMGDD 221
>gi|91091562|ref|XP_967054.1| PREDICTED: similar to CG1381 CG1381-PA [Tribolium castaneum]
gi|270000914|gb|EEZ97361.1| hypothetical protein TcasGA2_TC011183 [Tribolium castaneum]
Length = 234
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 128/208 (61%), Gaps = 11/208 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L+KT KKG K+ IV +RN VE + SIYVF++ NMRN K+ REQ
Sbjct: 1 MPKSKRDKKISLTKTDKKGLALKQKIVEDVRNCVEKFSSIYVFTYRNMRNELMKDVREQW 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
KPSR + +GR +K+S+ L G L T+ PK+EV F Y
Sbjct: 61 KPSRFFFGKNKVIGVGLGRNKEEEVADDLHKLSRCLKGQCALLFTDSPKDEVIEWFESYS 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
DFAR+G + V LPEG L+QF H MEP+LR+ GMP +L +GVV L+ +F VC+EG
Sbjct: 121 CEDFARSGCVVDKTVTLPEGALKQFPHSMEPYLRQLGMPTKLERGVVTLIKEFEVCKEGG 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRW 197
L+PE A+IL LG ++A FKL L W
Sbjct: 181 VLTPEQAKILEFLGHRLAVFKLDLRAAW 208
>gi|198420934|ref|XP_002129870.1| PREDICTED: similar to ribosomal protein P0-like protein [Ciona
intestinalis]
Length = 273
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 130/214 (60%), Gaps = 11/214 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L++TKK G E K+ +V +RN VE Y I+VFS NMRN K KE R
Sbjct: 1 MPKSKRDKRISLTQTKKGGLEAKQNLVTEVRNCVEKYDRIFVFSVCNMRNSKLKEVRNAW 60
Query: 61 KPSRL---------LWVGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR L GR P + YK S L G+ T+ KE+V F+KY
Sbjct: 61 KHSRFFFGKNKVMALAFGRSPETEIMNGLYKFSTKLVNEVGVLFTSKSKEDVVDWFDKYS 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
++D+ARTG+ AT VEL EGPL QF+H +EP LRK G+PV L KGVV ++ VC+E +
Sbjct: 121 EHDYARTGNIATSTVELDEGPLVQFSHAIEPHLRKLGLPVALKKGVVTMLQSHTVCKENE 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFE 203
L+ E A++L+LL I M+ F +HL C W + E
Sbjct: 181 KLTAEQAKVLKLLKIVMSQFSIHLQCMWEKDSGE 214
>gi|431906253|gb|ELK10450.1| mRNA turnover protein 4 like protein [Pteropus alecto]
Length = 238
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/224 (45%), Positives = 134/224 (59%), Gaps = 17/224 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKHLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
KY + D+AR G+ A V L GPLEQF H MEP LR+ G+P L +GVV L+SD+ VC+
Sbjct: 118 KYTEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
EG L+PE ARIL+L G +MA FK+ + W A+ + G D
Sbjct: 178 EGDVLTPEQARILKLFGYEMAEFKVTIKYMWDAQSKGFQQMGDD 221
>gi|47229851|emb|CAG07047.1| unnamed protein product [Tetraodon nigroviridis]
Length = 235
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 133/215 (61%), Gaps = 11/215 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L+KT KKG E K+ ++ +R V+ Y+++++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKISLTKTVKKGLEVKQKLITELRQCVDTYRNLFIFSVANMRNNKIKDIRTAW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR + M + +KVSK L G G+ TN K+EV+ F+ ++
Sbjct: 61 KHSRFFFGKNKVMIVALGKGVTDEYKDNLHKVSKQLRGEVGILFTNKTKDEVQDYFSHFK 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ DFAR+G+ A V L EGPLE F H MEP LR+ G+P L KGVV L+ D+ VC+EG
Sbjct: 121 EMDFARSGNQAQMDVTLDEGPLEHFPHSMEPQLRQLGLPTSLKKGVVTLLKDYEVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
L+PE RIL+L GI+MA FK+ + C W++E E
Sbjct: 181 VLTPEQTRILKLFGIEMAEFKVQIKCMWNSETGEF 215
>gi|194754443|ref|XP_001959504.1| GF12908 [Drosophila ananassae]
gi|190620802|gb|EDV36326.1| GF12908 [Drosophila ananassae]
Length = 258
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/227 (44%), Positives = 141/227 (62%), Gaps = 14/227 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKRD+ V+L+KT +KG K+ IV+ IR VE Y +I+VF +NMRN K+ R++
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRIVDDIRFCVEKYPNIFVFQVQNMRNNLLKDLRQEW 60
Query: 61 KPS--------RLLWVGRYPMRYSQA----YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + R++ +G + + +K+SK L G GL T+ KEEV Y
Sbjct: 61 KKNSRFIFGKNRVMQIGLGRKKSEEVEPDLHKLSKRLTGQVGLLFTDKSKEEVLKWAENY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
++AR+G ATE V L GPLE+F H MEP LR G+P +L KGVV + SD+ VCEEG
Sbjct: 121 WAVEYARSGFVATETVTLAAGPLEEFAHSMEPHLRSLGLPTKLEKGVVTIYSDYTVCEEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWS-AEDFELYRE-GLDESD 213
K L+PE ARIL+LLG MA F+L + C W+ AE F+L+ E ++E D
Sbjct: 181 KVLTPEQARILKLLGKPMAKFRLTMKCSWTKAEGFQLHVEDDVNEDD 227
>gi|355704498|gb|AES02247.1| mRNA turnover 4-like protein [Mustela putorius furo]
Length = 239
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 131/221 (59%), Gaps = 11/221 (4%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFLFSVANMRNSKLKDIRSAW 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR+ + +GR P ++VSK L G GL TN KEEV F KY
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPADEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYA 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ DFAR G+ AT V L GPLEQF H MEP LR+ G+P L +GVV L+SD VC+EG
Sbjct: 121 EMDFARAGNKATFTVTLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDHEVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
L+PE AR+L+L G MA FK+ + W A+ G D
Sbjct: 181 VLTPEQARVLKLFGYAMAEFKVTIKYMWDAQSGSFQHMGDD 221
>gi|392878188|gb|AFM87926.1| mRNA turnover 4-like protein [Callorhinchus milii]
Length = 236
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 136/211 (64%), Gaps = 11/211 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+S+RD+ V+L+KT KKG E K+ ++ +R V+ K +++FS +NMRN K K+ R
Sbjct: 1 MPRSRRDKKVSLTKTAKKGLEVKQNLIEELRKCVDTCKHLFIFSIKNMRNNKLKDIRNAW 60
Query: 61 KPSRL---------LWVGRYPM-RYSQA-YKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR L +G+ P Y + +KVSK L G GL T+ KEEV F+++
Sbjct: 61 KHSRFFFGKNKVMALALGKGPADEYKEGLHKVSKELSGEVGLLFTSRTKEEVIEWFDQFS 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ DFAR+G+ AT V L GPL QFTH EP LR+ G+P L KGVV L+SD+ VC+ G
Sbjct: 121 ENDFARSGNQATMAVTLDAGPLSQFTHSTEPQLRQLGLPTSLKKGVVVLLSDYDVCKAGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAE 200
L+PE AR+L+LLG++MA FK+ + C W++E
Sbjct: 181 ILTPEQARLLKLLGLEMAEFKVTISCMWNSE 211
>gi|388454320|ref|NP_001253352.1| mRNA turnover protein 4 homolog [Macaca mulatta]
gi|380813380|gb|AFE78564.1| mRNA turnover protein 4 homolog [Macaca mulatta]
gi|380813382|gb|AFE78565.1| mRNA turnover protein 4 homolog [Macaca mulatta]
gi|383410013|gb|AFH28220.1| mRNA turnover protein 4 homolog [Macaca mulatta]
gi|384947448|gb|AFI37329.1| mRNA turnover protein 4 homolog [Macaca mulatta]
Length = 239
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/224 (45%), Positives = 134/224 (59%), Gaps = 17/224 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKRLRGEVGLLFTNCTKEEVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
KY + D+AR G+ A V L GPLEQF H MEP LR+ G+P L +GVV L+SDF VC+
Sbjct: 118 KYTEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTTLKRGVVTLLSDFEVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
EG L+PE AR+L+L G +MA FK+ + W ++ + G D
Sbjct: 178 EGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGDD 221
>gi|426328081|ref|XP_004024831.1| PREDICTED: mRNA turnover protein 4 homolog [Gorilla gorilla
gorilla]
Length = 239
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 134/224 (59%), Gaps = 17/224 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKRLRGEVGLLFTNRTKEEVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
KY + D+AR G+ A V L GPLEQF H MEP LR+ G+P L +GVV L+SD+ VC+
Sbjct: 118 KYTEMDYARAGNKAAFTVSLDSGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
EG L+PE AR+L+L G +MA FK+ + W ++ + G D
Sbjct: 178 EGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGDD 221
>gi|355744968|gb|EHH49593.1| hypothetical protein EGM_00282 [Macaca fascicularis]
Length = 239
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/233 (45%), Positives = 140/233 (60%), Gaps = 19/233 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS +MRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDIYKYLFIFSVAHMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKRLRGEVGLLFTNCTKEEVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
KY + D+AR G+ A V L GPLEQF H MEP LR+ G+P L +GVV L+SDF VC+
Sbjct: 118 KYTEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTTLKRGVVTLLSDFEVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAE--DFELYREGLDESDVESA 217
EG L+PE ARIL+L G +MA FK+ + W ++ F+ + L ES ESA
Sbjct: 178 EGDVLTPEQARILKLFGYEMAEFKVTIKHMWDSQLGRFQQMGDDLPESASESA 230
>gi|209738054|gb|ACI69896.1| mRNA turnover protein 4 homolog [Salmo salar]
Length = 240
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 136/216 (62%), Gaps = 13/216 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLETKQNLIEELRKCVDIYKHLFIFSVANMRNNKLKDIRTAW 60
Query: 61 KPSR---------LLWVGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR ++ +G+ P YKVS+F G G+ TN KEEV+ F++++
Sbjct: 61 KHSRFFFGKNKVMMIAIGKGPTSEYKDNLYKVSRFPRGEVGVLFTNKTKEEVQEYFSQFK 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ +FAR G+ A + L EGPLEQF H MEP LR+ G+P L KGVV L+ D +EG
Sbjct: 121 EMNFARAGNKAGMAITLDEGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLKDHDARKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAE--DFE 203
L+PE ARIL+L GI+MA F++ + C W++E DFE
Sbjct: 181 TLTPEQARILKLFGIEMAEFRVQIKCMWNSETSDFE 216
>gi|194858067|ref|XP_001969094.1| GG25231 [Drosophila erecta]
gi|190660961|gb|EDV58153.1| GG25231 [Drosophila erecta]
Length = 255
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 136/220 (61%), Gaps = 13/220 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKRD+ V+L+KT +KG K+ IV+ IR V Y +I+VF +NMRN K+ R++
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQEW 60
Query: 61 KPS--------RLLWVGRYPMRYSQA----YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + R++ +G + + YK+SK L G GL T+ KEEV Y
Sbjct: 61 KKNSRFIFGKNRVMQIGLGRTKSEEVEPELYKLSKRLTGQVGLLFTDKSKEEVLEWAENY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
++AR+G ATE V LP GPLE F H MEP LR G+P +L KG+V L SD+ VCEEG
Sbjct: 121 WAVEYARSGFVATETVTLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWS-AEDFELYRE 207
K L+PE ARIL+L+G MA F+L + C W+ +E F+L+ E
Sbjct: 181 KVLTPEQARILKLVGKPMAKFRLTMKCSWTKSEGFQLHVE 220
>gi|444728090|gb|ELW68554.1| mRNA turnover protein 4 like protein [Tupaia chinensis]
Length = 239
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 133/221 (60%), Gaps = 11/221 (4%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR+ + +GR P ++VSK L G GL TN KEEV F KY
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPADEYRDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYA 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D+AR G+ A V L GPLEQF H MEP LR+ G+P L +GVV L+SD+ VC+EG
Sbjct: 121 EMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
L+PE AR+L+L G +MA FK+ + W A+ + G D
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTMKYVWDAQSGRFQQVGDD 221
>gi|197246024|gb|AAI68898.1| Mrto4 protein [Rattus norvegicus]
Length = 239
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 131/213 (61%), Gaps = 17/213 (7%)
Query: 2 PKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIK 61
PKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R K
Sbjct: 1 PKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWK 60
Query: 62 PSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFNK 107
SR+ + +GR P S YK VSK L G GL TN KEEV F K
Sbjct: 61 HSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTK 117
Query: 108 YEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEE 167
Y + DFAR G+ AT V L GPL+QF H MEP LR+ G+P L KGVV L+SD+ VC+E
Sbjct: 118 YTEMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKE 177
Query: 168 GKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
G L+PE AR+L+L G +MA FK+ + W A+
Sbjct: 178 GDVLTPEQARVLKLFGYEMAEFKVTIKYMWDAQ 210
>gi|19921958|ref|NP_610554.1| ribosomal protein LP0-like [Drosophila melanogaster]
gi|7303797|gb|AAF58844.1| ribosomal protein LP0-like [Drosophila melanogaster]
gi|16769692|gb|AAL29065.1| LD47064p [Drosophila melanogaster]
gi|220944390|gb|ACL84738.1| CG1381-PA [synthetic construct]
gi|220954266|gb|ACL89676.1| CG1381-PA [synthetic construct]
Length = 256
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 137/220 (62%), Gaps = 13/220 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKRD+ V+L+KT +KG K+ IV+ IR V Y +I+VF +NMRN K+ R+++
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQEL 60
Query: 61 KPS--------RLLWVGRYPMRYSQA----YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + R++ +G + + +K+SK L G GL T+ KEEV Y
Sbjct: 61 KKNSRFIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
++AR+G ATE V LP GPLE F H MEP LR G+P +L KG+V L SD+ VCEEG
Sbjct: 121 WAVEYARSGFVATETVTLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWS-AEDFELYRE 207
K L+PE ARIL+L+G MA F+L + C W+ +E F+L+ E
Sbjct: 181 KVLTPEQARILKLVGKPMAKFRLTMKCSWTKSEGFQLHVE 220
>gi|156350290|ref|XP_001622223.1| predicted protein [Nematostella vectensis]
gi|156208693|gb|EDO30123.1| predicted protein [Nematostella vectensis]
Length = 218
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 131/214 (61%), Gaps = 17/214 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR++ V+L++TKKKG E K +V ++ V+ Y +YVFS ENMRN K K+ RE+
Sbjct: 1 MPKSKRNKIVSLTRTKKKGLELKSGLVKEVQECVDEYAFVYVFSVENMRNSKLKDAREKW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR + +G+ P YK VSK L G GL TN K++V S F
Sbjct: 61 KQSRFFFGKNKVMAIALGKTP---EDEYKENLCEVSKRLKGQCGLLFTNQSKDDVTSWFK 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
+Y + DFAR G+ A +L GPL+QF H EP LR+ G+P L KGVV L+SD VC+
Sbjct: 118 EYSEMDFARAGNKAICDFQLDAGPLDQFPHSTEPNLRQLGLPTALKKGVVTLLSDHTVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
EG L+PE ARIL+L G MA F + L+CRWS +
Sbjct: 178 EGDVLTPEQARILKLFGNPMAEFHITLLCRWSKD 211
>gi|5815233|gb|AAD52608.1|AF173378_1 60S acidic ribosomal protein PO [Homo sapiens]
Length = 239
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 134/224 (59%), Gaps = 17/224 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKTLRGEVGLLFTNRTKEEVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
KY + D+AR G+ A V L GPLEQF H MEP LR+ G+P L +GVV L+SD+ VC+
Sbjct: 118 KYTEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
EG L+PE AR+L+L G +MA FK+ + W ++ + G D
Sbjct: 178 EGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGDD 221
>gi|397486739|ref|XP_003814481.1| PREDICTED: mRNA turnover protein 4 homolog [Pan paniscus]
Length = 239
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 134/224 (59%), Gaps = 17/224 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQKLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKRLRGEVGLLFTNRTKEEVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
KY + D+AR G+ A V L GPLEQF H MEP LR+ G+P L +GVV L+SD+ VC+
Sbjct: 118 KYTEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
EG L+PE AR+L+L G +MA FK+ + W ++ + G D
Sbjct: 178 EGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGDD 221
>gi|195154685|ref|XP_002018252.1| GL16862 [Drosophila persimilis]
gi|194114048|gb|EDW36091.1| GL16862 [Drosophila persimilis]
Length = 251
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 144/232 (62%), Gaps = 15/232 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKRD+ V+L+KT +KG K+ V+ IR V Y +I+VF +NMRN K+ R++
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRFVDDIRFCVGKYPNIFVFQVQNMRNSILKDLRQEW 60
Query: 61 KP-SRLLW---------VGRYPMRYSQA--YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K SR+++ +GR +A +K++K L G GL T KEEV Y
Sbjct: 61 KNNSRIIFGKNRVMQIGLGRTKSEEMEAGLHKLAKRLNGQVGLLFTEKSKEEVLEWAENY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
++AR+G ATE V LP GPLE F H MEP LR GMP +L KG+V + SD+ VCEEG
Sbjct: 121 WAVEYARSGFIATETVTLPAGPLEDFAHSMEPHLRSLGMPTKLEKGIVTIYSDYTVCEEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAED-FELYRE-GL-DESDVESA 217
K L+PE ARIL+L+G MA F++ + C W+ D F+L+ E G+ DE+ V+SA
Sbjct: 181 KVLTPEQARILKLVGKPMAKFRMTIQCSWTKSDGFQLHVEDGINDETQVDSA 232
>gi|125809406|ref|XP_001361102.1| GA12545 [Drosophila pseudoobscura pseudoobscura]
gi|54636275|gb|EAL25678.1| GA12545 [Drosophila pseudoobscura pseudoobscura]
Length = 252
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 144/232 (62%), Gaps = 15/232 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKRD+ V+L+KT +KG K+ V+ IR V Y +I+VF +NMRN K+ R++
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRFVDDIRFCVGKYPNIFVFQVQNMRNSILKDLRQEW 60
Query: 61 KP-SRLLW---------VGRYPMRYSQA--YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K SR+++ +GR +A +K++K L G GL T KEEV Y
Sbjct: 61 KNNSRIIFGKNRVMQIGLGRTKSEEMEAGLHKLAKRLNGQVGLLFTEKSKEEVLEWAENY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
++AR+G ATE V LP GPLE F H MEP LR GMP +L KG+V + SD+ VCEEG
Sbjct: 121 WAVEYARSGFIATETVTLPAGPLEDFAHSMEPHLRSLGMPTKLEKGIVTIYSDYTVCEEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAED-FELYRE-GL-DESDVESA 217
K L+PE ARIL+L+G MA F++ + C W+ D F+L+ E G+ DE+ V+SA
Sbjct: 181 KVLTPEQARILKLVGKPMAKFRMTIQCSWTKSDGFQLHVEDGINDETQVDSA 232
>gi|14042338|dbj|BAB55205.1| unnamed protein product [Homo sapiens]
Length = 239
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 134/224 (59%), Gaps = 17/224 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKRLRGEVGLLFTNRTKEEVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
KY + D+AR G+ A V L GPLEQF H MEP LR+ G+P L +GVV L+SD+ VC+
Sbjct: 118 KYTEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
EG L+PE AR+L+L G +MA FK+ + W ++ + G D
Sbjct: 178 EGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGDD 221
>gi|18490987|ref|NP_057267.2| mRNA turnover protein 4 homolog [Homo sapiens]
gi|114554364|ref|XP_001158877.1| PREDICTED: mRNA turnover protein 4 homolog isoform 2 [Pan
troglodytes]
gi|297666239|ref|XP_002811429.1| PREDICTED: mRNA turnover protein 4 homolog [Pongo abelii]
gi|51316541|sp|Q9UKD2.2|MRT4_HUMAN RecName: Full=mRNA turnover protein 4 homolog
gi|12804309|gb|AAH03013.1| MRNA turnover 4 homolog (S. cerevisiae) [Homo sapiens]
gi|13676344|gb|AAH06504.1| MRNA turnover 4 homolog (S. cerevisiae) [Homo sapiens]
gi|31979225|gb|AAP68821.1| acidic ribosomal protein PO-like [Homo sapiens]
gi|119615279|gb|EAW94873.1| chromosome 1 open reading frame 33, isoform CRA_a [Homo sapiens]
gi|119615281|gb|EAW94875.1| chromosome 1 open reading frame 33, isoform CRA_a [Homo sapiens]
gi|193785840|dbj|BAG51275.1| unnamed protein product [Homo sapiens]
gi|410207434|gb|JAA00936.1| mRNA turnover 4 homolog [Pan troglodytes]
gi|410260732|gb|JAA18332.1| mRNA turnover 4 homolog [Pan troglodytes]
gi|410288378|gb|JAA22789.1| mRNA turnover 4 homolog [Pan troglodytes]
gi|410353463|gb|JAA43335.1| mRNA turnover 4 homolog [Pan troglodytes]
Length = 239
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 134/224 (59%), Gaps = 17/224 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKRLRGEVGLLFTNRTKEEVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
KY + D+AR G+ A V L GPLEQF H MEP LR+ G+P L +GVV L+SD+ VC+
Sbjct: 118 KYTEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
EG L+PE AR+L+L G +MA FK+ + W ++ + G D
Sbjct: 178 EGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGDD 221
>gi|355557609|gb|EHH14389.1| hypothetical protein EGK_00309 [Macaca mulatta]
Length = 239
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 131/214 (61%), Gaps = 17/214 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKRLRGEVGLLFTNCTKEEVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
KY + D+AR G+ A V L GPLEQF H MEP LR+ G+P L +GVV L+SDF VC+
Sbjct: 118 KYTEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTTLKRGVVTLLSDFEVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
EG L+PE AR+L+L G +MA FK+ + W ++
Sbjct: 178 EGDVLTPEQARVLKLFGYEMAEFKVTIKHMWDSQ 211
>gi|149262895|ref|XP_001480610.1| PREDICTED: mRNA turnover protein 4 homolog isoform 2 [Mus musculus]
Length = 239
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 131/214 (61%), Gaps = 17/214 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDDLHQVSKKLRGEVGLLFTNRTKEEVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
KY + DFAR G+ AT V L GPL+QF H ME LR+ G+P L KGVV L+SD+ VC+
Sbjct: 118 KYTEMDFARAGNKATLTVSLDPGPLKQFPHSMELQLRQLGLPTALEKGVVTLLSDYEVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
EG L+PE ARIL+L G +MA FK+ + W A+
Sbjct: 178 EGDVLTPEQARILKLFGYEMAEFKVTIKYMWDAQ 211
>gi|195475256|ref|XP_002089900.1| GE21775 [Drosophila yakuba]
gi|194176001|gb|EDW89612.1| GE21775 [Drosophila yakuba]
Length = 254
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 139/230 (60%), Gaps = 14/230 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKRD+ V+L+KT +KG K+ IV+ IR V Y +I+VF +NMRN K+ R++
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQEW 60
Query: 61 KP-SRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K SR ++ M+ + +K+SK L G GL T+ KEEV Y
Sbjct: 61 KKNSRFIFGKNRVMQIGLGRKKSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
++AR+G ATE V LP GPLE F H MEP LR G+P +L KG+V L SD+ VCEEG
Sbjct: 121 WAVEYARSGFVATETVTLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWS-AEDFELYREGLDESDVESA 217
K L+PE ARIL+L+G MA F+L + C W+ E F+L+ E D +D E A
Sbjct: 181 KVLTPEQARILKLVGKPMAKFRLTMKCSWTKGEGFQLHVED-DLNDEEQA 229
>gi|195026361|ref|XP_001986239.1| GH20636 [Drosophila grimshawi]
gi|193902239|gb|EDW01106.1| GH20636 [Drosophila grimshawi]
Length = 247
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 96/218 (44%), Positives = 136/218 (62%), Gaps = 13/218 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKRD+ V+L+KT +KG K+ I++ IR VE Y +I+VF +NMRN K+ R++
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRIIDDIRFCVEKYPNIFVFQVQNMRNNLLKDLRQEW 60
Query: 61 KPS--------RLLWVGRYPMRYSQA----YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + R++ +G + + +K+SK L G GL T K +V + Y
Sbjct: 61 KQNSRFIFGKNRIMQIGLGRTKAEEVETGIHKLSKRLSGQVGLLFTEKSKADVLAWAENY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
++AR+G ATE V LP GPLE+F H MEP LR G+P +L KGVV + SD+ VCEEG
Sbjct: 121 WAVEYARSGFAATETVTLPAGPLEEFAHSMEPHLRSLGLPTKLEKGVVTIYSDYTVCEEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAED-FELY 205
K L+PE ARIL+LLG MA F+L + C W+ +D F+L+
Sbjct: 181 KILTPEQARILKLLGKPMAKFRLTMKCSWTKDDGFQLH 218
>gi|94392404|ref|XP_001004798.1| PREDICTED: mRNA turnover protein 4 homolog [Mus musculus]
Length = 239
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 131/214 (61%), Gaps = 17/214 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDDLHQVSKKLRGEVGLLFTNRTKEEVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
KY + DFAR G+ AT V L GPL+QF H ME LR+ G+P L KGVV L+SD+ VC+
Sbjct: 118 KYTEMDFARAGNKATLTVSLDPGPLKQFPHSMELQLRQLGLPTALEKGVVTLLSDYEVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
EG L+PE ARIL+L G +MA FK+ + W A+
Sbjct: 178 EGDVLTPEQARILKLFGDEMAEFKVTIKYMWDAQ 211
>gi|195333033|ref|XP_002033196.1| GM20550 [Drosophila sechellia]
gi|194125166|gb|EDW47209.1| GM20550 [Drosophila sechellia]
Length = 252
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 136/220 (61%), Gaps = 13/220 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKRD+ V+L+KT +KG K+ IV+ IR V Y +I+VF +NMRN K+ R++
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQEW 60
Query: 61 KPS--------RLLWVGRYPMRYSQA----YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + R++ +G + + +K+SK L G GL T+ KEEV Y
Sbjct: 61 KKNSRFIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
++AR+G ATE V LP GPLE F H MEP LR G+P +L KG+V L SD+ VCEEG
Sbjct: 121 WAVEYARSGFVATETVNLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWS-AEDFELYRE 207
K L+PE ARIL+L+G MA F+L + C W+ +E F+L+ E
Sbjct: 181 KVLTPEQARILKLVGKPMAKFRLTMKCSWTKSEGFQLHVE 220
>gi|344283447|ref|XP_003413483.1| PREDICTED: mRNA turnover protein 4 homolog [Loxodonta africana]
Length = 239
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 131/214 (61%), Gaps = 17/214 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
K+ + D+AR G+ A V L GPLEQF H MEP LR+ G+P L KGVV L+SD+ VC+
Sbjct: 118 KFTEMDYARAGNKAMFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
EG L+PE ARIL+L G +MA FK+ + W A+
Sbjct: 178 EGDVLTPEQARILKLFGYEMAEFKVTIKYVWDAQ 211
>gi|195551694|ref|XP_002076278.1| GD15262 [Drosophila simulans]
gi|194201927|gb|EDX15503.1| GD15262 [Drosophila simulans]
Length = 256
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 136/220 (61%), Gaps = 13/220 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKRD+ V+L+KT +KG K+ IV+ IR V Y +I+VF +NMRN K+ R++
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQEW 60
Query: 61 KPS--------RLLWVGRYPMRYSQA----YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + R++ +G + + +K+SK L G GL T+ KEEV Y
Sbjct: 61 KKNSRFIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
++AR+G ATE V LP GPLE F H MEP LR G+P +L KG+V L SD+ VCEEG
Sbjct: 121 WAVEYARSGFVATETVTLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWS-AEDFELYRE 207
K L+PE ARIL+L+G MA F+L + C W+ +E F+L+ E
Sbjct: 181 KVLTPEQARILKLVGKPMAKFRLTMKCSWTKSEGFQLHVE 220
>gi|417409058|gb|JAA51053.1| Putative protein involved in mrna turnover, partial [Desmodus
rotundus]
Length = 253
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 132/221 (59%), Gaps = 11/221 (4%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K R
Sbjct: 13 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKHLFIFSVANMRNSKLKAIRHAW 72
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR+ + +GR P ++VSK L G GL T+ KEEV F KY
Sbjct: 73 KHSRMFFGKNKVMMVALGRSPCDEYKDNLHQVSKKLRGEVGLLFTDRTKEEVNEWFTKYT 132
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D+AR G+ A V L GPLEQF H MEP LR+ G+P L +GVV L+SD+ VC+EG
Sbjct: 133 EMDYARAGNKAPFTVNLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGD 192
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
L+PE ARIL+L G +MA FK+ + W A ++ G D
Sbjct: 193 LLTPEQARILKLFGYEMAEFKVTIKYMWDAHSGRFHQMGDD 233
>gi|402853257|ref|XP_003891314.1| PREDICTED: mRNA turnover protein 4 homolog [Papio anubis]
Length = 244
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 131/226 (57%), Gaps = 16/226 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLWVGRYPMRYSQAY----------------KVSKFLCGNTGLFLTNMPKEEVESL 104
K SR L + ++ Y +VSK L G GL TN KEEV
Sbjct: 61 KHSRCLGHATDTLITTKCYLPLKSTSFSLLQLVLGRVSKRLRGEVGLLFTNRTKEEVNEW 120
Query: 105 FNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVV 164
F KY + D+AR G+ A V L GPLEQF H MEP LR+ G+P L +GVV L+SDF V
Sbjct: 121 FTKYTEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTTLKRGVVTLLSDFEV 180
Query: 165 CEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
C+EG L+PE ARIL+L G +MA FK+ + W ++ + G D
Sbjct: 181 CKEGDVLTPEQARILKLFGYEMAEFKVTIKYMWDSQSGRFQQMGDD 226
>gi|260790436|ref|XP_002590248.1| hypothetical protein BRAFLDRAFT_254316 [Branchiostoma floridae]
gi|229275439|gb|EEN46259.1| hypothetical protein BRAFLDRAFT_254316 [Branchiostoma floridae]
Length = 238
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 131/220 (59%), Gaps = 12/220 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L+ T+KKG E K +V+ IR V+ Y I+ FS ENMRN K KE R
Sbjct: 1 MPKSKRDKKISLTSTRKKGLELKRNLVDQIRECVDQYARIFTFSVENMRNSKLKEVRNVW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR + M + ++VS+ L G TG+F TN KEEV F++Y+
Sbjct: 61 KHSRFFFGKNKVMSVALGRGAEDKYRENLHRVSQRLRGQTGMFFTNKTKEEVVEWFSQYQ 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
DFAR+G+TA + V L EGPL QF+H MEP LR+ G+P +L +G + L+SD VC G
Sbjct: 121 LKDFARSGNTAVQTVVLFEGPLPQFSHSMEPQLRQLGLPTKLERGEITLISDHTVCTAGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAED-FELYREG 208
L+PE ARIL+LL M F + L WS + FEL G
Sbjct: 181 VLTPEQARILKLLDTPMVNFHITLDSVWSNDGTFELLERG 220
>gi|37537520|ref|NP_076025.1| mRNA turnover protein 4 homolog [Mus musculus]
gi|13543116|gb|AAH05734.1| MRT4, mRNA turnover 4, homolog (S. cerevisiae) [Mus musculus]
gi|148681356|gb|EDL13303.1| RIKEN cDNA 2610012O22, isoform CRA_a [Mus musculus]
Length = 238
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/214 (48%), Positives = 131/214 (61%), Gaps = 18/214 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
KY + DFAR G+ AT V L GPL+QF H MEP LR+ G+P L KGVV L+SD+ VC+
Sbjct: 118 KYTEMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCK 177
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
EG L+PE ARIL L G +MA FK+ + W A+
Sbjct: 178 EGDVLTPEQARIL-LFGYEMAEFKVIIKYMWDAQ 210
>gi|340375833|ref|XP_003386438.1| PREDICTED: mRNA turnover protein 4 homolog [Amphimedon
queenslandica]
Length = 237
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 90/208 (43%), Positives = 125/208 (60%), Gaps = 11/208 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR+R +L+ T+KKG E K ++ +R+ + Y ++YVFS ENMRN K K+ R Q
Sbjct: 1 MPKSKRNRVYSLTNTRKKGSERKASLLQDVRDCCDQYSNLYVFSVENMRNSKLKDVRTQW 60
Query: 61 KPSRLLWVGRYPMRYSQA-----------YKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR M+ + +K++ FL GN GL TN V+S F Y
Sbjct: 61 KHSRFFLGKNRVMQLALGNDEAQEYKEGLHKIANFLRGNVGLLFTNEDNSLVKSWFESYY 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D+AR+G A +++ L EGPL+QFTH +EP LR G+P +L KG V L+ D VVC G
Sbjct: 121 EMDYARSGFVAEQRIALEEGPLDQFTHSIEPHLRSLGLPTKLEKGKVILLQDHVVCSPGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRW 197
L+PE ARIL+LLG +A F++ L+ W
Sbjct: 181 TLTPEQARILKLLGFPLAKFEVRLLAHW 208
>gi|443721008|gb|ELU10513.1| hypothetical protein CAPTEDRAFT_156508 [Capitella teleta]
Length = 263
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 132/211 (62%), Gaps = 11/211 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L++T KKG E K+ ++ I N V+ Y I++FS +NMRN K+ R++
Sbjct: 1 MPKSKRDKKISLTQTNKKGLELKQKLIEDIHNCVDQYARIFLFSVQNMRNTHLKDVRQEW 60
Query: 61 KPSRLLW---------VGRYP-MRYSQA-YKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR + +G+ P Y A +K+++ L G GL TN KEEV + F KY
Sbjct: 61 KHSRFFFGKNKVMSFALGQTPETEYRDALHKLTRKLQGQVGLLFTNSTKEEVIAWFEKYS 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ DFAR+G+ AT+ V + EGPL F+H MEP LR+ G+P L KGVV L ++ VC+ G+
Sbjct: 121 EPDFARSGNEATQTVTIDEGPLASFSHSMEPQLRQLGLPTTLKKGVVTLTQNYEVCKLGQ 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAE 200
L+PE ARIL+L KMA F + + WS +
Sbjct: 181 TLTPEQARILKLFDYKMANFAVSIEGLWSND 211
>gi|303289365|ref|XP_003063970.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454286|gb|EEH51592.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 291
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 141/228 (61%), Gaps = 18/228 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKS+RD+ + L++TKKKG+E K +++++R A++ Y S+Y F EN+RN FKE + +
Sbjct: 1 MPKSRRDKVIALTQTKKKGREWKSGLIDTVREALDEYDSVYAFRTENLRNNTFKELKSDL 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
S ++G + + +++S + G+ G+ +TN+ KE++E KY
Sbjct: 61 AESSRFFMGSNKVLQVALGKGPEDEQREGLHQLSAHVRGHAGIVMTNLRKEDLEKALEKY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQ-----FTHEMEPFLRKQGMPVRLNKGVVELVSDFV 163
+ D+ARTGS A E + + EGP+ H MEP LRK GMP +LN+GV+EL++D V
Sbjct: 121 KVSDYARTGSLAPETIVIEEGPVHGPHGGLMEHTMEPTLRKNGMPTKLNRGVIELLADHV 180
Query: 164 VCEEGKPLSPESARILRLLGIKMATFKLHLICRW-SAEDFELYREGLD 210
VC EG+ +SP++A +LRL G ++ATF + L+C W +FE Y L+
Sbjct: 181 VCREGEHVSPQAAILLRLFGHELATFSIDLLCGWREGGEFEEYDAALE 228
>gi|307104711|gb|EFN52963.1| hypothetical protein CHLNCDRAFT_58680 [Chlorella variabilis]
Length = 250
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 143/242 (59%), Gaps = 26/242 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR++ V L+K KKK K KE ++N++R V+ Y SIY+F FEN RN +FKE REQ
Sbjct: 1 MPKSKRNKLVALTKVKKKDKSWKEGLINTVRAYVDEYPSIYLFKFENFRNEQFKELREQH 60
Query: 61 KPSRLLWVG-----RYPMRYSQAYKVSKFLC-------GNTGLFLTNMPKEEVESLFNKY 108
+ + +G R + + A + LC G+ GLF T +P+ EVE++F +
Sbjct: 61 RNTSRFCMGSNKVLRVALGHDAADEYRTNLCQLAGRIRGSAGLFFTKLPRGEVEAIFEGF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL----EQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVV 164
E D+AR G+ ATE L GPL E H +EP LR+ G+P +LNKGVVELV+DF V
Sbjct: 121 EVVDYARAGARATEDFSLEAGPLTLYGEPLAHTLEPTLRQHGLPTKLNKGVVELVADFAV 180
Query: 165 CEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREG----------LDESDV 214
C+EG+ L A +LR+ IK A+FK+ L+ W A++ E E LD++D+
Sbjct: 181 CKEGQKLKSNQAALLRMFDIKQASFKMQLLAVWEADEVETLAEDEEGSEGGGSELDDADL 240
Query: 215 ES 216
E
Sbjct: 241 EG 242
>gi|391343175|ref|XP_003745888.1| PREDICTED: mRNA turnover protein 4 homolog [Metaseiulus
occidentalis]
Length = 348
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 132/220 (60%), Gaps = 13/220 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP SKR+R V+L++ K+KG EHK+ +V IR A++ Y S+Y+FS +NMRN K KE RE+
Sbjct: 1 MPVSKRNRVVSLTQAKRKGLEHKQKLVEEIRKALDQYDSVYIFSIQNMRNNKLKEVREEW 60
Query: 61 KPSRLLWVGRYPMRY------------SQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + +G+ + +KVS+ L G GL LT+ P+EEV + F +
Sbjct: 61 KGTSKFIMGKNKVLQLALGRNAENEIADNIHKVSERLLGQCGLLLTSQPEEEVLAWFEDF 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
+ DFAR G ATE V L E L+ F H MEP R+ G+P RL +G ++L ++F VC EG
Sbjct: 121 READFARAGFVATETVVLKENDLDDFPHSMEPQFRRLGLPTRLVRGKIQLTNEFTVCNEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAE-DFELYRE 207
L+PE A +L+ GI+MA F + L C W + F + RE
Sbjct: 181 DVLTPEMADVLKHKGIQMAEFHITLECVWKKDGSFRVLRE 220
>gi|221121850|ref|XP_002154208.1| PREDICTED: mRNA turnover protein 4 homolog [Hydra magnipapillata]
Length = 224
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 133/219 (60%), Gaps = 14/219 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKS+R++ ++LSKT KK + K+ +V+ IR + Y S+YVFS ENMRN K K+ R++
Sbjct: 1 MPKSRRNKVISLSKTTKKEFQTKKSLVDEIRKCCDEYTSLYVFSVENMRNDKLKDVRQKW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR + M + +K+S L GN G+ TN ++ V+ F K+
Sbjct: 61 KTSRFFYGKNKVMAFGLGRTKEIEYKENLHKISSELVGNVGIMFTNESQQVVKEWFEKFS 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQ--FTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEE 167
+ D+AR+G+TAT+ V +PEGPL++ F + MEP LR G+PV L KGV+ L ++ VC+E
Sbjct: 121 EVDYARSGNTATQTVTIPEGPLDENSFQYTMEPVLRALGLPVILQKGVIHLTQEYTVCKE 180
Query: 168 GKPLSPESARILRLLGIKMATFKLHLICRW-SAEDFELY 205
G LSPE ++L+L +A F + L C W S FEL+
Sbjct: 181 GDTLSPEQCKVLKLFSYPLAVFHITLKCVWHSTGQFELF 219
>gi|340720236|ref|XP_003398547.1| PREDICTED: mRNA turnover protein 4 homolog [Bombus terrestris]
Length = 242
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 126/202 (62%), Gaps = 11/202 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L+KT KKG K+ IV +RN VE Y I++ S NMRN K K+ R +
Sbjct: 1 MPKSKRDKKISLTKTNKKGLALKQQIVEDVRNCVEKYDRIFLLSVHNMRNNKLKDLRSEW 60
Query: 61 KPSRL---------LWVGRYPMRYSQ--AYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR L G+ P + +K+S L G GL TN K+EV +YE
Sbjct: 61 KDSRFFFGKNKVIALAFGKLPETEAAEGLHKLSLALRGQCGLLFTNRSKKEVLKWMEEYE 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D+AR+G A E + L EGP+ +F+H +EP LR+ GMP L KGVV L+ D++VC+EG+
Sbjct: 121 EIDYARSGFVAQETIVLHEGPMPEFSHSIEPHLRQLGMPTALQKGVVTLIKDYIVCKEGQ 180
Query: 170 PLSPESARILRLLGIKMATFKL 191
L+PE ARIL+LL +ATF+L
Sbjct: 181 TLNPEQARILKLLDKPLATFRL 202
>gi|357628814|gb|EHJ77989.1| hypothetical protein KGM_17384 [Danaus plexippus]
Length = 245
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 129/209 (61%), Gaps = 11/209 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG K+ ++ IRN++ Y+ I++F+ +NMRN K K+ R +
Sbjct: 1 MPKSKRDKKVSLTKTNKKGLLLKQKTIDEIRNSLSKYEHIFLFTVDNMRNTKLKDLRNEW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR + M + Q ++SK L G GL +TN +V F E
Sbjct: 61 KDSRFFFGKNKVMAVALGRQKTDEVEDQLNQISKRLKGQCGLLMTNRDVPDVLEWFKNLE 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+FAR+G AT+ V LP+GPL F+H +EP LR+ G+P L +GV+ L+ ++ VC++G
Sbjct: 121 ATEFARSGFIATKDVILPQGPLPDFSHTIEPHLRRLGLPTSLERGVINLIKEYQVCKKGS 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWS 198
L+PE A IL+LLGI+MA FK+ + C W+
Sbjct: 181 ALTPEQASILKLLGIQMAQFKIVIKCHWT 209
>gi|326430524|gb|EGD76094.1| mRNA turnover protein 4 mrt4 [Salpingoeca sp. ATCC 50818]
Length = 216
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 130/216 (60%), Gaps = 11/216 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V+L++T +KG + K+ +V I +A + + +++FS ENMRN K KE R
Sbjct: 1 MPKSKRAKVVSLTQTDRKGLQTKKALVQQIHDACDEFARVFIFSVENMRNAKLKEVRTGW 60
Query: 61 KPSRLLWVGRYPMRY-----------SQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
+ SR + M + +++SK L GN G+ TN P+E+VE F YE
Sbjct: 61 RDSRFFFGKNKVMSIAFGLDPESEYRTNMHEISKRLSGNVGVLFTNRPREDVEKWFKTYE 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
D+AR G+ +T+ V L GPL QF+H +EP LRK G+P L +G+V L D+ +CE+G
Sbjct: 121 VKDYARAGNPSTQAVRLMAGPLPQFSHALEPQLRKLGLPTSLKRGIVTLEKDYTICEKGV 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFELY 205
LSPE AR+L+L MATF+++L+ + E + Y
Sbjct: 181 TLSPEQARLLKLFEHPMATFRINLLAVYDEEAVQDY 216
>gi|156544911|ref|XP_001599473.1| PREDICTED: mRNA turnover protein 4 homolog [Nasonia vitripennis]
Length = 236
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 124/202 (61%), Gaps = 11/202 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L+KT KKG E K+ IV +R E YK+I +FS ENMRN K K+ R +
Sbjct: 1 MPKSKRDKKISLTKTSKKGLELKQQIVQDVRTCAEKYKNIILFSVENMRNNKLKDLRVEW 60
Query: 61 KPSRLLWVGRYPMRYSQA-----------YKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
+ SR + + + + +S L G GLF TN K++V +Y
Sbjct: 61 RGSRFFFGKNKIVALALGTTKESEIAEGIHILSSNLQGQCGLFFTNEKKKKVLQWMREYG 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D+AR+G +E +ELP GPL F+H +EP LR+ GMP L KGVV L+ D+ VC EG+
Sbjct: 121 EDDYARSGFVTSETIELPAGPLPDFSHSIEPHLRQLGMPTSLQKGVVTLLKDYTVCTEGQ 180
Query: 170 PLSPESARILRLLGIKMATFKL 191
L+PE ARIL+LLG +ATFKL
Sbjct: 181 TLTPEQARILKLLGRPLATFKL 202
>gi|255084587|ref|XP_002508868.1| predicted protein [Micromonas sp. RCC299]
gi|226524145|gb|ACO70126.1| predicted protein [Micromonas sp. RCC299]
Length = 261
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 134/214 (62%), Gaps = 17/214 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKS+RD+ + L++TKKK +E K ++ IR A+E Y+S++VF N+RN FKE + +
Sbjct: 1 MPKSRRDKVIALTQTKKKDREWKGGLIEQIREALEQYQSVFVFRCANLRNNAFKELKATL 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
S ++G + + +++++ + G+ G+ TN+ KE+VES KY
Sbjct: 61 ADSSRFFMGSNKVMQVALGKGPEDEQRDGLHQLAEHVRGHAGVVFTNLTKEDVESAMAKY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQ-----FTHEMEPFLRKQGMPVRLNKGVVELVSDFV 163
E D+ARTG+ A E + + +GP+ H MEP LRK GMP +LN+GV+EL++D
Sbjct: 121 EVSDYARTGTVARETIVVEKGPVHGPHGGLMEHTMEPTLRKNGMPTKLNRGVIELLADHA 180
Query: 164 VCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+C+EG+ +SP+ A +LRL G ++ATFK+ L+C W
Sbjct: 181 LCKEGEHISPQGAILLRLFGHELATFKMDLLCGW 214
>gi|170045469|ref|XP_001850330.1| mRNA turnover protein 4 [Culex quinquefasciatus]
gi|167868504|gb|EDS31887.1| mRNA turnover protein 4 [Culex quinquefasciatus]
Length = 282
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 128/216 (59%), Gaps = 19/216 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L+KT +KG +K+ I+ IR + Y +I++FS +NMRN K K+ R
Sbjct: 1 MPKSKRDKKISLTKTDRKGLSNKQQIIEDIRECRQKYDNIFLFSVQNMRNSKLKDIRTAW 60
Query: 61 KPSRLLWVGRYPMRYSQAY-------------------KVSKFLCGNTGLFLTNMPKEEV 101
K SR + M+ + K+ + + G GL T+ KE V
Sbjct: 61 KNSRFFFGKNRVMQLGLDFVSDEGEDGAADPKLGKDLEKLREQMVGQCGLLFTSETKETV 120
Query: 102 ESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSD 161
F+ Y +FAR+G AT+KV L EGPLE+F+H +EP LR GMP +L+KGVV L +
Sbjct: 121 LDWFDSYSADEFARSGFRATKKVHLKEGPLEEFSHAIEPHLRSLGMPTKLDKGVVTLYKE 180
Query: 162 FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
F VCE+GK LSPE ARIL+LLG MA FK+ + C +
Sbjct: 181 FTVCEKGKVLSPEQARILKLLGKPMAKFKVIINCAY 216
>gi|380017734|ref|XP_003692802.1| PREDICTED: mRNA turnover protein 4 homolog [Apis florea]
Length = 239
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 123/202 (60%), Gaps = 11/202 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L+KT KKG K+ IV +RN VE Y I++ S NMRN K K+ R +
Sbjct: 1 MPKSKRDKKISLTKTSKKGLALKQQIVEDVRNCVEKYARIFLLSVHNMRNNKLKDLRSEW 60
Query: 61 KPSRL---------LWVGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR L +G+ P +K+S L G GL TN K+EV +YE
Sbjct: 61 KDSRFFFGKNKVIALALGKSPENEVVENLHKLSLALRGQCGLLFTNRSKKEVLKWMREYE 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D+AR+G E + LPEGP+ F+H +EP LR+ GMP L KGVV L+ ++ VC+ G+
Sbjct: 121 EIDYARSGFITQETITLPEGPIPDFSHSIEPHLRQLGMPTALQKGVVTLIKEYTVCKIGQ 180
Query: 170 PLSPESARILRLLGIKMATFKL 191
L+PE ARIL+L G +ATFKL
Sbjct: 181 ALTPEQARILKLFGKPLATFKL 202
>gi|196016567|ref|XP_002118135.1| hypothetical protein TRIADDRAFT_51180 [Trichoplax adhaerens]
gi|190579261|gb|EDV19360.1| hypothetical protein TRIADDRAFT_51180 [Trichoplax adhaerens]
Length = 236
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 133/230 (57%), Gaps = 30/230 (13%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR++ V+L+KTK K +HK+ ++ IR +NY+ +VFS ENMRN K KE R
Sbjct: 1 MPKSKRNKIVSLTKTKGKNFDHKKDLIEQIRTCADNYQHAFVFSVENMRNNKLKEVRNLW 60
Query: 61 KPSRL---------LWVGRYPM-RYSQA-YKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR + +GR Y + ++K L GN GL TN K+E F+K+
Sbjct: 61 KDSRFFLGKNNIAQIALGRSVQDEYKDGLHHIAKKLKGNVGLLFTNCNKDEAIQWFSKFA 120
Query: 110 DYDFARTGSTATEKVELPEG-------------------PLEQFTHEMEPFLRKQGMPVR 150
+ D+AR G AT VELPEG P++QF H MEP+LR+ GMP
Sbjct: 121 ENDYARAGFEATLDVELPEGKSKIVSTNNSSYFNGMTTGPIDQFPHSMEPYLRQLGMPTC 180
Query: 151 LNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
L KG+V L +++ VC+ G L+PE A++L+L I +ATF++ L+ WSA+
Sbjct: 181 LKKGIVTLSTNYTVCKVGDKLTPEQAKVLKLFNIPLATFRVQLLSIWSAD 230
>gi|355757478|gb|EHH61003.1| hypothetical protein EGM_18916 [Macaca fascicularis]
Length = 239
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 133/230 (57%), Gaps = 13/230 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V+L+KT KG E K+ ++ +R V+ YK +++FS NMRN K K+ +
Sbjct: 1 MPKSKRHKKVSLTKTANKGLELKQNLMEELRKCVDTYKYLFIFSVANMRNSKLKDIQNAW 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR+ + GR P Y+VSK L G G TN KEEV F KY
Sbjct: 61 KHSRMFFGKNKAMMVAFGRSPSGEYKDNLYQVSKRLRGEMGFLFTNRTKEEVNEWFTKYT 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D R G+ AT V L GPLEQF H M+ LR+ G+P L +GVV L+SD+ VC+EG
Sbjct: 121 EMDNTRAGNKATFTVSLDPGPLEQFPHSMQSQLRQLGLPTTLKRGVVTLLSDYEVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAE--DFELYREGLDESDVESA 217
L+PE AR+L+L G +MA FK+ + W ++ F+ + L ES ESA
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDSQLGRFQQMGDDLPESASESA 230
>gi|384249317|gb|EIE22799.1| hypothetical protein COCSUDRAFT_66402 [Coccomyxa subellipsoidea
C-169]
Length = 243
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 137/223 (61%), Gaps = 17/223 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ- 59
MPKSKR++ V L+K KKK KE KE I+ S+RN V+ Y SIY+ +ENMRN KFKE RE+
Sbjct: 1 MPKSKRNKIVPLTKVKKKTKEWKEGIITSVRNFVDQYPSIYLIKYENMRNDKFKELREEK 60
Query: 60 IKPSRLLWVGRYPMRYSQAYK-----------VSKFLCGNTGLFLTNMPKEEVESLFNKY 108
+ SR +R + + +S + G+ GLF T +P ++V +LF ++
Sbjct: 61 LDTSRFCLASNKVLRVALGHDETDEYRKNLALLSDEITGSVGLFFTQLPHDQVLTLFEEF 120
Query: 109 EDYDFARTGSTATEKVELPEGPLE----QFTHEMEPFLRKQGMPVRLNKGVVELVSDFVV 164
E+ D+AR GS ATE EL GPL H +EP LRK G+P +LNKGVVELVSD V
Sbjct: 121 EELDYARAGSRATEDFELVAGPLNGPLGPLPHTVEPLLRKYGLPTKLNKGVVELVSDVTV 180
Query: 165 CEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYRE 207
C G L+P A +LR+ IKMA F+++ I W AED ++Y E
Sbjct: 181 CRAGDMLTPNQAALLRVFEIKMAAFRMYPIGHWHAED-QMYHE 222
>gi|348665976|gb|EGZ05804.1| hypothetical protein PHYSODRAFT_342006 [Phytophthora sojae]
Length = 255
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/214 (42%), Positives = 125/214 (58%), Gaps = 11/214 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR R L++ KKG E K+ +V++IRNAV+ Y+S YVFSF+NMR FKE R
Sbjct: 22 MPKSKRQRTKPLTQANKKGNELKQNVVDAIRNAVDTYESAYVFSFQNMRTNHFKEVRMDF 81
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR M+ + +++SK + GNTGL T+ P EEV F K
Sbjct: 82 KDSRFFLGKNKVMKLALGRSKEEEYAENLFRLSKDVSGNTGLLFTSKPHEEVAEYFAKLS 141
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
D+ R+G ATE V +PEGPL QF M LR G+PV L KGVV L ++ +C+ G+
Sbjct: 142 VRDYPRSGFVATETVTIPEGPLPQFIGSMLESLRGLGLPVDLKKGVVVLSRNYTICKPGQ 201
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFE 203
L+PE A++L KMA FKL ++ WS + ++
Sbjct: 202 TLTPEQAKLLVHFDRKMAEFKLVMLSVWSKDKYQ 235
>gi|350423400|ref|XP_003493470.1| PREDICTED: mRNA turnover protein 4 homolog [Bombus impatiens]
Length = 242
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 135/225 (60%), Gaps = 13/225 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L+KT KKG K+ IV +R+ VE Y I++ S NMRN K K+ R +
Sbjct: 1 MPKSKRDKKISLTKTNKKGLALKQQIVEDVRSCVEKYDRIFLLSVHNMRNNKLKDLRSEW 60
Query: 61 KPSRL---------LWVGRYPMRYSQA--YKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR L G+ P + +K+S L G GL TN K+EV +YE
Sbjct: 61 KDSRFFFGKNKVIALAFGKLPETEAAEGLHKLSLALRGQCGLLFTNRSKKEVLKWMEEYE 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D+AR+G A E + L EGP+ +F+H +EP R+ GMP L KGVV L+ D++VC+EG+
Sbjct: 121 EIDYARSGFVAQETIVLREGPMPEFSHSIEPHFRQLGMPTALQKGVVTLIKDYIVCKEGQ 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDV 214
L+PE ARIL+LL +ATFK + +S + Y+E + + DV
Sbjct: 181 TLNPEQARILKLLDKPLATFKFIPLGIFSKKHG--YKELISQHDV 223
>gi|395521753|ref|XP_003764980.1| PREDICTED: mRNA turnover protein 4 homolog [Sarcophilus harrisii]
Length = 240
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 129/212 (60%), Gaps = 13/212 (6%)
Query: 10 VTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLW-- 67
++L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R K SR+ +
Sbjct: 8 LSLTKTAKKGLELKQNLIGELRKCVDVYKYLFIFSVANMRNSKLKDIRNAWKHSRIFFGK 67
Query: 68 -------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGS 118
+GR P ++VSK L G GL TN K+EV F+KY + D+AR G+
Sbjct: 68 NKVMMVALGRGPADEYKDNLHQVSKKLRGEVGLLFTNRTKKEVNEWFSKYTEMDYARAGN 127
Query: 119 TATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARI 178
AT V L GPLEQF H MEP LR+ G+P L KGVV L+SD+ VC+EG L+PE AR+
Sbjct: 128 KATFTVGLDAGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYQVCKEGDVLTPEQARV 187
Query: 179 LRLLGIKMATFKLHLICRWSAED--FELYREG 208
L+L G +MA F++++ W AE FE EG
Sbjct: 188 LKLFGFEMAEFRVNIKYLWQAESGKFEHLGEG 219
>gi|109131259|ref|XP_001096594.1| PREDICTED: mRNA turnover protein 4 homolog [Macaca mulatta]
Length = 239
Score = 169 bits (428), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 132/230 (57%), Gaps = 13/230 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KG E K+ ++ +R V+ YK +++FS NMRN K K+ +
Sbjct: 1 MPKSKRDKKVSLTKTANKGLELKQNLMEELRKCVDTYKYLFIFSVANMRNSKLKDIQNAW 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR+ + GR P Y+VSK L G TN KEEV F KY
Sbjct: 61 KHSRMFFGKNKAMMVAFGRSPSGEYKDNLYQVSKRLRGEMSFLFTNRTKEEVNEWFTKYT 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D R G+ A V L GPLEQF H M+ LR+ G+P L +GVV L+SD+ VC+EG
Sbjct: 121 EMDNTRAGNKAAFTVSLDPGPLEQFPHSMQSQLRQLGLPTTLKRGVVTLLSDYEVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAE--DFELYREGLDESDVESA 217
L+PE AR+L+L G +MA FK+ + W ++ F+ + L ES ESA
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKHMWDSQLGRFQHMGDDLPESASESA 230
>gi|324523406|gb|ADY48244.1| MRNA turnover protein 4 [Ascaris suum]
Length = 219
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 93/210 (44%), Positives = 135/210 (64%), Gaps = 12/210 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR++ V+L+K KKK KE K+ +V IR++V+ Y +++VF+ +NMR KF E R++
Sbjct: 1 MPRSKREKEVSLTKVKKKTKESKKTLVKDIRDSVDTYANLFVFNVDNMRATKFVEVRQKF 60
Query: 61 KPSRLLWVGRYPMRY------------SQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + + G+ + +Q KVS L G GL TN KE V FN++
Sbjct: 61 KANSRFFFGKNNVMAVALGRDTNTEYANQLSKVSSMLKGQCGLMFTNADKEAVIKYFNEF 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
++ D+AR G ATE VELPEGPL QF+ MEP LRK G+P RL+KGV+ L S++V+C EG
Sbjct: 121 KESDYARGGQEATETVELPEGPLPQFSFSMEPQLRKLGLPTRLDKGVITLTSNYVICTEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWS 198
L+ E AR+L+LL K + FK++L+ W+
Sbjct: 181 GRLTAEQARLLKLLQYKTSIFKINLLAHWT 210
>gi|224080416|ref|XP_002190007.1| PREDICTED: mRNA turnover protein 4 homolog [Taeniopygia guttata]
Length = 233
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 128/207 (61%), Gaps = 13/207 (6%)
Query: 10 VTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLW-- 67
++L++T +KG E K+ ++ +R V+ YK I+VFS NMRN K K+ R K SR+ +
Sbjct: 5 LSLTRTPRKGLEAKQALIAELRRCVDTYKYIFVFSVANMRNSKLKDVRNAWKHSRIFFGK 64
Query: 68 -------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGS 118
+GR P +KVSK L G GL TN ++EV+ F+K+ + DFAR G+
Sbjct: 65 NKVMMVALGREPSSEYKENLHKVSKHLRGEVGLLFTNRTRDEVDEWFSKFRELDFARAGN 124
Query: 119 TATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARI 178
A V L GPLEQF H MEP LR+ G+P L KGVV L+SD+ VC+EG L+PE AR+
Sbjct: 125 RAPYGVSLDTGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGDVLTPEQARV 184
Query: 179 LRLLGIKMATFKLHLICRWSAE--DFE 203
L+L G +MA FK+ + W++E DF+
Sbjct: 185 LKLFGYEMAEFKVTMKFLWNSETGDFQ 211
>gi|405950097|gb|EKC18102.1| mRNA turnover protein 4-like protein [Crassostrea gigas]
Length = 335
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 125/210 (59%), Gaps = 11/210 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L++TKKKG E K+ I+ ++ + YK I++FS NMRN KE R+
Sbjct: 1 MPKSKRDKKVSLTQTKKKGLEFKQKIIEDVQTCCDKYKHIFLFSVHNMRNTHLKEVRQSW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
SR + M + +K+S L G +GL TN K+EV S F+ Y
Sbjct: 61 SGSRFYFGKNKVMALALGRTQEDEYKDNLHKLSNQLRGQSGLLFTNKSKKEVLSYFDNYR 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
DFAR+G+ + V L EGP+ +F+H MEP LR+ G+P L KGVV L+ + VCE+G
Sbjct: 121 VADFARSGNVCQQTVMLDEGPIPEFSHSMEPQLRQLGLPTCLQKGVVTLLKNHTVCEQGN 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSA 199
L+PE ARIL+L G KMA F + + WS+
Sbjct: 181 ILTPEQARILKLFGYKMAEFFVTIEGMWSS 210
>gi|345319424|ref|XP_001515818.2| PREDICTED: mRNA turnover protein 4 homolog [Ornithorhynchus
anatinus]
Length = 314
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 120/201 (59%), Gaps = 11/201 (5%)
Query: 11 TLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLW--- 67
+L+KT KKG E K+ ++ +R V+ YK +Y+FS NMRN K K+ R K SR+ +
Sbjct: 62 SLTKTAKKGLEVKQNLIGELRKCVDTYKYLYIFSVANMRNSKLKDIRSAWKHSRIFFGKN 121
Query: 68 ------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGST 119
+GR P Y+VSK L G GL TN K EV F +Y D+AR G+
Sbjct: 122 KVMMVALGRGPAEEYKDNLYQVSKRLKGEVGLLFTNRTKAEVNEWFRRYSKTDYARAGNR 181
Query: 120 ATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARIL 179
A V L GPL+QF H MEP LR+ G+P L KGVV L+SD+ VC+EG L+PE AR+L
Sbjct: 182 AAFTVRLDVGPLDQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGDVLNPEQARVL 241
Query: 180 RLLGIKMATFKLHLICRWSAE 200
+LLG +MA F++ + W AE
Sbjct: 242 KLLGFEMAEFRVTIKSVWHAE 262
>gi|119615280|gb|EAW94874.1| chromosome 1 open reading frame 33, isoform CRA_b [Homo sapiens]
Length = 425
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 126/215 (58%), Gaps = 17/215 (7%)
Query: 10 VTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLW-- 67
V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R K SR+ +
Sbjct: 196 VSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWKHSRMFFGK 255
Query: 68 -------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFAR 115
+GR P S YK VSK L G GL TN KEEV F KY + D+AR
Sbjct: 256 NKVMMVALGRSP---SDEYKDNLHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYAR 312
Query: 116 TGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPES 175
G+ A V L GPLEQF H MEP LR+ G+P L +GVV L+SD+ VC+EG L+PE
Sbjct: 313 AGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQ 372
Query: 176 ARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
AR+L+L G +MA FK+ + W ++ + G D
Sbjct: 373 ARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGDD 407
>gi|167515708|ref|XP_001742195.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778819|gb|EDQ92433.1| predicted protein [Monosiga brevicollis MX1]
Length = 216
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 125/213 (58%), Gaps = 11/213 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V+L++T KKG E K +V I+ ++ YK+ Y+FS +NMRN K K+ R
Sbjct: 1 MPKSKRAKVVSLTQTDKKGLETKTQLVEQIQQCLDEYKAAYIFSVDNMRNAKLKDVRLAW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
+ SR + M+ + + +S+ L GN G+ TN E+V S F +
Sbjct: 61 RNSRFFFGKNRVMQRAFGFSAQDEYKPNTHLISEHLKGNVGILFTNKKHEDVVSWFETFA 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D+AR+G+ AT+ V+L GPL +F H MEP LR G+P L +G+V L +D++VC +G
Sbjct: 121 ELDYARSGNPATDTVKLTAGPLTEFAHTMEPQLRALGLPTSLKRGIVTLDNDYLVCNKGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDF 202
LSPE ARIL+L MA FK+ L W +F
Sbjct: 181 SLSPEQARILKLFSKPMAEFKIKLTSAWRDGEF 213
>gi|157114505|ref|XP_001652303.1| mrna turnover protein 4 mrt4 [Aedes aegypti]
gi|108877246|gb|EAT41471.1| AAEL006887-PA [Aedes aegypti]
Length = 290
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 129/217 (59%), Gaps = 16/217 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT +KG +K+ I+ I+ + Y ++++FS +NMRN K K+ R
Sbjct: 1 MPKSKRDQKVSLTKTDRKGLSNKQQIIEDIQECRQKYDNVFLFSVQNMRNAKLKDVRTAW 60
Query: 61 KPSRLLWVGRYPMRYSQAY----------------KVSKFLCGNTGLFLTNMPKEEVESL 104
K SR + M+ + K+ + + G GL T+ KE V
Sbjct: 61 KNSRFFFGKNRVMQLGLKFVSDDADEDPKLEQDLEKLREQMIGQCGLLFTSESKETVLDW 120
Query: 105 FNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVV 164
F+ Y +FAR+G AT+ + L EGPLE+F+H +EP LR GMP +L +G+V L +F V
Sbjct: 121 FDSYSADEFARSGFRATKTIRLKEGPLEEFSHAIEPHLRSLGMPTKLERGIVTLYKEFTV 180
Query: 165 CEEGKPLSPESARILRLLGIKMATFKLHLICRWSAED 201
CE+GK L+PE ARIL+LLG MA FK+ + C ++ E+
Sbjct: 181 CEKGKVLTPEQARILKLLGKPMAKFKVIINCCYTKEN 217
>gi|383863221|ref|XP_003707080.1| PREDICTED: mRNA turnover protein 4 homolog [Megachile rotundata]
Length = 243
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 131/226 (57%), Gaps = 13/226 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L+KT KKG K+ IV +RN VE Y I++ S NMRN K K+ R +
Sbjct: 1 MPKSKRDKKISLTKTSKKGLALKQQIVEDVRNCVEKYVRIFLISVHNMRNNKLKDLRAEW 60
Query: 61 KPSRLLWVGRYPMRYSQA-----------YKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR + + + +K+S L G GL TN K EV +YE
Sbjct: 61 KDSRFFFGKNKVIALALGKSSKDEVTEGIHKLSAALKGQCGLLFTNRKKHEVLKWMEEYE 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D+AR+G E + LPEGP+ F H +EP LR+ GMP L KG+V L+ ++ VC+ G+
Sbjct: 121 EADYARSGFVVQETITLPEGPMPDFPHSIEPHLRQLGMPTALQKGIVTLIKEYTVCKSGQ 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVE 215
L+PE ARIL+LL +ATFK+ + +S + Y++ + E DV+
Sbjct: 181 TLTPEQARILKLLDKPLATFKMIPLGVFSKKHG--YKKLVSEDDVK 224
>gi|158285279|ref|XP_308224.3| AGAP007644-PA [Anopheles gambiae str. PEST]
gi|157019915|gb|EAA04106.4| AGAP007644-PA [Anopheles gambiae str. PEST]
Length = 293
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 134/218 (61%), Gaps = 17/218 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT +KG +K+ I+ I+ E Y +I++FS +NMRN K K+ R +
Sbjct: 1 MPKSKRDKKVSLTKTDRKGLSNKQQIIEDIQQCREKYDNIFLFSVQNMRNSKLKDVRAEW 60
Query: 61 KPSR-------LLWVG---------RYPMRYSQAY-KVSKFLCGNTGLFLTNMPKEEVES 103
K SR ++ +G P + Q ++ + + G GL T+ K+ V
Sbjct: 61 KNSRFFFGKNRVMQLGLKLISDDENSEPTKLEQGMEQLREQMIGQCGLLFTSESKKTVLE 120
Query: 104 LFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFV 163
F+ Y+ +FAR G AT+ V+L GPLE+F+H +EP LR GMP +L++G+V L +F
Sbjct: 121 WFDTYQAEEFARGGFRATKTVKLKPGPLEEFSHAIEPHLRSLGMPTKLDRGIVTLYKEFT 180
Query: 164 VCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAED 201
VCE+GK L+PE ARIL+LL MATFKL + C ++ +D
Sbjct: 181 VCEKGKVLTPEQARILKLLNKPMATFKLIINCCYTKKD 218
>gi|321463281|gb|EFX74298.1| hypothetical protein DAPPUDRAFT_307342 [Daphnia pulex]
Length = 240
Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 130/212 (61%), Gaps = 11/212 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPK+KR + ++L++TKKKG K+ +V IR+ VE Y +Y+FS +NMR+ K K R +
Sbjct: 1 MPKTKRFQKISLTQTKKKGLGGKQQLVEDIRSCVEKYSYLYLFSVQNMRSNKLKSIRNEW 60
Query: 61 KPSRL---------LWVGRYPMRYSQA--YKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR + +GR S+ ++VSK L G G+ T+ PK EV F K+
Sbjct: 61 KDSRFFLGKNRVIAIALGRTKESESRENLHEVSKRLKGQCGIVFTDKPKSEVIRYFQKHV 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D+AR+G+ ATE V L GPLEQF MEP+LR+ G+P L +GVV L+ + VC+EG
Sbjct: 121 ESDYARSGNVATETVTLQPGPLEQFPFNMEPYLRQLGLPTSLQRGVVTLLKEHTVCKEGS 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAED 201
L+PE AR+L+LL MA F++ + W ED
Sbjct: 181 ILTPEEARLLKLLCKHMAEFRVTIEAVWEKED 212
>gi|328786487|ref|XP_393683.3| PREDICTED: mRNA turnover protein 4 homolog [Apis mellifera]
Length = 243
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 121/202 (59%), Gaps = 11/202 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L+KT KKG K+ IV +RN VE Y I++ S NMRN K K+ R +
Sbjct: 1 MPKSKRDKKISLTKTSKKGLALKQQIVEDVRNCVEKYARIFLLSVHNMRNNKLKDLRSEW 60
Query: 61 KPSRL---------LWVGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR L +G+ +K+S L G GL TN K+EV +YE
Sbjct: 61 KDSRFFFGKNKVIALALGKSSENEVAENLHKLSLALRGQCGLLFTNRSKKEVLKWMREYE 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D+AR+G E + L EGP+ F+H +EP LR+ GMP L KGVV L+ ++ VC+ G+
Sbjct: 121 EIDYARSGFITQETITLSEGPIPDFSHSIEPHLRQLGMPTALQKGVVTLIKEYTVCKMGQ 180
Query: 170 PLSPESARILRLLGIKMATFKL 191
L+PE ARIL+LL +ATFKL
Sbjct: 181 ALTPEQARILKLLDKPLATFKL 202
>gi|355704929|gb|EHH30854.1| hypothetical protein EGK_20651 [Macaca mulatta]
Length = 239
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 123/211 (58%), Gaps = 11/211 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KG E K+ ++ +R V+ YK +++FS NMRN K K+ +
Sbjct: 1 MPKSKRDKKVSLTKTANKGLELKQNLMEELRKCVDTYKYLFIFSVANMRNSKLKDIQNAW 60
Query: 61 KPSRLLW---------VGRYPM--RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR+ + GR P Y+VSK L G TN KEEV F KY
Sbjct: 61 KHSRMFFGKNKAMMVAFGRSPSGEYKDNLYQVSKRLRGEMSFLFTNRTKEEVNEWFTKYT 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D R G+ A V L GPLEQF H M+ LR+ G+P L +GVV L+SD+ VC+EG
Sbjct: 121 EMDNTRAGNKAAFTVSLDPGPLEQFPHSMQSQLRQLGLPTTLKRGVVTLLSDYEVCKEGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAE 200
L+PE AR+L+L G +MA FK+ + W ++
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKHMWDSQ 211
>gi|71657243|ref|XP_817140.1| 60S acidic ribosomal protein [Trypanosoma cruzi strain CL Brener]
gi|70882312|gb|EAN95289.1| 60S acidic ribosomal protein, putative [Trypanosoma cruzi]
Length = 229
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 125/210 (59%), Gaps = 12/210 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V L+KT+ K +E K+ ++N IR A+++Y +Y F+ N+R ++ RE+
Sbjct: 1 MPKSKRAKIVPLTKTRAKTREDKDKLINRIRKALDDYTDVYSFTLSNVRTNILQQIREER 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K L++G + + +K+ KFL G+ GL TN+PK+EV+S F
Sbjct: 61 KGDSCLFLGNNKLIMIALGRDEESSQRPNLHKLCKFLVGSCGLLFTNLPKKEVKSYFASV 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
+ARTG TAT + L GPL QFTH M L K G+P++L+KGV+ L+ D VCE
Sbjct: 121 GAQVYARTGQTATSSLVLRAGPLPQFTHSMFDHLSKLGLPLKLDKGVIVLLQDTTVCEAN 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWS 198
LS E+A++L+L GI+ A F++ L W+
Sbjct: 181 DTLSAEAAQLLKLFGIQSAEFRIDLTAHWA 210
>gi|407849420|gb|EKG04162.1| 60S acidic ribosomal protein P0 [Trypanosoma cruzi]
Length = 229
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 125/210 (59%), Gaps = 12/210 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V L+KT+ K +E K+ ++N IR A+++Y +Y F+ N+R ++ RE+
Sbjct: 1 MPKSKRAKIVPLTKTRAKTREDKDKLINRIRKALDDYTDVYSFTLSNVRTNILQQIREER 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K L++G + + +K+ KFL G+ GL TN+PK+EV+S F
Sbjct: 61 KGDSCLFLGNNKLIMIALGRDEESSQRPNLHKLCKFLVGSCGLLFTNLPKKEVKSYFASV 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
+ARTG TAT + L GPL QFTH M L K G+P++L+KGV+ L+ D VCE
Sbjct: 121 GAQVYARTGQTATSSLVLRAGPLPQFTHSMFDHLSKLGLPLKLDKGVIVLLQDTTVCEAN 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWS 198
LS E+A++L+L GI+ A F++ L W+
Sbjct: 181 DTLSAEAAQLLKLFGIQSAEFRIDLTAHWA 210
>gi|268562559|ref|XP_002646691.1| Hypothetical protein CBG13068 [Caenorhabditis briggsae]
Length = 220
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 132/213 (61%), Gaps = 12/213 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
M +S+RD+ V+L+K KKK K+ K +VN +R +V+ YK++++F+ NMR+ +F R++
Sbjct: 1 MARSRRDKNVSLTKVKKKTKDTKNSLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKY 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K S + G+ + +Q +K S L G GL TNM K+EVE+ F K
Sbjct: 61 KESSRFFFGKNNVIAIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVETEFAKI 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
+ D+AR G ATE V LPEGP+ QF MEP LRK G+P +L+KG++ L +F VC+EG
Sbjct: 121 SEEDYARVGDLATETVVLPEGPIAQFAFSMEPQLRKLGLPTKLDKGIITLYQEFEVCKEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAED 201
+PL+ E A+IL+ IKMA F+L W+ +D
Sbjct: 181 QPLTVEQAKILKHFEIKMAQFRLIFKAMWNKKD 213
>gi|301090347|ref|XP_002895392.1| mRNA turnover protein 4 [Phytophthora infestans T30-4]
gi|262099013|gb|EEY57065.1| mRNA turnover protein 4 [Phytophthora infestans T30-4]
Length = 234
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 121/214 (56%), Gaps = 11/214 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKS+R R L++ KKG E K+ +V+ IRNAV+ Y S YVFSF+NMR FKE R
Sbjct: 1 MPKSRRQRTKPLTQANKKGNELKQNVVDVIRNAVDTYDSAYVFSFQNMRTNHFKEVRMDF 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR M+ + Y++SK + GNTGL T+ P +EV F K
Sbjct: 61 KDSRFFLGKNKVMKLALGRSKEEEYAENLYRLSKDVSGNTGLLFTSKPHDEVVDYFAKLS 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
D R+G ATE V +PEGPL QF M LR G+P+ L GVV L ++ +C+ G+
Sbjct: 121 VSDHPRSGFVATETVTIPEGPLPQFIGSMLESLRGLGLPIDLKNGVVVLNQNYTICKTGQ 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFE 203
L+PE A++L KMA FKL ++ WS + ++
Sbjct: 181 TLTPEQAKLLVHFDRKMAEFKLVVLSVWSKDKYQ 214
>gi|414586605|tpg|DAA37176.1| TPA: hypothetical protein ZEAMMB73_064685 [Zea mays]
Length = 115
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 75/113 (66%), Positives = 96/113 (84%), Gaps = 2/113 (1%)
Query: 66 LWVGRYPMRYSQA--YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEK 123
+ +GR P ++ +K+SKFL GN+GLF TN+P+++VE +F ++E++DFARTG TA +
Sbjct: 3 IALGRPPADEAETGLHKLSKFLQGNSGLFFTNLPRDDVERMFREFEEHDFARTGCTAADT 62
Query: 124 VELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESA 176
VEL EGPLEQFTHEMEPFLRKQG+PVRLNKGVVELV+D VVCEEGKPL+PE+A
Sbjct: 63 VELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVVELVADHVVCEEGKPLAPEAA 115
>gi|308502548|ref|XP_003113458.1| hypothetical protein CRE_26450 [Caenorhabditis remanei]
gi|308263417|gb|EFP07370.1| hypothetical protein CRE_26450 [Caenorhabditis remanei]
Length = 220
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 133/213 (62%), Gaps = 12/213 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
M +S+RD+ V+L+K KKK K+ K +VN +R +V+ YK++++F+ NMR+ +F R++
Sbjct: 1 MARSRRDKNVSLTKVKKKTKDTKNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKY 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K S + G+ + +Q +K S L G GL TNM ++EV++ F++
Sbjct: 61 KESSRFFFGKNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSQKEVKAEFDQI 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
+ D+AR G TATE V LPEGP+ QF MEP LRK G+P +L+KGV+ L F VC+EG
Sbjct: 121 TEEDYARVGDTATETVVLPEGPIAQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCKEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAED 201
+PL+ E A+IL+ IKMA F+L W+ +D
Sbjct: 181 EPLTVEQAKILKHFEIKMAQFRLIFKAMWNKKD 213
>gi|340057598|emb|CCC51944.1| putative 60S acidic ribosomal protein [Trypanosoma vivax Y486]
Length = 224
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 123/210 (58%), Gaps = 12/210 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR V L+KT+ K +E K+ ++N IR+A+E+Y +Y F N+R + RE+
Sbjct: 1 MPKSKRAVIVPLTKTRSKTREEKDGLINKIRDALEDYTDVYAFELFNIRTSILQRIREER 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
+ L++G + + YK+SK+L G+ GL TN+PK+EVE F
Sbjct: 61 REDSRLFLGNNKLLMIALGRDQESSQRPNLYKLSKYLTGSCGLLFTNLPKKEVEKYFASV 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
+ARTG AT + L GPL QF+H M L K G+P++L+KGV+ L+ D VCE G
Sbjct: 121 SAPVYARTGQEATTSLLLRAGPLPQFSHSMFDHLSKLGLPIKLDKGVIVLLRDTTVCEPG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWS 198
LS E+A++L+L G++ FKL L RWS
Sbjct: 181 DTLSAEAAQLLKLFGVQCTEFKLLLNARWS 210
>gi|407404046|gb|EKF29692.1| 60S acidic ribosomal protein P0 [Trypanosoma cruzi marinkellei]
Length = 229
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 123/209 (58%), Gaps = 12/209 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V L+KT+ K +E K+ ++N IR A+++Y +Y F+ N+R ++ RE+
Sbjct: 1 MPKSKRAKIVPLTKTRAKTREDKDKLINRIRKALDDYTDVYSFTLSNVRTNILQQIREER 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K L++G + + +K+ KFL G+ GL TN+PK+EV+S F
Sbjct: 61 KGDSCLFLGNNKLIMIALGRDEESSQRPNLHKLCKFLVGSCGLLFTNLPKKEVKSYFASV 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
+ARTG TAT + L GPL QF H M L K G+P++L+KGV+ L+ D VCE
Sbjct: 121 GAQVYARTGQTATRSLVLRAGPLPQFPHSMFDHLSKLGLPLKLDKGVIVLLQDTTVCEPN 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRW 197
LS E+A++LRL GI+ A F++ L W
Sbjct: 181 DSLSAEAAQLLRLFGIQSAEFRIDLTAHW 209
>gi|145355177|ref|XP_001421843.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582082|gb|ABP00137.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 255
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 131/222 (59%), Gaps = 17/222 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V+L++TKKK +E K ++ +R+A+ S+YVF +ENMRN FKE R
Sbjct: 1 MPKSKRAKVVSLTQTKKKDREWKSTLIERVRDALSERSSVYVFKYENMRNGTFKEMRAAT 60
Query: 61 KPSRLLWVGRYP-MRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
+ + +VG +R + A + + G+ G+ TN+ +E+VES+F ++
Sbjct: 61 EATTTFFVGSNKVLRVALGRDAESEASEGAATLGARVKGDCGVMFTNLSREDVESVFERF 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQ-----FTHEMEPFLRKQGMPVRLNKGVVELVSDFV 163
D+ARTG+ A E V + GP+ H +EP LRK GMP +LN+GV+EL ++
Sbjct: 121 AVKDYARTGALARETVTVEAGPVHGPSGALMEHTLEPTLRKNGMPTKLNRGVIELEANHT 180
Query: 164 VCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELY 205
+C+EG+ +SP+ A +LRL G ++A F+ L C + E+Y
Sbjct: 181 LCKEGQHISPQGAILLRLFGHELAEFRCRLTCGLVNGELEVY 222
>gi|308813045|ref|XP_003083829.1| Protein involved in mRNA turnover (ISS) [Ostreococcus tauri]
gi|116055711|emb|CAL57796.1| Protein involved in mRNA turnover (ISS) [Ostreococcus tauri]
Length = 254
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 131/222 (59%), Gaps = 17/222 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR R V+L+KTKKK +E K I++ R+A+E S YVF + MRN FKE R+
Sbjct: 1 MPKSKRARVVSLTKTKKKDREWKSSIIDRARDALELRASAYVFKYTCMRNGTFKEMRQAC 60
Query: 61 KPSRLLWVGRYP-MRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
+ + +VG +R + A ++ K + G+ G+ T++ KE+VE+ F+++
Sbjct: 61 EETTTFFVGSNAVLRVALGKDSESESKENASELGKRVRGDCGVMFTDLSKEDVEATFDRF 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQ-----FTHEMEPFLRKQGMPVRLNKGVVELVSDFV 163
D+ARTG A E V +P GP+ H +EP LRK GMP RLN+GV+EL +D V
Sbjct: 121 AVSDYARTGQVAGETVTVPAGPVRGPSGALMEHTLEPTLRKNGMPTRLNRGVIELEADHV 180
Query: 164 VCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELY 205
+C +G+ +SP+ A +L++ G ++A F+ L+ E+Y
Sbjct: 181 LCRQGQHISPQGAILLKMFGHELAEFRCRLVAGLVDGKVEVY 222
>gi|281343024|gb|EFB18608.1| hypothetical protein PANDA_003700 [Ailuropoda melanoleuca]
Length = 213
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 114/196 (58%), Gaps = 11/196 (5%)
Query: 26 IVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLW---------VGRYPMR-- 74
IV+ +R V+ YK +++FS NMRN K K+ R K SR+ + +GR P
Sbjct: 1 IVSQLRKCVDTYKYLFIFSVANMRNSKLKDIRNAWKHSRMFFGKNKVMMVALGRSPADEY 60
Query: 75 YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQF 134
++VSK L G GL TN KEEV F KY + DFAR G+ AT V L GPLEQF
Sbjct: 61 KDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYTEMDFARAGNKATFTVTLDPGPLEQF 120
Query: 135 THEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
H MEP LR+ G+P L +GVV L+SD VC+EG L+PE AR+L+L G +MA FK+ +
Sbjct: 121 PHSMEPQLRQLGLPTALKRGVVTLLSDHEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIK 180
Query: 195 CRWSAEDFELYREGLD 210
W A+ + G D
Sbjct: 181 YMWDAQSGRFQQMGDD 196
>gi|300123866|emb|CBK25137.2| unnamed protein product [Blastocystis hominis]
Length = 215
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 126/216 (58%), Gaps = 12/216 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR V+L++TK+KGKEHK+ +VN++R V+NYK +YV F+N+R FK+ R Q+
Sbjct: 1 MPRSKRAHVVSLTQTKQKGKEHKDNVVNTVRECVDNYKFVYVLEFDNLRTNAFKDLRLQL 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
R L +GR P K+ ++L GN LF TN P+EEV S F +Y+
Sbjct: 61 NDCRFLLGKNRVMQVALGRSPEEEYRDNLSKLGEYLGGNCTLFFTNRPQEEVLSFFKEYK 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
D+AR G ATE+ +P+G + F H M RK +PV + G + + D+ VC++GK
Sbjct: 121 SLDYARAGFKATEEFVIPKGEMP-FAHSMMEEFRKLRLPVEMKNGTIHMREDYTVCKKGK 179
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFELY 205
L+PE RIL+L MA F L WS + +++
Sbjct: 180 VLTPEQCRILKLYSKPMAYFVLTPRACWSNGELQVF 215
>gi|159476968|ref|XP_001696583.1| predicted protein [Chlamydomonas reinhardtii]
gi|158282808|gb|EDP08560.1| predicted protein [Chlamydomonas reinhardtii]
Length = 223
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 130/224 (58%), Gaps = 18/224 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR++ V+L+K KKK ++ KE ++ IR +++ Y ++YVF + NMRN FK+ RE +
Sbjct: 1 MPKSKRNKVVSLTKVKKKDRQWKEGLLEKIRQSLDTYPTVYVFKYYNMRNESFKQLREDL 60
Query: 61 KPSRLLWVG-----RYPMRYSQA--YK-----VSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K S +G + + S+A YK + + + G GLF T +P E+V+ F Y
Sbjct: 61 KDSSRFVLGSTALMQVALGKSEADEYKAGLSGLGEHIKGTVGLFFTKLPHEQVKEHFEAY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQ----FTHEMEPFLRKQGMPVRLNKGVVELVSDFVV 164
D+AR G+ A L EGPL H +EP LRK G+P +LNKGVVEL+ D V
Sbjct: 121 VHEDYARAGAKAAHDFSLTEGPLSGPMGPLPHTLEPQLRKFGLPTKLNKGVVELLKDHTV 180
Query: 165 CEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREG 208
C EG+ L A ILR+ IKMA KL L+ W + + E R+G
Sbjct: 181 CREGQKLDAAQAGILRVFDIKMAECKLKLLAVWRSGEEE--RQG 222
>gi|342184577|emb|CCC94059.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 224
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 123/210 (58%), Gaps = 12/210 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR V L+KT+ K +E K+ ++N IR+A+E+Y +Y N+R ++ R++
Sbjct: 1 MPKSKRSTVVPLTKTRSKTREEKDELINKIRDALEDYTDVYTLQLYNIRTKNLQQIRDER 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
+ L++G + + + YK+ K+L G+ GLF TN+P +EV+ F +
Sbjct: 61 RGDSRLFLGNNKILMFALGRDEASSQRTNLYKLGKYLTGSCGLFFTNLPAKEVKKYFEEV 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
+ARTG AT + L GPL QF H M L + G+P++L KGV+ L+ D VCE G
Sbjct: 121 TAEVYARTGQVATCSLPLRAGPLTQFPHSMFDHLSRLGLPIKLEKGVIVLLRDTTVCEVG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWS 198
+ LS E+A++L+L GI+ A FK+ L W+
Sbjct: 181 ETLSAEAAQLLKLYGIQSAEFKVELTAHWA 210
>gi|428180589|gb|EKX49456.1| hypothetical protein GUITHDRAFT_151550 [Guillardia theta CCMP2712]
Length = 216
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 120/208 (57%), Gaps = 12/208 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP SKR + ++L+K KK G++HKE +V +I ++ Y +Y S ENMR K+ R++
Sbjct: 1 MPSSKRQKLISLTKVKKAGRKHKESLVETIHECLDKYSHVYALSLENMRTSLLKDLRQKF 60
Query: 61 KPSRL---------LWVGRYPMRYSQA--YKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
R L +GR P ++ ++V++ L G T LF ++ P+ E+ S F+KY+
Sbjct: 61 AEDRFVMGKQNVMALALGRSPEEETKENLHQVTQHLNGTTALFFSSRPQTEITSFFDKYQ 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ DFA+ G ATE E+ GPL F H M LRK G+PV L G V D VC++G
Sbjct: 121 ESDFAKGGVEATEDYEIQAGPLP-FQHTMVEPLRKLGLPVMLKNGTVMCEKDHTVCKKGV 179
Query: 170 PLSPESARILRLLGIKMATFKLHLICRW 197
L+PE A++L+LLG K A FK L C W
Sbjct: 180 VLTPEQAQVLKLLGEKQAIFKPELKCVW 207
>gi|393242959|gb|EJD50475.1| hypothetical protein AURDEDRAFT_112140 [Auricularia delicata
TFB-10046 SS5]
Length = 250
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 136/244 (55%), Gaps = 28/244 (11%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SK+ + V+L+K +K +E+K + ++ + +K YVF NMRN K+ R +
Sbjct: 1 MPRSKKAKVVSLTKVDRKTRENKANHITILQECADKWKYCYVFQVANMRNTYLKDIRVRW 60
Query: 61 KPSRLLWVGRY-----PMRYSQA-------YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + ++ GR + ++A K++K L G G+F T+ E E+ F Y
Sbjct: 61 KDTGRMFFGRNTVVVKALGATEAEEHKPGLSKLNKHLSGTVGVFFTDHDPAETEAWFAHY 120
Query: 109 EDYDFARTGSTATEKVELPEGPL--------EQFTHEMEPFLRKQGMPVRLNKGVVELVS 160
D+AR G+ AT VELP GP+ EQF H MEP LR+ G+ RL +GV L +
Sbjct: 121 TQADYARAGNRATRAVELPAGPIMNRESDPPEQFQHTMEPQLRRLGLATRLERGVPTLAA 180
Query: 161 DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE--------DFELYREGLDES 212
VVC++G L+ E A+IL+L+G ++ATF++ L+CRWSA+ + E G D++
Sbjct: 181 PHVVCKQGDVLTAEQAQILKLIGERLATFRVRLLCRWSADTGAVVELAEPEPVEAGQDDA 240
Query: 213 DVES 216
+VE
Sbjct: 241 EVED 244
>gi|71748336|ref|XP_823223.1| 60S acidic ribosomal protein [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70832891|gb|EAN78395.1| 60S acidic ribosomal protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261333131|emb|CBH16126.1| 60S acidic ribosomal protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 226
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 122/210 (58%), Gaps = 12/210 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR V L+KT+ K +E K+ ++N IR+A+++Y +Y F N+R ++ RE+
Sbjct: 1 MPKSKRATIVPLTKTRSKTREEKDELINKIRDALDDYTDVYTFELSNIRTNILQQIREER 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
+ L++G + + +K+SK+L G+ GL TN+P ++V+ F
Sbjct: 61 RNDSRLFLGNNKLLMIALGRDDSSSQRPNLHKLSKYLTGSCGLLFTNLPHQDVKEYFKGV 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
FARTG AT + L GPL QF H M L + G+P++L+KGV+ L+ D VCE G
Sbjct: 121 SADVFARTGQVATCPLLLRTGPLAQFPHSMFDHLSRLGLPIKLDKGVIVLLRDTTVCEVG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWS 198
L+ E+A++L+L GI+ A FKL L W+
Sbjct: 181 DTLTAEAAQLLKLFGIQSAEFKLELTAHWA 210
>gi|193690918|ref|XP_001952134.1| PREDICTED: mRNA turnover protein 4 homolog [Acyrthosiphon pisum]
Length = 221
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 129/223 (57%), Gaps = 14/223 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L+KT K G + K+ ++ ++R AV Y+ I+VF +NMRN K K+ R +
Sbjct: 1 MPKSKRDKKISLTKTTKLGSKLKQSVMENLREAVNKYEHIFVFHTDNMRNGKLKDVRNEW 60
Query: 61 KPSRLLWVGRYPMRY-----------SQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR + M Y + +K++ + G GL TN P ++V F+ Y
Sbjct: 61 KDSRFFFGKNKVMSYALGKSAQDEIQTNLHKLALQIEGQCGLLFTNRPVDDVIEWFDNYS 120
Query: 110 DYDFARTGSTATEKVELPEGPL-EQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
+ +F R G A V L EGPL + F H MEP LR+ G+P L +GV++++ +C+EG
Sbjct: 121 EPEFPRAGIRAAYTVTLDEGPLPDTFIHSMEPSLRQLGLPTTLQRGVIQVLKSHTICKEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDE 211
++PE +R+L+L G KMA FK+ L WS + +R LDE
Sbjct: 181 SVITPEQSRLLKLFGHKMAEFKIVLRYVWSKDG--QFRPLLDE 221
>gi|307186412|gb|EFN72046.1| mRNA turnover protein 4-like protein [Camponotus floridanus]
Length = 244
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 122/210 (58%), Gaps = 16/210 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG K+ I+ ++ VE+Y I++ S +N RN K E R +
Sbjct: 1 MPKSKRDKKVSLTKTNKKGLVLKQRIIEDVKKCVEDYNRIFLISVQNTRNTKLLELRTEW 60
Query: 61 KPSRLLW-------VGRYPMRYSQ-AYKVSKF--------LCGNTGLFLTNMPKEEVESL 104
SRL + +G R ++ A + K + G GL TN K+EV
Sbjct: 61 NDSRLFFGKLRIIALGLGKTRETEVADGIHKLANAIKNHSMKGQCGLLFTNRSKKEVIEW 120
Query: 105 FNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVV 164
KYE+ ++AR+G E +ELPEGPL QF H MEP LR+ GMP L KG++ L+ F V
Sbjct: 121 AEKYEEMEYARSGFVTPETIELPEGPLPQFQHSMEPQLRQLGMPTSLQKGIITLIKPFRV 180
Query: 165 CEEGKPLSPESARILRLLGIKMATFKLHLI 194
C++ L+PE A+IL+LL +A FKL L+
Sbjct: 181 CQKNDVLTPEQAQILKLLDKPLAVFKLLLL 210
>gi|239790005|dbj|BAH71592.1| ACYPI009021 [Acyrthosiphon pisum]
Length = 221
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 124/212 (58%), Gaps = 12/212 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L+KT K G + K+ ++ ++R AV Y+ I+VF +NMRN K K+ R +
Sbjct: 1 MPKSKRDKKISLTKTTKLGSKLKQSVMENLREAVNKYEHIFVFHTDNMRNGKLKDVRNEW 60
Query: 61 KPSRLLWVGRYPMRY-----------SQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR + M Y + +K++ + G GL TN P ++V F+ Y
Sbjct: 61 KDSRFFFGKNKVMSYALGKSAQDEIQTNLHKLALQIEGQCGLLFTNRPVDDVIEWFDNYS 120
Query: 110 DYDFARTGSTATEKVELPEGPL-EQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
+ +F R G A V L EGPL + F H MEP LR+ G+P L +GV++++ +C+EG
Sbjct: 121 EPEFPRAGIRAAYTVTLDEGPLPDTFIHSMEPSLRQLGLPTTLQRGVIQVLKSHTICKEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAE 200
++PE +R+L+L G KMA FK+ L WS +
Sbjct: 181 SVITPEQSRLLKLFGHKMAEFKIVLRYVWSKD 212
>gi|388582743|gb|EIM23047.1| mRNA turnover protein 4-like protein, partial [Wallemia sebi CBS
633.66]
Length = 215
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 125/215 (58%), Gaps = 18/215 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKS+R++ V+L++T+KK +EHKE +V+ IR A + K ++ +MRN K+ R
Sbjct: 1 MPKSRRNKLVSLTETEKKTREHKEALVDLIRQAADENKYCWIIEAGDMRNSSLKDVRAAW 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + L+ GR + + YK+S+ L G+ GLF TN + EV+ F+ +
Sbjct: 61 KGTGRLFFGRLKVMAIALGTTPETSHKPELYKLSEHLSGSAGLFFTNWDENEVKEWFDSF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL------EQFTHEMEPFLRKQGMPVRLNKGVVELVSDF 162
DFARTG+ AT+ +EL EGP+ + H +EP LRK G+ L KGV L+S
Sbjct: 121 SKPDFARTGNVATQTIELEEGPIIHRPSGDTLPHTLEPSLRKLGLSTSLLKGVPTLLSAH 180
Query: 163 VVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
VC+EG+ LS E A+I++ LG+ M+ FKL + W
Sbjct: 181 TVCKEGQTLSAEQAQIIKHLGVMMSNFKLQVKALW 215
>gi|17533073|ref|NP_495470.1| Protein F10E7.5 [Caenorhabditis elegans]
gi|351061392|emb|CCD69167.1| Protein F10E7.5 [Caenorhabditis elegans]
Length = 220
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 132/213 (61%), Gaps = 12/213 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
M +S+RD+ V+L+K KKK K+ K +VN +R +V+ YK++++F+ NMR+ +F R++
Sbjct: 1 MARSRRDKNVSLTKVKKKTKDTKNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKY 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + + G+ + +Q +K S L G GL TNM K+EVE+ F++
Sbjct: 61 KENSRFFFGKNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEA 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
+ D+AR G ATE V LPEGP+ QF MEP LRK G+P +L+KGV+ L F VC+EG
Sbjct: 121 SEEDYARVGDVATETVVLPEGPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCKEG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAED 201
+PL+ E A+IL+ +KM+ F+L W+ +D
Sbjct: 181 EPLTVEQAKILKHFEVKMSQFRLIFKAHWNKKD 213
>gi|157877464|ref|XP_001687049.1| putative 60S acidic ribosomal protein [Leishmania major strain
Friedlin]
gi|68130124|emb|CAJ09434.1| putative 60S acidic ribosomal protein [Leishmania major strain
Friedlin]
Length = 227
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 121/211 (57%), Gaps = 12/211 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V L+KT+ K +E K+ ++ IR A+E+Y +Y F N+R ++ RE+
Sbjct: 1 MPKSKRAKIVPLTKTQAKTREDKDKLIERIREALEDYSDVYTFQLHNIRTNILQQIREER 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
+++G + + +K+S FL G GL TN+ K+EV+ F
Sbjct: 61 AGDSRIFLGNNKVMMIAIGRDEESAQRQNLHKLSPFLTGLCGLLFTNLSKKEVKEYFATV 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
+ARTG TATE + L GPL QF H M L K G+P++L++GV+ L+ D VCE G
Sbjct: 121 GAPVYARTGQTATESLVLKGGPLPQFPHSMFDHLAKLGLPIKLDRGVIVLLQDTTVCEPG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSA 199
LS E+A++L+L G++ A FK+ L W++
Sbjct: 181 DTLSAEAAQLLKLFGVQSAKFKMDLTAHWTS 211
>gi|170577276|ref|XP_001893949.1| ribosomal protein L10 domain containing protein [Brugia malayi]
gi|158599729|gb|EDP37214.1| ribosomal protein L10 domain containing protein [Brugia malayi]
Length = 219
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 123/210 (58%), Gaps = 12/210 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR+ V+L++ KKK KE K +VN IR V+ Y +++F ENMR+ KF E R++
Sbjct: 1 MPKSKREVDVSLTRVKKKTKEKKIKLVNEIRKCVDTYDHLFLFKIENMRSTKFIEIRQKY 60
Query: 61 KPSRLLWVGRYPM-------RYSQAY-----KVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + + G+ + S Y K+S L G GL TN + V+ F++
Sbjct: 61 KNNSHFFYGKNNVMAIALGKTSSTEYARELNKISGLLKGECGLMFTNDDHDSVKKYFDEL 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
DFAR G TA VEL EGPL QF +EP LRK G+P +L KG+V L+S +VVC++G
Sbjct: 121 YMSDFARCGQTAISTVELCEGPLTQFPFSLEPQLRKLGLPTKLEKGIVTLISHYVVCKDG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWS 198
L+ + R+L+LLG KM+TF + L W
Sbjct: 181 DKLTADQCRLLKLLGYKMSTFHVKLSAHWC 210
>gi|154346340|ref|XP_001569107.1| putative 60S acidic ribosomal protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066449|emb|CAM44242.1| putative 60S acidic ribosomal protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 227
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 123/210 (58%), Gaps = 12/210 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ- 59
MPKSKR + V+L+KT+ K + K+ ++ IR A+E+Y +Y F N+R + RE+
Sbjct: 1 MPKSKRAKIVSLTKTQAKTRADKDKLIERIRQALEDYTDVYTFQLHNIRTNILQLIREER 60
Query: 60 IKPSR---------LLWVGR--YPMRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
+ SR ++ +GR + +K+S FL G GLF TN+ K+EV+ F
Sbjct: 61 AEDSRIFLGNNKLMMIAIGRDEKSAQKENLHKLSPFLTGLCGLFFTNLSKKEVKEYFATV 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
+ARTG TATE + L GPL QF H M L K G+P++L++GV+ L+ D VCE G
Sbjct: 121 GAPVYARTGQTATESLLLKAGPLPQFPHSMFDHLAKLGLPIKLDRGVIVLLQDTTVCEPG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWS 198
LS E+A++L+L G++ A FK+ L W+
Sbjct: 181 DTLSAEAAQLLKLFGVECAEFKIDLTAHWT 210
>gi|242017680|ref|XP_002429315.1| ribosomal P0 protein, putative [Pediculus humanus corporis]
gi|212514218|gb|EEB16577.1| ribosomal P0 protein, putative [Pediculus humanus corporis]
Length = 234
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 128/231 (55%), Gaps = 15/231 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L++TKKKG K+ +V IR + Y S+Y+F +NMRN+ KE R +
Sbjct: 1 MPKSKRDQKISLTQTKKKGLSFKQNLVAEIRENLTKYDSLYLFYVKNMRNIALKEVRAEW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR + M + +K++K + G GL TN K +V F+ Y
Sbjct: 61 KHSRFFFGKSKLMALALGKTTESEQGDNVHKLAKEIKGQCGLLFTNEKKSDVVKWFDNYY 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
++AR+G + V LPEGPL F MEP LRK G+P + G V L ++ VC G
Sbjct: 121 KPEYARSGFQVKKTVTLPEGPLLDFIGSMEPNLRKLGLPTVIKNGKVHLRHEYTVCNSGD 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAE-DFELYR---EGLDESDVES 216
L+P A+IL+L+G +A FK+ L C W + FE+ EG+++ VE+
Sbjct: 181 ILTPAQAQILKLIGECLAQFKITLKCVWMKDGSFEVLNDNIEGIEDEQVEN 231
>gi|146104563|ref|XP_001469862.1| putative 60S acidic ribosomal protein [Leishmania infantum JPCM5]
gi|398024882|ref|XP_003865602.1| 60S acidic ribosomal protein, putative [Leishmania donovani]
gi|134074232|emb|CAM72976.1| putative 60S acidic ribosomal protein [Leishmania infantum JPCM5]
gi|322503839|emb|CBZ38925.1| 60S acidic ribosomal protein, putative [Leishmania donovani]
Length = 227
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 120/210 (57%), Gaps = 12/210 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V L+KT+ K +E K+ ++ IR A+E+Y +Y F N+R ++ RE+
Sbjct: 1 MPKSKRAKIVPLTKTQAKTREDKDKLIERIREALEDYSDVYTFQLHNIRTNILQQIREER 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
+++G + + +K+S FL G GL TN+ K+EV+ F
Sbjct: 61 AGDSRIFLGNNKIMMIAIGRDEESAQKPNLHKLSPFLTGLCGLLFTNLSKKEVKEYFATV 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
+ARTG TATE + L GPL QF H M L K G+P++L++GV+ L+ D VCE G
Sbjct: 121 GAPVYARTGQTATESLVLKGGPLPQFPHSMFDHLAKLGLPIKLDRGVIVLLQDTTVCEPG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWS 198
LS E+A++L+L G++ A FK+ L W+
Sbjct: 181 DTLSAEAAQLLKLFGVQSAEFKMDLTAHWT 210
>gi|401420668|ref|XP_003874823.1| putative 60S acidic ribosomal protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491059|emb|CBZ26324.1| putative 60S acidic ribosomal protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 227
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 121/210 (57%), Gaps = 12/210 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ- 59
MPKSKR + V L+KT+ K +E K ++ IR A+E+Y +Y F N+R ++ RE+
Sbjct: 1 MPKSKRAKIVPLTKTQAKTREDKNKLIERIREALEDYSDVYTFQLHNIRTNILQQIREER 60
Query: 60 IKPSR---------LLWVGR--YPMRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SR ++ +GR + +K+S FL G GL TN+ K+EV+ F
Sbjct: 61 AGDSRIFLGNNKIMMIAIGRDEASAQKQNLHKLSPFLTGLCGLLFTNLSKKEVKEYFATV 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
+ARTG TATE + L GPL QF H M L K G+P++L++GV+ L+ D VCE G
Sbjct: 121 GAPVYARTGQTATESLVLKGGPLPQFPHSMFDHLAKLGLPIKLDRGVIVLLQDTTVCEPG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWS 198
LS E+A++L+L G++ A FK+ L W+
Sbjct: 181 DTLSAEAAQLLKLFGVQSAEFKIDLTAHWA 210
>gi|225709968|gb|ACO10830.1| mRNA turnover protein 4 homolog [Caligus rogercresseyi]
Length = 243
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 124/213 (58%), Gaps = 16/213 (7%)
Query: 1 MPKSKRDRPVTLSKTKKK-GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKRD+ V+L+KT+KK G E+K V+V+ IR+ + + I++F EN RNL + R +
Sbjct: 1 MPKSKRDKKVSLTKTEKKVGLENKRVLVDKIRDTLSGHTRIFLFETENARNLHLQRIRRE 60
Query: 60 IKPSR---LLWVGRYPMR------------YSQAYKVSKFLCGNTGLFLTNMPKEEVESL 104
K + + ++G+ + +K+S+ L G GL TN P +E
Sbjct: 61 WKEEKGGSVFFMGKNRIMSLALGRNEEEEIAPGLHKLSELLSGQRGLLFTNEPLDETLEY 120
Query: 105 FNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVV 164
FN + DFAR+GS AT+ V LPEGP+ + + +EP LR G+P L KG++ L + VV
Sbjct: 121 FNSNTEPDFARSGSIATQTVVLPEGPIPEMSFAIEPQLRSLGLPSALKKGILHLTKEHVV 180
Query: 165 CEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
C+EG L+ RIL+L G+K A F++ L+ W
Sbjct: 181 CKEGSTLNSNQTRILKLFGMKHADFRIKLLAVW 213
>gi|351725167|ref|NP_001236315.1| uncharacterized protein LOC100500064 [Glycine max]
gi|255628929|gb|ACU14809.1| unknown [Glycine max]
Length = 170
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/136 (57%), Positives = 99/136 (72%), Gaps = 12/136 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR+R VTLSKTKKKG++HKE IVN I++A E Y +YVFSFENMRN K KEFREQ+
Sbjct: 1 MPKSKRNRQVTLSKTKKKGRDHKETIVNGIKDAAEKYGCVYVFSFENMRNQKLKEFREQL 60
Query: 61 KPSRLLWVG-----RYPMRYSQA-------YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + ++G + + S + +KVSK L G++G+F TN+ KEEVE LF ++
Sbjct: 61 KSNSRFFLGSNKVMQVALGRSASDEIRPGLHKVSKLLRGDSGMFFTNLSKEEVERLFKEF 120
Query: 109 EDYDFARTGSTATEKV 124
E+YDFARTGS ATEKV
Sbjct: 121 EEYDFARTGSIATEKV 136
>gi|384492996|gb|EIE83487.1| hypothetical protein RO3G_08192 [Rhizopus delemar RA 99-880]
Length = 220
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 123/212 (58%), Gaps = 15/212 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR V+L+KT KKG+E KE ++N ++ V+NY +Y+FS ++MRN KE R
Sbjct: 1 MPKSKRSTVVSLTKTDKKGREGKEKLINDVQECVDNYSYLYLFSVKDMRNTFLKEIRNDF 60
Query: 61 KPSRLLW---------VGRYP-MRYSQAYK-VSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR + +G P Y + ++K L G+ TN +EV+S F+++
Sbjct: 61 KDSRFFYGKNRVMAKGLGTSPETEYKEGLSGIAKDLSNEVGMLFTNKDPKEVQSYFDEFV 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQ----FTHEMEPFLRKQGMPVRLNKGVVELVSDFVVC 165
D+AR+G+ AT+ V LPEGP+++ H MEP +R GMP L G+V L+ + +C
Sbjct: 121 HPDYARSGAIATQTVTLPEGPVKRGADPMPHNMEPLIRSLGMPTSLKNGIVTLLVPYTIC 180
Query: 166 EEGKPLSPESARILRLLGIKMATFKLHLICRW 197
EG+ L+ A +L+L ++A FK+ LI +
Sbjct: 181 TEGETLTTNQAHLLKLFYHQLAEFKVDLISYY 212
>gi|320163226|gb|EFW40125.1| Mrto4 protein [Capsaspora owczarzaki ATCC 30864]
Length = 257
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 112/193 (58%), Gaps = 11/193 (5%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-----------RYSQA 78
IR+ ++ Y S+YVF+ NMRN+K K+ R + K SR + M + +
Sbjct: 47 IRSCIQKYSSVYVFAVRNMRNIKLKDVRSEWKHSRFFFGKNRVMALALGNSEENEQETNL 106
Query: 79 YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEM 138
+VS L G TGL T+ P+EEV + F + D +FAR+G ++E V++P GPL QF+H M
Sbjct: 107 REVSNMLVGQTGLLFTSQPREEVIAWFENHHDLEFARSGFVSSETVKIPAGPLPQFSHTM 166
Query: 139 EPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
L + G+P+ LNKG++ L VC +G L+PE ARIL+L+ +A F + L WS
Sbjct: 167 HNDLLRLGLPIVLNKGIITLEKPHTVCSKGDTLTPEQARILKLIDRPLADFHIKLKAAWS 226
Query: 199 AEDFELYREGLDE 211
+FE+ EG D+
Sbjct: 227 NGEFEVLSEGDDD 239
>gi|341877541|gb|EGT33476.1| hypothetical protein CAEBREN_32388 [Caenorhabditis brenneri]
Length = 220
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 128/213 (60%), Gaps = 12/213 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
M +S+RD+ V+L+K KKK KE K +VN +R +VE YK++++F+ NMR+ +F R++
Sbjct: 1 MARSRRDKNVSLTKVKKKTKETKNNLVNEVRASVEQYKNLFIFTIANMRSTRFIAIRQKY 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + + G+ + +Q +K S+ L G GL TNM K+EV + F +
Sbjct: 61 KETSRFFFGKNNVIAIALGKQKSDEYANQLHKASELLKGQCGLMFTNMSKKEVLTEFAQI 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
+ D+AR G ATE V LPEGP+ QF MEP LRK G+P +L+KGV+ L F VC++G
Sbjct: 121 SEEDYARVGDEATETVVLPEGPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCKKG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAED 201
L+ E A+IL+ KMA F+L W+ +D
Sbjct: 181 DKLTVEQAKILKHFEYKMAEFRLIFKGFWNKKD 213
>gi|294900043|ref|XP_002776871.1| mRNA turnover protein 4 mrt4, putative [Perkinsus marinus ATCC
50983]
gi|239884072|gb|EER08687.1| mRNA turnover protein 4 mrt4, putative [Perkinsus marinus ATCC
50983]
Length = 246
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 133/237 (56%), Gaps = 20/237 (8%)
Query: 1 MPKSKRDRPVTLSK-TKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKR++ V L+K TK++ + K+ + IR +E ++ YV EN RN K R+
Sbjct: 1 MPKSKRNQVVNLTKVTKRQTRVKKDKAIEEIRECLEKFRFAYVLKLENQRNNLLKGLRDD 60
Query: 60 IKPSRL---------LWVGRYPMRYSQ--AYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
+KP RL + +G P Q + +S+ + G GL LT+M +++ + +
Sbjct: 61 LKPGRLFCGRNKVMQVALGVDPESECQEGIHALSEHISGEVGLLLTDMTADQLSDILVNH 120
Query: 109 EDYDFARTGSTATEKVELPEG--PLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
E +FAR+G +T + L G L +F H EPFLRK G+P L G + L+ D+ VC+
Sbjct: 121 EQSNFARSGCVSTADITLEAGDDALSRFPHSQEPFLRKLGLPTLLVNGKIRLMGDYEVCK 180
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFE--LYRE----GLDESDVESA 217
GK L+PE ++++LLGI MA F++ +I +WS ED + +Y E G++ D SA
Sbjct: 181 TGKALTPEQCQLVKLLGIPMAIFRVTIIAQWSKEDSQCTIYEEQQEGGMEVDDALSA 237
>gi|402223272|gb|EJU03337.1| hypothetical protein DACRYDRAFT_78248 [Dacryopinax sp. DJM-731 SS1]
Length = 253
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 124/219 (56%), Gaps = 19/219 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V+L+KT KK KE+K ++ I+ V +K +YVF +MRN K+ R+
Sbjct: 1 MPKSKRSKVVSLTKTDKKTKENKAKLIEDIKENVSKWKYVYVFDVSDMRNGALKDVRKAW 60
Query: 61 KPSRLLWVGRYPMRYS------------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + L+ GR + Q K++ L G GLF T+ KEE ++ F+ +
Sbjct: 61 KGTGRLFFGRNKVMAKALGTSEEEELKPQLRKLANRLEGPVGLFFTDWEKEETKAWFDDF 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQ-------FTHEMEPFLRKQGMPVRLNKGVVELVSD 161
DFAR G+ A++ V LP GP+ Q F H MEP LRK G+ +L +G+ + +
Sbjct: 121 RQKDFARAGNIASQTVTLPAGPIVQYNDPDSPFPHSMEPQLRKLGLSTKLVRGIPSVETP 180
Query: 162 FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
VVC GK LS E A++L+LLG++MA F++ L W+ +
Sbjct: 181 HVVCTVGKKLSSEQAQLLKLLGVQMAEFRVRLRAMWTED 219
>gi|388852234|emb|CCF54045.1| related to MRT4-mRNA turnover 4 [Ustilago hordei]
Length = 311
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 132/233 (56%), Gaps = 21/233 (9%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP++KR + ++L++T KK KE K +++ +R+A + Y +++ +MRN KE R+
Sbjct: 1 MPRAKRAKVISLTRTDKKTKEDKANLIDKVRDAAQEYPYVWMLGHHSMRNNYLKEVRDLW 60
Query: 61 KPSRL----LWVGRYPMRYSQAYKV-------SKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K S++ L V + S+ +V S+ L G+ GL T+ P EV FN Y+
Sbjct: 61 KGSKIFFGKLKVLALALGMSEEEEVRRGISGISQRLSGDVGLLFTDSPPAEVIDWFNDYQ 120
Query: 110 DYDFARTGSTATEKVELPEGPL-------EQFTHEMEPFLRKQGMPVRLNKGVVELVSDF 162
DFAR GS ATE +ELPEGP+ + H +EP LR+ GMP L +G+ L+ ++
Sbjct: 121 RVDFARGGSKATETIELPEGPVMARSNPPDTLPHPVEPQLRQLGMPTELRRGIPTLLKNY 180
Query: 163 VVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVE 215
+VC++G+ L+ A+IL+ + + MA F+L + WSA D E EG E V
Sbjct: 181 LVCKQGQTLTSNQAQILKHILVHMAAFRLIPLAYWSAADAE---EGKGEKGVH 230
>gi|341899820|gb|EGT55755.1| hypothetical protein CAEBREN_19651 [Caenorhabditis brenneri]
Length = 220
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 127/213 (59%), Gaps = 12/213 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
M +S+RD+ V+L+K KKK KE K +VN +R +V+ YK++++F+ NMR+ +F R++
Sbjct: 1 MARSRRDKNVSLTKVKKKTKETKNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKY 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + + G+ + +Q +K S+ L G GL TNM K+EV + F +
Sbjct: 61 KETSRFFFGKNNVIAIALGKQKSDEYANQLHKASELLKGQCGLMFTNMSKKEVLTEFAQI 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
+ D+AR G ATE V LPEGP+ QF MEP LRK G+P L+KGV+ L F VC++G
Sbjct: 121 SEEDYARVGDEATETVVLPEGPISQFAFSMEPQLRKLGLPTELDKGVITLYQQFEVCKKG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAED 201
L+ E A+IL+ KMA F+L W+ +D
Sbjct: 181 DKLTVEQAKILKHFEYKMAEFRLIFKGFWNKKD 213
>gi|225712724|gb|ACO12208.1| mRNA turnover protein 4 homolog [Lepeophtheirus salmonis]
gi|290561501|gb|ADD38151.1| mRNA turnover protein 4 homolog [Lepeophtheirus salmonis]
Length = 244
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 124/213 (58%), Gaps = 16/213 (7%)
Query: 1 MPKSKRDRPVTLSKTKKK-GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKRD+ V+L+KT KK G E K +V+ IR +++ Y +++F EN RNL ++ R +
Sbjct: 1 MPKSKRDKKVSLTKTDKKVGLESKRALVDKIRESLDAYTRVFIFETENARNLHLQKIRRE 60
Query: 60 IKPSR---LLWVGRYPM------RYSQA------YKVSKFLCGNTGLFLTNMPKEEVESL 104
K + + ++G+ + R ++ +K+S L G GL TN ++
Sbjct: 61 WKEDKGGSVFFMGKNRVMSLALGRSAEEEVGPGLHKISALLNGQRGLLFTNETLDDSLDY 120
Query: 105 FNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVV 164
F K ++ DFAR+G A + V LPEGP+++ + +EP LR G+P L KG++ L D VV
Sbjct: 121 FQKNKEPDFARSGGIAPQTVVLPEGPIQEMSFAIEPQLRALGLPSTLKKGILHLTKDHVV 180
Query: 165 CEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
C+EG+ L ARIL+L G+K A F + L+ W
Sbjct: 181 CKEGQTLDSTQARILKLFGMKHADFSIKLLAYW 213
>gi|71003598|ref|XP_756465.1| hypothetical protein UM00318.1 [Ustilago maydis 521]
gi|46096070|gb|EAK81303.1| hypothetical protein UM00318.1 [Ustilago maydis 521]
Length = 315
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 126/221 (57%), Gaps = 18/221 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP++KR + V+L++T KK KE K +++ +R+A + Y +++ +MRN KE R+
Sbjct: 1 MPRAKRAKVVSLTRTDKKTKEDKANLIDKVRDAAQEYPYVWILGHHSMRNNYLKEVRDLW 60
Query: 61 KPSRL----LWVGRYPMRYSQAYKV-------SKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K S++ L V + ++ +V S+ L G+ GL T P EV F Y+
Sbjct: 61 KGSKIFFGKLKVLALALGMTEEEEVRTGISGISQRLSGDVGLLFTESPPAEVIDWFKDYQ 120
Query: 110 DYDFARTGSTATEKVELPEGPL-------EQFTHEMEPFLRKQGMPVRLNKGVVELVSDF 162
DFAR GS ATE +ELPEGP+ + H +EP LR+ GMP L +G+ L+ ++
Sbjct: 121 RVDFARGGSKATETIELPEGPVMARSNPPDTLPHPVEPQLRQLGMPTELRRGIPTLLQNY 180
Query: 163 VVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFE 203
VVC+EG+ L+ A+IL+ + + MA F+L + WSA D E
Sbjct: 181 VVCKEGQTLTSNQAQILKHILVHMAAFRLIPLAYWSAADAE 221
>gi|443896202|dbj|GAC73546.1| protein involved in mRNA turnover [Pseudozyma antarctica T-34]
Length = 314
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 124/221 (56%), Gaps = 18/221 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP++KR + V+L++T KK KE+K +++ +R+A + Y +++ +MRN KE R+
Sbjct: 1 MPRAKRAKVVSLTRTDKKTKENKANLIDKVRDAAQEYPYVWILGHHSMRNNYLKEVRDLW 60
Query: 61 KPSRLLWVGRYPMRYSQAYK-----------VSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K S++ + + + +S+ L G+ GL T+ P EV F Y+
Sbjct: 61 KGSKIFFGKLKVLALALGMTEEEEVRTGISGISQRLSGDVGLLFTDSPPAEVMDWFKDYQ 120
Query: 110 DYDFARTGSTATEKVELPEG-------PLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDF 162
DFAR GS ATE +ELPEG P + H +EP LR+ GMP L +G+ L+ ++
Sbjct: 121 RVDFARGGSKATETIELPEGAVMARSNPPDTLPHPVEPQLRQLGMPTELRRGIPTLLQNY 180
Query: 163 VVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFE 203
VVC+EG+ L+ A+IL+ + + MA F+L + WSA D E
Sbjct: 181 VVCKEGQTLTSNQAQILKHILVHMAQFRLIPLAYWSAADAE 221
>gi|390603021|gb|EIN12413.1| hypothetical protein PUNSTDRAFT_97129 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 251
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 125/235 (53%), Gaps = 20/235 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR++ VTLSK KK ++HK +V ++ AV+ +K ++F NMRN K R+
Sbjct: 1 MPKSKRNKVVTLSKVDKKNRDHKNALVAEVQGAVDKWKYCWLFDVGNMRNAHLKTVRKLW 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + L+ GR + + + ++ + G GLF T+ EV F +
Sbjct: 61 KDTGRLFFGRGAVMAIALGTTPESEHKTGLHHLASRIKGQVGLFFTDSEPAEVTEWFGDF 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQ--------FTHEMEPFLRKQGMPVRLNKGVVELVS 160
DFAR+G+ AT V LPEGP+ Q F H EP LRK G+ + +GV L +
Sbjct: 121 HPPDFARSGNVATRTVVLPEGPIMQHHSDPPEPFPHNEEPQLRKLGLHTVMKRGVPSLDN 180
Query: 161 DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVE 215
VC +GK L+PE A++L+L+G KM FK+ L WSAE E+ DE VE
Sbjct: 181 PHTVCTKGKVLTPEQAQLLKLVGEKMVEFKVGLRAYWSAETGEVTTVEGDEIAVE 235
>gi|449549139|gb|EMD40105.1| hypothetical protein CERSUDRAFT_132940 [Ceriporiopsis subvermispora
B]
Length = 250
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 123/219 (56%), Gaps = 20/219 (9%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V+L+K KK +EHK ++N ++ + ++ ++F+ NMRN K R+
Sbjct: 1 MPKSKRAKLVSLTKVSKKTREHKNALLNEVQENADKWQYCWLFAVGNMRNAHLKTVRKLW 60
Query: 61 KPSRLLWVGRYPMRYSQA------------YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K S ++ GR + +K++K + G GL T+ P +EV F +
Sbjct: 61 KDSARIFFGRGAVMAKALGTTPEEEHRMGLHKLAKQIKGQVGLMFTDSPPQEVLDWFADF 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQ--------FTHEMEPFLRKQGMPVRLNKGVVELVS 160
+ DFAR+G+ AT+ V LPEGP+ Q F H +P LRK G+ + +GV L +
Sbjct: 121 QQPDFARSGNRATQTVILPEGPVMQQHSTPPEPFPHNEDPQLRKLGLRTTMKRGVPTLDT 180
Query: 161 DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
VCE+GK L+ E A++L+L+GIKM TFK+ L RW A
Sbjct: 181 PHTVCEKGKKLTSEQAQLLKLIGIKMITFKVGLRARWEA 219
>gi|401886706|gb|EJT50731.1| ribosomal protein [Trichosporon asahii var. asahii CBS 2479]
gi|406698645|gb|EKD01879.1| ribosomal protein [Trichosporon asahii var. asahii CBS 8904]
Length = 244
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 133/243 (54%), Gaps = 30/243 (12%)
Query: 1 MPKSKRDRPVTLSKTK-KKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKR R TLSKT + K K +VN I+ A++ Y +++FS +MRN KE R+Q
Sbjct: 1 MPKSKRQRVTTLSKTPIRTTKASKAALVNEIQKAIDEYDHVFLFSVGDMRNEGLKEVRQQ 60
Query: 60 IKPSRLLWVGRYPM-----------RYSQAY-KVSKFLCGNTGLFLTNMPKEEVESLFNK 107
+ + ++ G+ + Y + ++ + L G GLFLT+ P E+ + F+
Sbjct: 61 WRGTGRMFFGKTRVMAKALGINDETEYEEGLGQLGRRLKGPVGLFLTSHPVEDTKEWFDT 120
Query: 108 YEDYDFARTGSTATEKVELPEGPL----------EQFTHEMEPFLRKQGMPVRLNKGVVE 157
+ ++AR G+ ATE + LP+GPL + H M+P LR+ G+ L KGV
Sbjct: 121 WVKKEYARQGNPATETITLPKGPLLTPYSADGSGDPLPHSMDPQLRQLGLDTLLVKGVPS 180
Query: 158 LVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS-------AEDFELYREGLD 210
L + V+C+EG+ LS E RIL+LL I+MA FK+HL WS ++ + EG+D
Sbjct: 181 LREETVLCKEGEKLSSEKCRILKLLAIQMAEFKIHLGSHWSKGTGFVEGKELDAEGEGMD 240
Query: 211 ESD 213
E D
Sbjct: 241 EDD 243
>gi|328871640|gb|EGG20010.1| ribosomal protein L10 family protein [Dictyostelium fasciculatum]
Length = 228
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 123/226 (54%), Gaps = 12/226 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
M +SKR + V+L+ K E K+ +V ++R ++ YKSIYV SF+N RN K+ R
Sbjct: 1 MARSKRSKVVSLTTVVKNPGEKKKRLVANVRELIDEYKSIYVVSFDNARNSHLKQARTDW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+ L+ + + KV+K+L G LF TN K+ V + F ++
Sbjct: 61 PASKFLYGKKQVLAVGLGRTLEEELRPNLSKVTKYLSGECALFFTNDSKDTVMTYFENFK 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ D AR G E V +P G ++ H EP+LRK GMP L G++ L SDF +CEEG
Sbjct: 121 EEDHARAGFVPKETVVIPAGTIDML-HSQEPYLRKLGMPTLLKAGIISLESDFNLCEEGI 179
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVE 215
P++P+ A++++L K++ F ++ WS + FE + E + D+E
Sbjct: 180 PVTPDQAKLMQLFDKKISEFSFRVVGVWSDDAFEAFAEPSQDGDME 225
>gi|453087003|gb|EMF15044.1| mRNA turnover protein [Mycosphaerella populorum SO2202]
Length = 241
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 120/241 (49%), Gaps = 24/241 (9%)
Query: 1 MPKSKRDRPVTLSKTKKK-GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKR+R + S +KK KE E + +SI AV+ Y I+VFS ENMRN K+ R+
Sbjct: 1 MPKSKRNRIIHTSVVQKKPAKERSEALFSSIHAAVDEYAHIFVFSVENMRNTYLKDVRQH 60
Query: 60 IKPSRLLWVGRYPMRYSQA-----------YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SR+ + M + K++K+L GN GL TN EEV F +
Sbjct: 61 FADSRIFYGKTKVMAKALGSSVEDEHAPGLAKLTKYLAGNVGLLFTNRAPEEVLEFFEGF 120
Query: 109 EDYDFARTGSTATEKVELPEGPLE------------QFTHEMEPFLRKQGMPVRLNKGVV 156
+ DFAR G AT +P G + Q H +E +RK GMP RL+KG V
Sbjct: 121 VEVDFARAGVVATRTFTVPAGIVYSRGGEVAVEDDVQLPHSLEVMVRKWGMPTRLDKGKV 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVES 216
L ++ VC+EGK L+ +L++ G+ M+ FK+ + WSA + G + D
Sbjct: 181 VLDQEYTVCQEGKQLNSHQTALLKMFGVAMSEFKVDVQAYWSAATQSVTEVGGKDGDAME 240
Query: 217 A 217
A
Sbjct: 241 A 241
>gi|325179806|emb|CCA14209.1| mRNA turnover protein 4 putative [Albugo laibachii Nc14]
Length = 235
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 121/214 (56%), Gaps = 11/214 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR R TL+KT KKG E K+ IV S+R AV+ Y +++VFSFENMR K+ R ++
Sbjct: 1 MPKSKRHRVHTLTKTSKKGSELKKNIVASLREAVDEYGAVFVFSFENMRTNHLKDVRMEL 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
+ SR+ M+ + + +++++ L GN GL T +EE+ F ++
Sbjct: 61 RDSRMFLGKNKVMKVALGRHKEEEYADELHRLARDLSGNVGLLFTKRSEEEILKAFKTFQ 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
++ R G ATE + +P+GPL QFT M LR+ G+ V L V L D +C +G
Sbjct: 121 VPEYPRGGFCATETIVIPKGPLPQFTGSMVQTLRELGLLVDLKNMQVILQEDTTLCTKGN 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFE 203
L+PE A++L KMA F+L L+ WS ++
Sbjct: 181 LLTPEQAKLLTHFDRKMAEFRLQLVSVWSGGKYQ 214
>gi|392566196|gb|EIW59372.1| mRNA turnover protein 4-like protein [Trametes versicolor FP-101664
SS1]
Length = 256
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 122/226 (53%), Gaps = 20/226 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V+L+K KK +E K V + I+ + ++ ++F NMRN K R+
Sbjct: 1 MPKSKRSKIVSLTKVAKKTREDKNVFLQEIQENADKWQYCWLFEVGNMRNSHLKTVRKLW 60
Query: 61 KPSRLLWVGRYPMRYSQA------------YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + ++ GR + +K++K + G GLF T+ EEV F +
Sbjct: 61 KDTARIFFGRGAVMAKALGATPAEEHRLGLHKLAKQIKGQVGLFFTDTAPEEVVDWFADF 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQ--------FTHEMEPFLRKQGMPVRLNKGVVELVS 160
+ DFARTG+ AT V LP GP+ Q F H EP LRK G+ R+++GV L
Sbjct: 121 QQPDFARTGNRATRAVVLPAGPVMQQHATPPEPFPHNEEPQLRKLGLRTRMDRGVPTLDV 180
Query: 161 DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYR 206
VCE G+ L+PE ++L+L+GI+M TFK+ L RW AE E+ +
Sbjct: 181 PHTVCEAGRVLTPEQTQLLKLIGIRMVTFKVGLRARWEAESGEVVQ 226
>gi|302828484|ref|XP_002945809.1| hypothetical protein VOLCADRAFT_72439 [Volvox carteri f.
nagariensis]
gi|300268624|gb|EFJ52804.1| hypothetical protein VOLCADRAFT_72439 [Volvox carteri f.
nagariensis]
Length = 272
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 116/213 (54%), Gaps = 16/213 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR++ V+L+K KKK + KE ++ IR ++ Y ++Y+F NMR +FK+ RE++
Sbjct: 1 MPKSKRNKVVSLTKVKKKDRAWKEGLLEKIRQCLDTYPTVYLFKHYNMRTERFKQLREEL 60
Query: 61 KPSRLLWVGRYPM-------RYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFNKY 108
+ S +G + + YK +S+ + G GL T + EEV+ Y
Sbjct: 61 QDSSRFILGSTSLMQVALGRTAADEYKTGLSRLSELIKGTVGLLFTKLSHEEVQGAIESY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQ----FTHEMEPFLRKQGMPVRLNKGVVELVSDFVV 164
D+AR G+ A L GPL H +EP LRK G+P +LNKGVVEL++D V
Sbjct: 121 VYEDYARVGARAAHDFALTAGPLGGPMGPLPHTLEPQLRKFGLPTKLNKGVVELLADHTV 180
Query: 165 CEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
C G+ L A ILR+ IKMA KL L+ W
Sbjct: 181 CRTGQKLDANQAGILRVFDIKMAECKLKLLAVW 213
>gi|323507848|emb|CBQ67719.1| related to MRT4-mRNA turnover 4 [Sporisorium reilianum SRZ2]
Length = 306
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 125/221 (56%), Gaps = 18/221 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP++KR + V+L++T KK KE K +++ +R+A + Y +++ +MRN KE R+
Sbjct: 1 MPRAKRAKVVSLTRTDKKTKEDKANLIDKVRDAAQEYPYVWILGHHSMRNNYLKEVRDLW 60
Query: 61 KPSRL----LWVGRYPMRYSQAYKV-------SKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K S++ L V + ++ +V S+ L G+ GL T P EV F Y+
Sbjct: 61 KGSKIFFGKLKVLALALGMTEEEEVRTGISGISQRLSGDVGLLFTESPPAEVIDWFKDYQ 120
Query: 110 DYDFARTGSTATEKVELPEGPL-------EQFTHEMEPFLRKQGMPVRLNKGVVELVSDF 162
DFAR GS ATE +ELPEGP+ + H +EP LR+ GMP L +G+ L+ ++
Sbjct: 121 RVDFARGGSKATETIELPEGPVMARSNPPDTLPHPVEPQLRQLGMPTELRRGIPTLLQNY 180
Query: 163 VVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFE 203
VC++G+ L+ A+IL+ + + MA F+L + WSA D E
Sbjct: 181 TVCKQGQTLTANQAQILKHILVHMAAFRLIPLAYWSAADAE 221
>gi|225718576|gb|ACO15134.1| mRNA turnover protein 4 homolog [Caligus clemensi]
Length = 247
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 125/213 (58%), Gaps = 16/213 (7%)
Query: 1 MPKSKRDRPVTLSKTKKK-GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKRD+ ++L++T+KK G E K V+V+ IR + ++ I++F EN RNL + R +
Sbjct: 1 MPKSKRDKKISLTQTQKKVGLESKRVLVDRIRETLNSHSRIFLFETENARNLHLQRIRRE 60
Query: 60 IKPSR---LLWVGRYPM------RYSQA------YKVSKFLCGNTGLFLTNMPKEEVESL 104
K + + ++G+ + R ++ +K+++ L G GL TN P +E
Sbjct: 61 WKDEKGGSVFFMGKNRVMSLALGRSAEEEIAPGLHKLAELLKGQRGLLFTNEPLDETLEY 120
Query: 105 FNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVV 164
F+ + DFAR+G A + + LPEGP+ + +EP LR G+P L KGV+ L D+VV
Sbjct: 121 FSSNTEPDFARSGGIAPQTIVLPEGPVADMSFAIEPQLRSLGLPSALKKGVLHLTKDYVV 180
Query: 165 CEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
C+EG L+ ARIL+L G+K + FK+ L+ W
Sbjct: 181 CKEGSTLNSNQARILKLFGMKHSEFKIKLLGVW 213
>gi|156083206|ref|XP_001609087.1| hypothetical protein [Babesia bovis T2Bo]
gi|154796337|gb|EDO05519.1| conserved hypothetical protein [Babesia bovis]
Length = 225
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 120/222 (54%), Gaps = 18/222 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSI-----YVFSFENMRNLKFKE 55
MPKSKR + V L+ KK KE K +V+SIR ++E + I YV + N RN KE
Sbjct: 1 MPKSKRSKEVKLTAVKKNAKERKVNLVDSIRTSIEAPEGIEERFVYVIALNNQRNSPLKE 60
Query: 56 FREQIKPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESL 104
R +KP RL + M+ + +K+++ + G L ++N + V +
Sbjct: 61 LRTILKPGRLFYGKNKVMQLALGAKPENELLDNLHKIAECISGERALLVSNEAPDVVRNK 120
Query: 105 FNKYEDYDFARTGSTATEKVELPEG--PLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDF 162
Y+ DFA+ G+ ATE + L G LE F MEP R GMP L G +EL+ D+
Sbjct: 121 LESYKVNDFAKAGNVATETILLKPGDSTLEVFPGNMEPQFRHLGMPTTLKMGKIELLGDY 180
Query: 163 VVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
+VCEEGKPL+P A++L++LGI+MA F+ + W+ F L
Sbjct: 181 LVCEEGKPLTPTQAKVLKVLGIRMALFECTIHAHWNNGTFRL 222
>gi|312071184|ref|XP_003138491.1| ribosomal protein L10 domain-containing protein [Loa loa]
gi|307766349|gb|EFO25583.1| ribosomal protein L10 domain-containing protein [Loa loa]
Length = 219
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 123/210 (58%), Gaps = 12/210 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR+ V+L++ KKK KE K + + IR V+ Y++++V ENMR+ KF E R++
Sbjct: 1 MPKSKREVDVSLTRVKKKTKEQKIKLADEIRKCVDTYENLFVLEIENMRSTKFIEIRQKY 60
Query: 61 KP-SRLLW---------VGRYPM-RYSQAY-KVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K SR + +G+ P Y+ KVS L G GL TN E ++ F++
Sbjct: 61 KNNSRFFYGKNNVMAIALGKNPCTEYAHELNKVSGLLKGECGLMFTNEDHEIIKKYFDEL 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
DFAR G A +EL EGPL QF +EP LRK G+P +L KG+V L+S + VC++G
Sbjct: 121 YTLDFARCGQVAASTIELCEGPLMQFPFSLEPQLRKLGLPTKLEKGIVTLISHYTVCKDG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWS 198
L+ + R+L+LL K++TF + L WS
Sbjct: 181 DKLTADQCRLLKLLNYKLSTFHVKLSAHWS 210
>gi|294879220|ref|XP_002768606.1| mRNA turnover protein 4 mrt4, putative [Perkinsus marinus ATCC
50983]
gi|239871277|gb|EER01324.1| mRNA turnover protein 4 mrt4, putative [Perkinsus marinus ATCC
50983]
Length = 221
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 122/215 (56%), Gaps = 14/215 (6%)
Query: 1 MPKSKRDRPVTLSK-TKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKR++ V L+K +K++ +E K+ + IR +E ++ YV EN RN K R
Sbjct: 1 MPKSKRNQVVNLTKVSKRQTREKKDRAIEEIRKCLEKFRYAYVLKLENQRNKLLKGLRND 60
Query: 60 IKPSRL---------LWVGRYPMRYSQ--AYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
+KP RL + +G P Q + +S+ + G GL LT+M +++ + +
Sbjct: 61 LKPGRLFCGRNKVMQVALGVDPESECQEGIHALSERISGEVGLLLTDMTADQLMDILANH 120
Query: 109 EDYDFARTGSTATEKVELPEG--PLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
E +FAR+G +T + L G L +F H EPFLRK G+P L G + L+ D+ VC+
Sbjct: 121 EQSNFARSGCISTGDITLEAGDDALSRFPHSQEPFLRKLGLPTLLVNGKIRLMGDYEVCK 180
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAED 201
GK L+PE ++++LLGI MA F++ + +WS E+
Sbjct: 181 TGKALTPEQCQLVKLLGIPMAVFRVSIAAQWSKEN 215
>gi|407924321|gb|EKG17374.1| Ribosomal protein L10/acidic P0 [Macrophomina phaseolina MS6]
Length = 235
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/223 (38%), Positives = 119/223 (53%), Gaps = 23/223 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR R V LSK +KKGKE E + N++R A +N+K I+VF ENMRN KE R++
Sbjct: 1 MPKSKRARVVHLSKVEKKGKELSERLFNNVREAADNFKYIFVFDVENMRNNYLKEVRQEF 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
SRL + M + +K++ L GN GLF TN E+ F Y
Sbjct: 61 SDSRLFFGKTKVMAKALGTDAASEHLPNIHKLAARLEGNVGLFCTNREPSEIIEYFQTYA 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G A++ +P G P+E+ H +E +RK GMP RL KG V
Sbjct: 121 QTDFARAGVVASQTFTVPAGVVYSRGGELPVEEDVPLPHPVEVTVRKWGMPTRLEKGKVM 180
Query: 158 LVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
L + VC+EG+ L+ + +L+L G+ MA FK+ L ++ E
Sbjct: 181 LDQPYTVCKEGETLNSHQSALLKLFGVAMAEFKIKLTAYYNKE 223
>gi|312380235|gb|EFR26292.1| hypothetical protein AND_07761 [Anopheles darlingi]
Length = 294
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 129/230 (56%), Gaps = 22/230 (9%)
Query: 2 PKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIK 61
P DRP + T +K K+ I+ I+ E Y+++++F+ +NMRN K KE R + K
Sbjct: 18 PGLSTDRPDVV--TDRKELSEKQQIIEEIQMCREKYENVFLFTVQNMRNSKLKEIRTKWK 75
Query: 62 PSRLLWVGRYPMRY-----SQAYKVSKF----------LCGNTGLFLTNMPKEEVESLFN 106
SR + M+ S K+ K + G GL T+ KE V F+
Sbjct: 76 NSRFFFGKNRVMQLGLKLVSDEDKLGKLEAGMDQLREQMIGQCGLLFTSETKETVLDWFD 135
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
Y ++AR+G AT+ V+L GPLE+F+H +EP LR GMP +L++GVV L ++ VCE
Sbjct: 136 SYIVDEYARSGFRATQTVKLEAGPLEEFSHAIEPHLRSLGMPTKLDRGVVTLYKEYTVCE 195
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSA-EDFELYREGLDESDVE 215
+ K L+PE ARIL+LLG MA FK+ + C ++A E FEL ++ DVE
Sbjct: 196 KNKVLTPEQARILKLLGKPMAKFKIIINCCYTAKEGFEL----INNRDVE 241
>gi|66818889|ref|XP_643104.1| ribosomal protein L10 family protein [Dictyostelium discoideum AX4]
gi|74860796|sp|Q86HD3.1|MRT4_DICDI RecName: Full=mRNA turnover protein 4 homolog
gi|60471196|gb|EAL69159.1| ribosomal protein L10 family protein [Dictyostelium discoideum AX4]
Length = 223
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 123/218 (56%), Gaps = 11/218 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
M KSKR+ V ++K K E K+ +V++I++ V+ YK IY+F+FENMRN K K R +
Sbjct: 1 MVKSKRNVVVNMTKVTKNPGEKKKKLVSTIKDIVDQYKFIYLFTFENMRNNKLKSVRTEW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+ L+ + +K+++ L G GLF TN PK++V F Y
Sbjct: 61 STSKFLFGKNKVLSVGLGKSEEDELKPNLHKLTEHLEGECGLFFTNEPKDKVFEYFTNYS 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ DF R+G + E + + EGP+ TH ME +LR G+P L GV+ + ++ +CE G
Sbjct: 121 EKDFPRSGFVSEETITIKEGPIVGMTHSMETYLRGLGLPTTLKNGVIFVDREYTLCEAGV 180
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFELYRE 207
++PE +++L+L +++ FK H+ W+ ++F L E
Sbjct: 181 AVTPEQSQLLKLFNHEISEFKFHIKGFWNEDEFTLCEE 218
>gi|412986243|emb|CCO17443.1| predicted protein [Bathycoccus prasinos]
Length = 299
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 134/271 (49%), Gaps = 59/271 (21%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR++ V L++ KKK ++ KE +V SIR+AV+ Y S++VF +NMRN FK R+ +
Sbjct: 1 MPKSKRNKVVALTQVKKKDRKWKESLVESIRDAVDTYPSVFVFRCKNMRNETFKSLRDDV 60
Query: 61 -KPSRLLWVGRYPMRYSQAYKVSK--------FLCGN----------------------- 88
SR G MR + K S+ + N
Sbjct: 61 SNTSRFFVGGNKLMRAALLGKESEEGLKTFAEHIVNNRDGKDDDDDDGGGGGQKQQKETK 120
Query: 89 -----------------TGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPL 131
TG+ TN+ KE++ E DFAR G ATE + PEGP+
Sbjct: 121 KQQRGRQNEEFDLNTTTTGIVFTNLSKEDLMQAMEAKETKDFARVGQIATETIVCPEGPV 180
Query: 132 EQ-----FTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKM 186
+ +H +E LRK G+P +LNKGVVE V++ ++C+ G LS + +LR G K+
Sbjct: 181 KNCFDVPMSHTLEAMLRKHGLPTKLNKGVVECVNEKIICKRGVKLSSDQCALLRQFGYKL 240
Query: 187 ATFKLHLICRW--SAEDFELYREGLDESDVE 215
ATFKL L+ W S + E++ ++E D E
Sbjct: 241 ATFKLRLVAGWEKSTGETEVF---MNEDDSE 268
>gi|242213127|ref|XP_002472393.1| hypothetical mRNA turnover protein 4-like protein [Postia placenta
Mad-698-R]
gi|220728469|gb|EED82362.1| hypothetical mRNA turnover protein 4-like protein [Postia placenta
Mad-698-R]
Length = 257
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 127/240 (52%), Gaps = 23/240 (9%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V+L+K KK +E K ++ ++ + ++ ++F NMRN K R+
Sbjct: 1 MPKSKRSKVVSLTKVAKKTREQKNALLKEVQENSDKWQYCWLFEVGNMRNAHLKTVRKLW 60
Query: 61 KPSRLLWVGRYPMRYSQA------------YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K S ++ GR + +K++K + G GLF T+ P EV + F +
Sbjct: 61 KDSARMFFGRGAVMAKALGMTPEEEHRLGLHKLAKQIKGQVGLFFTDTPPAEVIAWFEDF 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQ--------FTHEMEPFLRKQGMPVRLNKGVVELVS 160
DFARTG+ A V LP GP+ Q F H EP LRK G+ + +GV L +
Sbjct: 121 SQPDFARTGNAAPRTVVLPTGPVMQQHSEPPEPFPHNEEPQLRKLGLRTSMVRGVPTLTA 180
Query: 161 DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYR-EG--LDESDVESA 217
VCE GK +SPE A++L+L+G++M F+L L RW A E+ + EG +DE ++E
Sbjct: 181 PHTVCERGKAISPEQAQLLKLVGLRMVRFRLGLRARWEAASGEVVQVEGVKIDEEELEGG 240
>gi|169625499|ref|XP_001806153.1| hypothetical protein SNOG_16023 [Phaeosphaeria nodorum SN15]
gi|160705666|gb|EAT76602.2| hypothetical protein SNOG_16023 [Phaeosphaeria nodorum SN15]
Length = 268
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 117/221 (52%), Gaps = 23/221 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V L+KT KKGKE + + +++ A +N++ I+VF+ ENMRN KE R
Sbjct: 1 MPKSKRAKVVHLTKTDKKGKELSQKLFANVQEAADNFEHIFVFAVENMRNSYLKEVRAAF 60
Query: 61 KPSRLLW---------VGRYPM--RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
SR + +G+ P + K++++L GN GLF TN E+ F Y
Sbjct: 61 SDSRFFFGKTKVMAKALGQTPAEEHLTNLSKLTEYLAGNVGLFFTNRDPSEIIEYFGAYS 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQ------------FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G TA++ +P G + H +E +RK GMP RL+KG +
Sbjct: 121 QTDFARAGVTASQTFTIPAGVVHSRGGEIPEEEDVALPHSVETTIRKWGMPTRLDKGKIM 180
Query: 158 LVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
L + + VC EG+ ++ +L++ G+ MA FK+ L +S
Sbjct: 181 LDAPYTVCTEGETMNSHKTALLKMFGVAMAEFKIDLKAYYS 221
>gi|313232101|emb|CBY09212.1| unnamed protein product [Oikopleura dioica]
Length = 278
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 125/218 (57%), Gaps = 14/218 (6%)
Query: 1 MPKSKRDRPVTLSKTKKK-GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKS+RD+ +L++TKK+ G EHKE +V+ I++ V +Y+ I+++S EN RN K K+ R +
Sbjct: 1 MPKSRRDKTYSLTQTKKQVGLEHKEKVVSQIQDFVNSYERIFIYSLENSRNNKLKDLRAE 60
Query: 60 IKPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNK 107
K ++G+ + +K S+ L G TGL TN +EEV FNK
Sbjct: 61 FKDDSRFYLGKNKLCQVAFGKSKELEAAEGLHKFSQSLAGETGLLFTNKKEEEVVEYFNK 120
Query: 108 YEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQ-GMPVRLNKGVVELVSDFVVCE 166
Y +AR G + V++ GPL QF+ +E LR++ +P L GVV L+ DF + +
Sbjct: 121 YNSASYARVGEKSEVTVKVVAGPLPQFSFAIEGHLRERLKLPTALKDGVVTLMQDFFLAK 180
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
+G+ ++ + +R+L+L G + TF + L W+ E E+
Sbjct: 181 DGEAITAQQSRLLKLFGCAITTFNVKLTKMWNKESGEV 218
>gi|330797356|ref|XP_003286727.1| hypothetical protein DICPUDRAFT_31349 [Dictyostelium purpureum]
gi|325083325|gb|EGC36781.1| hypothetical protein DICPUDRAFT_31349 [Dictyostelium purpureum]
Length = 220
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 118/206 (57%), Gaps = 11/206 (5%)
Query: 10 VTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVG 69
V L+K K E K+ ++N+I++ ++NYKSIY+F++ENMRN K K R S+ L+
Sbjct: 6 VPLTKVTKNPGEKKKKLINTIKDTIDNYKSIYLFTYENMRNNKLKALRTAWSTSKFLFGK 65
Query: 70 RYPMRYSQA-----------YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGS 118
+ Y +K+S+ L G GLF TN P+E+V F + + DF R+G
Sbjct: 66 NKVLAYGLGKSEEDELKTGLHKLSEHLEGECGLFFTNEPREKVLEYFENFSEKDFPRSGF 125
Query: 119 TATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARI 178
E + + EGPL F H ME +LR G+P L GV+ L D+ +CEEG ++P+ +++
Sbjct: 126 VPEETITIKEGPLTGFVHSMETYLRGLGLPTSLKNGVIYLERDYDICEEGVAINPDQSQL 185
Query: 179 LRLLGIKMATFKLHLICRWSAEDFEL 204
L+L +++ FK+ + ++ E+F L
Sbjct: 186 LKLFNHQISEFKIVVKGVYTEEEFTL 211
>gi|302689811|ref|XP_003034585.1| hypothetical protein SCHCODRAFT_66900 [Schizophyllum commune H4-8]
gi|300108280|gb|EFI99682.1| hypothetical protein SCHCODRAFT_66900 [Schizophyllum commune H4-8]
Length = 252
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 128/236 (54%), Gaps = 21/236 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V+L+K K+ KE K ++ I+ VE ++ ++F NMRN K R+
Sbjct: 1 MPKSKRAKVVSLTKVAKRTKEEKGELITQIQENVEKWQYCWLFEVGNMRNAHLKTVRKLW 60
Query: 61 KPS-RLLW---------VGRYPMRYSQ--AYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K S RL++ +G P + K+++ L G GLF TN P EV F +
Sbjct: 61 KDSGRLVFARSTVMAKALGTTPESEHRPGVSKLARQLKGQVGLFFTNSPPSEVTEWFADF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL--------EQFTHEMEPFLRKQGMPVRLNKGVVELVS 160
+ DFAR G+TA V LP GP+ E F H EP LRK G+ +N+GV L +
Sbjct: 121 QQPDFARAGNTAPRTVVLPAGPVMQRHSDPPEPFPHNEEPQLRKLGLTTYMNRGVPSLHA 180
Query: 161 DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYR-EGLDESDVE 215
+CE G L+ E A++L+L+G KM TF++ L+ RW AE E+ + EG +D +
Sbjct: 181 PHKICEAGHKLTAEQAQLLKLIGEKMVTFRVGLLARWDAETGEVTQIEGPRIADAQ 236
>gi|6015629|emb|CAB57816.1| muscle protein 684 [Mus musculus]
Length = 207
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 103/177 (58%), Gaps = 17/177 (9%)
Query: 38 KSIYVFSFENMRNLKFKEFREQIKPSRLLW---------VGRYPMRYSQAYK-----VSK 83
K +++FS NMRN + K+ R K SR+ + +GR P S YK V K
Sbjct: 25 KYLFIFSVANMRNSELKDIRNAWKHSRMFFGKNKVMMVPLGRSP---SDEYKDNLHQVGK 81
Query: 84 FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLR 143
L G GL TN KEEV F K + DFAR G+ AT V L GPL+QF H MEP LR
Sbjct: 82 KLRGEVGLLFTNRTKEEVNEWFTKXTEMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLR 141
Query: 144 KQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
+ G+P L KGVV L+SD+ VC+EG L+PE ARIL+L G +MA FK+ + W A+
Sbjct: 142 QLGLPTALKKGVVTLLSDYEVCKEGDVLTPEQARILKLFGYEMAEFKVIIKXMWDAQ 198
>gi|336268444|ref|XP_003348987.1| mRNA turnover protein MRT4 [Sordaria macrospora k-hell]
gi|380094247|emb|CCC08464.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 255
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 123/233 (52%), Gaps = 29/233 (12%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + L++ KK +E KE + +IR ++ NY+ +VFS +NMRN K+ R+++
Sbjct: 1 MPKSKRAKVFNLTQVTKKNREQKEKLFENIRESIPNYQHCFVFSIDNMRNNYLKDVRKEL 60
Query: 61 KPSRLLW---------VGRYP--MRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
R+ + +G P + K+SK+L G+ GL TN +E++ F
Sbjct: 61 NDCRIFFGKTKLTARALGTTPEDAQADGLDKLSKYLAGSVGLIFTNRDPQEIKDYFVNLT 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQ------------FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR GS AT + +P GPL +H +EP LR+ GMP R+ KG V
Sbjct: 121 QVDFARAGSVATRTITIPSGPLFSTGGEVPAEHDVPVSHTLEPELRRLGMPTRMVKGKVC 180
Query: 158 L------VSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
L D+V+C+EG+ L R+L+L I ++ F++ L+ WSA E+
Sbjct: 181 LGDEAGEGDDYVICKEGETLDSRQTRLLKLFSICLSEFRVKLLAYWSASSGEV 233
>gi|393213452|gb|EJC98948.1| hypothetical protein FOMMEDRAFT_113538 [Fomitiporia mediterranea
MF3/22]
Length = 250
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 118/219 (53%), Gaps = 20/219 (9%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V+L+K KK KE K ++N I+ + ++ ++F MRN K R
Sbjct: 1 MPKSKRAKVVSLTKVAKKTKEQKASLINEIQENADKWRYCWLFEVGTMRNTHLKTVRSLW 60
Query: 61 KPSRLLWVGRYPM-----------RYSQA-YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K S ++ GR + Y Y ++K L G G+ T+ P EEV F+ +
Sbjct: 61 KDSARIFFGRCAVVAKALGSTPEEEYKPGLYNIAKQLKGQVGILFTDSPPEEVTEWFDDF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL--------EQFTHEMEPFLRKQGMPVRLNKGVVELVS 160
+ DFAR+G+ A++ V LPEGP+ E F H EP LRK G+ + +GV L +
Sbjct: 121 QQPDFARSGNIASQDVILPEGPVMQCHSNPPEPFPHNEEPQLRKLGLHTSMVRGVPTLNA 180
Query: 161 DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
VC +GK L+ E A++L+L+G KM F++HL RW A
Sbjct: 181 PHRVCTKGKELTAEQAQLLKLIGEKMVVFRVHLRARWDA 219
>gi|409042271|gb|EKM51755.1| hypothetical protein PHACADRAFT_262079 [Phanerochaete carnosa
HHB-10118-sp]
Length = 251
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 124/226 (54%), Gaps = 20/226 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V+L+K KK +E K ++ ++ + ++ ++F NMRN K R+
Sbjct: 1 MPKSKRAKLVSLTKVAKKTREQKGALITEVQENADKWQYCWLFEVGNMRNTHLKIVRKLW 60
Query: 61 KPSRLLWVGRYPMRYSQA------------YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K S ++ GR + K+++ + G GL T+ P EEV + F+ +
Sbjct: 61 KDSARIFFGRGAVMAKALGTTPEEEYKLGLQKIAQQIKGQVGLMFTDSPPEEVIAWFDDF 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQ--------FTHEMEPFLRKQGMPVRLNKGVVELVS 160
DFAR+G+ AT+ LP GP+ Q F H EP LRK G+ ++ +GV L +
Sbjct: 121 HPPDFARSGNRATQMFVLPAGPVMQQHSDPPEPFPHNEEPQLRKLGLHTKMVRGVPTLDT 180
Query: 161 DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYR 206
+CE+GK L+PE A++L+L+GIKM F++ L RWSA + E+ +
Sbjct: 181 PHTICEKGKVLTPEQAQLLKLIGIKMVEFRVALRARWSAANGEVVQ 226
>gi|85091761|ref|XP_959060.1| mRNA turnover protein MRT4 [Neurospora crassa OR74A]
gi|51316333|sp|Q7S302.1|MRT4_NEUCR RecName: Full=mRNA turnover protein 4 homolog
gi|28920457|gb|EAA29824.1| hypothetical protein NCU07547 [Neurospora crassa OR74A]
gi|336470128|gb|EGO58290.1| hypothetical protein NEUTE1DRAFT_82700 [Neurospora tetrasperma FGSC
2508]
gi|350290178|gb|EGZ71392.1| mRNA turnover protein 4 [Neurospora tetrasperma FGSC 2509]
Length = 252
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 121/233 (51%), Gaps = 29/233 (12%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + L++ KK +E KE + +IR + NY+ +VFS +NMRN K+ R+++
Sbjct: 1 MPKSKRAKVYNLTQVTKKNREQKEKLFENIRECIPNYQHCFVFSIDNMRNNYLKDVRKEL 60
Query: 61 KPSRLLW---------VGRYP--MRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
R+ + +G P + K+SK+L G+ GL TN E++ F
Sbjct: 61 NDCRIFFGKTKLTARALGTTPEDAQADGLDKLSKYLSGSVGLIFTNRDPSEIKDYFVNLT 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQ------------FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR GS AT + +P GPL +H +EP LR+ GMP R+ KG V
Sbjct: 121 QVDFARAGSVATRTITIPSGPLYSTGGEVPAEHDVPVSHTLEPELRRLGMPTRMVKGKVC 180
Query: 158 L------VSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
L D+V+C+EG+ L R+L+L I ++ F++ L+ WSA E+
Sbjct: 181 LGDEAGEGDDYVICKEGETLDSRQTRLLKLFSICLSEFRVKLLAYWSAASGEV 233
>gi|409079103|gb|EKM79465.1| hypothetical protein AGABI1DRAFT_74528 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 241
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 124/223 (55%), Gaps = 20/223 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + V+L+K KKGKEHK ++N I+ V+ ++ ++F N+RN REQ
Sbjct: 1 MPQSKRSKLVSLTKVAKKGKEHKSSLMNEIQENVDKWRYCWLFEVGNLRNSHLSTVREQW 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
+ + ++ G+ + R + +K++K + G G+ T+ +EV F +
Sbjct: 61 RGTARIFFGKGKVMAKALGLTPEEERCTGIHKLAKHIKGQVGIMFTDSEPQEVIDWFADF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL--------EQFTHEMEPFLRKQGMPVRLNKGVVELVS 160
+ DF R G+ A+ V LP GP+ E F H EP LRK G+ RLN+GV L +
Sbjct: 121 QRPDFGRAGNKASRTVILPAGPVMRTYSDPPEPFPHNEEPQLRKLGLATRLNRGVPTLDA 180
Query: 161 DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFE 203
VCEEG+ L+ E A++L+L+G +M F+++L+C + + E
Sbjct: 181 PHKVCEEGRELTAEQAQLLKLIGERMVMFRVNLLCHFDSATGE 223
>gi|224014312|ref|XP_002296819.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968674|gb|EED87020.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 220
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 125/214 (58%), Gaps = 13/214 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKS+R + V L+KT KK +EHK V+++R+A+++ +Y+FS+ENMR+ FK+ R
Sbjct: 1 MPKSRRAQRVALTKTAKKTREHKSNYVDTVRSAIDSNDRLYLFSYENMRSNHFKDVRLHF 60
Query: 61 K------PSRLLWV--GRYPM-RYS-QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYED 110
+ ++LL + GR YS +++SK L G+ G+ T+ ++VES F
Sbjct: 61 RGRLFLGKNKLLQIALGRSSEDEYSDNLHQLSKILSGSVGILCTSQSPKDVESYFANLAV 120
Query: 111 YDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVS---DFVVCEE 167
DFAR G TA + V L + +E M RK G+PV + G V V ++ VC+E
Sbjct: 121 EDFARAGQTAPQTVMLSQSQIETHPVSMVEQFRKLGLPVEVKNGRVAFVGGREEWEVCKE 180
Query: 168 GKPLSPESARILRLLGIKMATFKLHLICRWSAED 201
GK LS E +IL +G+K+A F++ L+CRW E+
Sbjct: 181 GKELSVEQCKILTHMGLKLAVFRIELVCRWEKEE 214
>gi|358056987|dbj|GAA97118.1| hypothetical protein E5Q_03793 [Mixia osmundae IAM 14324]
Length = 230
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 116/207 (56%), Gaps = 16/207 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR+ + L+KTKKK +E K ++ I+ A++ ++ +++F + RN +E R
Sbjct: 1 MPKSKRNTVLDLTKTKKKTREQKGALIEEIQLALDTFQFVWIFQVNHTRNQYIQEIRAAW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
KPS++ MR + + + + L GN GL T+ +EV F Y+
Sbjct: 61 KPSKIFMGRNGLMRKALGATAEDEHARGSAHIGQMLEGNVGLLFTDCTPKEVVEYFESYK 120
Query: 110 DYDFARTGSTATEKVELPEGPL----EQFTHEMEPFLRKQGMPVRLNKGVVELV-SDFVV 164
DFARTG+ ATE +ELP+GP+ E H +EP LRK GMP L +GV L F V
Sbjct: 121 KSDFARTGNLATETIELPQGPVLMEGEPAPHSIEPQLRKAGMPTSLIRGVPTLAGGGFTV 180
Query: 165 CEEGKPLSPESARILRLLGIKMATFKL 191
C+ G+ LSPE ++L+L MATF++
Sbjct: 181 CKAGQTLSPEQVQLLKLFNKPMATFQI 207
>gi|213407682|ref|XP_002174612.1| mRNA turnover protein MRT4 [Schizosaccharomyces japonicus yFS275]
gi|212002659|gb|EEB08319.1| mRNA turnover protein [Schizosaccharomyces japonicus yFS275]
Length = 242
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 117/220 (53%), Gaps = 23/220 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+S+R R VTL++T KKG++ K + +SI+ A++ ++ +VF NMRN K R+
Sbjct: 1 MPRSRRSRLVTLAQTDKKGRDGKVALYSSIQAALDEFEYAWVFDVANMRNTYLKRVRDDW 60
Query: 61 KPSRLLWVGRYPMRYSQAY-----------KVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR+ M + Y K++K L G+ GL T+ EEV+ F +
Sbjct: 61 KGSRIFMGKTKVMAKALGYTPEEEHAENVSKLTKLLHGSVGLLFTDSKPEEVKGYFESFV 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQ------------FTHEMEPFLRKQGMPVRLNKGVVE 157
D+AR G+ A V +PEGP+ H +EP +R+ GMP L GVV
Sbjct: 121 QNDYARAGAIAPFSVIIPEGPVYSRAGQIPVEDDILLAHTLEPQVRQLGMPTTLKNGVVT 180
Query: 158 LVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
L++DF + +EG+PL R+L+L GI A FK+ L+ +
Sbjct: 181 LLTDFTLAKEGEPLDSRQTRLLKLFGITAAEFKVKLLGYY 220
>gi|396476910|ref|XP_003840151.1| similar to mRNA turnover protein 4 homolog [Leptosphaeria maculans
JN3]
gi|312216722|emb|CBX96672.1| similar to mRNA turnover protein 4 homolog [Leptosphaeria maculans
JN3]
Length = 235
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 115/221 (52%), Gaps = 23/221 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V L+KT KKGKE + +++ A +NY I+VFS ENMRN KE R++
Sbjct: 1 MPKSKRAKVVHLTKTDKKGKELSLKLFANVQEAADNYGHIFVFSVENMRNSYLKEVRQEF 60
Query: 61 KPSRLLW---------VGRYPM--RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
SR + +G+ P + K++++L GN GL TN E+ F Y
Sbjct: 61 ADSRFFFGKTKVMAKALGQTPAEEHLTNLSKLTEYLTGNVGLLFTNRAPSEIIEYFATYS 120
Query: 110 DYDFARTGSTATEKV------------ELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G AT+ ELPE H +E +RK GMP RL +G +
Sbjct: 121 QTDFARAGVVATQTFTVPAGVVYSRGGELPEDDDVPLPHSVETTVRKWGMPTRLVQGKIV 180
Query: 158 LVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
L + + VCEEGK ++ +L++ G+ MA FK+ L ++
Sbjct: 181 LDAPYTVCEEGKVMNSHQTALLKMFGVAMADFKIDLKAYYT 221
>gi|426196012|gb|EKV45941.1| hypothetical protein AGABI2DRAFT_207369 [Agaricus bisporus var.
bisporus H97]
Length = 241
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 123/223 (55%), Gaps = 20/223 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + V+L+K KKGKEHK ++N I+ V+ ++ ++F N+RN REQ
Sbjct: 1 MPQSKRSKLVSLTKVAKKGKEHKSSLMNEIQENVDKWRYCWLFEVGNLRNSHLSTVREQW 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
+ + ++ G+ + R + +K++K + G G+ T+ +EV F +
Sbjct: 61 RGTARIFFGKGKVMAKALGLTPEEERCTGIHKLAKHIKGQVGIMFTDSEPQEVIDWFADF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL--------EQFTHEMEPFLRKQGMPVRLNKGVVELVS 160
+ DF R G+ A+ V LP GP+ E F H EP LRK G+ RLN+GV L +
Sbjct: 121 QRPDFGRAGNKASRTVILPAGPVMRTYSDPPEPFPHNEEPQLRKLGLTTRLNRGVPTLDA 180
Query: 161 DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFE 203
VCEEG+ L+ E A++L+L+G +M F++ L+C + + E
Sbjct: 181 PHKVCEEGRELTAEQAQLLKLIGERMVMFRVSLLCHFDSATGE 223
>gi|451851636|gb|EMD64934.1| hypothetical protein COCSADRAFT_88975 [Cochliobolus sativus ND90Pr]
Length = 235
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 116/221 (52%), Gaps = 23/221 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V L+KT KKGKE + +++ A +N++ I+VF+ ENMRN KE R +
Sbjct: 1 MPKSKRAKVVHLTKTDKKGKELSLKLFANVQEAADNFEHIFVFAVENMRNSYLKEVRAEF 60
Query: 61 KPSRLLW---------VGRYPM--RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
SR + +G+ P + ++++ L GN GL TN E+ F Y
Sbjct: 61 ADSRFFFGKTKVMAKALGQTPAEEHLTNLSQLTEHLNGNVGLLFTNREPSEIIEYFANYS 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G AT+ +P G P E H ME +RK GMP RL+KG +
Sbjct: 121 QTDFARAGVVATQTFTVPAGIVYSRGGELPEEDDVPLPHSMETTIRKWGMPTRLDKGKII 180
Query: 158 LVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
L + + + EEGKP++ +L+L G+ MA FK+ L +S
Sbjct: 181 LDAPYTIAEEGKPMNSHQTALLKLFGVAMADFKIDLKAYYS 221
>gi|451995576|gb|EMD88044.1| hypothetical protein COCHEDRAFT_1143898 [Cochliobolus
heterostrophus C5]
Length = 235
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 116/221 (52%), Gaps = 23/221 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V L+KT KKGKE + +++ A +N++ I+VF+ ENMRN KE R +
Sbjct: 1 MPKSKRAKVVHLTKTDKKGKELSLKLFANVQEAADNFEHIFVFAVENMRNSYLKEVRAEF 60
Query: 61 KPSRLLW---------VGRYPM--RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
SR + +G+ P + ++++ L GN GL TN E+ F Y
Sbjct: 61 ADSRFFFGKTKVMAKALGQTPAEEHLTNLSQLTEHLNGNVGLLFTNREPSEIIEYFANYS 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G AT+ +P G P E H ME +RK GMP RL+KG +
Sbjct: 121 QTDFARAGVVATQTFTVPAGVVYSRGGELPEEDDVPLPHSMETTIRKWGMPTRLDKGKII 180
Query: 158 LVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
L + + + EEGKP++ +L+L G+ MA FK+ L +S
Sbjct: 181 LDAPYTIAEEGKPMNSHQTALLKLFGVAMADFKIDLKAYYS 221
>gi|170089957|ref|XP_001876201.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649461|gb|EDR13703.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 252
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 124/236 (52%), Gaps = 22/236 (9%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V+L+K KK KEHK ++N ++ E ++ ++F MRN K R+
Sbjct: 1 MPKSKRSKVVSLTKVSKKTKEHKNAMINELQTNAEKWRYCWLFEVGAMRNSHLKTVRKLW 60
Query: 61 KPSRLLWVGRYPMRYSQA------------YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K S ++ GR + +K++K + G GLF T+ +EV F +
Sbjct: 61 KDSARMFFGRGAVMAKALGTTLEEEHRVGLHKLAKQIKGQVGLFFTDTEPQEVIEWFADF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL--------EQFTHEMEPFLRKQGMPVRLNKGVVELVS 160
+ DFAR G+ A+ V LP GP+ E F H EP LRK G+ +N+GV L +
Sbjct: 121 QQPDFARAGNIASRTVILPLGPVMRHHSDPPEPFPHNEEPQLRKLGLTTSMNRGVPTLTA 180
Query: 161 DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVES 216
+C +GK L+ E A++L+L+G KM F++ LI RW + E+ E +D + S
Sbjct: 181 PHKLCTQGKVLTAEQAQLLKLIGEKMVVFRVGLIARWDSTSGEV--EQIDNPRISS 234
>gi|148681359|gb|EDL13306.1| RIKEN cDNA 2610012O22, isoform CRA_d [Mus musculus]
Length = 192
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 98/167 (58%), Gaps = 17/167 (10%)
Query: 48 MRNLKFKEFREQIKPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFL 93
MRN K K+ R K SR+ + +GR P S YK VSK L G GL
Sbjct: 1 MRNSKLKDIRNAWKHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKKLRGEVGLLF 57
Query: 94 TNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNK 153
TN KEEV F KY + DFAR G+ AT V L GPL+QF H MEP LR+ G+P L K
Sbjct: 58 TNRTKEEVNEWFTKYTEMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKK 117
Query: 154 GVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
GVV L+SD+ VC+EG L+PE ARIL+L G +MA FK+ + W A+
Sbjct: 118 GVVTLLSDYEVCKEGDVLTPEQARILKLFGYEMAEFKVIIKYMWDAQ 164
>gi|157821625|ref|NP_001100167.1| mRNA turnover protein 4 homolog [Rattus norvegicus]
gi|149024421|gb|EDL80918.1| rCG31507, isoform CRA_a [Rattus norvegicus]
Length = 193
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/167 (47%), Positives = 98/167 (58%), Gaps = 17/167 (10%)
Query: 48 MRNLKFKEFREQIKPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFL 93
MRN K K+ R K SR+ + +GR P S YK VSK L G GL
Sbjct: 1 MRNSKLKDIRNAWKHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKKLRGEVGLLF 57
Query: 94 TNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNK 153
TN KEEV F KY + DFAR G+ AT V L GPL+QF H MEP LR+ G+P L K
Sbjct: 58 TNRTKEEVNEWFTKYTEMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKK 117
Query: 154 GVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
GVV L+SD+ VC+EG L+PE AR+L+L G +MA FK+ + W A+
Sbjct: 118 GVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDAQ 164
>gi|328770176|gb|EGF80218.1| hypothetical protein BATDEDRAFT_88631 [Batrachochytrium
dendrobatidis JAM81]
Length = 221
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 123/221 (55%), Gaps = 20/221 (9%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + L+K KKGK KE + N IR +V+ Y IYVF NMRN+ KE R
Sbjct: 1 MPKSKRSKIYNLTKADKKGKPAKENLFNEIRESVDKYAYIYVFEVMNMRNVYLKEVRNDW 60
Query: 61 KPSRLLWVGRYPMRYS-------QAYK-----VSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SR +++GR + YK +S L G+ GL TN EEV+ F
Sbjct: 61 SGSR-IFLGRNRVMAKALGTTEESEYKLNLRELSLKLVGDVGLLFTNSTPEEVKKYFEGK 119
Query: 109 EDYDFARTGSTATEKVELPEGPLEQ----FTHEMEPFLRKQGMPVRLNKGVVELVSDFVV 164
++ D+AR+G+ A ++ +P+GP+ + F + MEP LR GMP L GV++L S + +
Sbjct: 120 KESDYARSGTIAESEIIIPQGPVMRGELNFPNNMEPHLRSLGMPTMLVNGVIQLASPYTI 179
Query: 165 CEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELY 205
C++G L+PE A +L+ G +A F H+I ++ D E+Y
Sbjct: 180 CKKGATLTPEQAHLLKHFGFHLAEF--HIIPKYYYHD-EVY 217
>gi|146184766|ref|XP_001030087.2| hypothetical protein TTHERM_01151550 [Tetrahymena thermophila]
gi|146142757|gb|EAR82424.2| hypothetical protein TTHERM_01151550 [Tetrahymena thermophila
SB210]
Length = 232
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 121/222 (54%), Gaps = 26/222 (11%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V L+K KK HK+ I N + V+ Y +IYVFS ENM + F+E + Q
Sbjct: 1 MPKSKRSKVVALTKVKKDATGHKQKIQNKLNECVQKYDNIYVFSHENMTTIPFREIQAQW 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVE------ 102
SR ++G+ + + + +++ + G+ GL TN EEV+
Sbjct: 61 SDSRF-FLGKNKVMQIVLGKDSDSEQLDNLHYLTEQIKGDCGLLFTNKTYEEVKKQLTFF 119
Query: 103 -----SLFNKYEDYDFARTGSTATEKVELPEGP--LEQFTHEMEPFLRKQGMPVRLNKGV 155
S F+ Y +FA+ G A E + L + F H M+ +LRK G+ V L G+
Sbjct: 120 IYELSSFFDSYGCEEFAKAGHVANETIILQKDSDVFNTFAHTMDVYLRKLGVDVILQNGI 179
Query: 156 VELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ L S+FV+C+EGKP++ E A++L+LLG K+A FK+ L C +
Sbjct: 180 LNLQSNFVLCQEGKPINTEQAKLLKLLGYKIAQFKIELKCCY 221
>gi|395331170|gb|EJF63552.1| mRNA turnover protein 4-like protein [Dichomitus squalens LYAD-421
SS1]
Length = 248
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 118/224 (52%), Gaps = 20/224 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V+L+K KK +E K ++ ++ + ++ ++F NMRN K R+
Sbjct: 1 MPKSKRSKVVSLTKVAKKTREDKNALLAEVQENADKWQYCWLFEVGNMRNAHLKTVRKLW 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + ++ GR + +K++ + G GLF T+ P EV F +
Sbjct: 61 KDTARMFFGRGAVMAKALGTTPAEEHRPGLHKLATQIRGQVGLFFTDSPPAEVLEWFADF 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQ--------FTHEMEPFLRKQGMPVRLNKGVVELVS 160
DFAR G+ A V LP GP+ Q F H EP LR+ G+ R+ +GV L +
Sbjct: 121 AQPDFARAGNRAARTVVLPAGPVMQQHAQPPEPFPHNEEPQLRRLGLRTRMERGVPTLDA 180
Query: 161 DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
VCE+G+ L+PE A++L+L+GI+M TFK+ L RW A E+
Sbjct: 181 PHTVCEKGRALTPEQAQLLKLVGIRMVTFKVGLRARWDAATGEV 224
>gi|406866558|gb|EKD19598.1| hypothetical protein MBM_02835 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 235
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 118/231 (51%), Gaps = 23/231 (9%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V LS+ +KKGKE + ++R ++ Y+ +VF +NMRN K R
Sbjct: 1 MPKSKRAKVVHLSQVQKKGKELTLKLFANVRECLDEYQHCFVFRVDNMRNTYLKAVRNDF 60
Query: 61 KPSRLLW---------VGRYPMRYSQ--AYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
+ SRL + +G P Q + +SK+L GN GL TN V+ F++
Sbjct: 61 QDSRLFFGKTKVMAKALGSTPEDEYQPSTHLLSKYLTGNVGLLFTNREPSAVKEYFSQMA 120
Query: 110 DYDFARTGSTATEKVELPEGPL---------EQ---FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G+TAT E+P G + EQ H +EP LRK +P L KG +
Sbjct: 121 KTDFARAGTTATRSFEIPAGVVYSMGGEIDQEQDVPMAHSLEPELRKLNVPTSLTKGKIT 180
Query: 158 LVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREG 208
L + ++VC+EG L R+L+L G+ + F + L+ WSA E+ G
Sbjct: 181 LENPYLVCKEGHVLDSRQTRLLKLFGVATSEFTVQLVAYWSAATHEIIEVG 231
>gi|115899403|ref|XP_784045.2| PREDICTED: mRNA turnover protein 4 homolog [Strongylocentrotus
purpuratus]
Length = 340
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 99/165 (60%), Gaps = 11/165 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKS+RD+ ++L++TKKKG E K+ ++ +R++V+ Y I +FS ENMRN K K+ R
Sbjct: 1 MPKSRRDKRISLTRTKKKGLETKQNLIEEVRDSVDKYARIVIFSVENMRNSKIKDVRNSW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR + M + ++VSK L GN GL TN K+EV F +
Sbjct: 61 KHSRFFFGKNKVMMVALGKSAEEEYRDNLHRVSKRLMGNVGLLFTNKTKDEVVKFFEGFV 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKG 154
+ D+AR+G+ ATE V LPEGPLE F H MEP LR+ +P L KG
Sbjct: 121 EADYARSGNIATETVVLPEGPLEDFQHSMEPQLRQLHLPTSLKKG 165
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 87/147 (59%), Gaps = 10/147 (6%)
Query: 79 YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEM 138
++VSK L GN GL TN K+EV F + + D+AR+G+ ATE V LPEGPLE F H M
Sbjct: 192 HRVSKRLMGNVGLLFTNKTKDEVVKYFEGFVEADYARSGNVATETVVLPEGPLEDFQHSM 251
Query: 139 EPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
EP LR+ +P L KG++ L S+ VC+ G L+PE ARIL+L MA FKL L WS
Sbjct: 252 EPQLRQLNLPTSLKKGIIHLTSEHTVCKVGDTLTPEQARILKLFAKPMAEFKLKLAASWS 311
Query: 199 ----------AEDFELYREGLDESDVE 215
A D + +G D+ DVE
Sbjct: 312 NNGAFEVFDDAPDSKSRSDGDDDEDVE 338
>gi|344256955|gb|EGW13059.1| mRNA turnover protein 4-like [Cricetulus griseus]
Length = 188
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 117/222 (52%), Gaps = 49/222 (22%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K S++ + +GR P S+ YK VSK L G GL TN KEE
Sbjct: 61 KHSQMFFNKNKLVMVALGRSP---SEEYKDNLHQVSKKLRGEVGLLFTNCKKEE------ 111
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
QF H MEP LR+ G+P L KGVV L+SD+ VC+
Sbjct: 112 --------------------------QFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCK 145
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREG 208
EG L+PE A +L+L G +MA FK+ + W A+ ++ +G
Sbjct: 146 EGDVLTPEQASVLKLFGYEMAEFKVTIKYMWDAQSGKVPADG 187
>gi|148681357|gb|EDL13304.1| RIKEN cDNA 2610012O22, isoform CRA_b [Mus musculus]
Length = 168
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 99/169 (58%), Gaps = 17/169 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGV 155
KY + DFAR G+ AT V L GPL+QF H MEP LR+ G+P L K V
Sbjct: 118 KYTEMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKAV 166
>gi|403367523|gb|EJY83585.1| hypothetical protein OXYTRI_18686 [Oxytricha trifallax]
Length = 234
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 119/208 (57%), Gaps = 13/208 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR++ V+L+K K+KG+E KE +V + AVE YK+ +V F+NMR FK + +
Sbjct: 1 MPKSKRNKIVSLTKVKRKGREAKEELVEKVHEAVEKYKNCFVLQFDNMRTGPFKNIQNAL 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
+ S+ M+ S + +SK+L G L T+ ++E++
Sbjct: 61 RDSKFFLGKNKVMQVSLGKSPETEPADNTHLISKYLRGQVCLLFTDRTEKEIQKFIEDNR 120
Query: 110 DYDFARTGSTATEKVELPEG--PLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEE 167
D+A+ G+ AT V L +G L+ + H MEP+LR+ G+P +LN +EL++D VC E
Sbjct: 121 LPDYAKAGTKATFTVFLEKGVQALDAYGHGMEPYLRQLGLPTKLNMQKIELLADTYVCRE 180
Query: 168 GKPLSPESARILRLLGIKMATFKLHLIC 195
G+ LS E +IL+LLG +MA F + ++
Sbjct: 181 GEELSVEQCKILKLLGHQMAKFNMIILA 208
>gi|405118522|gb|AFR93296.1| hypothetical protein CNAG_03789 [Cryptococcus neoformans var.
grubii H99]
Length = 245
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 123/235 (52%), Gaps = 23/235 (9%)
Query: 1 MPKSKRDRPVTLSKTK-KKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKR R TLSKT + K K+ +VN IR V+ Y ++FS +MRN KE R Q
Sbjct: 1 MPKSKRSRLTTLSKTPIRSTKASKQALVNEIRENVDKYDYCWMFSVGDMRNDGLKEVRAQ 60
Query: 60 IKPSRLLWVGRYPM-----------RYSQAY-KVSKFLCGNTGLFLTNMPKEEVESLFNK 107
+ + + G+ + Y +++K L G GLF T+ P +E F+
Sbjct: 61 WRGTGRFFFGKGKVMAKALGDTPETEYQDGLSQIAKRLKGQIGLFFTSHPVDETVEWFDS 120
Query: 108 YEDYDFARTGSTATEKVELPEGPL----------EQFTHEMEPFLRKQGMPVRLNKGVVE 157
+ ++AR G+ +T + LP GPL + F H MEP LR G+ L +G+
Sbjct: 121 WHKPEYARMGAKSTMDITLPAGPLLTPFTEPPSGDPFPHSMEPQLRALGLTTSLVRGIPS 180
Query: 158 LVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDES 212
L + V+C +G+ L+ E RIL+LL I+MA F++HL RWS E + + LDE
Sbjct: 181 LNNPHVLCVKGEKLTSEKCRILKLLAIQMADFRIHLGSRWSKESGFVEGKELDEG 235
>gi|58264330|ref|XP_569321.1| ribosomal protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134108204|ref|XP_777053.1| hypothetical protein CNBB2850 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259738|gb|EAL22406.1| hypothetical protein CNBB2850 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223971|gb|AAW42014.1| ribosomal protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 245
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 123/235 (52%), Gaps = 23/235 (9%)
Query: 1 MPKSKRDRPVTLSKTK-KKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKR + TLSKT + K K+ +VN IR V+ Y ++FS +MRN KE R Q
Sbjct: 1 MPKSKRSKLTTLSKTPVRSTKASKQALVNEIRENVDKYDYCWMFSVGDMRNDGLKEVRAQ 60
Query: 60 IKPSRLLWVGRYPM-----------RYSQAY-KVSKFLCGNTGLFLTNMPKEEVESLFNK 107
+ + + G+ + Y +++K L G GLF T+ P +E F+
Sbjct: 61 WRGTGRFFFGKGKVMAKALGETPETEYQDGLSQIAKRLKGQIGLFFTSHPVDETVEWFDS 120
Query: 108 YEDYDFARTGSTATEKVELPEGPL----------EQFTHEMEPFLRKQGMPVRLNKGVVE 157
+ ++AR G+ +T + LP GPL + F H MEP LR G+ L +G+
Sbjct: 121 WHKPEYARMGAKSTMDITLPAGPLLTPFTEPPSGDPFPHSMEPQLRALGLTTSLVRGIPS 180
Query: 158 LVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDES 212
L + V+C +G+ LS E RIL+LL I+MA F++HL RWS E + + LDE
Sbjct: 181 LNNPHVLCVKGEKLSSEKCRILKLLAIQMADFRIHLGSRWSKESGFVEGKELDEG 235
>gi|345570967|gb|EGX53782.1| hypothetical protein AOL_s00004g441 [Arthrobotrys oligospora ATCC
24927]
Length = 238
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 118/227 (51%), Gaps = 23/227 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR++ ++L+KT+KKG+E+ I ++IR A++ + ++VFS +MRN + KE R +
Sbjct: 1 MPKSKRNKLISLTKTQKKGRENNVRIFDAIRAALDEHSFVWVFSVASMRNAQLKEVRAEF 60
Query: 61 KPSRL-----------LWVGRYPMRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
+ SR+ L R K+SK + G GL LTN E V F+ +
Sbjct: 61 QDSRIFFGKTKVMIKALGTTREDEYRDNLSKLSKHMNGEVGLLLTNRTPEAVTEFFDSFS 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQ------------FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G+ + +P G + H +E +R GMP RL G V
Sbjct: 121 AMDFARAGAVSPLTFTVPAGTVYSRGGEIAEEDDLPLAHSLETTVRGLGMPTRLVNGKVT 180
Query: 158 LVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
L ++ VC+EG L+ + R+L+L G+ + FK+ L WS+ D E+
Sbjct: 181 LNEEYTVCKEGDVLNSQQTRLLKLFGVVTSEFKVKLSAYWSSADSEV 227
>gi|149024423|gb|EDL80920.1| rCG31507, isoform CRA_c [Rattus norvegicus]
Length = 169
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 99/170 (58%), Gaps = 17/170 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
K SR+ + +GR P S YK VSK L G GL TN KEEV F
Sbjct: 61 KHSRMFFGKNKVMMVALGRSP---SDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFT 117
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVV 156
KY + DFAR G+ AT V L GPL+QF H MEP LR+ G+P L K V
Sbjct: 118 KYTEMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKEAV 167
>gi|336369989|gb|EGN98330.1| hypothetical protein SERLA73DRAFT_183279 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382746|gb|EGO23896.1| hypothetical protein SERLADRAFT_470348 [Serpula lacrymans var.
lacrymans S7.9]
Length = 270
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 122/226 (53%), Gaps = 20/226 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V+L++ KK +EHK ++ ++ E +K ++F MRN K R+
Sbjct: 1 MPKSKRAQLVSLTQVSKKTREHKNALLEEVQKNAEKWKYCWLFEVGAMRNAHLKIVRKLW 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + ++ GR + +K++K + G GLF T+ +EV F+ +
Sbjct: 61 KDTARIFFGRGAVMAKALGTTLEEEHREGLHKLAKQIKGQVGLFFTDSEPQEVIEWFDDF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL--------EQFTHEMEPFLRKQGMPVRLNKGVVELVS 160
DFAR+G+ AT V LP GP+ E F H EP LRK G+ + +GV L +
Sbjct: 121 RQPDFARSGNIATRTVILPAGPVMRVHSDPPEPFPHNEEPQLRKLGLTTSMKRGVPTLEA 180
Query: 161 DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYR 206
+CE+GK LSPE ++L+L+G KM F++ L+ RW +E+ E+ +
Sbjct: 181 PHKLCEKGKVLSPEQTQLLKLVGEKMVVFRVALLARWDSENGEVTQ 226
>gi|392576324|gb|EIW69455.1| hypothetical protein TREMEDRAFT_44005 [Tremella mesenterica DSM
1558]
Length = 245
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 121/224 (54%), Gaps = 23/224 (10%)
Query: 1 MPKSKRDRPVTLSKTK-KKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKR + TLSKT + K K +VN +R+ V+N+ +++FS +MRN K+ R Q
Sbjct: 1 MPKSKRAKVTTLSKTPLRSTKASKASLVNELRSQVDNFPHVWLFSVGDMRNEGLKDVRGQ 60
Query: 60 IKPSRLLWVGRYPMRYS------------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNK 107
+ + + G+ + + +++ + G GLFLTN P +E F
Sbjct: 61 WRGTGRFFFGKGKVMAKALGDSPEDEYQPDLHLLARCIRGPVGLFLTNFPVDETREWFET 120
Query: 108 YEDYDFARTGSTATEKVELPEGPL----------EQFTHEMEPFLRKQGMPVRLNKGVVE 157
+ ++AR G+ AT+ + LP GP+ + F H MEP LR G+ L +GV
Sbjct: 121 WSKKEYARMGAKATQTITLPAGPILSPHTDPPTGDPFPHSMEPQLRALGLSTTLVRGVPS 180
Query: 158 LVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAED 201
L ++C++G+ LS E R+L+LLGI+MA F++ L RWS ++
Sbjct: 181 LNHAHILCQQGEKLSSEQCRLLKLLGIQMAEFRILLGSRWSKDE 224
>gi|164658856|ref|XP_001730553.1| hypothetical protein MGL_2349 [Malassezia globosa CBS 7966]
gi|159104449|gb|EDP43339.1| hypothetical protein MGL_2349 [Malassezia globosa CBS 7966]
Length = 306
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 121/219 (55%), Gaps = 22/219 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
M ++KR + V+L+KTK K +E+KE V ++R A Y I++F+ NMRN E R
Sbjct: 1 MARTKRAKVVSLTKTKAKTRENKENFVENVREAANQYAYIWIFAVSNMRNAYLGEVRRLW 60
Query: 61 KPSRLLWVGRYPMRYSQAY-------------KVSKFLCGNTGLFLTNMPKEEVESLFNK 107
S++ + G+ + ++A +VS+ L GN GL +T+ P EV N
Sbjct: 61 TGSKIFF-GKLRV-IAKALGETTEEEIRPGLGQVSQRLRGNVGLLMTDSPPAEVLDWCND 118
Query: 108 YEDYDFARTGSTATEKVELPEGPL-------EQFTHEMEPFLRKQGMPVRLNKGVVELVS 160
Y +FAR G+ ATE + LP GP+ E H +EP LR GMP +L +G L+
Sbjct: 119 YRRIEFARMGNRATETIILPPGPIYCRSNPPETLPHNLEPQLRALGMPTQLKRGEPTLLE 178
Query: 161 DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
+F VC +G+ LS E A+IL+ L ++MA F+L + WSA
Sbjct: 179 EFTVCRKGEKLSAEKAQILKHLFVQMAHFRLIPLAYWSA 217
>gi|403161337|ref|XP_003321692.2| hypothetical protein PGTG_03229 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171226|gb|EFP77273.2| hypothetical protein PGTG_03229 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 235
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 114/217 (52%), Gaps = 20/217 (9%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR V LSKT KK KE K ++ I+ A EN++ +++F+ +++R ++ R
Sbjct: 1 MPKSKRQTIVHLSKTSKKTKEVKAKLIEQIKEASENFQFVWLFTVDHVRTAYLQDIRSSW 60
Query: 61 KPSRLLWVGRYPMRYSQAYK-----------VSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
KPSR+ MR K + K L G+TGL TN P + V F+ Y
Sbjct: 61 KPSRIFMGRNAVMRLGLGSKEEDEHMPGLGAIGKLLEGDTGLLFTNEPPKVVVEWFDDYV 120
Query: 110 DYDFARTGSTATEKVELPEGP--LEQFTHE-------MEPFLRKQGMPVRLNKGVVELVS 160
D+AR G+ ATE VELP GP +++ E +EP LR G+P L + L S
Sbjct: 121 KADYARKGNLATETVELPAGPVMIKEINDEPSVAAGALEPHLRALGLPTTLQSRIPTLSS 180
Query: 161 DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
VVC+EG+ L A +L+ LG +MA FK+ L W
Sbjct: 181 PHVVCKEGEKLDTNQAGLLKTLGYQMAQFKIVLSHVW 217
>gi|302916127|ref|XP_003051874.1| mRNA turnover protein MRT4 [Nectria haematococca mpVI 77-13-4]
gi|256732813|gb|EEU46161.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 242
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 120/233 (51%), Gaps = 29/233 (12%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V L++ KK +E+K+ + +IRN + Y++ +VFS +NMRN KE R ++
Sbjct: 1 MPKSKRAKVVHLTQVSKKTRENKDKLFENIRNEIPEYQTCFVFSVDNMRNSYLKEVRREL 60
Query: 61 KPSRLLW---------VGRYP--MRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
RL + +G+ P ++K L G GL LTN P EE+ + F+
Sbjct: 61 SDCRLFFGKTKLMAKALGQTPEEAIAPGIEGITKHLAGTVGLLLTNRPAEEILAYFDNLA 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G A+ LP G P E H +EP LR+ G+P R+ KG V
Sbjct: 121 PVDFARAGVAASRGFSLPAGVLYATGGEVPAEHDVPLEHTIEPELRRLGVPTRMVKGRVV 180
Query: 158 LVS------DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
L D+VVC+EG L R+L+L + ++ FK+ ++ WSA E+
Sbjct: 181 LGDESGEGEDYVVCKEGDILDSRQTRLLKLFSVCLSEFKVKVLAYWSAATSEV 233
>gi|440635763|gb|ELR05682.1| hypothetical protein GMDG_07525 [Geomyces destructans 20631-21]
Length = 240
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 118/223 (52%), Gaps = 23/223 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V L++ KKGKE + +++ +++ Y+ I+VFS +NMRN K+ R +
Sbjct: 1 MPKSKRAKVVHLTQVDKKGKELTLKLFANVQESIDKYQYIFVFSVDNMRNTYLKKVRADL 60
Query: 61 KPSRLLW---------VGRYPMRYSQA--YKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
SRL + +G P Q + ++ +L GN GL T+ E+V + F
Sbjct: 61 SDSRLFFGKTKVMAKALGSTPETAYQTNTHLLAPYLAGNVGLLFTDRSPEDVSAHFAANT 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQF------------THEMEPFLRKQGMPVRLNKGVVE 157
DFAR G+ AT + +PEG + H +EP LR+ +P L+KG +
Sbjct: 121 PTDFARAGTPATRRFAIPEGIVYSLGGEVAAEDDVPMAHGLEPELRRLNVPTSLSKGNIT 180
Query: 158 LVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
L +++ VC EG+ L R+L+L G+ A F++ ++ WSAE
Sbjct: 181 LQNEYEVCREGQVLDSRQTRLLKLFGVATAEFRVRVVAYWSAE 223
>gi|219117724|ref|XP_002179652.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408705|gb|EEC48638.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 220
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 124/217 (57%), Gaps = 22/217 (10%)
Query: 10 VTLSKTKKKG-KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIK------P 62
V L++T+K+ +EHK + +R +V+ +KS+Y+FS+ENMR+ KFK+ R + P
Sbjct: 2 VALTQTEKRATREHKSAFIKDVRESVDKHKSLYLFSYENMRSNKFKDVRRHFRGTAKEEP 61
Query: 63 SRL---------LWVGRYPMR-YSQAYK-VSKFLCGN-TGLFLTNMPKEEVESLFNKYED 110
SR+ L +GR P YS + V+K + G G+ T+ + +VE F+ Y +
Sbjct: 62 SRIFLGKNKLLQLALGRTPEEEYSDNLRHVAKRITGGCVGVLSTSRSRNDVEGYFSSYSE 121
Query: 111 YDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVV---ELVSDFVVCEE 167
DFAR GS + +V + G L+ F M RK GMPV + G V + VS+F +C+E
Sbjct: 122 PDFARAGSVSPREVLVNSGMLDAFPVSMMEQFRKLGMPVEIQNGKVVFRDGVSEFRICKE 181
Query: 168 GKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
G+ LS E ++L GIK+ FK+ L+CRW +FEL
Sbjct: 182 GETLSAEKCKLLVHFGIKITNFKVGLVCRWENGEFEL 218
>gi|189199998|ref|XP_001936336.1| mRNA turnover protein MRT4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187983435|gb|EDU48923.1| mRNA turnover protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 235
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 114/221 (51%), Gaps = 23/221 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V L+KT KKGKE + +++ A +NY+ ++VF+ ENMRN K+ R +
Sbjct: 1 MPKSKRAKVVHLTKTDKKGKELSLKLFANVQEAADNYEHVFVFAVENMRNSYLKDVRAEF 60
Query: 61 KPSRLLW---------VGRYPM--RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
SR + +G+ P + +++K L GN GL T+ E+ F+ Y
Sbjct: 61 SDSRFFFGKTKVMAKALGQTPAEEHLTNLSELTKHLNGNVGLLFTSRDPSEIIDYFSAYS 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQ------------FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G AT+ +P G + H ME +RK GMP RL +G +
Sbjct: 121 KTDFARAGVVATQTFTVPAGVVHSRGGEVPEDEDVPLPHSMETTIRKWGMPTRLQQGKIV 180
Query: 158 LVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
L + + + EEGK ++ +L++ G+ MA FK+ L +S
Sbjct: 181 LDAPYTIAEEGKVMNSHQTALLKMFGVAMADFKIDLKAYYS 221
>gi|19112513|ref|NP_595721.1| mRNA turnover and ribosome assembly protein Mrt4 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|51316543|sp|Q9USZ6.1|MRT4_SCHPO RecName: Full=mRNA turnover protein 4 homolog
gi|6165479|emb|CAB59805.1| mRNA turnover and ribosome assembly protein Mrt4 (predicted)
[Schizosaccharomyces pombe]
Length = 241
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 114/221 (51%), Gaps = 23/221 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKS+R + +TL++T+KKG E K + + ++ +++++ +++F NMRN K R+
Sbjct: 1 MPKSRRSKVLTLAQTEKKGHEGKAALFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDW 60
Query: 61 KPSRLLW---------VGRYPM--RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR+ +G P K++K L G GL TN +EV F +
Sbjct: 61 KGSRIFMGKTKVMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPDEVIGYFESFV 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQ------------FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G+ A +P GP+ TH +EP +R+ GMP L GVV
Sbjct: 121 QNDFARAGAVAPFTHVIPAGPVYSRAGQIPVEDDILLTHTLEPQVRQLGMPTVLKNGVVT 180
Query: 158 LVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
L++DF +C EG+ L R+L+L GI A FK+ L+ +S
Sbjct: 181 LLADFPLCTEGQQLDSRQTRLLKLFGITAAEFKVGLLGYYS 221
>gi|321251805|ref|XP_003192184.1| ribosomal protein [Cryptococcus gattii WM276]
gi|317458652|gb|ADV20397.1| Ribosomal protein, putative [Cryptococcus gattii WM276]
Length = 245
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 121/235 (51%), Gaps = 23/235 (9%)
Query: 1 MPKSKRDRPVTLSKTK-KKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKR + TLSKT + K K+ +VN IR V+ Y ++FS +MRN KE R Q
Sbjct: 1 MPKSKRSKLTTLSKTPIRSTKASKQALVNEIRENVDKYDYCWMFSVGDMRNDGLKEVRAQ 60
Query: 60 IKPSRLLWVGRYPM-----------RYSQAY-KVSKFLCGNTGLFLTNMPKEEVESLFNK 107
+ + + G+ + Y +++K L G G+F T+ P +E F
Sbjct: 61 WRGTGRFFFGKGKVMAKALGDTPETEYQDGLSQIAKRLKGQIGIFFTSHPVDETVEWFES 120
Query: 108 YEDYDFARTGSTATEKVELPEGPL----------EQFTHEMEPFLRKQGMPVRLNKGVVE 157
+ ++AR G+ +T + LP GPL + F H MEP R G+ L +G+
Sbjct: 121 WHKPEYARMGAKSTMDITLPAGPLLTPFTDPPSGDPFPHSMEPQFRALGLTTSLVRGIPS 180
Query: 158 LVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDES 212
L + V+C +G+ LS E RIL+LL I+MA F++HL RWS E + + LDE
Sbjct: 181 LNNPHVLCVKGEKLSSEKCRILKLLAIQMADFRIHLGSRWSKESGFVEGKELDEG 235
>gi|392591687|gb|EIW81014.1| hypothetical protein CONPUDRAFT_123878 [Coniophora puteana
RWD-64-598 SS2]
Length = 248
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 118/228 (51%), Gaps = 20/228 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + V+L+K KK +E K ++ ++ +E +K ++F MRN K R+
Sbjct: 1 MPRSKRAKIVSLTKVAKKTREDKSTLIEEVQQNIEKWKYCWLFEVGAMRNAYLKTVRKLW 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K S ++ GR + +K++K + G GL T+ EV F+ +
Sbjct: 61 KDSARIFFGRGAVMAKALGTTVEEEHRPGLHKLAKQIKGQVGLLFTDSEPSEVTEWFDDF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL--------EQFTHEMEPFLRKQGMPVRLNKGVVELVS 160
DFAR G+ AT V LP GP+ E F H EP LRK G+ + +GV L +
Sbjct: 121 HPPDFARAGNLATRTVTLPAGPVLRVHSDPPEPFPHNEEPQLRKLGLGTVMKRGVPTLDA 180
Query: 161 DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREG 208
VC EGKPL+ E A++L+L+G +M F++ + RW AE E+ + G
Sbjct: 181 PHRVCAEGKPLTAEQAQLLKLIGERMVEFRVVMRARWEAESGEVTQVG 228
>gi|237831125|ref|XP_002364860.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|211962524|gb|EEA97719.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|221506977|gb|EEE32594.1| mRNA turnover protein 4 mrt4, putative [Toxoplasma gondii VEG]
Length = 228
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 122/216 (56%), Gaps = 19/216 (8%)
Query: 1 MPKSKRDRPVTLSKTKK-----KGKEHKEVIVNSIRNAVEN-YKSIYVFSFENMRNLKFK 54
MP SKR + V+L+K KK +G+E KE +++IR+ E + +Y+ F N RN K
Sbjct: 1 MPVSKRSKVVSLTKVKKQKCGGRGREVKEQWMDTIRSVCEEENQHVYLVEFVNQRNSLLK 60
Query: 55 EFREQIKPSRLLW-----VGRYPMRYSQA------YKVSKFLCGNTGLFLTNMPKEEVES 103
R+ IKP R+ + + R S + +K+SK L G+ L + E++++
Sbjct: 61 LVRDLIKPGRVFYGKNKVIQRALGTTSTSECLPNIHKLSKKLTGHRALLVCEHSSEKLQT 120
Query: 104 LFNKYEDYDFARTGSTATEKVELPEG--PLEQFTHEMEPFLRKQGMPVRLNKGVVELVSD 161
L +K + +FAR G ATE ++L EG L QF H +E R G+P L G + L+ D
Sbjct: 121 LLSKVQAKEFARAGFVATESIQLKEGFDALAQFPHSLEQRFRSLGLPTLLKDGKILLMGD 180
Query: 162 FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ VC +G+P++PE A++L+ LG+KMA F + L+ W
Sbjct: 181 YTVCTKGEPVTPEQAQVLKHLGVKMAEFHIKLLAEW 216
>gi|50557364|ref|XP_506090.1| mRNA turnover protein MRT4 [Yarrowia lipolytica CLIB122]
gi|49651960|emb|CAG78903.1| YALI0F31317p [Yarrowia lipolytica CLIB122]
Length = 233
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 119/228 (52%), Gaps = 25/228 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR++ + L+K +KK +E KEVIV+ I N ++ +K +VFS E MRN FK+ R
Sbjct: 1 MPKSKRNKVIALTKVEKKTREDKEVIVDEIHNYLDEHKYCFVFSVEGMRNTFFKDLRADW 60
Query: 61 KPSRLLWVGRYPMRYSQAYK------------VSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K SR+ + GR + K +S+++ G+ GL LT+ + V+ F +
Sbjct: 61 KGSRIFF-GRTKIMAKALGKSEEDEYKAGLGALSEYMSGDVGLLLTDEEPQVVKDYFESF 119
Query: 109 EDYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVV 156
D+AR G +T +P G P E H MEP LR GMP +L G V
Sbjct: 120 VREDYARAGQVSTVTFTIPAGVVHTTGGKIPAEDDVPVVHSMEPTLRSLGMPTQLKAGKV 179
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
EL + + VC+ G+ L R+L+ G+ + FK+H + + +E E+
Sbjct: 180 ELFAPYEVCKTGQTLDSRQTRLLKHFGVTSSFFKVHTVAYYDSEKEEV 227
>gi|221481027|gb|EEE19439.1| mRNA turnover protein 4 mrt4, putative [Toxoplasma gondii GT1]
Length = 228
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 122/216 (56%), Gaps = 19/216 (8%)
Query: 1 MPKSKRDRPVTLSKTKK-----KGKEHKEVIVNSIRNAVEN-YKSIYVFSFENMRNLKFK 54
MP SKR + V+L+K KK +G+E KE +++IR+ E + +Y+ F N RN K
Sbjct: 1 MPVSKRSKVVSLTKVKKQKCGGRGREVKEQWMDTIRSVCEEENQHVYLVEFVNQRNSLLK 60
Query: 55 EFREQIKPSRLLW-----VGRYPMRYSQA------YKVSKFLCGNTGLFLTNMPKEEVES 103
R+ IKP R+ + + R S + +K+SK L G+ L + +++++
Sbjct: 61 LVRDLIKPGRVFYGKNKVIQRALGTTSTSECLPNIHKLSKKLTGHRALLVCEHSSDKLQT 120
Query: 104 LFNKYEDYDFARTGSTATEKVELPEG--PLEQFTHEMEPFLRKQGMPVRLNKGVVELVSD 161
L +K + +FAR G ATE ++L EG L QF H +E R G+P L G + L+ D
Sbjct: 121 LLSKVQAKEFARAGFVATESIQLKEGFDALAQFPHSLEQRFRSLGLPTLLKDGKILLMGD 180
Query: 162 FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ VC +G+P++PE A++L+ LG+KMA F + L+ W
Sbjct: 181 YTVCTKGEPVTPEQAQVLKHLGVKMAEFHIKLLAEW 216
>gi|342885913|gb|EGU85865.1| hypothetical protein FOXB_03713 [Fusarium oxysporum Fo5176]
Length = 244
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 121/233 (51%), Gaps = 29/233 (12%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V L++ KK +E+K+ + +IR+ V Y++ +VFS +NMRN K+ R ++
Sbjct: 1 MPKSKRAKVVHLTQVSKKTRENKDKLFQNIRDTVPEYQNCFVFSVDNMRNNHLKDVRREL 60
Query: 61 KPSRLLW---------VGRYP--MRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
RL + +G+ P +S++L G GL LTN P EE+ S F
Sbjct: 61 SDCRLFFGKTKLMAKALGQTPEEAIAPGIEDLSRYLTGTVGLILTNRPVEEILSYFENLA 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G+ AT +P G P E H +EP LR+ G+P R+ KG V
Sbjct: 121 PVDFARAGAVATRDFSIPTGVVYATAGEVPAEHDVPLEHTIEPELRRLGVPTRMVKGRVV 180
Query: 158 LVS------DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
L ++VVC+EG L R+L+L + ++ FK+ ++ W+A E+
Sbjct: 181 LGDEAGQGEEYVVCKEGDVLDSRQTRLLKLFDVCLSEFKVKVLAYWNAASSEV 233
>gi|330918412|ref|XP_003298213.1| mRNA turnover protein MRT4 [Pyrenophora teres f. teres 0-1]
gi|311328725|gb|EFQ93690.1| hypothetical protein PTT_08845 [Pyrenophora teres f. teres 0-1]
Length = 235
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 114/221 (51%), Gaps = 23/221 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V L+KT KKGKE + +++ A +N++ ++VF+ ENMRN K+ R +
Sbjct: 1 MPKSKRAKVVHLTKTDKKGKELSLKLFANVQEAADNHEHVFVFAVENMRNSYLKDVRAEF 60
Query: 61 KPSRLLW---------VGRYPM--RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
SR + +G+ P + +++K + GN GL T+ E+ F+ Y
Sbjct: 61 SDSRFFFGKTKVMAKALGQTPAEEHLTNLSELTKHVNGNVGLLFTSRDPSEIIDYFSAYS 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQ------------FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G AT+ +P G + H ME +RK GMP RL +G +
Sbjct: 121 KTDFARAGVVATQTFTVPAGVVHSRGGEVPEDEDVPLPHSMETTIRKWGMPTRLQQGKIV 180
Query: 158 LVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
L + + + EEGK L+ +L++ G+ MA FK+ L ++
Sbjct: 181 LDAPYTIAEEGKALNSHQTALLKMFGVAMADFKIDLKAYYT 221
>gi|449284885|gb|EMC90752.1| mRNA turnover protein 4 like protein, partial [Columba livia]
Length = 131
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 87/126 (69%), Gaps = 2/126 (1%)
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
+VSK L G GL TN K+EV+ F+K+++ DFAR G+ AT V L GPLEQF H ME
Sbjct: 1 QVSKHLRGEVGLLFTNRTKDEVDEWFSKFKEVDFARAGNKATYTVSLDTGPLEQFPHSME 60
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
P LR+ G+P L KGVV L+SD+ VC+EG L+PE AR+L+L G +MA FK+ + W++
Sbjct: 61 PQLRQLGLPTALKKGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKFLWNS 120
Query: 200 E--DFE 203
E DF+
Sbjct: 121 ETGDFQ 126
>gi|397634608|gb|EJK71504.1| hypothetical protein THAOC_07047 [Thalassiosira oceanica]
Length = 240
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 120/234 (51%), Gaps = 33/234 (14%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR++ V L++T KK +EHK V ++R A++ IY+FS+ENMR+ FK+ R
Sbjct: 1 MPKSKREKRVALTQTAKKTREHKTNYVETVREAIDGNDRIYLFSYENMRSNHFKDVRLHF 60
Query: 61 K--------------------------PSRLLWV--GRYPM-RYSQA-YKVSKFLCGNTG 90
+ ++LL + GR P YS ++VSK L G+ G
Sbjct: 61 RGGNKNDDIMTDDGDGDSSGEGRIFLGKNKLLQIALGRTPEDEYSDNLHQVSKNLTGSVG 120
Query: 91 LFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVR 150
+ T ++VE F+ D+AR G + + V L + +E M RK G+PV
Sbjct: 121 ILCTTQSADDVEEYFSSLSVVDYARAGVLSPQTVRLTQKQVETHPVSMVELFRKLGLPVE 180
Query: 151 LNKGVVELVS---DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAED 201
+ G V + +F VC+EGK LS E +IL GIK++TFK+ L+ RW D
Sbjct: 181 VKNGRVSFIGERPEFEVCKEGKELSVEQCKILVHFGIKLSTFKISLVSRWEKSD 234
>gi|387219579|gb|AFJ69498.1| mrna turnover 4-like protein, partial [Nannochloropsis gaditana
CCMP526]
Length = 240
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 116/216 (53%), Gaps = 13/216 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+S+RD+ V+L+KT KGKE K + +R A++++ S+YVFSF++MR+ KFK+ R
Sbjct: 22 MPRSRRDQKVSLTKTTSKGKEQKAGTIAKVREALDSFTSLYVFSFQHMRSSKFKDVRIDW 81
Query: 61 KPSRLLWVGRYPMRYSQAYK-----------VSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
+ SR M+ + +SK L G GL TN +EEV + F ++
Sbjct: 82 RDSRFFMGKNKVMQKALGLLPEDEFRDNLRFLSKRLSGQVGLLATNRSREEVLTYFENFK 141
Query: 110 DYDFARTGSTATEKVEL--PEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEE 167
DFA+ G A V L + PL F M RK G+ + G + L+ F VC +
Sbjct: 142 VQDFAKPGVIADADVTLEPSKDPLHFFPTSMFQLFRKLGLNLETKNGKLVLLEAFPVCRK 201
Query: 168 GKPLSPESARILRLLGIKMATFKLHLICRWSAEDFE 203
GK ++PE A+++ L + + F++ L+C W +FE
Sbjct: 202 GKAITPEQAKLMTHLDLPLVDFRIRLVCCWRDGEFE 237
>gi|310789383|gb|EFQ24916.1| ribosomal protein L10 [Glomerella graminicola M1.001]
Length = 249
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 120/248 (48%), Gaps = 32/248 (12%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR+R V L++ KK +E K+ + +IR +V Y+ +VFS +NMRN KE R ++
Sbjct: 1 MPKSKRNRVVNLTQVNKKTREQKDKLFANIRESVPEYQHCFVFSVDNMRNNYLKEVRHEL 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
RL + +G+ P +++ FL G GL TN + S F
Sbjct: 61 NDCRLFFGKTKLMAKALGQDPSSAVADGIDRLTPFLAGTVGLLFTNRDPAAILSYFEGVS 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G+ AT +P G P E H +EP LR+ GMP R+ KG V
Sbjct: 121 PVDFARAGTVATRGFTVPAGVVYATGGEVPAEHDVPMEHSIEPELRRLGMPTRMVKGRVC 180
Query: 158 LVS------DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAED---FELYREG 208
L +VVC EG L R+L+L GI ++ FK+ ++ WSA E+
Sbjct: 181 LGDAEGGGEGYVVCREGDVLDSRQTRLLKLFGICLSEFKVQVLAYWSASSGKVTEVNPNA 240
Query: 209 LDESDVES 216
+D D ES
Sbjct: 241 MDGVDDES 248
>gi|452845860|gb|EME47793.1| hypothetical protein DOTSEDRAFT_123992 [Dothistroma septosporum
NZE10]
Length = 243
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 109/223 (48%), Gaps = 24/223 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKG-KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKR R V S +KK KE + +++ A + Y I+ FS ENMRN K+ R+
Sbjct: 1 MPKSKRARVVHTSVVQKKASKEKSATLFAAVQAAADEYAHIFTFSVENMRNNYLKDVRQH 60
Query: 60 IKPSRLLW---------VGRYPM--RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SRL + +G P +K+S L GN GL TN E+ F +
Sbjct: 61 FSDSRLFFGKTKVMAKALGTSPEDEHAPGLHKLSPHLKGNVGLLCTNRAPSEILEYFESF 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQ------------FTHEMEPFLRKQGMPVRLNKGVV 156
+ DFAR G+ A +P G + H E +RK GMP RL KG V
Sbjct: 121 VEVDFARAGTVADRTFTVPAGIVYSRAGEVSVEDDVPLPHPQEVTVRKWGMPTRLEKGKV 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
L ++VVCEEGK ++ +L+L G+ MA FK+ ++ WSA
Sbjct: 181 MLDQEYVVCEEGKEMNSHQTALLKLFGVAMAEFKVQMLAYWSA 223
>gi|449301834|gb|EMC97843.1| hypothetical protein BAUCODRAFT_31850 [Baudoinia compniacensis UAMH
10762]
Length = 246
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 114/224 (50%), Gaps = 25/224 (11%)
Query: 1 MPKSKRDRPVTLSKTKKK-GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKR R V S +KK KE + ++IR A +N+ I+VFS NMRN K+ R+
Sbjct: 1 MPKSKRARVVHTSVVQKKPSKEKSASLYSAIRAAADNFAHIFVFSVANMRNTYLKDVRQH 60
Query: 60 IKPSRLLWVGRYPMRY----SQA--------YKVSKFLCGNTGLFLTNMPKEEVESLFNK 107
L+ G+ + S A K+S +L G+ G+ TN +EV F
Sbjct: 61 FALDGRLFFGKTKVMAKALGSSAEDEHAPGLAKLSGYLKGSVGILCTNRAPKEVLEFFEG 120
Query: 108 YEDYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGV 155
Y + D+AR G TA+ +P G P+E H +E +RK GMP RL KG
Sbjct: 121 YVEVDYARAGVTASRTFTIPAGVVYSRGGELPVEDDVPLPHSLEVMVRKWGMPTRLEKGR 180
Query: 156 VELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
V L ++ V EEG+ L+ +L+L G+ MA FK+ ++ WSA
Sbjct: 181 VMLDQEYTVAEEGRELNSHQTALLKLFGVAMAEFKVQVLAYWSA 224
>gi|389744852|gb|EIM86034.1| hypothetical protein STEHIDRAFT_80204 [Stereum hirsutum FP-91666
SS1]
Length = 253
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 114/220 (51%), Gaps = 20/220 (9%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V+L+K KK KE K + +I+ +E +K ++F NMRN K R
Sbjct: 1 MPKSKRQKLVSLTKVAKKTKEQKGAQLTAIQENLEKWKYCWLFEVGNMRNAHLKTVRNLW 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K S ++ GR + +++ + G GLF T+ +EV F +
Sbjct: 61 KDSARMYFGRGALMAKALGTTPEDEHRPGISQLTPQIKGQVGLFFTDTEPDEVIEWFKDF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL--------EQFTHEMEPFLRKQGMPVRLNKGVVELVS 160
DFAR G+ A+ V LP GP+ E F H EP LRK G+ + KGV + +
Sbjct: 121 RQPDFARAGNRASRTVILPAGPVMQHHSDPPEPFPHNEEPQLRKLGLTTVMKKGVPTIDT 180
Query: 161 DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
+CE+GK L+PE A++L+L G KM F++ L RW+AE
Sbjct: 181 PHKLCEKGKVLTPEQAQLLKLTGEKMIEFRVGLKARWTAE 220
>gi|400597492|gb|EJP65225.1| ribosomal protein L10 [Beauveria bassiana ARSEF 2860]
Length = 244
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 117/233 (50%), Gaps = 29/233 (12%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR R L++ KKG+E K+ + +IR+AV Y+ +VFS +NMRN K R ++
Sbjct: 1 MPKSKRSRTFNLTQVNKKGREQKDKLFQNIRDAVPQYQHCFVFSVDNMRNSYLKNVRREM 60
Query: 61 KPSRLLW---------VGRYPMRYSQAY--KVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
SRL + +G+ P ++ L GN GL LT+ + V F+
Sbjct: 61 SDSRLFFGKTKLMAKALGQTPEEAVAPGIDACARLLAGNIGLLLTDRAPDTVLDYFDNLA 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G A +P G P E H +EP LR+ G+P R+ KG V
Sbjct: 121 LVDFARAGIVAPRAFSIPPGVVYATAGEVPAEHDVPLEHTLEPELRRLGVPTRMVKGRVV 180
Query: 158 LVSD------FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
L S+ +VVC+EG L R+L++ + ++ FK+ ++ WSAE E+
Sbjct: 181 LGSEDGEGEAYVVCKEGDVLDSRQTRLLKMFDVCLSEFKVKVLAYWSAESGEV 233
>gi|298714770|emb|CBJ25669.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 228
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 121/226 (53%), Gaps = 12/226 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+S+R++ V+L+KT KKG+E K+ IV+ +R V+ Y S+YVFSF N+R+ KE R
Sbjct: 1 MPRSQRNQKVSLTKTSKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRLDF 60
Query: 61 KPSRLLWVGRYPMRY------------SQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
+ ++G+ + +VSK L G GL T P EEV++ F
Sbjct: 61 REDSRFFMGKNKVMILALGKSEQDEYQDNLRQVSKRLKGQVGLLFTRRPAEEVKTYFKAL 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
D A G E + LP G L + M RK G+ V + +GV+ +C G
Sbjct: 121 AVADHAPPGFVHDETIPLPTGSLGDWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDV 214
+P+SPE A++L L K+ATF + L+CRWS +FE EG D++ V
Sbjct: 181 EPISPEGAKLLALYDKKIATFTMSLLCRWSEGEFEALAEGTDDAMV 226
>gi|367049670|ref|XP_003655214.1| mRNA turnover protein MRT4 [Thielavia terrestris NRRL 8126]
gi|347002478|gb|AEO68878.1| hypothetical protein THITE_2118650 [Thielavia terrestris NRRL 8126]
Length = 275
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 119/237 (50%), Gaps = 34/237 (14%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + L++ KK +E K+ + +IR + Y+ +VFS +NMRN K+ R+++
Sbjct: 1 MPKSKRAKVYHLTQVTKKTREQKDKLFANIRECIPKYQHCFVFSVDNMRNNYLKDVRQEL 60
Query: 61 KPSRLLW---------VGRYPMRYSQA---YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SRL + +G P SQA + ++++L G GL TN E V S F
Sbjct: 61 SDSRLFFGKTKLTARALGTTP-EESQADGLHALTRYLSGAVGLLFTNRAPEAVISYFGSL 119
Query: 109 EDYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVV 156
DFAR G+ AT V +P G P E H +EP LR+ GMP R+ +G V
Sbjct: 120 AHVDFARAGARATRTVTVPPGLVYSTGGEVPPEHDVPIAHTLEPELRRLGMPTRMVRGKV 179
Query: 157 ELVSD---------FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
L D + +C EG+ L R+L+L + M+ F++ L+ WSA E+
Sbjct: 180 CLGGDEKGEGMKEGYTICREGEVLDSRQTRLLKLFSVCMSEFRVSLLAYWSAASGEV 236
>gi|339265019|ref|XP_003366366.1| mRNA turnover protein 4-like protein [Trichinella spiralis]
gi|316962994|gb|EFV48858.1| mRNA turnover protein 4-like protein [Trichinella spiralis]
Length = 207
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 123/213 (57%), Gaps = 29/213 (13%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKRD+ V+L+ KKKG+E KE +V+ +R ++ YKSI VFS E+ R + + R
Sbjct: 1 MPRSKRDKEVSLTVVKKKGREGKEKLVDEVRRCIDAYKSILVFSVESFRTAQMNQVRHVF 60
Query: 61 KP-SRLLWV-------------GRYPMRYSQAYKVSKFLCGNTGLFLTNMPKEEVESL-- 104
K SR WV GR P S+ Y+ + LC + + L E V +
Sbjct: 61 KENSR--WVFFFGRNKVLAIALGRIP---SEEYREN--LCKLSSV-LVRTAVEIVHAFAA 112
Query: 105 -----FNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELV 159
K E +FAR+G+ ATE + +P GPLEQF +EP LRK G+PV L KGV+ +
Sbjct: 113 LLCRNLKKLEQPEFARSGNKATETITIPAGPLEQFQFTIEPLLRKLGLPVTLEKGVIIME 172
Query: 160 SDFVVCEEGKPLSPESARILRLLGIKMATFKLH 192
DFVVC++ L+PE A+IL L GIK+A FKL+
Sbjct: 173 KDFVVCKKDCVLTPEQAKILELFGIKLAKFKLN 205
>gi|452985818|gb|EME85574.1| hypothetical protein MYCFIDRAFT_41035 [Pseudocercospora fijiensis
CIRAD86]
Length = 239
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 110/224 (49%), Gaps = 25/224 (11%)
Query: 1 MPKSKRDRPVTLSKTKKK-GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKR + + S +KK KE +E + ++++A + Y I+VF NMRN K R++
Sbjct: 1 MPKSKRAKIIHTSNVQKKPSKEVREALYTAVQSACDTYAHIFVFDVSNMRNTYIKNVRQE 60
Query: 60 IKPSRLLWVGRYPMRYSQA------------YKVSKFLCGNTGLFLTNMPKEEVESLFNK 107
++ G+ + K++K+L GN GL TN EV
Sbjct: 61 FSSDGRIFYGKTKVMAKALGSGPEDECAPGLAKLAKYLQGNVGLLCTNRAPSEVLEYLEN 120
Query: 108 YEDYDFARTGSTATEKVELPEGPLEQ------------FTHEMEPFLRKQGMPVRLNKGV 155
Y + DFAR G A +P+G + H +E +RK GMP RL KG
Sbjct: 121 YVEVDFARAGVVANRGFVVPKGVVYSRGGEVAEEDDVALPHSLEVMVRKWGMPTRLEKGK 180
Query: 156 VELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
V L +FVVCEEG+ L+ +L+L G+ +A FK+H+ WSA
Sbjct: 181 VVLDQEFVVCEEGQELNSHQTALLKLFGVAIAEFKVHVKAYWSA 224
>gi|156040916|ref|XP_001587444.1| mRNA turnover protein MRT4 [Sclerotinia sclerotiorum 1980 UF-70]
gi|154695820|gb|EDN95558.1| hypothetical protein SS1G_11436 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 237
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 110/227 (48%), Gaps = 23/227 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR R V L+K KKGKE + ++R +++ Y+ +VFS ENMRN K+ R ++
Sbjct: 1 MPKSKRARVVHLTKVDKKGKELSLKLFANVRESLDTYQHCFVFSVENMRNTYLKDVRNEL 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK--VSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
RL + +G P Q +S L GN GL TN + + F +
Sbjct: 61 TDCRLFFGKTKVMSKALGSDPASEYQLNTSLLSPHLVGNVGLLFTNREPSSIITYFQELS 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQ------------FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G+ A+ +P G + H +EP LR+ +P L KG +
Sbjct: 121 KTDFARAGTEASRNFTIPAGIVYSMGGEIDAENDIPMAHSLEPELRRLNVPTTLTKGKIT 180
Query: 158 LVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
L + + VC EG L R+L+L G+ A F + L+ WSA + E+
Sbjct: 181 LENPYCVCNEGDVLDSRQTRLLKLFGVATAEFTVQLLAYWSAANQEV 227
>gi|403414834|emb|CCM01534.1| predicted protein [Fibroporia radiculosa]
Length = 257
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 126/235 (53%), Gaps = 20/235 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V+L+K +KK +EHK ++ ++ E ++ ++F NMRN K R+
Sbjct: 1 MPKSKRAKLVSLTKVEKKTREHKNALLKEVQENAEKWQYCWLFEVGNMRNAHLKTVRKLW 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K S ++ GR + S +K++K + G GLF T+ P EEV F +
Sbjct: 61 KDSARIFFGRGAVMAKALGTTPEEEHRSGLHKLAKQIKGQVGLFFTDSPPEEVIEWFADF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL--------EQFTHEMEPFLRKQGMPVRLNKGVVELVS 160
DFAR+G+ AT V LP GP+ E F H EP LRK G+ R+ +GV L +
Sbjct: 121 RQPDFARSGNKATRTVLLPAGPVMQQHSLPPEPFPHNEEPQLRKLGLRTRMERGVPTLDA 180
Query: 161 DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVE 215
VC +G+ L+ E A++L+L+G+K+ FK+ L RW A E+ + E VE
Sbjct: 181 PHTVCSKGRVLTAEQAQLLKLVGLKLVNFKVGLRARWEAASGEVVQVEGQEIGVE 235
>gi|154305181|ref|XP_001552993.1| mRNA turnover protein MRT4 [Botryotinia fuckeliana B05.10]
gi|347826794|emb|CCD42491.1| similar to mRNA turnover protein 4 homolog [Botryotinia fuckeliana]
Length = 237
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 110/227 (48%), Gaps = 23/227 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR R V L+K KKGKE + ++R ++++Y+ +VFS +NMRN K+ R ++
Sbjct: 1 MPKSKRARVVHLTKVDKKGKELSLKLFANVRESLDSYQHCFVFSVDNMRNTYLKDVRNEL 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK--VSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
RL + +G P Q +S L GN GL TN + + F
Sbjct: 61 SDCRLFFGKTKVMAKALGSDPSSEYQPNTSLLSPHLVGNVGLLFTNREPSSIITFFQDLS 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQ------------FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G+ A+ +P G + H +EP LR+ +P L KG +
Sbjct: 121 KTDFARAGTEASRNFTIPAGIVYSMGGEISAENDVPMAHSLEPELRRLNVPTTLTKGKIT 180
Query: 158 LVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
L + + VC EG L R+L+L G+ A F + L+ WSA + E+
Sbjct: 181 LENPYCVCNEGDVLDSRQTRLLKLFGVATADFSVQLLAYWSASNQEV 227
>gi|346971278|gb|EGY14730.1| mRNA turnover protein [Verticillium dahliae VdLs.17]
Length = 247
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 114/236 (48%), Gaps = 32/236 (13%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR+R + +++ KK +E K+ + +IR AV Y+ +VFS +NMRN K+ R ++
Sbjct: 1 MPKSKRNRLINMTQVSKKTREDKDKLFANIREAVPQYQHCFVFSVDNMRNNHLKDVRHEL 60
Query: 61 KPSRL-----------LWVGRYPMRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
RL L R +++ L G GL LTN + + F
Sbjct: 61 SDCRLFFGKTKLMSKALGQTRETALLDGTDRLTPHLSGTVGLLLTNRDPSAITAYFEGLS 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G+TA + +P+G P E H +EP LR+ GMP R+ +G +
Sbjct: 121 PVDFARAGTTAPREFAIPQGVLFATGGEVPREHDVPMEHSIEPELRRLGMPTRMVRGRIV 180
Query: 158 L---------VSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
L +VVC+EG L R+L+L GI M+ F + LI WSA E+
Sbjct: 181 LGEEEPAEDAAPGYVVCKEGDVLDSRQTRLLKLFGICMSEFHVELIAYWSAATGEV 236
>gi|226469970|emb|CAX70266.1| mRNA turnover protein 4 homolog [Schistosoma japonicum]
Length = 266
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 112/212 (52%), Gaps = 12/212 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP S+RD+ V L+K +K + K+ + +R ++ YK +YV + N R K E R+ +
Sbjct: 1 MPTSRRDKKVELTKVQKHAPKKKQHVAK-VRQYLDEYKRVYVVTLHNPRTQKVSEIRKNM 59
Query: 61 KPSRLLW------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
+LL+ V + +Y+ + K+L G L T E+ + +
Sbjct: 60 PDIKLLFGINKVTVLALGKTHKDSYRPKLHHLCKYLKGQCALLFTKSSPSELREQLDAFR 119
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
++ R G+ A + V + GPL +F H MEP LR+ GMPV+L +GVV L D++VC
Sbjct: 120 SAEYCRPGAPAEQTVRIASGPLPKFPHTMEPVLRQLGMPVKLVRGVVHLERDYLVCNSED 179
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAED 201
LSPE RIL+L I+M+ F++ L+ W+ D
Sbjct: 180 VLSPEQCRILKLFQIEMSEFRVGLLAVWTDGD 211
>gi|398406853|ref|XP_003854892.1| hypothetical protein MYCGRDRAFT_99074 [Zymoseptoria tritici IPO323]
gi|339474776|gb|EGP89868.1| hypothetical protein MYCGRDRAFT_99074 [Zymoseptoria tritici IPO323]
Length = 241
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 111/223 (49%), Gaps = 24/223 (10%)
Query: 1 MPKSKRDRPVTLSKTKKK-GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKR R V S +KK KE + ++++A ++Y I+VF ENMRN K+ R+Q
Sbjct: 1 MPKSKRSRVVHTSVVQKKPSKEKALALFEAVQHAADSYAHIFVFDVENMRNTYLKDVRQQ 60
Query: 60 IKPSRLLWVGRYPMRYSQA-----------YKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SR+ + M + +K++++L G+ GL TN EV F Y
Sbjct: 61 FSDSRIFFGKTKVMAKALGQTRETEHAPGLWKLNQYLKGSVGLLCTNRAPAEVLQYFEGY 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQ------------FTHEMEPFLRKQGMPVRLNKGVV 156
+ DFAR G+ A+ +P G + H +E +RK GMP RL KG V
Sbjct: 121 VEVDFARAGTEASRTFTIPAGVVYSRGGEEAIEDDVALPHSLEVTVRKWGMPTRLEKGKV 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
L + VC+EGK L+ +L+L G+ A FK+ + WSA
Sbjct: 181 MLDQEHTVCQEGKELNSHQTALLKLFGVATAEFKVEVQAYWSA 223
>gi|226488957|emb|CAX74828.1| mRNA turnover protein 4 homolog [Schistosoma japonicum]
Length = 266
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 112/212 (52%), Gaps = 12/212 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP S+RD+ V L+K +K + K+ + +R ++ YK +YV + N R K E R+ +
Sbjct: 1 MPTSRRDKKVELTKVQKHAPKKKQHVAK-VRQYLDEYKRVYVVTLHNPRTQKVSEIRKNM 59
Query: 61 KPSRLLW------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
+LL+ V + +Y+ + K+L G L T E+ + +
Sbjct: 60 PDIKLLFGINKVTVLALGKTHKDSYRPKLHHLCKYLKGQCALLFTKSSPSELREQLDAFR 119
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
++ R G+ A + V + GPL +F H MEP LR+ GMPV+L +GVV L D++VC
Sbjct: 120 SAEYCRPGAPAEQTVRIASGPLPKFPHTMEPVLRQLGMPVKLVRGVVHLERDYLVCNSED 179
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAED 201
LSPE RIL+L I+M+ F++ L+ W+ D
Sbjct: 180 VLSPEQCRILKLFQIEMSEFRVGLLAVWTDGD 211
>gi|134081799|emb|CAK42055.1| unnamed protein product [Aspergillus niger]
Length = 234
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 116/232 (50%), Gaps = 17/232 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKG-KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP+SKR R V SKT KK KE + +IR +E Y ++VF +NMRN K+ R +
Sbjct: 1 MPRSKRARVVHESKTTKKSHKEQTRRLYANIRECIEKYDHLFVFGVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLW---------VGRYPMRYS--QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SRL + +G P + +K++ +L G GL T+ + V F +
Sbjct: 61 FADSRLFFGKTKVMAVALGHNPENEAAPNLHKLNPYLTGAVGLLFTSRDPQSVTDYFESF 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVEL-----VSDFV 163
DFAR+G+ +T +P G E +H +EP LRK G+P RL KG V L F
Sbjct: 121 RPLDFARSGTVSTRAFSIPNGQDEPLSHTIEPELRKLGVPTRLVKGKVMLELTEGQEGFP 180
Query: 164 VCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVE 215
VC EG+ L +L++ G+ MA F + L W+ E E+ DE+ +E
Sbjct: 181 VCREGEVLDSRQTTLLKMFGVVMAEFHVALKAHWTRESGEVEILEKDEAGME 232
>gi|46124655|ref|XP_386881.1| hypothetical protein FG06705.1 [Gibberella zeae PH-1]
gi|408398953|gb|EKJ78078.1| hypothetical protein FPSE_01539 [Fusarium pseudograminearum CS3096]
Length = 244
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 124/244 (50%), Gaps = 32/244 (13%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKS+R + V L++ KK +E+K+ + +IR+ V Y++ +VFS +NMRN K+ R ++
Sbjct: 1 MPKSRRAKVVHLTQVDKKTRENKDKLFQNIRDTVPEYQNCFVFSVDNMRNNHLKDVRREL 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
R+ + +G+ P +SK+ G GL LTN P EE+ + F
Sbjct: 61 SDCRVFFGKTKLMAKALGQTPEEAIAPGIEHLSKYFTGTVGLILTNRPAEEILTYFENLA 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G+ AT +P G P E H +EP LR+ G+P R+ KG V
Sbjct: 121 PVDFARAGAVATRDFSIPTGVVYATAGEVPAEHDVPLAHTIEPELRRLGVPTRMVKGRVV 180
Query: 158 LVS------DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA---EDFELYREG 208
L ++ VC+EG L R+L+L + M+ FK+ ++ W+A E E+
Sbjct: 181 LGDESGQGEEYTVCKEGDVLDSRQTRLLKLFDMCMSEFKVKVLAYWNAGSSEVTEVNTNA 240
Query: 209 LDES 212
+DE+
Sbjct: 241 MDEN 244
>gi|322702159|gb|EFY93907.1| 60S acidic ribosomal protein P0, putative [Metarhizium acridum CQMa
102]
Length = 247
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 127/250 (50%), Gaps = 41/250 (16%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + L++ KK +E K+ + +IR+AV Y+ +VFS +NMRN K R ++
Sbjct: 1 MPKSKRAKVFHLTQVTKKTREQKDKLFQNIRDAVPEYQHCFVFSVDNMRNSYLKNVRHEL 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
SRL + +G+ P S+A ++++L G GL LTN P E + F+
Sbjct: 61 NDSRLFFGKTKLMAKALGQSP---SEAIAPGIEDLTQYLSGTVGLLLTNRPVESILEYFD 117
Query: 107 KYEDYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKG 154
+ DFAR G T+ +P G P+E H +EP LR +P R+ KG
Sbjct: 118 NFAPVDFARAGVTSPRDFTIPAGVVYATAGEVPVEHDVPLEHTIEPELRMLNVPTRMVKG 177
Query: 155 VVELVSD------FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYR-- 206
V L + +VVC+EG L R+L+L G+ ++ FK+ ++ WS+ E+
Sbjct: 178 RVVLGDESGQGEGYVVCKEGDVLDSRQTRLLKLFGVCISEFKVKILAYWSSASGEVTEVD 237
Query: 207 ----EGLDES 212
EG+DE+
Sbjct: 238 PSAMEGVDEN 247
>gi|281208480|gb|EFA82656.1| ribosomal protein L10 family protein [Polysphondylium pallidum
PN500]
Length = 232
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 123/229 (53%), Gaps = 22/229 (9%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
M +SKR + V+L+K K + K +++++R VE Y IY+ SF+N+RN K+ R
Sbjct: 1 MVQSKRSKAVSLTKVTKNPNQKKSKLISTVRECVEEYSDIYLISFDNVRNNHLKQARADW 60
Query: 61 KPSRLLW---------VGRYPMRYSQA--YKVSKFL--CGNTGLFLTNMPKEEVESLFNK 107
SR L+ +GR + K+S+ L G LF TN PK+ V S
Sbjct: 61 SNSRFLFGKKKVLSIGLGRADSDEQKPGLSKLSQNLQSSGECCLFFTNDPKDTVLS---- 116
Query: 108 YEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEE 167
+ DFAR G E + L +GP++ TH EP+LR+ GMP L GV+ L D+ +CE+
Sbjct: 117 --EVDFARAGFEPEETITLKQGPID-MTHTQEPYLRRLGMPTSLKNGVIILERDYDLCEK 173
Query: 168 GKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVES 216
G L+P+ AR+L+L K++ FK L+ W +D E Y +DV+S
Sbjct: 174 GTVLTPDQARLLQLFDHKISEFKFILLGYW--KDAEYYALQEPSADVKS 220
>gi|399217154|emb|CCF73841.1| unnamed protein product [Babesia microti strain RI]
Length = 219
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 117/220 (53%), Gaps = 20/220 (9%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKS-IYVFSFENMRNLKFKEFREQ 59
MP SKR+R V SK KK GK K V+++SIRN+++N +YV N RN K KE R
Sbjct: 1 MPLSKRNRIVATSKVKKDGKNRKRVLIDSIRNSIQNEDVYVYVLELSNQRNAKLKELRGI 60
Query: 60 IKPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
+ P R+ + M+ + +K+S+ + G L +T KEE + K
Sbjct: 61 LFPGRIFYGKNKVMQIALGNSPETEICENIHKLSQMITGERALLIT---KEEPNMICKKL 117
Query: 109 EDY---DFARTGSTATEKVELPEG--PLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFV 163
+ +FA+TG + + L E PL+ F MEP R+ G+P RLN G +EL+ +
Sbjct: 118 ASFKPMEFAKTGFVSNTTITLKEDDKPLKDFPGSMEPQFRQLGLPTRLNMGKIELMGEAN 177
Query: 164 VCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFE 203
VC EG+PLS A +L+LLG K+ F++ + ++ F+
Sbjct: 178 VCNEGEPLSSNQANLLKLLGHKLVEFRIAALAFYNDGTFK 217
>gi|290994995|ref|XP_002680117.1| 60S acidic ribosomal protein [Naegleria gruberi]
gi|284093736|gb|EFC47373.1| 60S acidic ribosomal protein [Naegleria gruberi]
Length = 237
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 111/216 (51%), Gaps = 12/216 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKG-KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPK+KRD+ +TL+KTKK+ KE K +V IRNA+E + +IY+ N R KE R
Sbjct: 1 MPKAKRDKLITLTKTKKRSTKEQKNKLVEEIRNAIEEFNNIYILDLSNCRTNHVKEIRRD 60
Query: 60 IKPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
S+ MR + + SKFL LF+T+ PK EV F +
Sbjct: 61 FNESKFFMTKNKVMRVALGTSPENEVENDLHNASKFLTATRALFITDRPKAEVAKYFANF 120
Query: 109 EDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
+ D+A+ G AT+ + L GP++ +E L G+P+ + V+ ++ F +C G
Sbjct: 121 KRSDYAKVGFVATKTITLEAGPVDWMPFSLEERLLNLGLPIEVKNKVINILRPFNLCTFG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
+P++ + A++L+ G ++ F ++C + + +L
Sbjct: 181 EPITAQQAKLLKHFGHELTEFNASIVCHYDKKTHKL 216
>gi|296422012|ref|XP_002840557.1| mRNA turnover protein MRT4 [Tuber melanosporum Mel28]
gi|295636775|emb|CAZ84748.1| unnamed protein product [Tuber melanosporum]
Length = 236
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 120/235 (51%), Gaps = 24/235 (10%)
Query: 1 MPKSKRDRPVTLSKTKKK-GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP+SKR + V+L+KT K+ G+E+ E + IR +++ ++ ++VFS +NMRN KE R
Sbjct: 1 MPRSKRSKVVSLTKTDKRPGRENNERLYGKIRESIDEHQIVFVFSVDNMRNTHLKEVRTD 60
Query: 60 IKPSRLLWVGRYPM------RYSQAYKV-----SKFLCGNTGLFLTNMPKEEVESLFNKY 108
SR+ + M S Y++ SK L GN GL +T+ P EEV + F +
Sbjct: 61 FSDSRIFFGKTKVMAKALGTSASDEYRLNLSSLSKHLTGNVGLLITSRPAEEVLTYFESF 120
Query: 109 EDYDFARTGSTATEKVELPEG-------PLEQ-----FTHEMEPFLRKQGMPVRLNKGVV 156
D+AR + + +P G L+Q H +E +R GMP RL G V
Sbjct: 121 SKQDYARMNAVSPITFIVPAGVVYSSGGSLQQEEDVPMAHSLETTVRGLGMPTRLVNGKV 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDE 211
L +FVVC+EGK L + A +L++ GI A F + W++ ++ G E
Sbjct: 181 HLDQEFVVCKEGKKLDSKQATLLKIFGIPTAEFVIRPSAYWTSATMQVTAVGAME 235
>gi|226488959|emb|CAX74829.1| mRNA turnover protein 4 homolog [Schistosoma japonicum]
Length = 266
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 112/212 (52%), Gaps = 12/212 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP S+RD+ V L++ +K + K+ + +R ++ YK +YV + N R K E R+ +
Sbjct: 1 MPTSRRDKKVELTEVQKHAPKKKQHVAK-VRQYLDEYKRVYVVTLHNPRTQKVSEIRKNM 59
Query: 61 KPSRLLW------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
+LL+ V + +Y+ + K+L G L T E+ + +
Sbjct: 60 PDIKLLFGINKVTVLALGKTHKDSYRPKLHHLCKYLKGQCALLFTKSSPSELREQLDAFR 119
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
++ R G+ A + V + GPL +F H MEP LR+ GMPV+L +GVV L D++VC
Sbjct: 120 SAEYCRPGAPAEQTVRIASGPLPKFPHTMEPVLRQLGMPVKLVRGVVHLERDYLVCNSED 179
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAED 201
LSPE RIL+L I+M+ F++ L+ W+ D
Sbjct: 180 VLSPEQCRILKLFQIEMSEFRVGLLAVWTDGD 211
>gi|226488955|emb|CAX74827.1| mRNA turnover protein 4 homolog [Schistosoma japonicum]
Length = 266
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 112/212 (52%), Gaps = 12/212 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP S+RD+ V L+K +K + K+ + +R ++ YK +YV + N R K E R+ +
Sbjct: 1 MPTSRRDKKVELTKVQKHAPKKKQHVAK-VRQYLDEYKRVYVVTLHNPRTQKVSEIRKNM 59
Query: 61 KPSRLLW------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
+LL+ V + +Y+ + K+L G L T ++ + +
Sbjct: 60 PDIKLLFGINKVTVLALGKTHKDSYRPKLHHLCKYLKGQCALLFTKSSPSKLREQLDAFR 119
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
++ R G+ A + V + GPL +F H MEP LR+ GMPV+L +GVV L D++VC
Sbjct: 120 SAEYCRPGAPAEQTVRIASGPLPKFPHTMEPVLRQLGMPVKLVRGVVHLERDYLVCNSED 179
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAED 201
LSPE RIL+L I+M+ F++ L+ W+ D
Sbjct: 180 VLSPEQCRILKLFQIEMSEFRVGLLAVWTDGD 211
>gi|238594987|ref|XP_002393638.1| hypothetical protein MPER_06598 [Moniliophthora perniciosa FA553]
gi|215461421|gb|EEB94568.1| hypothetical protein MPER_06598 [Moniliophthora perniciosa FA553]
Length = 243
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 112/216 (51%), Gaps = 24/216 (11%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V+L+K +KK + HKE + I + +K ++F RN + R+
Sbjct: 1 MPKSKRSKLVSLTKVEKKDRSHKEAQIKLIPENADQWKYCWLFEVAAYRNGHLQTVRK-- 58
Query: 61 KPSRLLWVGRY--PMRYSQA-------YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDY 111
LW G Y +R + +K+++ + G GL T+ EV F +
Sbjct: 59 -----LWKGTYGKSIRDNTGGRHRMGIHKLAQQIEGQVGLLFTDTEPREVIDWFTDFHPP 113
Query: 112 DFARTGSTATEKVELPEGPL--------EQFTHEMEPFLRKQGMPVRLNKGVVELVSDFV 163
DFAR G+ A V LP GP+ E F H EP LRK G+ ++N+GV L
Sbjct: 114 DFARAGNVAPRTVILPAGPVMQHHSDPPEPFPHNEEPQLRKLGLSTKMNRGVPTLEVPHK 173
Query: 164 VCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
+CE+GK L+ E A++L+L+G KM TFK+ L+ RW A
Sbjct: 174 LCEKGKTLTAEQAQLLKLIGEKMVTFKVGLLARWEA 209
>gi|430811871|emb|CCJ30665.1| unnamed protein product [Pneumocystis jirovecii]
Length = 253
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 126/244 (51%), Gaps = 41/244 (16%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSK+ + ++L++T KKG+EHK+ + IRN ++ Y+ I+VFS ENM+N+ FKE R +
Sbjct: 1 MPKSKKSKIISLTRTDKKGQEHKKKLFEDIRNCIDKYEYIWVFSVENMKNVHFKEVRREW 60
Query: 61 KPSRLL--------------WVGRYPMRYSQAYKVSK--------------FLCGNTGLF 92
K SRL+ +VGR + +++ ++K L GN G+
Sbjct: 61 KCSRLVKKNLNKWNQHSIRFFVGRLRV-IAKSLGITKDEEYRENLNELAKQLLHGNVGVL 119
Query: 93 LTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG---------PLEQFT---HEMEP 140
T+ V F+K+ DFAR+G + +P G P E T H +EP
Sbjct: 120 FTSESVPTVVDFFSKFSRMDFARSGFISPLTFIVPSGTVYSRGGQIPEESDTPLPHTLEP 179
Query: 141 FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
LR GMP L G + L +++ +C++G L ++L++ GI + FK+ L WS+
Sbjct: 180 ILRNLGMPTLLKNGQITLFNEYTICKKGDVLDNRQTKLLKIFGIITSEFKIRLKGYWSSF 239
Query: 201 DFEL 204
+ E+
Sbjct: 240 NNEV 243
>gi|119478258|ref|XP_001259340.1| mRNA turnover protein MRT4 [Neosartorya fischeri NRRL 181]
gi|119407494|gb|EAW17443.1| 60S acidic ribosomal protein P0, putative [Neosartorya fischeri
NRRL 181]
Length = 247
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 117/227 (51%), Gaps = 29/227 (12%)
Query: 1 MPKSKRDRPVTLSK-TKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP+SKR R V SK TKK KE + +IR VENY ++VFS +NMRN K+ R +
Sbjct: 1 MPRSKRARIVHESKVTKKSHKEQTRRLYANIRECVENYDHLFVFSVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLW---------VGRYPMRYS--QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SRL + +G P + +K+S +L G GL T+ E V S F+ +
Sbjct: 61 FADSRLFFGKTKVMAVALGHNPETEAAPNLHKLSPYLTGAVGLLFTSRDAESVLSYFDAF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNKGVV 156
DFAR G+ +T +P G + E +H +EP LRK G+P RL KG V
Sbjct: 121 RPLDFARAGTVSTRSFSIPNGLVYSRGGEIPASEDEPVSHTIEPELRKLGVPTRLVKGKV 180
Query: 157 EL-VSD----FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
L ++D + VC+EG+ L +L++ G+ A FK+ L +W+
Sbjct: 181 MLELTDGQEGYPVCKEGEVLDSRQTTLLKMFGVATAEFKVDLKAQWT 227
>gi|367027922|ref|XP_003663245.1| hypothetical protein MYCTH_2304925 [Myceliophthora thermophila ATCC
42464]
gi|347010514|gb|AEO58000.1| hypothetical protein MYCTH_2304925 [Myceliophthora thermophila ATCC
42464]
Length = 278
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 115/232 (49%), Gaps = 34/232 (14%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR R L++ KK +E K+ + +SIR + Y+ + FS +NMRN KE R ++
Sbjct: 1 MPKSKRARVYHLTQVSKKTREQKDKLFSSIRECIPQYQHCFAFSVDNMRNNYLKEVRHEL 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYKV---SKFLCGNTGLFLTNMPKEEVESLFNKY 108
R+ + +G P +QA + ++ L G GL TN EE+ S F+
Sbjct: 61 SDCRMFFGKTKLTARALGTTP-EDAQADGIDGLARHLTGAVGLLFTNRDPEEIISYFDSL 119
Query: 109 EDYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVV 156
DFAR G+ A V +P G P E H +EP LR+ GMP R+ KG V
Sbjct: 120 SHVDFARAGTVAPRTVTVPPGVVYSTGGEVPPENDVPIAHTLEPELRRLGMPTRMVKGKV 179
Query: 157 ELVSD---------FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
L +D + +C+EG L R+L+L I ++ F++ L+ WSA
Sbjct: 180 CLGADESGEGRVGGYTICKEGDVLDSRQTRLLKLFSICLSEFRVALLAYWSA 231
>gi|389632569|ref|XP_003713937.1| mRNA turnover protein 4 [Magnaporthe oryzae 70-15]
gi|291195842|gb|ADD84637.1| unknown [Magnaporthe oryzae]
gi|351646270|gb|EHA54130.1| mRNA turnover protein 4 [Magnaporthe oryzae 70-15]
gi|440473214|gb|ELQ42029.1| mRNA turnover protein 4 [Magnaporthe oryzae Y34]
gi|440480245|gb|ELQ60920.1| mRNA turnover protein 4 [Magnaporthe oryzae P131]
Length = 251
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 118/251 (47%), Gaps = 38/251 (15%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V ++ KK +E KE++ +IR V Y+ ++VFS +NMRN K+ R ++
Sbjct: 1 MPKSKRAKVVHMTNVAKKTREQKELLFTNIRECVPQYQHLFVFSVDNMRNNNLKDVRREL 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
++ G+ + + +K++ L G GL TN P E+ S +
Sbjct: 61 SGDSRMFFGKTKLMARALGQTAEDEQAEGLHKLTSHLAGTVGLIFTNRPASELLSYLDSI 120
Query: 109 EDYDFARTGSTATEKVELPEG---------PLE---QFTHEMEPFLRKQGMPVRLNKGVV 156
DFAR G+ A +P G P E H +EP LRK G+P RL KG V
Sbjct: 121 TSVDFARAGAVAPRDFSIPPGVVYSTGGEVPQEYDVPLAHSIEPELRKLGVPTRLIKGRV 180
Query: 157 EL-------VSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYR--- 206
L + + VC EG L R+L+L + + FK+ ++ WSA E+
Sbjct: 181 VLGGENGEGSTGYDVCREGDVLDSRQTRLLKLFSVCFSEFKIQVLAYWSAATGEVTEVNP 240
Query: 207 ----EGLDESD 213
+ +D+SD
Sbjct: 241 GSAGDAIDDSD 251
>gi|344240735|gb|EGV96838.1| mRNA turnover protein 4-like [Cricetulus griseus]
Length = 206
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 111/219 (50%), Gaps = 43/219 (19%)
Query: 10 VTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLW-- 67
V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R K SR+ +
Sbjct: 1 VSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWKHSRMFFGK 60
Query: 68 -------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFAR 115
+GR P S YK VSK L G GL TN KEEV F KY + DFAR
Sbjct: 61 NKVMMVALGRSP---SDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYTEMDFAR 117
Query: 116 TGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPES 175
G+ AT V L GPL+QF H EP LR+ G+P+ L K EGK
Sbjct: 118 AGNKATLTVSLNPGPLKQFLHSTEPQLRRLGLPIALKK-------------EGK------ 158
Query: 176 ARILRLLGIKMATFKLHLICRWSAED--FELYREGLDES 212
L G +MA FK+ + W A+ F+ + L ES
Sbjct: 159 -----LFGYEMAEFKVTIKYMWDAQSGRFQQMDDDLPES 192
>gi|402078982|gb|EJT74247.1| mRNA turnover protein 4 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 251
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 114/234 (48%), Gaps = 30/234 (12%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V L+ KK +E KE + +IR V Y+ +VFS +NMRN + K+ R +
Sbjct: 1 MPKSKRSKVVHLTSVTKKTREQKEQLFGNIRQCVPEYQHCFVFSVDNMRNNQLKDLRRDM 60
Query: 61 KPSRLLW---------VGRYP--MRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
SR+ + +G+ P + + +++ L G GL TN +V S
Sbjct: 61 ADSRMFFGKTKLMARALGQTPEDEQADGIHGLARHLTGTVGLIFTNRDPSDVLSTLQSVS 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G+ A +P G P E H +EP LRK G+P RL KG V
Sbjct: 121 AIDFARAGAVAPRGFRVPPGVVYSTGGEVPAEDDVPMAHSIEPELRKLGVPTRLVKGKVV 180
Query: 158 LVSD-------FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
L ++ +VVC EG L R+L+L + ++ F++ ++ WSA E+
Sbjct: 181 LGAEDGSGSEGYVVCREGDVLDGRQTRLLKLFSVCLSEFRVRVLAYWSAASSEV 234
>gi|121714028|ref|XP_001274625.1| mRNA turnover protein MRT4 [Aspergillus clavatus NRRL 1]
gi|119402778|gb|EAW13199.1| 60S acidic ribosomal protein P0, putative [Aspergillus clavatus
NRRL 1]
Length = 248
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 122/244 (50%), Gaps = 29/244 (11%)
Query: 1 MPKSKRDRPVTLSK-TKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP+SKR R V SK TKK KE + +IR VENY ++VFS +NMRN K+ R +
Sbjct: 1 MPRSKRARIVHESKVTKKSHKEQTRRLYANIRECVENYDHLFVFSVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLW---------VGRYPMRYS--QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SR+ + +G+ P + YK++ +L G GL T+ E V S F+ +
Sbjct: 61 FADSRVFFGKTKVMSVALGQNPENEAAPNLYKLTPYLTGAVGLLFTSRDPESVLSYFDAF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNKGVV 156
DFAR+G+ +T +P G + E +H +EP LRK G+P RL KG V
Sbjct: 121 RPLDFARSGTVSTRSFSIPNGQVYSRAGEIPASEDEPLSHTIEPDLRKLGVPTRLVKGKV 180
Query: 157 EL-----VSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDE 211
L + VC+EG+ L +L++ G+ A F + + +W+ E+ D+
Sbjct: 181 MLELTEGQESYPVCKEGEILDSRQTTLLKMFGVASAEFHVDVKAQWTRSTGEVKILETDQ 240
Query: 212 SDVE 215
S +E
Sbjct: 241 SGME 244
>gi|380489303|emb|CCF36799.1| mRNA turnover protein 4 [Colletotrichum higginsianum]
Length = 224
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 110/223 (49%), Gaps = 29/223 (13%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR+R V L++ KK +E K+ + +IR +V Y+ +VF NMRN KE R ++
Sbjct: 1 MPKSKRNRVVNLTQVNKKTREQKDKLFANIRESVPEYQHCFVFGVNNMRNNYLKEVRHEL 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
RL + +G+ P +++ FL G GL TN + S F+
Sbjct: 61 NDCRLFFGKTKLMAKALGQDPSSAVADGIDRLTPFLAGTVGLLFTNRDPAAILSYFDGVS 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G+ AT +P G P E H +EP LR+ GMP R+ KG V
Sbjct: 121 PVDFARAGTVATRGFSIPSGVVYAPGGEVPAEHDVPLEHSIEPELRRLGMPTRMIKGRVC 180
Query: 158 L------VSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
L D+VVC EG L R+L+L GI ++ FK+ ++
Sbjct: 181 LGDAEGGGDDYVVCREGDVLDSRQTRLLKLFGICLSEFKVKVL 223
>gi|253747524|gb|EET02162.1| Acidic ribosomal protein P0 [Giardia intestinalis ATCC 50581]
Length = 241
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 121/220 (55%), Gaps = 16/220 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + V L+K +KK +E K+ I+ IR A + Y ++YV NM + +++ R +
Sbjct: 1 MPRSKRSKTVVLTKVEKKTREAKQEIIKQIREAFDIYDTVYVIDSHNMNSSSWQQLRTAM 60
Query: 61 KPSRLLWVGRYP-MRY-----------SQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K +++G+ MRY S+ +++ + L G TGL T+ P+E+V S
Sbjct: 61 KDYARIFMGKNQLMRYALGKTEEESYRSKTWQLGRLLKGMTGLLFTSAPEEKVRSALASA 120
Query: 109 EDYDFARTGSTATEKVELPEGPL--EQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
AR G AT+ + +P+GPL ++++ +EP LRK G+P L V+ ++ D V+C+
Sbjct: 121 ARPCLARGGDVATKTIVIPQGPLDRDKYSFALEPELRKLGLPTSLQNTVIHVLCDHVLCK 180
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRW--SAEDFEL 204
EG L+ AR+L+ L ++ + + W + ED ++
Sbjct: 181 EGDILTSAQARLLKHLDHVLSESSVTIRGVWHKATEDLDV 220
>gi|295670645|ref|XP_002795870.1| mRNA turnover protein MRT4 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284955|gb|EEH40521.1| mRNA turnover protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 243
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 113/228 (49%), Gaps = 27/228 (11%)
Query: 1 MPKSKRDRPVTLSKTKKKG-KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP SKR R V SKT KK KE + +I+ AV Y I++FS +NMRN KE R +
Sbjct: 1 MPISKRARLVHESKTAKKSHKEQTRRLFANIQTAVTQYDHIFLFSVDNMRNTYLKEVRTE 60
Query: 60 IKPSRLLW---------VGRYPMRYS--QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SRL + +G P +++ FL GN GL T+ + V FN +
Sbjct: 61 FADSRLFFGKTKVMAVALGNTPETACAPNLNQLTPFLTGNVGLLFTSRSPQSVLHFFNSF 120
Query: 109 EDYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVV 156
DFAR G+ T +P G P +Q +H +EP LRK G+P RL KG V
Sbjct: 121 HPTDFARAGTVTTRSFTIPSGIVYSQGGEVPADQDQPISHTIEPMLRKLGIPTRLVKGKV 180
Query: 157 ELVSD---FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAED 201
L + + VC+ G+ L +L++ G+ +A F++ + +W+ ED
Sbjct: 181 VLEVEGEGYQVCKAGETLDSRQTTLLKIFGVAVAEFRVEMKAQWNRED 228
>gi|354489599|ref|XP_003506949.1| PREDICTED: mRNA turnover protein 4 homolog [Cricetulus griseus]
Length = 150
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 89/142 (62%), Gaps = 4/142 (2%)
Query: 79 YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEM 138
++VSK L G GL TN KEEV F KY + DFAR G+ AT V L GPL+QF H
Sbjct: 6 FQVSKKLRGEVGLLFTNRTKEEVNEWFTKYTEMDFARAGNKATLTVSLNPGPLKQFLHST 65
Query: 139 EPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
EP LR+ G+P+ L KGVV L+SD+ VC+EG L+PE AR+L L G +MA FK+ + W
Sbjct: 66 EPQLRRLGLPIALKKGVVTLLSDYEVCKEGDVLTPEQARVL-LFGYEMAEFKVTIKYMWD 124
Query: 199 AED--FELYREGLDES-DVESA 217
A+ F+ + L ES VE A
Sbjct: 125 AQSGRFQQMDDDLPESCSVEGA 146
>gi|354489405|ref|XP_003506853.1| PREDICTED: mRNA turnover protein 4 homolog [Cricetulus griseus]
Length = 159
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Query: 85 LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRK 144
+ GL TN KEEV F KY + DFA G+ AT V L G LEQF H MEP LR+
Sbjct: 16 IASEVGLLFTNHTKEEVNEWFTKYTERDFASAGNKATLTVSLDPGLLEQFPHSMEPQLRQ 75
Query: 145 QGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAED--F 202
QG+P+ L KGVV L+SD+ VC+EG L+PE AR+L+L G +MA FK+ + W A+ F
Sbjct: 76 QGLPIALKKGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDAKSGRF 135
Query: 203 ELYREGLDESDVES 216
+ L ES ES
Sbjct: 136 QKMDNDLPESTAES 149
>gi|159111538|ref|XP_001706000.1| Acidic ribosomal protein P0 [Giardia lamblia ATCC 50803]
gi|157434092|gb|EDO78326.1| Acidic ribosomal protein P0 [Giardia lamblia ATCC 50803]
Length = 251
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 110/194 (56%), Gaps = 14/194 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + V L+K +KK +E K+ I+ IR A + Y ++YV NM + +++ R +
Sbjct: 11 MPRSKRSKTVVLAKVEKKTREAKQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRTSM 70
Query: 61 KPSRLLWVGRYP-MRY-----------SQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K +++G+ MRY ++ +++ + L G TGL T+ P+E+V S
Sbjct: 71 KGYARIFMGKNQLMRYALGKTEEESYRTKTWQLGRLLKGMTGLLFTSAPEEKVRSALASV 130
Query: 109 EDYDFARTGSTATEKVELPEGPL--EQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
AR G AT+ + +P+GPL ++++ +EP LRK G+P L V+ ++ D V+C+
Sbjct: 131 ARPCLARGGDVATKTIVIPQGPLDRDKYSFALEPELRKLGLPTSLQNTVIHVLCDHVLCK 190
Query: 167 EGKPLSPESARILR 180
EG L+ AR+L+
Sbjct: 191 EGDVLTSAQARLLK 204
>gi|212529896|ref|XP_002145105.1| mRNA turnover protein MRT4 [Talaromyces marneffei ATCC 18224]
gi|210074503|gb|EEA28590.1| 60S acidic ribosomal protein P0, putative [Talaromyces marneffei
ATCC 18224]
Length = 246
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 118/233 (50%), Gaps = 29/233 (12%)
Query: 1 MPKSKRDRPVTLSKTKKKG-KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP SKR R V SKT KK KE + +IR VE Y ++VFS +NMRN K+ R +
Sbjct: 1 MPVSKRARLVHESKTSKKNHKEQTRRLFANIRECVEQYDHLFVFSVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLW---------VGRYP-MRYSQAY-KVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
RL + +G P ++Q K+++FL G GL T+ EEV + +
Sbjct: 61 FSDGRLFFGKTKVMAVALGNTPETAFAQNLEKLNRFLTGAVGLLFTSRSPEEVITYLESF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNKG-- 154
DFAR G+ AT +P G + + +H +EP LRK G+P RL KG
Sbjct: 121 RPSDFARAGNVATRSFTIPNGVVYSRAGEIPTSEDDPISHTIEPALRKLGVPTRLIKGQV 180
Query: 155 VVELVS---DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
V+EL+ +VVC+EG+ L +L++ G+ + FK+ + +W E E+
Sbjct: 181 VLELLDGEKGYVVCKEGETLDSRQTTLLKMFGVATSEFKIDIKAQWDRETGEV 233
>gi|70997105|ref|XP_753307.1| 60S acidic ribosomal protein P0 [Aspergillus fumigatus Af293]
gi|66850943|gb|EAL91269.1| 60S acidic ribosomal protein P0, putative [Aspergillus fumigatus
Af293]
gi|159126967|gb|EDP52083.1| 60S acidic ribosomal protein P0, putative [Aspergillus fumigatus
A1163]
Length = 247
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 122/243 (50%), Gaps = 33/243 (13%)
Query: 1 MPKSKRDRPVTLSK-TKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP+SKR R V SK TKK KE + +IR VE Y ++VFS +NMRN K+ R +
Sbjct: 1 MPRSKRARIVHESKVTKKSHKEQTRRLYANIRECVEKYDHLFVFSVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLW---------VGRYPMRYS--QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SRL + +G P + +K+S +L G GL T+ E V S F+ +
Sbjct: 61 FADSRLFFGKTKVMAVALGHNPENEAAPNLHKLSPYLTGAVGLLFTSRDPESVLSYFDAF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNKGVV 156
DFAR G+ +T +P G + E +H +EP LRK G+P RL KG V
Sbjct: 121 RPLDFARAGTVSTRSFSIPNGLVYSRGGEIPASEDEPVSHTIEPELRKLGVPTRLVKGKV 180
Query: 157 EL-VSD----FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL----YRE 207
L ++D + VC+EG+ L +L++ G+ A FK+ L +W+ E+ E
Sbjct: 181 MLELTDGQEGYPVCKEGEVLDSRQTTLLKMFGVATAEFKVDLKAQWTRSTGEVKILEKDE 240
Query: 208 GLD 210
G+D
Sbjct: 241 GMD 243
>gi|353244068|emb|CCA75525.1| related to protein involved in RNA turnover [Piriformospora indica
DSM 11827]
Length = 258
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 114/229 (49%), Gaps = 29/229 (12%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V+L+KT+KKG+ KE +V I+ ++ ++ +++F +MRN K+ R
Sbjct: 1 MPKSKRAKVVSLTKTEKKGRAKKEALVQEIQENLDKWRYLWLFEVGHMRNAHLKDIRADW 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K + ++ GR + K+S L G GLF T+ E F+
Sbjct: 61 KETGRMFFGRVSVMALALGTSPEREHMPGLSKLSNHLKGQVGLFFTSWDVSETLDYFHSI 120
Query: 109 EDYDFARTGSTATEKVELPEG-PLEQ----------------FTHEMEPFLRKQGMPVRL 151
+FAR G AT+ +P G PL F MEP LRK G+ RL
Sbjct: 121 RRPEFARAGCVATQTFIIPSGGPLSPILSQEDKAAGIERSTPFPSAMEPQLRKLGLSTRL 180
Query: 152 NKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
KG + + ++ VC+ G L+ E A+IL+L+G+KM+ F++ L W E
Sbjct: 181 EKGSIMMAAEQTVCKAGDKLTSEQAQILKLMGVKMSVFRVGLRWLWDKE 229
>gi|225677480|gb|EEH15764.1| mRNA turnover protein [Paracoccidioides brasiliensis Pb03]
gi|226295398|gb|EEH50818.1| mRNA turnover protein [Paracoccidioides brasiliensis Pb18]
Length = 243
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 113/228 (49%), Gaps = 27/228 (11%)
Query: 1 MPKSKRDRPVTLSKTKKKG-KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP SKR R V SKT KK KE + +I+ AV Y I++FS +NMRN K+ R +
Sbjct: 1 MPISKRARLVHESKTAKKSHKEQTRRLFANIQTAVTQYDHIFLFSVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLW---------VGRYPMRYS--QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SRL + +G P +++ FL GN GL T+ + V FN +
Sbjct: 61 FADSRLFFGKTKVMAVALGNTPETACAPNLNQLTPFLTGNVGLLFTSRSPQSVLQYFNSF 120
Query: 109 EDYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVV 156
DFAR G+ T +P G P +Q +H +EP LRK GMP RL KG V
Sbjct: 121 HPTDFARAGTVTTRSFTIPSGIVYSQGGEVPADQDQPISHTIEPMLRKLGMPTRLVKGKV 180
Query: 157 ELVSD---FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAED 201
L + + VC+ G+ L +L++ G+ +A F++ + +W+ +D
Sbjct: 181 VLEVEGEGYQVCKAGETLDSRQTTLLKMFGVAVAEFRVEMKAQWNRKD 228
>gi|358374137|dbj|GAA90731.1| 60S acidic ribosomal protein P0 [Aspergillus kawachii IFO 4308]
Length = 246
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 118/244 (48%), Gaps = 29/244 (11%)
Query: 1 MPKSKRDRPVTLSKT-KKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP+SKR R V SKT KK KE + +IR +E Y ++VF +NMRN K+ R +
Sbjct: 1 MPRSKRARVVHESKTVKKSHKEQTRRLYANIRECIEKYDHLFVFGVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLW---------VGRYPMRYS--QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SRL + +G P + +K+S +L G GL T+ + V F+ +
Sbjct: 61 FADSRLFFGKTKVMAVALGHNPENEAAPNLHKLSPYLTGAVGLLFTSRDPQSVTDYFDNF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNKGVV 156
DFAR+G+ +T +P G + E +H +EP LRK G+P RL KG V
Sbjct: 121 RPLDFARSGTVSTRAFSIPNGQVYSRAGEIPASEDEPLSHTIEPELRKLGVPTRLVKGKV 180
Query: 157 EL-----VSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDE 211
L F +C EG+ L +L++ G+ MA F + L W+ E E+ DE
Sbjct: 181 MLELTEGQEGFPICREGEVLDSRQTTLLKMFGVVMAEFHVALKAHWTRESGEVEILEKDE 240
Query: 212 SDVE 215
+ +E
Sbjct: 241 AGME 244
>gi|429857181|gb|ELA32060.1| 60s acidic ribosomal protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 247
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 113/234 (48%), Gaps = 30/234 (12%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR+R V L++ KK +E K+ + +IR V Y+ +VF+ +NMRN K+ R ++
Sbjct: 1 MPKSKRNRIVNLTQVSKKTREQKDKLFANIRETVPEYQHCFVFAVDNMRNNYLKQVRHEL 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
RL + +G+ P +++ FL G GL TN + V F
Sbjct: 61 TDCRLFFGKTKLMAKALGQDPSSAVADGIDRLTPFLSGTVGLLFTNRDPKAVLEYFKGVS 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G+ AT +P G P E H +EP LR+ GMP R+ KG V
Sbjct: 121 PVDFARAGTVATRDFVIPPGVVYATGGEVPAEHDVPMEHSIEPELRRLGMPTRMIKGRVC 180
Query: 158 LVS-------DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
L + VC+EG L R+L+L I ++ FK+ ++ WSA E+
Sbjct: 181 LGDADGSSGEGYTVCKEGDTLDSRQTRLLKLFSICLSEFKVQVMAYWSAASGEV 234
>gi|428673284|gb|EKX74197.1| 60S ribosomal protein L10e, putative [Babesia equi]
Length = 228
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 111/227 (48%), Gaps = 22/227 (9%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKS---------IYVFSFENMRNL 51
M SKR + V L+ KK K K +V SIRN + + IY+ S N RN
Sbjct: 1 MAVSKRKKVVNLTSCKKDAKTRKNNLVESIRNTINKFSEAKESEAGAYIYLLSLSNQRNS 60
Query: 52 KFKEFREQIKPSRL---------LWVGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEE 100
K R + P RL L +G P Y +K++K + G L +T+ +
Sbjct: 61 PLKNLRAILLPGRLFYGKNKVMQLALGTKPENELYDGVHKIAKDIVGEVALLVTSDHPDL 120
Query: 101 VESLFNKYEDYDFARTGSTATEKVELPEG--PLEQFTHEMEPFLRKQGMPVRLNKGVVEL 158
V N Y+ DFA++G+ ATE + L EG EQ ME R G+P L G + L
Sbjct: 121 VAEKVNSYKVRDFAKSGNIATETIVLKEGGSDFEQVPGNMEAQFRNLGLPTSLKMGKIVL 180
Query: 159 VSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELY 205
+ D+V+ EEGKPL+P A +L+LLGI+ A F + S +++++
Sbjct: 181 MGDYVLSEEGKPLTPNQAHVLKLLGIRTAVFSAKVHSCLSDGEYKVF 227
>gi|76156443|gb|AAX27652.2| SJCHGC01801 protein [Schistosoma japonicum]
Length = 236
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 12/207 (5%)
Query: 6 RDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRL 65
RD+ V L+K +K + K+ V +R ++ YK +YV + N R K E R+ + +L
Sbjct: 1 RDKKVELTKVQKHAPKKKQ-DVAKVRQYLDEYKRVYVVTLHNPRTQKVSEIRKNMPDIKL 59
Query: 66 LW------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFA 114
L+ V + +Y+ + K+L G L T E+ + + ++
Sbjct: 60 LFGINKVTVWALGKTHKDSYRPKLHHLCKYLKGQCALLFTKSSPSELREQLDAFRSAEYC 119
Query: 115 RTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPE 174
R G+ A + V + GPL +F H MEP LR+ GMPV+L +GVV L D++VC LSPE
Sbjct: 120 RPGAPAEQTVRIASGPLPKFPHTMEPVLRQLGMPVKLVRGVVHLERDYLVCNSEDVLSPE 179
Query: 175 SARILRLLGIKMATFKLHLICRWSAED 201
RIL+L I+M+ F++ L+ W+ D
Sbjct: 180 QCRILKLFQIEMSEFRVGLLAVWTDGD 206
>gi|322707330|gb|EFY98909.1| 60S acidic ribosomal protein P0, putative [Metarhizium anisopliae
ARSEF 23]
Length = 273
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 116/227 (51%), Gaps = 35/227 (15%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + L++ KK +E K+ + +IR+AV Y+ +VFS +NMRN K R ++
Sbjct: 1 MPKSKRAKVFHLTQVTKKTREQKDKLFQNIRDAVPEYQHCFVFSVDNMRNSYLKNVRHEL 60
Query: 61 KPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFN 106
SRL + +G+ P S+A ++++L G GL LTN P E + FN
Sbjct: 61 NDSRLFFGKTKLMAKALGQSP---SEAVAPGIEDLTQYLSGTVGLLLTNRPAESILEYFN 117
Query: 107 KYEDYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKG 154
+ DFAR G + +P G P+E H +EP LRK +P R+ KG
Sbjct: 118 NFAPVDFARAGVASPRDFTIPAGVVYATAGEVPVEHDVPLEHTIEPELRKLNVPTRMVKG 177
Query: 155 VVELVSD------FVVCEEGKPLSPESARILRLLGIKMATFKLHLIC 195
V L + +VVC+EG L R+L+L G+ ++ FK+ ++
Sbjct: 178 RVVLGDESGQGEGYVVCKEGDVLDSRQTRLLKLFGVCVSEFKVKILA 224
>gi|308158269|gb|EFO61034.1| Acidic ribosomal protein P0 [Giardia lamblia P15]
Length = 241
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 110/194 (56%), Gaps = 14/194 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + V L+K +KK +E K+ I+ IR A + Y ++YV NM + +++ R +
Sbjct: 1 MPRSKRSKTVVLAKVEKKTREAKQEIIKQIREAFDKYDTVYVIDSHNMNSSSWQQLRMIM 60
Query: 61 KPSRLLWVGRYP-MRY-----------SQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K +++G+ MRY ++ +++ + L G TGL T+ P+E+V S
Sbjct: 61 KEYARIFMGKNQLMRYALGKTEEESYRTKTWQLGRLLKGMTGLLFTSAPEEKVRSALASV 120
Query: 109 EDYDFARTGSTATEKVELPEGPL--EQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
AR G AT+ + +P+GPL ++++ +EP LRK G+P L V+ ++ D V+C+
Sbjct: 121 ARPCLARGGDVATKTIVIPQGPLDRDKYSFALEPELRKLGLPTSLQNTVIHVLCDHVLCK 180
Query: 167 EGKPLSPESARILR 180
EG L+ AR+L+
Sbjct: 181 EGDILTSAQARLLK 194
>gi|291221114|ref|XP_002730570.1| PREDICTED: mRNA turnover 4 homolog [Saccoglossus kowalevskii]
Length = 177
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 76/122 (62%)
Query: 79 YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEM 138
+++SK L GN G+ TN K+E F Y D R+G+ A V L EGPLEQF H M
Sbjct: 18 HRLSKRLAGNVGILFTNKTKDETIKWFEGYSFADHPRSGNKAAYTVTLDEGPLEQFPHSM 77
Query: 139 EPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
EP LR+ G+P L KG+V L+S+ VC+ G L+PE ARIL+LL KM+ F + L C WS
Sbjct: 78 EPHLRQLGLPTTLKKGIVTLLSEHTVCKAGHNLTPEQARILKLLDHKMSKFSIKLECMWS 137
Query: 199 AE 200
+
Sbjct: 138 ND 139
>gi|317034762|ref|XP_001401117.2| mRNA turnover protein MRT4 [Aspergillus niger CBS 513.88]
gi|350639552|gb|EHA27906.1| hypothetical protein ASPNIDRAFT_53863 [Aspergillus niger ATCC 1015]
Length = 246
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 117/244 (47%), Gaps = 29/244 (11%)
Query: 1 MPKSKRDRPVTLSKTKKKG-KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP+SKR R V SKT KK KE + +IR +E Y ++VF +NMRN K+ R +
Sbjct: 1 MPRSKRARVVHESKTTKKSHKEQTRRLYANIRECIEKYDHLFVFGVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLW---------VGRYPMRYS--QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SRL + +G P + +K++ +L G GL T+ + V F +
Sbjct: 61 FADSRLFFGKTKVMAVALGHNPENEAAPNLHKLNPYLTGAVGLLFTSRDPQSVTDYFESF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNKGVV 156
DFAR+G+ +T +P G + E +H +EP LRK G+P RL KG V
Sbjct: 121 RPLDFARSGTVSTRAFSIPNGQVYSRAGEIPVSEDEPLSHTIEPELRKLGVPTRLVKGKV 180
Query: 157 EL-----VSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDE 211
L F VC EG+ L +L++ G+ MA F + L W+ E E+ DE
Sbjct: 181 MLELTEGQEGFPVCREGEVLDSRQTTLLKMFGVVMAEFHVALKAHWTRESGEVEILEKDE 240
Query: 212 SDVE 215
+ +E
Sbjct: 241 AGME 244
>gi|378726744|gb|EHY53203.1| 50S ribosomal protein L10 [Exophiala dermatitidis NIH/UT8656]
Length = 248
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 125/249 (50%), Gaps = 34/249 (13%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP SKR+R + SKT+K KE + +++ A E Y I+VF +NMRN K+ R++
Sbjct: 1 MPPSKRNRVIPTSKTRKNRKELVRRLAANVQEAAEKYSYIWVFDVQNMRNNFIKQVRKEF 60
Query: 61 KPSRL-------LWVGRYPMRYSQAY----KVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
SR+ L VG ++ + + G GL T+ +EVE F +
Sbjct: 61 DDSRIMMGKTKVLMVGLGQTEETECVPGVSALGPHVKGEVGLLFTDREPKEVEEYFEDFL 120
Query: 110 DYDFARTGSTATEKVELPEGPL-----------EQFTHEMEPFLRKQGMPVRLNKG--VV 156
DFAR+GS AT +V +P GP+ + ++EP LRK G+P RL KG V+
Sbjct: 121 AEDFARSGSVATREVRIPPGPIHTQYGVPGGEDDPLPIQIEPTLRKLGIPTRLQKGTIVL 180
Query: 157 ELVSD--------FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREG 208
E +D +VVC EG L IL++LG+KM+ FK+ L + ++ + G
Sbjct: 181 EEPADGSMVEEEGYVVCREGDTLDSRQTSILKILGVKMSEFKIELKAVFDKKEATVREVG 240
Query: 209 LDESDVESA 217
E DV++A
Sbjct: 241 --EMDVDAA 247
>gi|444719210|gb|ELW60008.1| mRNA turnover protein 4 like protein [Tupaia chinensis]
Length = 274
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 97/198 (48%), Gaps = 27/198 (13%)
Query: 2 PKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIK 61
KSK D+ ++L+KT KKG K+ + +R V+ K +++ S NMRN K K+ R K
Sbjct: 104 SKSKHDKKISLTKTAKKGLGLKQNLTEELRKCVDTSKYLFLVSMVNMRNGKLKDIRNTWK 163
Query: 62 PSRLLWVGRYPMRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTAT 121
S++ + KEEV F +Y + F G+ A
Sbjct: 164 HSQMF---------------------------SGKNKEEVNEWFTEYTEMAFTHAGNKAA 196
Query: 122 EKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRL 181
L GPLEQ H ME LR+ +P L GVV L+SD+ VC EG L+ E AR+L+L
Sbjct: 197 FTASLGSGPLEQLPHSMELQLRQLSLPTALKSGVVTLLSDYEVCREGDVLTLEQARVLKL 256
Query: 182 LGIKMATFKLHLICRWSA 199
G +MA FK+ + W A
Sbjct: 257 FGYEMAEFKVTMKYMWDA 274
>gi|346327422|gb|EGX97018.1| 60S acidic ribosomal protein P0 [Cordyceps militaris CM01]
Length = 248
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 111/230 (48%), Gaps = 29/230 (12%)
Query: 4 SKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPS 63
SKR + L++ KKG+E K+ + +IR+AV Y+ VF +NMRN K R ++ S
Sbjct: 6 SKRSKTFNLTQVNKKGREQKDKLFQNIRDAVPEYQHCVVFCIDNMRNTYLKNVRRELSDS 65
Query: 64 RLLW---------VGRYP--MRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYD 112
RL + +G+ P +++ L GN GL TN V + F+ D
Sbjct: 66 RLFFGKTKLMAKALGQTPEEAVAPGIQAIARILAGNVGLVFTNRDPAAVLAYFDGLALVD 125
Query: 113 FARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVVELVS 160
FAR G AT +P G P E H +EP LR+ G+P R+ KG V L
Sbjct: 126 FARAGVVATRTFSIPTGVVHATAGEVPAEHDVPLEHTLEPELRRLGVPTRMVKGRVVLGD 185
Query: 161 D------FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
+ +VVC+EG L R+L++ + ++ FK+ ++ WSA E+
Sbjct: 186 EDGEGEAYVVCKEGDVLDSRQTRLLKMFDVCLSEFKVKVLAYWSAATGEV 235
>gi|358391968|gb|EHK41372.1| hypothetical protein TRIATDRAFT_127105 [Trichoderma atroviride IMI
206040]
Length = 248
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 113/233 (48%), Gaps = 29/233 (12%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + V L++ KK +E K+ + +IR+ V Y+ VF+ +NMRN KE R ++
Sbjct: 1 MPKSKRAKVVHLTQVSKKTREQKDQLFQNIRDQVPEYQHCIVFNVDNMRNNYLKEVRREL 60
Query: 61 KPSRLLW---------VGRYP--MRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
SRL + +G+ P ++ + G GL LTN P +V N
Sbjct: 61 NDSRLFFGKTKLMAKALGQTPEEAILPGIEGLAPHIAGTVGLLLTNRPVNDVLDYLNGIV 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G TA+ +P G P E H +EP LR+ G+P R+ KG V
Sbjct: 121 SVDFARAGVTASRSFIIPPGVVYATGGEVPKENDIPLGHTIEPELRRLGIPTRMVKGKVV 180
Query: 158 L------VSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
L + VC+EG L R+L+L + ++ FK+ ++ WSA E+
Sbjct: 181 LGEENGEGEGYTVCKEGDVLDSRQTRLLKLFDVCLSEFKIKVLAYWSAATSEV 233
>gi|449015466|dbj|BAM78868.1| 60S acidic ribosomal protein PO [Cyanidioschyzon merolae strain
10D]
Length = 235
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 121/224 (54%), Gaps = 24/224 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVE-NYKSIYVFSFENMRNLKFKEFREQ 59
MP+SKR R + L T K ++ K ++ +R+ + + IYVF + ++RN KEFRE+
Sbjct: 1 MPRSKRARRLALHGTTTKTRQEKAKMIELVRSFLPPKHTKIYVFEYGDIRNQSLKEFREE 60
Query: 60 IK------------PSRLLWV--GRYP--MRYSQAYKVSKFLCGNTGLFLTNMPKEEVES 103
+K +R+L V GR P + +++ + L G GL + P V+
Sbjct: 61 VKRLPEGGGRLFLGSNRVLQVALGRSPEEALAPELHQLGEKLRGKRGLLFCSAPHVLVQE 120
Query: 104 LFNKYEDYDFARTGSTATEKVELPEG-PLEQFTHEMEPFLRKQGMPVRLNKG--VVELVS 160
LF +E ++AR G+ A E V L G PLE P LR+ G+P+ L G +++++
Sbjct: 121 LFANFERREYARAGTIAPEDVRLAVGEPLEDLPASSGPKLRELGLPISLRGGRLFLDVIA 180
Query: 161 D----FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
F++C +G+ LS E +LR+LGI++AT +LHL RW AE
Sbjct: 181 GPDKHFLICSKGEILSAEQCVLLRMLGIRLATARLHLRYRWDAE 224
>gi|50294758|ref|XP_449790.1| mRNA turnover protein MRT4 [Candida glabrata CBS 138]
gi|51316210|sp|Q6FJ04.1|MRT4_CANGA RecName: Full=mRNA turnover protein 4 homolog
gi|49529104|emb|CAG62768.1| unnamed protein product [Candida glabrata]
Length = 239
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 118/224 (52%), Gaps = 24/224 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKG+E+KE I + +R A++ YK ++V +++R +E RE
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDTYKYVFVLQLDDVRTPVLQEIREAW 60
Query: 61 KPSRLLWVGRYPMRYS------QAY-----KVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+LL R + + Q Y K++K+ G GL TN + V+ F Y
Sbjct: 61 VGSKLLMGKRKVLEKALGTTREQEYKENLSKLTKYCSGVIGLLFTNETLDTVKEYFEAYS 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLR-KQGMPVRLNKGVV 156
D++R S A E+PEG P+E+ H +EP LR K MP ++ G +
Sbjct: 121 RLDYSRPNSRAPITFEVPEGIVYSRGGQIPIEEDVPMAHSLEPTLRNKYEMPTKIKAGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
L + ++VC+EG+ L A IL+ G+ +A FK+ + + E
Sbjct: 181 TLEAPYLVCKEGQKLDVRQALILKQFGVALAQFKVIISAYYDNE 224
>gi|242761912|ref|XP_002340273.1| mRNA turnover protein MRT4 [Talaromyces stipitatus ATCC 10500]
gi|218723469|gb|EED22886.1| 60S acidic ribosomal protein P0, putative [Talaromyces stipitatus
ATCC 10500]
Length = 246
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 112/226 (49%), Gaps = 29/226 (12%)
Query: 1 MPKSKRDRPVTLSKTKKKG-KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP SKR R V SKT KK KE + +IR VE Y ++VFS +NMRN K+ R +
Sbjct: 1 MPVSKRARIVHESKTSKKNHKEQTRRLFANIRECVEQYDHLFVFSVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLW---------VGRYP-MRYSQAY-KVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
RL + +G P ++Q K++ FL G GL T+ E+V + +
Sbjct: 61 FSDGRLFFGKTKVMAVALGNTPETAFAQNLEKLTPFLTGAVGLLFTSRSPEDVITYLESF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNKG-- 154
DFAR G+ +T +P G + + +H +EP LRK G+P RL KG
Sbjct: 121 HPSDFARAGTVSTRSFTIPNGVVYSRAGEIPTSEDDPISHTIEPALRKLGVPTRLVKGQV 180
Query: 155 VVELVS---DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
V+EL+ + VC EG+ L +L++ G+ + F++ L +W
Sbjct: 181 VLELLDGEKGYAVCREGETLDSRQTTLLKMFGVATSEFRIDLKAQW 226
>gi|320586805|gb|EFW99468.1| 60S acidic ribosomal protein [Grosmannia clavigera kw1407]
Length = 279
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 119/246 (48%), Gaps = 44/246 (17%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR++ + L++ KK +EHK+ + +SIR+AV Y+ +V ENMRN E R+++
Sbjct: 1 MPKSKREKLLHLTQVAKKTREHKDRLFSSIRDAVPEYEHCFVVHVENMRNQHLHELRQEL 60
Query: 61 KPSRLLWVGRYPMRYSQAYKVS--------------KFLCGNTGLFLTNMPKEEVESLFN 106
SR L++G+ + ++A S +++ G GL LT+ ++V + +
Sbjct: 61 SDSR-LFLGKTKL-MARALGTSPGEALLPGIDRLAERYMHGTVGLLLTSRRPDDVRAYLD 118
Query: 107 KYEDYDFARTGSTATEKVELPEGPLEQ------------FTHEMEPFLRKQGMPVRLNKG 154
DFAR G+ AT V +P G L +EP LR+ G+P + G
Sbjct: 119 AISPVDFARAGTVATRDVIIPHGQLYSTGGLVPAADDVPIATALEPELRRLGVPTSIKAG 178
Query: 155 VVEL----------------VSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
V L V + +C G+ L +R+LRL GI ++ F++ + WS
Sbjct: 179 KVVLEAPDNADTDTDSETAAVGGYPICRAGQVLDSRQSRLLRLFGICLSEFRVGALAYWS 238
Query: 199 AEDFEL 204
A E+
Sbjct: 239 AASGEV 244
>gi|115399500|ref|XP_001215339.1| mRNA turnover protein MRT4 [Aspergillus terreus NIH2624]
gi|114192222|gb|EAU33922.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 249
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 112/229 (48%), Gaps = 31/229 (13%)
Query: 1 MPKSKRDRPVTLSKTKKKG-KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP+SKR R V SKT KK KE + +IR VE Y+ ++VF +NMRN K+ R +
Sbjct: 1 MPRSKRARVVHESKTAKKSHKEQTRRLYANIRECVEKYEHLFVFGVDNMRNTYLKDVRTE 60
Query: 60 IKPSR-----------LLWVGRYPMRYS--QAYKVSKFLCGNTGLFLTNMPKEEVESLFN 106
SR + +G P + +K+S L G GL T+ E V S F+
Sbjct: 61 FADSRGRLFFGKTKVMAVALGHNPESEAAPNLHKLSPLLSGAVGLLFTSRDPESVLSYFD 120
Query: 107 KYEDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNKG 154
+ DFAR G+ +T +P G + E +H +EP LRK G+P RL KG
Sbjct: 121 TFRPLDFARAGTVSTRSFTIPNGLVYSRAGEIPTADDEPISHTIEPELRKLGVPTRLVKG 180
Query: 155 --VVELVSD---FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
++EL D + VC EG+ L +L++ G+ A F++ L W+
Sbjct: 181 KVMLELTDDQEGYPVCREGEVLDSRQTTLLKMFGVASAEFRVDLKAYWT 229
>gi|410074335|ref|XP_003954750.1| hypothetical protein KAFR_0A01770 [Kazachstania africana CBS 2517]
gi|372461332|emb|CCF55615.1| hypothetical protein KAFR_0A01770 [Kazachstania africana CBS 2517]
Length = 236
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 24/228 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKG+E+KE I + IR A++ Y+ +++ +++R +E R
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEIREALDTYRYVWILHLDDVRTPVLQEIRTAW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ + ++ + +K+SKF G TGL TN E V+ F Y
Sbjct: 61 TGSKLIMGKQKVLQKAIGDNVTNEYKDNLHKLSKFFTGVTGLLFTNEDVETVKDYFRAYS 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQ-GMPVRLNKGVV 156
D++R S A +P G P+E+ H +EP R + +P + KG +
Sbjct: 121 RSDYSRPNSIAPLTFVIPSGIVYSRGGQIPIEEDIPMVHSLEPTFRNKFNIPTTIKKGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
+ S + VCEEGK L A IL+ GI + FK+ + + E E+
Sbjct: 181 TIDSPYTVCEEGKKLDVRQALILKQFGIAASEFKVKISAFYDTESAEV 228
>gi|425767064|gb|EKV05647.1| 60S acidic ribosomal protein P0, putative [Penicillium digitatum
Pd1]
gi|425780250|gb|EKV18265.1| 60S acidic ribosomal protein P0, putative [Penicillium digitatum
PHI26]
Length = 246
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 108/227 (47%), Gaps = 29/227 (12%)
Query: 1 MPKSKRDRPVTLSKTKKKG-KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP+SKR R V SKT KK KE + +IR +E Y ++VF+ +NMRN K+ R +
Sbjct: 1 MPRSKRARVVHESKTTKKDHKEQTRRLFANIRECIEEYDHLFVFAVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SR+ + M + K++ FL G GL T+ E V F +
Sbjct: 61 FGDSRVFFGKTKVMGKALGTDVESEAAPNVRKLTPFLAGAVGLLFTSRTPESVIEYFENF 120
Query: 109 EDYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVV 156
DFAR G+ AT +P G P EQ +H +EP LRK G+P RL KG V
Sbjct: 121 RPQDFARAGTEATRSFTIPNGLVTARGGEIPAEQDEPVSHTIEPALRKLGVPTRLVKGKV 180
Query: 157 EL-----VSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
L + VC+EG+ L +L++ GI + FK+ L W+
Sbjct: 181 MLELTEGQEGYPVCKEGETLDSRQTTLLKMFGITSSEFKVDLKAYWT 227
>gi|401407314|ref|XP_003883106.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325117522|emb|CBZ53074.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 186
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 106/205 (51%), Gaps = 40/205 (19%)
Query: 1 MPKSKRDRPVTLSKTKK-----KGKEHKEVIVNSIRNAVEN-YKSIYVFSFENMRNLKFK 54
MP SKR++ V+L+K KK +G+E KE ++S+R+ E + +Y+ F N RN K
Sbjct: 1 MPVSKRNKVVSLTKVKKQKNSERGREVKEQWMDSVRSVCEEENQHVYLVEFVNQRNSLLK 60
Query: 55 EFREQIKPSRLLWVGRYPMRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFA 114
R+ IKP R +++++L K + +FA
Sbjct: 61 LVRDLIKPGRF--------------------------------ADKLQALLRKVQAKEFA 88
Query: 115 RTGSTATEKVELPEG--PLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLS 172
R G AT+ ++L EG L QF H +E R G+P L G + L+ D+ VC +G+PL+
Sbjct: 89 RAGFVATQSMQLKEGSDALAQFPHSLEQRFRSLGLPTLLKDGKILLLGDYTVCTKGEPLT 148
Query: 173 PESARILRLLGIKMATFKLHLICRW 197
PE A++L+ LG+KMA F + L+ W
Sbjct: 149 PEQAQVLKHLGVKMAEFHIKLLAEW 173
>gi|169779455|ref|XP_001824192.1| mRNA turnover protein MRT4 [Aspergillus oryzae RIB40]
gi|238500101|ref|XP_002381285.1| mRNA turnover protein MRT4 [Aspergillus flavus NRRL3357]
gi|83772931|dbj|BAE63059.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693038|gb|EED49384.1| 60S acidic ribosomal protein P0, putative [Aspergillus flavus
NRRL3357]
gi|391870377|gb|EIT79562.1| protein involved in mRNA turnover [Aspergillus oryzae 3.042]
Length = 247
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 113/233 (48%), Gaps = 29/233 (12%)
Query: 1 MPKSKRDRPVTLSKTKKKG-KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP+SKR R V +KT KK KE + +IR +VE Y ++VF +NMRN K+ R +
Sbjct: 1 MPRSKRARVVHETKTAKKSHKEQTRRLYANIRESVEKYDHLFVFGVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SRL + +G P + +K+ +L G GL T+ E V + F +
Sbjct: 61 FADSRLFFGKTKVMAVALGHNPESEAATNLHKLVPYLTGAVGLLFTSRDPESVTNYFETF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNKG-- 154
DFAR G+ +T +P G + E +H +EP LRK G+P RL KG
Sbjct: 121 RPLDFARAGTVSTRSFSIPNGLVYSRAGEIPASEDEPVSHTIEPELRKLGVPTRLVKGKV 180
Query: 155 VVELVSD---FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
++EL F VC EG+ L +L++ G+ + F + L W+ E E+
Sbjct: 181 MLELTGGQEAFPVCREGEVLDSRQTTLLKMFGVATSEFHVALKACWTRESGEV 233
>gi|255953299|ref|XP_002567402.1| Pc21g03380 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589113|emb|CAP95235.1| Pc21g03380 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 246
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 108/227 (47%), Gaps = 29/227 (12%)
Query: 1 MPKSKRDRPVTLSKTKKKG-KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP+SKR R V SKT KK KE + +IR +E Y ++VF+ +NMRN K+ R +
Sbjct: 1 MPRSKRARVVHESKTAKKDHKEQTRRLFANIRECIEEYDHLFVFAVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLWVGRYPMRYSQAY-----------KVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SR+ + M + K++ FL G GL T+ E V F +
Sbjct: 61 FADSRVFFGKTKVMGKALGTDVESEAAPNLRKLTPFLAGAVGLLFTSRTPESVIEYFETF 120
Query: 109 EDYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVV 156
DFAR G+ AT +P G P EQ +H +EP LRK G+P RL KG V
Sbjct: 121 RPQDFARAGTEATRSFTIPNGLVTARAGEIPAEQDEPVSHTIEPALRKLGVPTRLVKGKV 180
Query: 157 EL-----VSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
L + VC+EG+ L ++++ GI + FK+ L W+
Sbjct: 181 MLELTEGQEGYPVCKEGETLDSRQTTLMKMFGITSSEFKVDLKAYWT 227
>gi|358377876|gb|EHK15559.1| hypothetical protein TRIVIDRAFT_56356 [Trichoderma virens Gv29-8]
Length = 248
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 118/248 (47%), Gaps = 35/248 (14%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + L++ KK +E K+ + +IR V Y+ +VF+ +NMRN K+ R ++
Sbjct: 1 MPKSKRAKVFHLTQVTKKTREQKDQLFQNIREQVPEYQHCFVFNVDNMRNNYLKDVRREL 60
Query: 61 KPSRLLWVGRYPMRYSQAYK-----------VSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
SRL + M + ++ + G GL LTN P + V N
Sbjct: 61 SDSRLFFGKTKLMAKALGQTAEEAIVPGIEGLAPHITGTVGLLLTNRPVDSVLDYLNSIA 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G TA+ +P G P E H +EP LR+ G+P R+ KG V
Sbjct: 121 PVDFARAGVTASRSFTIPPGVVYATGGEVPKENDIPLQHTIEPELRRLGVPTRMVKGKVV 180
Query: 158 LVSD------FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYR----- 206
L + + VC+EG+ L R+L+L + ++ F++ ++ WSA E+
Sbjct: 181 LGDESGEGEGYTVCKEGEVLDSRQTRLLKLFDVCLSEFRVKVLAYWSAATNEVTEIDQAA 240
Query: 207 -EGLDESD 213
+G++E D
Sbjct: 241 MDGVEEED 248
>gi|340504164|gb|EGR30639.1| hypothetical protein IMG5_127430 [Ichthyophthirius multifiliis]
Length = 253
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 127/242 (52%), Gaps = 45/242 (18%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR++ ++L+KTKK HK+ I + + +E Y +I++FS +NM + F++ +++
Sbjct: 1 MPKSKRNKVISLTKTKKNPIGHKQKISSKLNECIEKYDNIFLFSHQNMTTIPFRQIQQEW 60
Query: 61 KPSRL---------LWVGRYPM--RYSQAYKVSKFLCGNTGLFLTNMPKEEVES------ 103
S+ + +GR + +K+S+ + G+ GL T+ EV+
Sbjct: 61 NDSKFFLGKNKVMQVILGRDQQNEQKENLHKLSQQIKGDCGLLFTSKSLNEVQQQKLYNT 120
Query: 104 --------LFNKYEDYDFARTGSTATEKVELPEGP--LEQFTHEMEPFLRKQGMPVRLNK 153
FN+YE ++A+ G+ A E + L + + F+H M+ +LR+ G+ V LNK
Sbjct: 121 QILIQISRYFNEYECLEYAKAGTIADETIILQKDSDVFKTFSHSMDNYLRQLGIDVMLNK 180
Query: 154 GVVELVSDFVVCEEGKPLSPESARIL------------------RLLGIKMATFKLHLIC 195
G +++ +DF++C++GK ++ E A+IL +LL K A FK+ L C
Sbjct: 181 GELQIQTDFILCQKGKAINTEQAKILVKNQNIYKTIIYLLKQNQKLLKQKKAQFKIILKC 240
Query: 196 RW 197
+
Sbjct: 241 YY 242
>gi|301768423|ref|XP_002919633.1| PREDICTED: LOW QUALITY PROTEIN: mRNA turnover protein 4 homolog
[Ailuropoda melanoleuca]
Length = 242
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSI-YVFSFENMRNLKFKEFREQ 59
MPKS+RD+ V+L+ T KKG E K+ + ++ V+ YK + ++FS NMR K K+
Sbjct: 1 MPKSERDKKVSLTGTAKKGLELKQNLTEELQRHVDTYKYLLFIFSVANMRXSKLKDVWTA 60
Query: 60 IKPSRLLWV--GRYPMRY------------SQAYKVSKFLCGNTGLFLTNMPKEEVESLF 105
K S WV G++ + +VSK G GL T KEEV F
Sbjct: 61 WKHS---WVFFGKHKVMTVALDGSPSDECKDNLSQVSKKWRGEVGLLATKRTKEEVYGGF 117
Query: 106 NKYEDYDFARTGSTATEKVEL-PEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVV 164
K+ + DF G AT + L P GP H MEP R+ G+ L +GVV L+SD V
Sbjct: 118 MKHMEMDFTGVGDKATFTMSLAPGGPGAAPHHTMEPRQRQLGLLTALKRGVVTLLSDQEV 177
Query: 165 CEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
C+EG LSPE A L G +MA K+ + W A+
Sbjct: 178 CKEGDVLSPEQAHEPELFGCEMAESKVTIKYMWDAQ 213
>gi|67541464|ref|XP_664506.1| hypothetical protein AN6902.2 [Aspergillus nidulans FGSC A4]
gi|40739111|gb|EAA58301.1| hypothetical protein AN6902.2 [Aspergillus nidulans FGSC A4]
gi|259480503|tpe|CBF71694.1| TPA: 60S acidic ribosomal protein P0, putative (AFU_orthologue;
AFUA_5G13470) [Aspergillus nidulans FGSC A4]
Length = 246
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 113/227 (49%), Gaps = 29/227 (12%)
Query: 1 MPKSKRDRPVTLSKTKKKG-KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP+SKR R V SKT KK KE + +IR VE Y ++VFS +NMRN K+ R +
Sbjct: 1 MPRSKRARIVHESKTAKKSHKEQTRRLYANIRECVEKYDHLFVFSVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLW---------VGRYPMRYS--QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SRL + +G P + + ++ +L G GL T+ V F+ +
Sbjct: 61 FADSRLFFGKTKVMAVALGHNPETEAAENLHLLTPYLTGAVGLLFTSRDPASVTDYFDAF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNKGVV 156
DFAR G+ AT +P G + E +H +EP LRK G+P RL KG V
Sbjct: 121 RPLDFARAGTEATRSFSIPAGLVYSRAGEIPTSEDEPVSHTIEPELRKLGVPTRLVKGKV 180
Query: 157 EL-VSD----FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
L ++D + VC++G+ L +L++ G++ + F++ L W+
Sbjct: 181 MLELTDGQEGYPVCKKGEILDSRQTTLLKMFGVQTSEFRVGLKAHWA 227
>gi|154283071|ref|XP_001542331.1| mRNA turnover protein MRT4 [Ajellomyces capsulatus NAm1]
gi|150410511|gb|EDN05899.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|225561664|gb|EEH09944.1| mRNA turnover protein [Ajellomyces capsulatus G186AR]
Length = 243
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 111/228 (48%), Gaps = 27/228 (11%)
Query: 1 MPKSKRDRPVTLSK-TKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP SKR R V SK TKK KE + +I+ AV Y +++FS +NMRN K+ R +
Sbjct: 1 MPVSKRARVVHESKVTKKSHKEQTRRLFANIQTAVTQYDHLFLFSVDNMRNTYLKDVRSE 60
Query: 60 IKPSRLLW---------VGRYPMRYSQAY--KVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SRL + +G P K++ +L G GL T+ + V F+ +
Sbjct: 61 FADSRLFFGKTKVMAVALGNTPETACAPNLEKLAPYLTGAVGLLFTSRSPQSVLDFFDSF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNKG-- 154
DFAR G+ A +P G + +H +EP LRK G+P RL G
Sbjct: 121 HPTDFARAGAVAPRSFTIPSGIVYSQAGEVSSSLDAPLSHTIEPTLRKLGVPTRLIGGKV 180
Query: 155 VVELVSD-FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAED 201
V+E+ D + VC+ G+ L +L++ G+ +A F++ + +W+ ED
Sbjct: 181 VLEMDGDGYQVCKAGETLDSRQTTLLKIFGVAVAEFRVEMKAQWNRED 228
>gi|261189729|ref|XP_002621275.1| mRNA turnover protein MRT4 [Ajellomyces dermatitidis SLH14081]
gi|239591511|gb|EEQ74092.1| 60S acidic ribosomal protein P0 [Ajellomyces dermatitidis SLH14081]
Length = 242
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 109/228 (47%), Gaps = 27/228 (11%)
Query: 1 MPKSKRDRPVTLSKTKKKG-KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP SKR R V SK KK KE + +I+ AV Y I++FS +NMRN K+ R +
Sbjct: 1 MPVSKRARLVHESKVAKKSHKEQTRRLFANIQTAVTQYDHIFLFSVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLW---------VGRYPMRYSQAY--KVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SRL + +G P K+S +L G GL T+ + V F+ +
Sbjct: 61 FSDSRLFFGKTKVMAVALGNTPETACAPNLEKLSPYLTGAVGLLFTSRSPQSVLDFFDSF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNKG-- 154
DFAR G+ +P G + E +H +EP LRK G+P RL G
Sbjct: 121 HPTDFARAGTVTPRSFTIPSGIVYSHAGEVPSNLDEPLSHTIEPTLRKLGVPTRLIAGKV 180
Query: 155 VVELVSD-FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAED 201
V+E+ D + VC+ G L +L++ G+ +A F++ + +W+ +D
Sbjct: 181 VLEMDGDGYQVCKAGDTLDSRQTTLLKIFGVAVAEFRVEMKAQWNRQD 228
>gi|328849725|gb|EGF98900.1| hypothetical protein MELLADRAFT_76009 [Melampsora larici-populina
98AG31]
Length = 234
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 114/220 (51%), Gaps = 20/220 (9%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR V L+KT KK KE K +++ ++ A + +K ++F+ +++R +E R
Sbjct: 1 MPKSKRATIVHLTKTTKKTKEAKGKLIDDLKAATDEFKYAWLFTVDHVRTTYLQEIRSAW 60
Query: 61 KPSRLLWVGRYPMRYSQAYK-----------VSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
KP+R+ MR + + + L G+TGL T+ + V F+ +
Sbjct: 61 KPARIFLGRNAVMRLALGSTPENEHMPGTGVLGRLLEGDTGLLFTDEDPKVVIEWFDDFV 120
Query: 110 DYDFARTGSTATEKVELPEGP--LEQFTHE-------MEPFLRKQGMPVRLNKGVVELVS 160
D+AR G+ ATE VELP GP +++ + MEP LR G+P L +GV L S
Sbjct: 121 RDDYARKGNVATETVELPAGPVMIKEINDDPSVAPGAMEPHLRALGLPTTLQRGVPTLTS 180
Query: 161 DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
+ VC EG LS + A +L+ LG + A FK+ L W E
Sbjct: 181 SYKVCSEGATLSTQQAGLLKTLGHQQAKFKVVLRNVWVKE 220
>gi|239612960|gb|EEQ89947.1| 60S acidic ribosomal protein P0 [Ajellomyces dermatitidis ER-3]
gi|327352133|gb|EGE80990.1| 60S acidic ribosomal protein P0 [Ajellomyces dermatitidis ATCC
18188]
Length = 242
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 1 MPKSKRDRPVTLSKTKKKG-KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP SKR R V SK KK KE + +I+ AV Y I++FS +NMRN K+ R +
Sbjct: 1 MPISKRARLVHESKVAKKSHKEQTRRLFANIQTAVTQYDHIFLFSVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLW---------VGRYPMRYSQAY--KVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SRL + +G P K+S +L G GL T+ + V F+ +
Sbjct: 61 FSDSRLFFGKTKVMAVALGNTPETACAPNLEKLSPYLTGAVGLLFTSRSPQSVLDFFDSF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNKGVV 156
DFAR G+ +P G + E +H +EP LRK G+P RL G V
Sbjct: 121 HPTDFARAGTVTPRSFTIPSGIVYSHAGEVPSNLDEPLSHTIEPTLRKLGVPTRLIAGKV 180
Query: 157 ELVSD---FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAED 201
L D + VC+ G L +L++ G+ +A F++ + +W+ +D
Sbjct: 181 VLEMDGDGYQVCKAGDTLDSRQTTLLKIFGVAVAEFRVEMKAQWNRQD 228
>gi|325091103|gb|EGC44413.1| mRNA turnover protein [Ajellomyces capsulatus H88]
Length = 243
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 111/228 (48%), Gaps = 27/228 (11%)
Query: 1 MPKSKRDRPVTLSK-TKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP SKR R V SK TKK KE + +I+ A+ Y +++FS +NMRN K+ R +
Sbjct: 1 MPVSKRARVVHESKVTKKSHKEQTRRLFANIQTAITQYDHLFLFSVDNMRNTYLKDVRSE 60
Query: 60 IKPSRLLW---------VGRYPMRYSQAY--KVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SRL + +G P K++ +L G GL T+ + V F+ +
Sbjct: 61 FADSRLFFGKTKVMAVALGNTPETACAPNLEKLAPYLTGAVGLLFTSRSPQSVLDFFDSF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNKG-- 154
DFAR G+ A +P G + +H +EP LRK G+P RL G
Sbjct: 121 HPTDFARAGAVAPRSFTIPSGIVYSQAGEVSSSLDAPLSHTIEPTLRKLGVPTRLIGGKV 180
Query: 155 VVELVSD-FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAED 201
V+E+ D + VC+ G+ L +L++ G+ +A F++ + +W+ ED
Sbjct: 181 VLEMDGDGYQVCKAGETLDSRQTTLLKIFGVAVAEFRVEMKAQWNRED 228
>gi|240275268|gb|EER38782.1| mRNA turnover protein [Ajellomyces capsulatus H143]
Length = 243
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 109/228 (47%), Gaps = 27/228 (11%)
Query: 1 MPKSKRDRPVTLSK-TKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP SKR R V SK TKK KE + +I+ A+ Y +++FS +NMRN K+ R +
Sbjct: 1 MPVSKRARVVHESKVTKKSHKEQTRRLFANIQTAITQYDHLFLFSVDNMRNTYLKDVRSE 60
Query: 60 IKPSRLLW---------VGRYPMRYSQAY--KVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
SRL + +G P K++ +L G GL T+ + V F+ +
Sbjct: 61 FADSRLFFGKTKVMAVALGNTPETACAPNLEKLAPYLTGAVGLLFTSRSPQSVLDFFDSF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNKGVV 156
DFAR G+ A +P G + +H +EP LRK G+P RL G V
Sbjct: 121 HPTDFARAGAVAPRSFTIPSGIVYSQACEVSSSLDAPLSHTIEPTLRKLGVPTRLIGGKV 180
Query: 157 ELVSD---FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAED 201
L D + VC+ G+ L +L++ G+ +A F++ + +W+ ED
Sbjct: 181 VLEMDGDGYQVCKAGETLDSRQTTLLKIFGVAVAEFRVEMKAQWNRED 228
>gi|260941546|ref|XP_002614939.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238851362|gb|EEQ40826.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 231
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 24/228 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKGKE+K I + +R A++ +K ++V +++R ++ R
Sbjct: 1 MPRSKRSKLVTLAQTDKKGKENKARIFDEVREALDEFKYVWVLQLDDVRTPVLQDIRSDW 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ +G P +K++K G +GL TN E VE+ FN Y
Sbjct: 61 VGSKLMLGKRRVLEKALGDTPAEEYKDNLHKLAKLCSGVSGLLFTNETPETVEAYFNAYT 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLR-KQGMPVRLNKGVV 156
D+ R S A +PEG P+E+ +H +E LR K +P ++ G +
Sbjct: 121 KADYCRAKSKAPIDFTIPEGIVYSRGGQIPIEEDVPMSHSLEETLRNKYKIPTKIKSGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
+ FVVC +G L A IL+ G+ + FK+ +I + E E+
Sbjct: 181 FINEPFVVCTKGDTLDVTQALILKQFGVAASEFKVKMIAYYDGESCEV 228
>gi|254578038|ref|XP_002495005.1| mRNA turnover protein MRT4 [Zygosaccharomyces rouxii CBS 732]
gi|238937895|emb|CAR26072.1| ZYRO0B01210p [Zygosaccharomyces rouxii]
Length = 236
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 119/234 (50%), Gaps = 24/234 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKG+E+KE I + +R A++ YK ++V +++R +E R
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDTYKYVWVLKLDDVRTPVLQEIRTSW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ R + + +K++ G TGL T+ + V+ F Y+
Sbjct: 61 AGSKLIMGRRKVLEKALGTTKEEEYRDNLHKLTSHCQGVTGLLFTDESVDTVKGFFETYQ 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQ-GMPVRLNKGVV 156
D++R S A +P G P ++ H +EP +R + +P R+ KG +
Sbjct: 121 RLDYSRPNSAAPLTFVIPAGVVYSRGGQIPEDEDVPMVHSLEPTMRNKFNIPTRIQKGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
L S + VCEEG+ L A IL+ GI +A FK+ + + +E ++ G++
Sbjct: 181 TLDSPYKVCEEGEKLDVRQALILKQFGIALAEFKVKVAAYFDSESSKVEEVGIN 234
>gi|340518499|gb|EGR48740.1| hypothetical protein TRIREDRAFT_107335 [Trichoderma reesei QM6a]
Length = 248
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 111/233 (47%), Gaps = 29/233 (12%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + L++ KK +E K+ + +IR V Y+ VF+ +NMRN K+ R ++
Sbjct: 1 MPKSKRAKVFHLTQVTKKTREQKDQLFQNIREQVPEYQHCIVFNVDNMRNNYLKDVRREL 60
Query: 61 KPSRLLWVGRYPMRYSQAYK-----------VSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
SRL + M + ++ + G GL LTN P + V +
Sbjct: 61 SDSRLFFGKTKLMAKALGQTAEEAIVPGIEGLAPHITGTVGLLLTNRPVDSVLDYLSGIA 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVVE 157
DFAR G A+ +P G P E TH +EP LR+ G+P R+ KG V
Sbjct: 121 PVDFARAGVAASRSFTIPPGVVYATAGEVPKENDVPLTHTIEPELRRLGVPTRMVKGKVV 180
Query: 158 LVSD------FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
L + +VVC+EG+ L R+L+L + ++ F++ + WSA E+
Sbjct: 181 LGDENGEGEGYVVCKEGEILDSRQTRLLKLFDVCLSEFRIKPLAYWSAATNEV 233
>gi|45185241|ref|NP_982958.1| mRNA turnover protein MRT4 [Ashbya gossypii ATCC 10895]
gi|51316302|sp|Q75DK9.1|MRT4_ASHGO RecName: Full=mRNA turnover protein 4 homolog
gi|44980899|gb|AAS50782.1| ABR012Cp [Ashbya gossypii ATCC 10895]
gi|374106161|gb|AEY95071.1| FABR012Cp [Ashbya gossypii FDAG1]
Length = 236
Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 113/228 (49%), Gaps = 32/228 (14%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T+KKG+E+KE I + +R A++ Y+ ++V E++R +E R
Sbjct: 1 MPRSKRSKLVTLAQTEKKGRENKERIFDEVRQALDTYRYVWVLRLEDVRTPVLQEIRSAW 60
Query: 61 KPSRLLWVGR---------------YPMRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLF 105
S+L+ +GR Y S K + +C GL T+ E V + F
Sbjct: 61 AGSKLI-MGRRKVLEKALGGTRETEYKENVSGLVKQCEGMC---GLLFTDETPETVTAYF 116
Query: 106 NKYEDYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQ-GMPVRLN 152
+Y D++R S A +VE+P G P E H +EP LR + MP R+
Sbjct: 117 REYRKADYSRAKSRAPLRVEIPAGVVYSRGGQVPAEDDVPMVHSLEPTLRNKFKMPTRIQ 176
Query: 153 KGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
G + L ++VCE G+ L A IL+ G+ A F++ L + E
Sbjct: 177 NGKITLEQPYLVCEAGETLDVRQALILKQFGVAAAEFRVKLAAYYDGE 224
>gi|326480342|gb|EGE04352.1| mRNA turnover protein 4 [Trichophyton equinum CBS 127.97]
Length = 244
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 115/234 (49%), Gaps = 33/234 (14%)
Query: 1 MPKSKRDRPVTLSKTKKKG-KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP SKR + + S+T+KK KE + +++ AVE Y ++VF+ +NMRN K+ R +
Sbjct: 1 MPISKRAKVIHESRTQKKSHKEQTRRLYANVQAAVEEYDHLFVFAVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLW---------VGRYPMRYSQAY-----KVSKFLCGNTGLFLTNMPKEEVESLF 105
SRL + +G P AY ++S +L G GL T+ + V F
Sbjct: 61 FSDSRLFFGKTKVMAIALGTTP---ETAYAPNLNRLSPYLTGAVGLLFTSRDPQSVLDFF 117
Query: 106 NKYEDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNK 153
+ DFAR G+ +P G + E +H +EP LRK +P RL K
Sbjct: 118 ESFHPIDFARAGNITPRSFTIPSGVVYSRAGEIPAEDDEPLSHTIEPTLRKLNVPTRLVK 177
Query: 154 G--VVELVSD-FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
G ++E+ D + VC+ G+ L + +L++ G+ +A FK+ + RW E E+
Sbjct: 178 GKVMLEMEGDGYRVCKAGEELDSRQSTLLKMFGVAVAEFKVEMKARWEKESGEV 231
>gi|367000505|ref|XP_003684988.1| mRNA turnover protein MRT4 [Tetrapisispora phaffii CBS 4417]
gi|357523285|emb|CCE62554.1| hypothetical protein TPHA_0C04040 [Tetrapisispora phaffii CBS 4417]
Length = 238
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 115/224 (51%), Gaps = 24/224 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKG+E+KE I + IR +++ ++ ++ +++R ++ R
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEIRESLDTFRYCWILYLDDVRTPVLQDIRTAW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ R + + +K+SK G TGL TN E ++ F Y
Sbjct: 61 TGSKLILGKRKVLEKALGENRENEYKENIFKLSKLCKGVTGLLFTNEDVETTKAYFESYT 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQ-GMPVRLNKGVV 156
D++R S A +PEG P+E+ H +EP LR + +P ++ G +
Sbjct: 121 RMDYSRPNSRAPLTFTIPEGIVYSRGGQVPIEEDVPMVHSLEPTLRNKFEIPTKIKAGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
L + ++VCEEGK L + A IL+ G+ + FK+ ++ + E
Sbjct: 181 TLEAPYLVCEEGKKLDVKQALILKQFGVAASEFKVKVVAYYDNE 224
>gi|296816262|ref|XP_002848468.1| mRNA turnover protein MRT4 [Arthroderma otae CBS 113480]
gi|238841493|gb|EEQ31155.1| mRNA turnover protein 4 [Arthroderma otae CBS 113480]
Length = 244
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 112/234 (47%), Gaps = 33/234 (14%)
Query: 1 MPKSKRDRPVTLSKT-KKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP SKR + V S+T KK KE + +++ AV Y ++VFS +NMRN K+ R +
Sbjct: 1 MPISKRAKVVHESRTLKKSHKEQTRRLYANVQAAVTEYDHLFVFSVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLW---------VGRYPMRYSQAY-----KVSKFLCGNTGLFLTNMPKEEVESLF 105
SRL + +G P AY +++ +L G GL T+ + V F
Sbjct: 61 FADSRLFFGKTKVMAIALGTTP---ETAYAPNLDRLTPYLTGAVGLLFTSREPQSVLDYF 117
Query: 106 NKYEDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNK 153
+ DFAR G+ + +P G + E +H +EP LRK +P RL K
Sbjct: 118 ESFHPLDFARAGNISPRSFTIPSGVVYSRAGEIPAEDDEPISHTVEPTLRKLNVPTRLVK 177
Query: 154 GVVELVSD---FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
G V L D + VC+ G+ L + +L++ G+ +A FK+ + RW E E+
Sbjct: 178 GKVTLEMDGDGYQVCKAGEELDSRQSTLLKMFGVAVAEFKVEMKARWVKESGEV 231
>gi|444722470|gb|ELW63162.1| mRNA turnover protein 4 like protein [Tupaia chinensis]
Length = 162
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 78/132 (59%)
Query: 79 YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEM 138
++VSK L G GL T+ KEE+ F + + D+ R G+ A V L GPLEQ H +
Sbjct: 17 HQVSKKLRGEVGLLFTSRTKEEMNDWFTNHTEMDYGRPGNKAAFTVSLDPGPLEQLPHSL 76
Query: 139 EPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
EP LR+ G+P L + VV L+SD+ VC+ G L+ E ARIL+LLG +MA F++ + W
Sbjct: 77 EPQLRQLGLPTALRRCVVTLLSDYEVCKAGDVLTSEQARILKLLGYEMAEFRVTMKYMWD 136
Query: 199 AEDFELYREGLD 210
A+ + G D
Sbjct: 137 AQSGRFQQVGDD 148
>gi|440302905|gb|ELP95211.1| mRNA turnover protein 4 mrt4, putative [Entamoeba invadens IP1]
Length = 224
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 112/203 (55%), Gaps = 13/203 (6%)
Query: 13 SKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFR-EQIKPSRLLWVGRY 71
K K+ +E K+ ++++I+ A +NY ++++F MRN KE R +++ S +
Sbjct: 6 QKRKQPKREVKDKLISNIQEAAQNYPNLFLFYSPVMRNNFMKEIRHDRVDDSIFFFGSNK 65
Query: 72 PMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTA 120
M+ + A+ +++ L G GL T + K+E+ F + DFA++G TA
Sbjct: 66 VMQVALGRTADDEVKVGAHLIAEILKGQCGLCFTKLSKDELMKYFKTQKKEDFAKSGFTA 125
Query: 121 TEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILR 180
+PEGPL QF ME LR Q +PV L GV+ ++VVC++G L+ +SA++L+
Sbjct: 126 LSDFVVPEGPL-QFPGSMEVELRTQHLPVELKDGVLYNKDEYVVCKKGTQLTTQSAQLLK 184
Query: 181 LLGIKMATFKLHLICRWSAEDFE 203
G+KMA F++H++ +FE
Sbjct: 185 HFGVKMAQFEIHIVAFLENGNFE 207
>gi|302497285|ref|XP_003010643.1| hypothetical protein ARB_03344 [Arthroderma benhamiae CBS 112371]
gi|291174186|gb|EFE30003.1| hypothetical protein ARB_03344 [Arthroderma benhamiae CBS 112371]
Length = 244
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 115/234 (49%), Gaps = 33/234 (14%)
Query: 1 MPKSKRDRPVTLSKTKKKG-KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP SKR + + S+T+KK KE + +++ AVE Y ++VF+ +NMRN K+ R +
Sbjct: 1 MPISKRAKVIHESRTQKKSHKEQTRRLYANVQAAVEEYDHLFVFAVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLW---------VGRYPMRYSQAY-----KVSKFLCGNTGLFLTNMPKEEVESLF 105
SRL + +G P AY ++S +L G GL T+ + V F
Sbjct: 61 FSDSRLFFGKTKVMAIALGTTP---ETAYAPNLNRLSPYLTGAVGLLFTSRDPQSVLDFF 117
Query: 106 NKYEDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNK 153
+ DFAR G+ +P G + E +H +EP LRK +P RL K
Sbjct: 118 ESFHPIDFARAGNITPRSFTIPSGVVYSRAGEIPAEDDEPISHTIEPTLRKLNVPTRLVK 177
Query: 154 G--VVELVSD-FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
G ++E+ D + VC+ G+ L + +L++ G+ +A FK+ + RW + E+
Sbjct: 178 GKVMLEMEGDGYQVCKAGEELDSRQSTLLKMFGVAVAEFKVEMKARWEKKSGEV 231
>gi|403214468|emb|CCK68969.1| hypothetical protein KNAG_0B05360 [Kazachstania naganishii CBS
8797]
Length = 236
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 114/234 (48%), Gaps = 24/234 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKG+E+KE I + +R A++ Y+ ++V +++R +E R
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDTYRYVWVLHLDDVRTPVLQEIRTAW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ + + + +K+S L G GL TN V+ F Y
Sbjct: 61 VGSKLIMGKKKVLAKALGENKESEYKDNIFKLSHCLTGVVGLLFTNEEVNTVKDYFKSYS 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQ-GMPVRLNKGVV 156
D++R S A +PEG P+E H MEP LR + +P ++ G +
Sbjct: 121 RSDYSRPNSKAPLDFTIPEGIVYSRGGQIPVEDDVPMVHSMEPTLRNKFHIPTKIKAGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
L F VCEEG+ L IL+ GI A FK+ + + E ++ + G++
Sbjct: 181 TLEQPFKVCEEGQKLDVTQTLILKQFGIAAAQFKVKVEAYYDNETSKIEKVGIN 234
>gi|212723410|ref|NP_001132573.1| ribosomal protein L10 homolog [Zea mays]
gi|194694772|gb|ACF81470.1| unknown [Zea mays]
gi|414882022|tpg|DAA59153.1| TPA: hypothetical protein ZEAMMB73_797802 [Zea mays]
Length = 116
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 79/115 (68%), Gaps = 13/115 (11%)
Query: 1 MPKSKRDRPVTLSKTKKK-GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKR+RPVTLSKTKKK G E K +V I++AV+ Y S YVF+++NMRN K K+ REQ
Sbjct: 1 MPKSKRNRPVTLSKTKKKPGLERKGKVVAEIKDAVDKYSSAYVFTYDNMRNQKLKDLREQ 60
Query: 60 IKPSRLLW----------VGRYPMRYSQA--YKVSKFLCGNTGLFLTNMPKEEVE 102
+K S ++ +GR P ++ +K+SKFL GN+GL TN+P+++VE
Sbjct: 61 LKSSSRIFLAGKKVMQIALGRSPADEAKTGLHKLSKFLQGNSGLLFTNLPRDDVE 115
>gi|123505551|ref|XP_001329001.1| MGC89995 protein [Trichomonas vaginalis G3]
gi|121911951|gb|EAY16778.1| MGC89995 protein, putative [Trichomonas vaginalis G3]
Length = 211
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
Query: 16 KKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLL--------- 66
+KK KE K +IR AV + IYV F + R + S L
Sbjct: 11 QKKTKEEKVQRGEAIREAVTKFDRIYVLRFSSESTEPQTALRRNFRSSNLCRDKKTIISH 70
Query: 67 WVGRYPMRYSQA--YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKV 124
+G P ++ + ++L GNTGLF+TN V +FA+ G ATE
Sbjct: 71 SIGATPETEARPGLSGLLQYLAGNTGLFMTNEDDNTVREYLQSMTQPEFAKAGFIATEDF 130
Query: 125 ELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
+PEGPL QFT M+ +LR+ G+PV+L G + V D VC G+PL+ A++L+ I
Sbjct: 131 TVPEGPLPQFTFSMDGYLRELGLPVQLENGTIFNVRDHKVCTAGEPLTKNQAQLLKHFNI 190
Query: 185 KMATFKLHLICRW 197
KM T+K+ + W
Sbjct: 191 KMDTYKVEPVAVW 203
>gi|315042125|ref|XP_003170439.1| mRNA turnover protein MRT4 [Arthroderma gypseum CBS 118893]
gi|311345473|gb|EFR04676.1| mRNA turnover protein 4 [Arthroderma gypseum CBS 118893]
Length = 244
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 113/231 (48%), Gaps = 27/231 (11%)
Query: 1 MPKSKRDRPVTLSKTKKKG-KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP SKR + V S+T+KK KE + +++ AVE Y ++VF+ +NMRN K+ R +
Sbjct: 1 MPISKRAKVVHESRTQKKSHKEQTRRLYANVQAAVEEYDHLFVFAVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLW---------VGRYPMRYSQAY--KVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
RL + +G P ++S++L G GL T+ + V F +
Sbjct: 61 FSDGRLFFGKTKVMAIALGTTPETACAPNLERLSRYLTGAVGLLFTSREPQSVLDFFESF 120
Query: 109 EDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNKG-- 154
DFAR G+ +P G + E +H +EP LRK +P RL KG
Sbjct: 121 HPIDFARAGNVTPRAFTIPSGVVYSRAGEIPAEDDEPISHTIEPTLRKLNVPTRLVKGKV 180
Query: 155 VVELVSD-FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
++E+ D + VC+ G+ L + +L++ G+ +A FK+ + RW + E+
Sbjct: 181 MLEMEGDGYQVCKAGEELDSRQSTLLKMFGVAVAEFKVEMKARWEKKSGEV 231
>gi|441671201|ref|XP_003271587.2| PREDICTED: mRNA turnover protein 4 homolog [Nomascus leucogenys]
Length = 144
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 69/106 (65%)
Query: 105 FNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVV 164
F KY + D+AR G+TA V L GPLEQF H MEP LR+ G+P L +GVV L+SD+ V
Sbjct: 21 FTKYTEMDYARAGNTAAFPVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEV 80
Query: 165 CEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
C+EG L+PE ARIL+L G +MA FK+ + W ++ + G D
Sbjct: 81 CKEGDVLTPEQARILKLFGYEMAEFKVTVKYMWDSQSGSFQQMGDD 126
>gi|156848997|ref|XP_001647379.1| hypothetical protein Kpol_1018p53 [Vanderwaltozyma polyspora DSM
70294]
gi|156118065|gb|EDO19521.1| hypothetical protein Kpol_1018p53 [Vanderwaltozyma polyspora DSM
70294]
Length = 236
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 114/228 (50%), Gaps = 24/228 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTLS+T KKG+E+KE I + +R A++ YK +++ +++R +E R
Sbjct: 1 MPRSKRSKLVTLSQTDKKGRENKERIFDEVRTALDTYKYVWILYLDDVRTPVLQEIRTAW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ R + + +K++K G TGLF TN + ++ F Y
Sbjct: 61 TGSKLILGKRKVLEKALGTTREDEYKENLHKLTKECNGVTGLFFTNEDIDTFQNYFKSYT 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLR-KQGMPVRLNKGVV 156
D +R S A +PEG P+E H +EP LR K +P ++ G +
Sbjct: 121 RMDCSRPNSKAPLTFVIPEGIVYSRGGQIPVEDDVPMVHSLEPTLRNKLEIPTKIKAGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
+ S ++VC EG L A IL+ G+ A FK+ + + E+ ++
Sbjct: 181 TIESPYLVCNEGDKLDVRQALILKQFGVAAAKFKVRVAAYYDNEESKM 228
>gi|327292646|ref|XP_003231021.1| mRNA turnover protein MRT4 [Trichophyton rubrum CBS 118892]
gi|326466827|gb|EGD92280.1| 60S acidic ribosomal protein P0 [Trichophyton rubrum CBS 118892]
Length = 244
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 114/234 (48%), Gaps = 33/234 (14%)
Query: 1 MPKSKRDRPVTLSKTKKKG-KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP SKR + + S+T+KK KE + +++ AVE Y ++VF+ +NMRN K+ R +
Sbjct: 1 MPISKRAKVIHESRTQKKSHKEQTRRLYANVQAAVEEYDHLFVFAVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLW---------VGRYPMRYSQAYK-----VSKFLCGNTGLFLTNMPKEEVESLF 105
SRL + +G P AY +S +L G GL T+ + V F
Sbjct: 61 FSDSRLFFGKTKVMAIALGTTP---ETAYAPNLNLLSPYLTGAVGLLFTSRDPQSVLDFF 117
Query: 106 NKYEDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNK 153
+ DFAR G+ +P G + E +H +EP LRK +P RL K
Sbjct: 118 ESFHPIDFARAGNITPRSFTIPSGVVYSRAGEIPAEDDEPISHTIEPTLRKLNVPTRLVK 177
Query: 154 G--VVELVSD-FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
G ++E+ D + VC+ G+ L + +L++ G+ +A FK+ + RW + E+
Sbjct: 178 GKVMLEMEGDGYQVCKAGEELDSRQSTLLKMFGVAVAEFKVEMKARWEKKSGEV 231
>gi|365981905|ref|XP_003667786.1| hypothetical protein NDAI_0A03860 [Naumovozyma dairenensis CBS 421]
gi|343766552|emb|CCD22543.1| hypothetical protein NDAI_0A03860 [Naumovozyma dairenensis CBS 421]
Length = 238
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 113/224 (50%), Gaps = 24/224 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKG+E+KE I + IR A++ Y+ ++V +N+R +E R
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEIREALDTYRYVWVLYLDNVRTPVLQEIRTAW 60
Query: 61 KPSRLLWVGRYPM------RYSQAY-----KVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ + + + + Y K++K G TGL TN + V+S F Y
Sbjct: 61 AGSKLIMGKKKVLAKALGEKREEEYKENLSKLAKLCTGMTGLLFTNEEVDTVKSYFEAYV 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLR-KQGMPVRLNKGVV 156
D++R S A +PEG P+E H +EP LR K +P ++ G +
Sbjct: 121 KLDYSRPNSRAPLTFVIPEGIIYSRGGQIPIEDDIPMVHSLEPTLRNKYEIPTKIKAGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
+ + + VCE+G L A IL+ GI + FK+ L + E
Sbjct: 181 TIDTPYSVCEKGDKLDVRQALILKQFGIAESEFKVKLAAYFDNE 224
>gi|452820695|gb|EME27734.1| 60S acidic ribosomal protein PO [Galdieria sulphuraria]
Length = 218
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 109/211 (51%), Gaps = 12/211 (5%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP S+R + + K K ++ I+ ++ N ++ YKSIY+ +F+ +R+ KE R
Sbjct: 1 MPTSRRRKNGIIKKQAKNRRQSNADIIEAVTNCLQAYKSIYILNFDCIRSSIMKELRNNW 60
Query: 61 KPSRLLWVGRYPMRYSQA-----------YKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
K SR + MRY ++++ FL GN G+ T+ +++V F+ +
Sbjct: 61 KDSRFFFGKNKVMRYVLGKTEEEEPYKGLHQLAPFLSGNIGVLFTSRTRDQVHDFFDNFI 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGK 169
++ R GS A V L GP++ E+EP LR+ G+P+++ + L SD + +E
Sbjct: 121 VNEYPRIGSRAPRDVVLNAGPVD-IPVELEPRLRELGLPIQVQNNEIFLTSDVPLFQENS 179
Query: 170 PLSPESARILRLLGIKMATFKLHLICRWSAE 200
+S ESA+IL L + + ++ ++ W +E
Sbjct: 180 VISRESAKILETLCMPILEARVEIVAEWDSE 210
>gi|358331559|dbj|GAA50352.1| mRNA turnover protein 4 [Clonorchis sinensis]
Length = 215
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 76/121 (62%)
Query: 81 VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP 140
+SKF+ G L LTN+ E+ F+ +FAR G A + V L GP +FTH +EP
Sbjct: 41 LSKFIKGQCALLLTNLSVRELREKFDALRSSEFARPGVPAPQTVTLAAGPCHKFTHTLEP 100
Query: 141 FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
+LR+ G+PV+L +GVV L D++ C+ + L+PE R+L+L ++++ F++ +I WS E
Sbjct: 101 YLRQLGLPVKLVRGVVILEEDYIACKRDQELTPEQCRVLKLFELQLSEFRVAIIASWSEE 160
Query: 201 D 201
+
Sbjct: 161 E 161
>gi|126138682|ref|XP_001385864.1| mRNA turnover protein MRT4 [Scheffersomyces stipitis CBS 6054]
gi|126093142|gb|ABN67835.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 232
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 119/230 (51%), Gaps = 24/230 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKGKE+K I + +R+A++ ++ ++V +++R ++ R
Sbjct: 1 MPRSKRSKLVTLAQTDKKGKENKTRIFDDVRSALDEFQFVWVLQLDDVRTPVLQDIRSDW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ R + + +K+SK G GL TN E V++ F Y
Sbjct: 61 SGSKLILGKRRVLEKALGDTPEEEYKDNLHKLSKTCTGLPGLLFTNETPETVQAYFTAYS 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLR-KQGMPVRLNKGVV 156
D++R S A +PEG P+E+ +H +E LR K +P ++ G +
Sbjct: 121 KADYSRAKSKAPIDFTIPEGIVYSRGGQVPIEEDVPMSHSLEETLRNKLKVPTKIKAGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYR 206
+ +VVC +G+ L A IL+ G+ + FK++++ ++ E+ E+ +
Sbjct: 181 TMNEPYVVCHKGETLDVRQALILKQFGVAASEFKVNVVAYYNNENSEVTK 230
>gi|50304371|ref|XP_452135.1| mRNA turnover protein MRT4 [Kluyveromyces lactis NRRL Y-1140]
gi|49641267|emb|CAH02528.1| KLLA0B13563p [Kluyveromyces lactis]
Length = 238
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKG+E+KE I + +R A+++++ +V E++R +E R
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDSFRYAWVLHLEDVRTPVLQEIRSSW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ R + + K+ K G TGL TN P + VE F Y
Sbjct: 61 VGSKLIMGKRKVLVKALGEKPEEEYKENLAKLCKHCSGVTGLLFTNEPVDVVEDYFKAYV 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQ-GMPVRLNKGVV 156
DF+R S A +P G P E+ H +EP LR + +P ++ G +
Sbjct: 121 RADFSRPKSKAPLSFTIPAGIVYSRGGQIPEEEDVPMIHSLEPTLRNKFKIPTKIKNGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
+ S ++VCE+GK L A IL+ GI A F++ + + E
Sbjct: 181 TIESPYLVCEKGKTLDVTQALILKQFGIAAAEFRVKVAAYYDNE 224
>gi|367008632|ref|XP_003678817.1| mRNA turnover protein MRT4 [Torulaspora delbrueckii]
gi|359746474|emb|CCE89606.1| hypothetical protein TDEL_0A02740 [Torulaspora delbrueckii]
Length = 238
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 24/234 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL+ T+KKG+E+KE I + +R A++ Y+ ++V +++R +E R
Sbjct: 1 MPRSKRSKLVTLANTEKKGRENKERIFDEVREALDTYRYVWVLHLDDVRTPVLQEIRTGW 60
Query: 61 KPSRLLWVGRYPM----------RYSQ-AYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ R + YS+ +K+++ G TGL T+ V+ F Y
Sbjct: 61 AGSKLILGKRKVLEKALGLNREDEYSENLHKLTRHCGGVTGLLFTDEDVNVVKEYFQSYT 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQ-GMPVRLNKGVV 156
D++R S A +P G P E+ H +EP LR + +P ++ G +
Sbjct: 121 RSDYSRPNSRAPLTFTIPAGIIYSRGGQIPTEEDVPMVHSLEPTLRNKFQIPTKIKAGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
+ S + VCEEG+ L A IL+ GI A FK+ + + E ++ + G++
Sbjct: 181 TIESPYTVCEEGEKLDVRKALILKQFGIADAQFKVKVAAYYDKESSDVKKVGIN 234
>gi|302666782|ref|XP_003024987.1| hypothetical protein TRV_00849 [Trichophyton verrucosum HKI 0517]
gi|291189066|gb|EFE44376.1| hypothetical protein TRV_00849 [Trichophyton verrucosum HKI 0517]
Length = 277
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 114/234 (48%), Gaps = 33/234 (14%)
Query: 1 MPKSKRDRPVTLSKTKKKG-KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP SKR + + S+T+KK KE + +++ AVE Y ++VF+ +NMRN K+ R +
Sbjct: 34 MPISKRAKVIHESRTQKKSHKEQTRRLYANVQAAVEEYDHLFVFAVDNMRNTYLKDVRTE 93
Query: 60 IKPSRLLW---------VGRYPMRYSQAY-----KVSKFLCGNTGLFLTNMPKEEVESLF 105
RL + +G P AY ++S +L G GL T+ + V F
Sbjct: 94 FSDGRLFFGKTKVMAIALGTTP---ETAYAPNLNRLSPYLTGAVGLLFTSRDPQSVLDFF 150
Query: 106 NKYEDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNK 153
+ DFAR G+ +P G + E +H +EP LRK +P RL K
Sbjct: 151 ESFHPIDFARAGNITPRSFTIPSGVVYSRAGEIPAEDDEPISHTIEPTLRKLNVPTRLVK 210
Query: 154 G--VVELVSD-FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
G ++E+ D + VC+ G+ L + +L++ G+ +A FK+ + RW + E+
Sbjct: 211 GKVMLEMEGDGYQVCKAGEELDSRQSTLLKMFGVAVAEFKVEMKARWEKKSGEV 264
>gi|307207599|gb|EFN85263.1| mRNA turnover protein 4-like protein [Harpegnathos saltator]
Length = 143
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 70/112 (62%)
Query: 87 GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQG 146
G GL TN K++V N YE+ ++AR G A +ELPEGPL QF H MEP LR+ G
Sbjct: 3 GQCGLLFTNRSKKQVIEWANGYEELEYARAGFVAPYSIELPEGPLPQFQHSMEPQLRQLG 62
Query: 147 MPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
MP L KG++ L+ + VC+E L+ E +IL+LL +ATFKL L+ ++
Sbjct: 63 MPTALQKGIITLIKPYKVCQESDVLTSEQTQILKLLDKPLATFKLLLLGLYT 114
>gi|119174820|ref|XP_001239738.1| mRNA turnover protein MRT4 [Coccidioides immitis RS]
gi|303314547|ref|XP_003067282.1| mRNA turnover protein MRT4 [Coccidioides posadasii C735 delta
SOWgp]
gi|240106950|gb|EER25137.1| ribosomal protein L10 containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320037588|gb|EFW19525.1| 60S acidic ribosomal protein P0 [Coccidioides posadasii str.
Silveira]
gi|392869930|gb|EAS28471.2| 60S acidic ribosomal protein P0 [Coccidioides immitis RS]
Length = 244
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 27/231 (11%)
Query: 1 MPKSKRDRPVTLSK-TKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP SKR + V SK TKK KE + +++ AV NY ++VFS +NMRN K+ R +
Sbjct: 1 MPVSKRAKIVHESKVTKKSHKEQTRRLYANVQEAVSNYDHLFVFSVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLWVGRYPMRY-------SQAY-----KVSKFLCGNTGLFLTNMPKEEVESLFNK 107
L+ G+ + A+ K+S +L G GL T+ + V F+
Sbjct: 61 FSEDGRLFFGKTKVMAVALGTNPETAFAPNLDKLSPYLNGAVGLLFTSRSPKSVLDYFSS 120
Query: 108 YEDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNKGV 155
+ DFAR G+ + +P G + + +H +EP LRK G+P RL +G
Sbjct: 121 FHPMDFARAGNVSPRAFTIPSGIVYAHAGEIPEEHDQPISHTIEPTLRKLGVPTRLVRGK 180
Query: 156 V--ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
V ++ + VC+ G+ L +L++ G+ +A F++ + W+ E E+
Sbjct: 181 VTLDMEGGYQVCKAGETLDSRQTTLLKMFGVAVAEFRVEMRAHWTKETGEV 231
>gi|366988813|ref|XP_003674174.1| hypothetical protein NCAS_0A12360 [Naumovozyma castellii CBS 4309]
gi|342300037|emb|CCC67794.1| hypothetical protein NCAS_0A12360 [Naumovozyma castellii CBS 4309]
Length = 239
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKG+E+KE I + +R ++ Y+ ++V +N+R +E R
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREGLDTYRYVWVLYLDNVRTPVLQEIRTAW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ + + + +K++ G TGL TN + V++ F Y
Sbjct: 61 TGSKLIMGKKKVLAKALGEKREEEYKENLFKLASLCTGVTGLLFTNEDVDTVKNYFQSYV 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQ-GMPVRLNKGVV 156
DF+R S A +PEG P++ H +EP LR + +P ++ G +
Sbjct: 121 KLDFSRPNSRAPLTFVIPEGIVYSRGGQIPIDDDIPMVHSLEPTLRNKFEIPTKIKAGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
L S + VC+EG+ L A IL+ G+ + FK+ + + E
Sbjct: 181 TLDSPYQVCQEGEKLDVRQALILKQFGVAASEFKVKVAAYYDNE 224
>gi|299743652|ref|XP_001835898.2| hypothetical protein CC1G_02986 [Coprinopsis cinerea okayama7#130]
gi|298405755|gb|EAU85963.2| hypothetical protein CC1G_02986 [Coprinopsis cinerea okayama7#130]
Length = 231
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 20/201 (9%)
Query: 26 IVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQ-------- 77
++N ++ E ++ ++F +MRN K R K S ++ GR +
Sbjct: 1 MMNELQVNAEKWRYCWLFEVGSMRNAHLKTVRNLWKDSARIFFGRGAVMAKALGTTPEEE 60
Query: 78 ----AYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQ 133
+K++K + G GL T+ +EV F ++ DFAR G+ A+ V LP GP+ Q
Sbjct: 61 HKEGIHKLAKQIKGQVGLLFTDTEPQEVIEWFADFKQPDFARAGNIASRTVILPAGPVMQ 120
Query: 134 --------FTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
F H +P LRK G+ +++GV L + +C +GKPL+ E ++L+L+G +
Sbjct: 121 RHSDPPEPFPHNEDPQLRKLGLTTIMDRGVPTLTNPHKICTQGKPLTAEQTQLLKLIGER 180
Query: 186 MATFKLHLICRWSAEDFELYR 206
M F++ L+ RW A E+ +
Sbjct: 181 MVHFRVGLLARWDAATGEVVQ 201
>gi|156843247|ref|XP_001644692.1| hypothetical protein Kpol_1056p35 [Vanderwaltozyma polyspora DSM
70294]
gi|156115340|gb|EDO16834.1| hypothetical protein Kpol_1056p35 [Vanderwaltozyma polyspora DSM
70294]
Length = 238
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTLS+T KKG+E+KE I + +R A++ Y+ +++ +++R +E R
Sbjct: 1 MPRSKRSKLVTLSQTDKKGRENKERIFDEVRAALDTYRYVWILYLDDVRTPVLQEIRSSW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ R + + +K++K G TGL TN + V S F Y
Sbjct: 61 TGSKLILGKRKVLEKALGTTREDEYKENLHKLTKECSGVTGLLFTNEDIDTVRSYFESYA 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLR-KQGMPVRLNKGVV 156
D++R S A +PEG P+E H +EP LR K +P ++ G +
Sbjct: 121 RMDYSRPNSRAPLTFVIPEGIVYSRGGQVPIEDDVPMVHSLEPTLRNKLDIPTKIKAGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
+ S ++VC +G L A IL+ G+ + +K+ + + E
Sbjct: 181 TVESPYLVCNKGDKLDVRQALILKQFGVAASEYKVKVAAYYDNE 224
>gi|363749531|ref|XP_003644983.1| hypothetical protein Ecym_2436 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888616|gb|AET38166.1| Hypothetical protein Ecym_2436 [Eremothecium cymbalariae
DBVPG#7215]
Length = 236
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 114/217 (52%), Gaps = 24/217 (11%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T+KKG+E+KE I + +R+A++ Y+ ++V E++R +E R
Sbjct: 1 MPRSKRSKLVTLAQTEKKGRENKERIFDEVRSALDKYRFVWVLQLEDIRTPVLQEIRGAW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ R + + +++ K+ G TGL T+ + VE F Y
Sbjct: 61 NGSKLILGKRKVLAKALGANRETEYKENIHRLVKYFDGVTGLLFTDEEQVTVEEYFKAYV 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQ-GMPVRLNKGVV 156
D++R S A ++P G P E+ H +EP +R + +P ++ G +
Sbjct: 121 KADYSRAKSKAPLTFKIPAGVVYSRGGQTPEEEDIPMVHSLEPTMRNKFKIPTKIKNGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
L ++++VCE+G+ L A IL+ GI A FK+ +
Sbjct: 181 FLENEYLVCEKGQTLDVRQALILKQFGIAAAEFKVKI 217
>gi|258567042|ref|XP_002584265.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905711|gb|EEP80112.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 244
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 27/227 (11%)
Query: 1 MPKSKRDRPVTLSK-TKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP SKR + V SK TKK KE + +++ AV Y +++FS +NMRN K+ R +
Sbjct: 1 MPVSKRAKVVHESKVTKKSHKEQTRRLYANVQEAVSKYDHLFIFSVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLWVGRYPMRY-------SQAY-----KVSKFLCGNTGLFLTNMPKEEVESLFNK 107
L+ G+ + A+ K++ L G+ GL T E V F+
Sbjct: 61 FSEDGRLFFGKTKVMAVALGTTPETAFAPNLDKLAPLLNGSIGLLFTTRAPESVLGYFSS 120
Query: 108 YEDYDFARTGSTATEKVELPEGPL------------EQFTHEMEPFLRKQGMPVRLNKGV 155
+ DFAR G+ + +P G + E +H +EP LRK G+P RL +G
Sbjct: 121 FHPTDFARAGNVSPRAFTIPPGIVYAHAGEIPAEHDEPLSHTIEPTLRKLGVPTRLVRGK 180
Query: 156 V--ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
V E+ + VC+ G+ L +L++ G+ +A FK+ + W+ E
Sbjct: 181 VTLEMQDGYQVCKAGETLDSRQTSLLKMFGVAVAEFKVEMRAHWNKE 227
>gi|444316480|ref|XP_004178897.1| hypothetical protein TBLA_0B05490 [Tetrapisispora blattae CBS 6284]
gi|387511937|emb|CCH59378.1| hypothetical protein TBLA_0B05490 [Tetrapisispora blattae CBS 6284]
Length = 239
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 112/217 (51%), Gaps = 24/217 (11%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKG+E+KE I + IR A++ +K ++V +++R +E R
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEIREALDTFKYVWVLHLDDVRTPVLQEIRSAW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ R ++ + +++S+ G TGL T+ + V+ F Y
Sbjct: 61 TGSKLILGKRKVLQKALGTRREDEYKDNLFRLSQTCSGVTGLLFTDEEVDTVKDYFKSYS 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQ-GMPVRLNKGVV 156
DF+R S + ELP G P+E H +EP LR + +P ++ KG +
Sbjct: 121 RKDFSRPNSRSPITFELPAGIIYSRGGQIPIEDDLPMVHSLEPTLRNKFEIPTKIVKGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
+ S + VCE+G+ L A IL+ GI + FK+ +
Sbjct: 181 TIDSPYKVCEKGEKLDVRKALILKQFGIAESEFKVKV 217
>gi|255713404|ref|XP_002552984.1| mRNA turnover protein MRT4 [Lachancea thermotolerans CBS 6340]
gi|238934364|emb|CAR22546.1| KLTH0D06050p [Lachancea thermotolerans CBS 6340]
Length = 238
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKG+E+KE I + +R A++ ++ ++V +++R +E R
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDTFRFVWVLHLDDVRTPVLQEIRSAW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ R ++ S + +SK G TGL T+ + V+ F Y
Sbjct: 61 VGSKLIMGKRKVLQKSLGEKREEEYKENIFALSKLCSGVTGLLFTDEEPQVVQEYFKSYV 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQGM-PVRLNKGVV 156
D++R S A E+P G P E H +EP LR + M P ++ G +
Sbjct: 121 RADYSRPKSKAPLTFEIPAGIIYSRGGQIPAEDDVPMVHSLEPTLRNKFMIPTKIKAGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
+ S ++VC EG+ L A IL+ G+ A F++ + + E
Sbjct: 181 TIESPYLVCTEGETLDVRQALILKQFGVAAAEFRVKVAAYYDNE 224
>gi|50423153|ref|XP_460157.1| mRNA turnover protein MRT4 [Debaryomyces hansenii CBS767]
gi|49655825|emb|CAG88430.1| DEHA2E19580p [Debaryomyces hansenii CBS767]
Length = 232
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 116/230 (50%), Gaps = 24/230 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKGKE+K I + +R+A++ ++ +++ +++R ++ R
Sbjct: 1 MPRSKRSKLVTLAQTDKKGKENKTRIFDEVRSALDEFRFVWILQLDDVRTPVLQDIRTDW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ R + + +K+SK G +GL TN + V++ F Y
Sbjct: 61 AGSKLILGKRRVLEKALGDTPEEEYKDNLHKLSKLCTGVSGLLFTNETPDTVQAYFTAYS 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLR-KQGMPVRLNKGVV 156
D++R S A +PEG +E+ +H +E LR K +P ++ G +
Sbjct: 121 KQDYSRAKSKAPIDFTIPEGIVYSRGGQIAIEEDVPMSHSLEETLRNKLKVPTKIKAGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYR 206
L +VVC EG+ L A +L+ GI + FK++ I + E E+ +
Sbjct: 181 ILNEPYVVCTEGETLDVRKALLLKQFGIAASEFKVNTIAYFDNESSEITK 230
>gi|6322843|ref|NP_012916.1| Mrt4p [Saccharomyces cerevisiae S288c]
gi|465665|sp|P33201.1|MRT4_YEAST RecName: Full=mRNA turnover protein 4
gi|263500|gb|AAB24904.1| ribosomal protein L10 homolog [Saccharomyces cerevisiae]
gi|485985|emb|CAA81844.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151941536|gb|EDN59899.1| protein involved in mRNA turnover and ribosome assembly
[Saccharomyces cerevisiae YJM789]
gi|190409813|gb|EDV13078.1| mRNA turnover protein 4 [Saccharomyces cerevisiae RM11-1a]
gi|207343441|gb|EDZ70898.1| YKL009Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271557|gb|EEU06600.1| Mrt4p [Saccharomyces cerevisiae JAY291]
gi|259147823|emb|CAY81073.1| Mrt4p [Saccharomyces cerevisiae EC1118]
gi|285813250|tpg|DAA09147.1| TPA: Mrt4p [Saccharomyces cerevisiae S288c]
gi|323304120|gb|EGA57898.1| Mrt4p [Saccharomyces cerevisiae FostersB]
gi|323308203|gb|EGA61452.1| Mrt4p [Saccharomyces cerevisiae FostersO]
gi|323332813|gb|EGA74218.1| Mrt4p [Saccharomyces cerevisiae AWRI796]
gi|323354125|gb|EGA85971.1| Mrt4p [Saccharomyces cerevisiae VL3]
gi|365764649|gb|EHN06171.1| Mrt4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392298130|gb|EIW09228.1| Mrt4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 236
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 110/217 (50%), Gaps = 24/217 (11%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKG+E+KE I + +R A++ Y+ ++V +++R +E R
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDTYRYVWVLHLDDVRTPVLQEIRTSW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ R ++ + Y++SK G TGL T+ V+ F Y
Sbjct: 61 AGSKLIMGKRKVLQKALGEKREEEYKENLYQLSKLCSGVTGLLFTDEDVNTVKEYFKSYV 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQ-GMPVRLNKGVV 156
D++R + A +PEG P E+ H +EP +R + +P ++ G +
Sbjct: 121 RSDYSRPNTKAPLTFTIPEGIVYSRGGQIPAEEDVPMIHSLEPTMRNKFEIPTKIKAGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
+ S ++VC EG+ L A IL+ GI + FK+ +
Sbjct: 181 TIDSPYLVCTEGEKLDVRQALILKQFGIAASEFKVKV 217
>gi|349579553|dbj|GAA24715.1| K7_Mrt4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 236
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 110/217 (50%), Gaps = 24/217 (11%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKG+E+KE I + +R A++ Y+ ++V +++R +E R
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDTYRYVWVLHLDDVRTPVLQEIRTSW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ R ++ + Y++SK G TGL T+ V+ F Y
Sbjct: 61 AGSKLIMGKRKVLQKALGEKREEEYKENLYQLSKLCSGVTGLLFTDEDVNTVKEYFKSYV 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQ-GMPVRLNKGVV 156
D++R + A +PEG P E+ H +EP +R + +P ++ G +
Sbjct: 121 RSDYSRPNTKAPLTFTIPEGIVYSRGGQIPAEEDVPMIHSLEPTMRNKFEIPTKIKAGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
+ S ++VC EG+ L A IL+ GI + FK+ +
Sbjct: 181 TIDSPYLVCTEGEKLDVRQALILKQFGIAASEFKVKV 217
>gi|255733086|ref|XP_002551466.1| mRNA turnover protein 4 [Candida tropicalis MYA-3404]
gi|240131207|gb|EER30768.1| mRNA turnover protein 4 [Candida tropicalis MYA-3404]
Length = 229
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 115/218 (52%), Gaps = 24/218 (11%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKGKE+K + + +R+A++ YK ++V F+++R ++ R
Sbjct: 1 MPRSKRSKLVTLAQTDKKGKENKTRLFDDVRSALDTYKYVWVLQFDDIRTPVLQDIRNDW 60
Query: 61 KPSRLLWVGRYPMRYS------QAYK-----VSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ R ++ + + YK ++K L G GL TN E V++ F Y
Sbjct: 61 NESKLILGKRKVLQKALGESIEEEYKDNLNQLTKILEGLPGLLFTNEDPETVDAYFKAYS 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLR-KQGMPVRLNKGVV 156
D++R S A +P+G P+E+ +H +E LR K +P ++ G +
Sbjct: 121 KQDYSRAKSKAPIDFIIPQGIVYSRGGQIPIEEDVPMSHSLEETLRNKLRVPTKIKAGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
L +VVC EG+ L A +L+ G+ + FK+ ++
Sbjct: 181 VLDEPYVVCNEGEVLDVRQAMLLKQFGVAASEFKVPVL 218
>gi|302410871|ref|XP_003003269.1| mRNA turnover protein MRT4 [Verticillium albo-atrum VaMs.102]
gi|261358293|gb|EEY20721.1| mRNA turnover protein [Verticillium albo-atrum VaMs.102]
Length = 237
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 93/204 (45%), Gaps = 32/204 (15%)
Query: 33 AVENYKSIYVFSFENMRNLKFKEFREQIKPSRL-----------LWVGRYPMRYSQAYKV 81
AV Y+ +VFS +NMRN K+ R ++ RL L R ++
Sbjct: 23 AVPQYQHCFVFSVDNMRNNHLKDVRHELSDCRLFFGKTKLMSKALGQTRETALLDGTDRL 82
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG---------PLE 132
+ L G GL LTN + + F DFAR G+TA + +P+G P E
Sbjct: 83 TPHLSGTVGLLLTNRDPSAITTYFEGLSPVDFARAGTTAPREFAIPQGVLFATGGEVPRE 142
Query: 133 Q---FTHEMEPFLRKQGMPVRLNKGVVEL---------VSDFVVCEEGKPLSPESARILR 180
H +EP LR+ GMP R+ +G + L +VVC+EG L R+L+
Sbjct: 143 HDVPMEHSIEPELRRLGMPTRMVRGRIVLGEEEPTEDAAPGYVVCKEGDVLDSRQTRLLK 202
Query: 181 LLGIKMATFKLHLICRWSAEDFEL 204
L GI M+ F++ LI WSA E+
Sbjct: 203 LFGICMSEFRVELIAYWSAATGEV 226
>gi|448081620|ref|XP_004194933.1| Piso0_005460 [Millerozyma farinosa CBS 7064]
gi|359376355|emb|CCE86937.1| Piso0_005460 [Millerozyma farinosa CBS 7064]
Length = 232
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 114/227 (50%), Gaps = 24/227 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T+KK + +K I + +R+A++ ++ ++V +++R +E R
Sbjct: 1 MPRSKRSKLVTLAQTEKKDRSNKVRIFDDVRSALDTHRYVWVLKLDDVRTPVLQEIRNDW 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ +G P K+S L G +GL T+ E V++ FN Y
Sbjct: 61 TGSKLILGKRKVLVKALGDSPEEEYKDNLSKISSTLSGMSGLLFTDETPETVQAYFNAYT 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLR-KQGMPVRLNKGVV 156
DF+R S+A +P G P+E+ +H +E LR K MP ++ G +
Sbjct: 121 RQDFSRAKSSAPIDFTIPSGVVYSRGGQIPVEEDVPMSHSLEETLRNKYSMPTKMKAGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFE 203
L +VVC++G L A IL+ G+ + FK+ +I + + E
Sbjct: 181 VLDEPYVVCKKGDTLDVRQALILKQFGVAASEFKVPIIAYFDGKTSE 227
>gi|448538124|ref|XP_003871458.1| Mrt4 mRNA turnover protein [Candida orthopsilosis Co 90-125]
gi|380355815|emb|CCG25334.1| Mrt4 mRNA turnover protein [Candida orthopsilosis]
Length = 240
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 115/239 (48%), Gaps = 33/239 (13%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + VTLS+T KKGKE K + + IR+A++NY +++ +++R ++ R
Sbjct: 1 MPKSKRSKLVTLSQTDKKGKESKLKLFDEIRSALDNYSQVWILQMKDIRTPVLQDIRSDW 60
Query: 61 KPSRLLWVGRYPMR-----------YSQAYKVSKFLCGNT----GLFLTNMPKEEVESLF 105
S+L+ R ++ S K++K L G+ TN V+S F
Sbjct: 61 TDSKLILGKRKVIQKAFGETPEEEYLSDLAKLTKILSTTDDLIPGILFTNEDDSTVQSYF 120
Query: 106 NKYEDYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLR-KQGMPVRLN 152
+ Y+ D+ R + + E+P G P E+ +H +E LR K MP ++
Sbjct: 121 DAYKRQDYTRVKNKSPITFEIPAGIVYSRGGQIPEEEDVPMSHSLEETLRNKYKMPTKIK 180
Query: 153 KGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS-----AEDFELYR 206
G + L ++VC EG L A IL+ G+ + FK+ L+ + E F++Y+
Sbjct: 181 SGKIVLEKPYLVCNEGDVLDVRQALILKQFGVAASEFKVPLVGHYDKESAKVEKFDIYK 239
>gi|354542924|emb|CCE39642.1| hypothetical protein CPAR2_600560 [Candida parapsilosis]
Length = 237
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 111/228 (48%), Gaps = 28/228 (12%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + VTLS+T KKGKE K + + IR+A++NY +++ +++R ++ R
Sbjct: 1 MPKSKRSKLVTLSQTDKKGKESKLKLFDEIRSALDNYSHVWILQMKDIRTPVLQDIRSDW 60
Query: 61 KPSRLLWVGRYPMR-----------YSQAYKVSKFLCGN----TGLFLTNMPKEEVESLF 105
S+L+ R ++ S+ K++K L G+ TN V+S F
Sbjct: 61 TDSKLILGKRKVIQKAFGETPEEEYLSELAKLAKILSTTEDLIPGILFTNEDNATVQSYF 120
Query: 106 NKYEDYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLR-KQGMPVRLN 152
+ Y+ D+ R S + E+P G P E+ +H +E LR K MP ++
Sbjct: 121 DAYKRQDYTRVKSKSPITFEIPAGIVYSRGGQIPEEEDVPMSHSLEETLRNKYKMPTKIK 180
Query: 153 KGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
G + L ++VC EG L A IL+ G+ + FK+ L+ + E
Sbjct: 181 SGKIVLEKPYLVCNEGDILDVRQALILKQFGVAASEFKVPLVGHYDKE 228
>gi|84998062|ref|XP_953752.1| 60S ribosomal protein L10e [Theileria annulata]
gi|65304749|emb|CAI73074.1| 60S ribosomal protein L10e, putative [Theileria annulata]
Length = 225
Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 112/218 (51%), Gaps = 21/218 (9%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKS-------IYVFSFENMRNLKF 53
M SKR P+ S KK GK+ +++ N IR +EN+ +Y+ S N RN
Sbjct: 1 MAISKRRNPLHTSICKKDGKKKIKLVEN-IRETLENFIKKNDNSTFVYLISLNNQRNSPL 59
Query: 54 KEFREQIKPSRLLWVGRYPMR-----------YSQAYKVSKFLCGNTGLFLTNMPKEEVE 102
K R + P R+ + MR + +K+SK + G T + +T+ E V
Sbjct: 60 KTLRSLLLPGRVFYGKNKVMRIAFGTKPEDEIHDNIHKISKNINGETAVLITSEDPEVVI 119
Query: 103 SLFNKYEDYDFARTGSTATEKVELP-EGP-LEQFTHEMEPFLRKQGMPVRLNKGVVELVS 160
+Y+ DF++ G+ AT+ + L +G ++ MEP R+ GMP LN G + L+
Sbjct: 120 KKVKEYKVRDFSKAGNIATDTIVLKVDGKEFDEIPGSMEPQFRQLGMPTALNMGKIILMG 179
Query: 161 DFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
DF +CE+ KPL+P +L+L GI+M+ F+ +++ W+
Sbjct: 180 DFTLCEKDKPLTPNQTHLLKLFGIRMSLFEANVLGFWN 217
>gi|297728767|ref|NP_001176747.1| Os12g0105325 [Oryza sativa Japonica Group]
gi|255669961|dbj|BAH95475.1| Os12g0105325 [Oryza sativa Japonica Group]
Length = 77
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 58/66 (87%)
Query: 151 LNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLD 210
++ G VELV+D +VCEEGKP+SPE+A+ LRLLG++MATF+L+L+CRWS++DFE+Y+EGL
Sbjct: 8 VDAGAVELVADHIVCEEGKPISPEAAQTLRLLGMQMATFRLYLVCRWSSDDFEVYKEGLA 67
Query: 211 ESDVES 216
+ E+
Sbjct: 68 QLRAEA 73
>gi|145524313|ref|XP_001447984.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415517|emb|CAK80587.1| unnamed protein product [Paramecium tetraurelia]
Length = 220
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 115/209 (55%), Gaps = 14/209 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP +KR R L+KTKKK E KE++V ++ +++ Y+ +F ++N+ KE ++
Sbjct: 1 MPITKRKRTQVLTKTKKKTPEKKELLVKKLKQSLKKYQRAIIFQYKNLSTNPLKEIQQAW 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K L++G+ + +Y +S FL G TGL LTN +E++ + Y
Sbjct: 61 KSDSKLFIGKNKVMQVGLGKGEEQSATKNSYLLSPFLKGETGLLLTNKTLQEIQEYCDTY 120
Query: 109 EDYDFARTGSTATEKVELPEG--PLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
+ +FAR G + + + L EG L+ F H +EP+LRK G+ +L + L F++ +
Sbjct: 121 KIPEFARAGHISDQTIVLKEGIDTLKGFAHSIEPYLRKLGLNTQLINQQIVLNEKFILAQ 180
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLIC 195
EGKPL+ E +ILRL+ K+A ++ +C
Sbjct: 181 EGKPLTVEQTKILRLMNQKLAYLEIAPLC 209
>gi|401624872|gb|EJS42911.1| mrt4p [Saccharomyces arboricola H-6]
Length = 236
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 24/225 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKG+E+KE I + +R A++ Y+ ++V +++R +E R
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDTYRYVWVLHLDDVRTPVLQEIRTSW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ R ++ + +++SK G TGL TN V+ F Y
Sbjct: 61 AGSKLIMGKRKVLQKALGEKREEEYKENLFQLSKLCSGVTGLLFTNEDVNTVKEYFESYA 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQ-GMPVRLNKGVV 156
D++R + A +PEG P E H +EP +R + +P ++ G +
Sbjct: 121 RSDYSRPNTKAPLTFTIPEGIIYSRGGQIPAEDDVPMIHSLEPTMRNKFEIPTKIKAGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAED 201
+ S ++VC + L A IL+ G+ + FK+ + + ++
Sbjct: 181 TIDSPYLVCTMDEKLDVRQALILKQFGVAASEFKVKVSAYYDNDN 225
>gi|146416159|ref|XP_001484049.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 234
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 24/230 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKGKE+K I + +R+A++ ++ ++V R ++ R
Sbjct: 1 MPRSKRSKLVTLAQTDKKGKENKIRIFDEVRSALDEFRFVWVIRLMMFRISVLQDIRSDW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+LL R + + +K+SK G +GL T+ E V + F+ Y
Sbjct: 61 TGSQLLMGKRKVLEKALGEKPEDEYKDNLHKLSKSCTGVSGLLFTDETPETVTAYFSAYS 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLR-KQGMPVRLNKGVV 156
D++R + A +PEG P+E+ +H +E LR K +P R+ G +
Sbjct: 121 KQDYSRAKTKAPIDFVIPEGIVYSRGGQIPIEEDVPMSHSVEETLRNKLKVPTRIKSGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYR 206
L +VVC +G L A +L+ G+ + FK L+ + ED ++ +
Sbjct: 181 TLSEPYVVCRKGDTLDVRQALLLKQFGVAASEFKPELVAYFDNEDNQVTK 230
>gi|365759671|gb|EHN01448.1| Mrt4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 236
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 24/217 (11%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKG+E+KE I + +R A++ Y+ ++V +++R ++ R
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDTYRYVWVLHLDDVRTPVLQDIRTSW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ R ++ + +++SK G TGL T+ V+ F Y
Sbjct: 61 AGSKLIMGKRKVLQKALGEKREEEYKENLFQLSKLCSGVTGLLFTDEDVNTVKEYFQTYV 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQ------------FTHEMEPFLRKQ-GMPVRLNKGVV 156
D++R + A +PEG + H +EP +R + +P + G +
Sbjct: 121 RSDYSRPNTKAPLTFTIPEGIVYSRGGQISVEEDVPMIHSLEPTMRNKFEIPTSIKAGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
+ S ++VC EG+ L A IL+ G+ + FK+ +
Sbjct: 181 TIDSPYLVCTEGEKLDVRQALILKQFGVAASEFKVKV 217
>gi|68473344|ref|XP_719230.1| potential rRNA processing factor [Candida albicans SC5314]
gi|68473577|ref|XP_719113.1| potential rRNA processing factor [Candida albicans SC5314]
gi|46440916|gb|EAL00217.1| potential rRNA processing factor [Candida albicans SC5314]
gi|46441039|gb|EAL00339.1| potential rRNA processing factor [Candida albicans SC5314]
gi|238883069|gb|EEQ46707.1| mRNA turnover protein 4 [Candida albicans WO-1]
Length = 230
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 113/224 (50%), Gaps = 24/224 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T+KKGKE+K + + +R+A++ +K I+V F+++R ++ R
Sbjct: 1 MPRSKRSKLVTLAQTEKKGKENKTRLFDEVRSALDTFKYIWVLQFDDIRTPVLQDVRNDW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ R ++ + +++SK G GL T+ E VE+ F Y
Sbjct: 61 VGSKLILGKRKVLQKALGETIEEEYKDNLHQLSKLCEGLPGLLFTDESPETVEAYFKAYS 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLR-KQGMPVRLNKGVV 156
D++R S A +P G +E+ +H +E LR K +P ++ G +
Sbjct: 121 KQDYSRAKSRAPIDFTIPAGIVYSRGGQISIEEDVPMSHSLEETLRNKLKVPTKIKAGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
L +VVC +G L A +L+ G+ + FK+ ++ + E
Sbjct: 181 ILEEPYVVCNKGDVLDTRQALLLKQFGVAASEFKIPILGYYDGE 224
>gi|403221382|dbj|BAM39515.1| 60S ribosomal protein L10e [Theileria orientalis strain Shintoku]
Length = 232
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 103/219 (47%), Gaps = 22/219 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKS--------IYVFSFENMRNLK 52
MP SKR L+ KK K+ +I N IR +E + +Y+ + + RN
Sbjct: 1 MPSSKRKLKTQLTSCKKDSKKKLNLIEN-IRGTLEQFIKNNKNESTFVYIIALNDQRNSP 59
Query: 53 FKEFREQIKPSRLLWVGRYPMR-----------YSQAYKVSKFLCGNTGLFLTNMPKEEV 101
K R + P R+ + MR + +K+S+ L G + + +T+ + V
Sbjct: 60 LKTLRSILLPGRVFYGKNKVMRIALGTKPEDEIFENLHKISENLFGESAILITSEMPDVV 119
Query: 102 ESLFNKYEDYDFARTGSTATEKVELPEG--PLEQFTHEMEPFLRKQGMPVRLNKGVVELV 159
N ++ DF + A E + L EG + MEP RK G+P LN G + L+
Sbjct: 120 MEKVNGFKVRDFIKCDKLAKETIVLKEGGDDFKDIPGSMEPQFRKLGVPTALNMGKIVLM 179
Query: 160 SDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
DFVVCE+ K LS ++IL+LLGI+M+ F + W+
Sbjct: 180 GDFVVCEKNKRLSANQSQILKLLGIRMSLFSATVKGFWN 218
>gi|67471343|ref|XP_651623.1| 60S acidic ribosomal protein PO [Entamoeba histolytica HM-1:IMSS]
gi|167381456|ref|XP_001735725.1| mRNA turnover protein 4 mrt4 [Entamoeba dispar SAW760]
gi|56468387|gb|EAL46236.1| 60S acidic ribosomal protein PO, putative [Entamoeba histolytica
HM-1:IMSS]
gi|165902154|gb|EDR28043.1| mRNA turnover protein 4 mrt4, putative [Entamoeba dispar SAW760]
gi|449707104|gb|EMD46821.1| 60S acidic ribosomal protein PO [Entamoeba histolytica KU27]
Length = 226
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 109/205 (53%), Gaps = 13/205 (6%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMR----NLKFKEFREQI---KPSRLLWVGRYP 72
KE K ++ +I+ A + Y ++++F +R N+ K++R+ I ++++ V
Sbjct: 13 KEIKNRLITNIQEAAQKYSTVFIFYTPVLRSKFMNIIRKDWRDSIFFFGSNKVMQVALGR 72
Query: 73 MRYSQA----YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE 128
+ + +++ L G GL TN KEE+ + F DFAR+GS AT +PE
Sbjct: 73 TEQDEIKPGYHFIAERLKGTCGLCFTNKKKEEILAYFKTQIHDDFARSGSIATMDFVVPE 132
Query: 129 GPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMAT 188
GPL F +E LRK +PV L G++ ++VVC +G+ LSP++AR+L IKMA
Sbjct: 133 GPLP-FEGSLELHLRKNLLPVELKDGILSCKEEYVVCRKGQKLSPQAARLLEYFDIKMAV 191
Query: 189 FKLHLICRWSAEDF-ELYREGLDES 212
F++ ++ F EL G DE+
Sbjct: 192 FEIRVLSIIQDGKFEELESIGEDET 216
>gi|145515976|ref|XP_001443882.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411282|emb|CAK76485.1| unnamed protein product [Paramecium tetraurelia]
Length = 220
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 115/209 (55%), Gaps = 14/209 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP +KR R L+KTKKK E KE++V ++ +++ Y+ VF ++N+ KE ++
Sbjct: 1 MPITKRKRNQVLTKTKKKTPEKKELLVKKLKQSLKKYQRAIVFQYKNLSTNPLKEIQQAW 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
K L++G+ + +Y +S FL G TGL LTN +E++ + Y
Sbjct: 61 KADSKLFIGKNKVMQVGLGRNEEQSATKNSYLLSPFLKGETGLLLTNKTLQEIQEYCDTY 120
Query: 109 EDYDFARTGSTATEKVELPEG--PLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
+ +FAR G + + + L EG L+ F H +EP+LRK G+ +L + L F++ +
Sbjct: 121 KIPEFARAGHISDQTIVLKEGIDTLKGFAHSIEPYLRKLGLNTQLINQQIVLNEKFILTQ 180
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLIC 195
EGKPL+ E ++LRL+ K+A ++ +C
Sbjct: 181 EGKPLTVEQTKLLRLMDKKLAYLEIAPLC 209
>gi|190347117|gb|EDK39332.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 234
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 24/230 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKGKE+K I + +R+A++ ++ ++V R ++ R
Sbjct: 1 MPRSKRSKLVTLAQTDKKGKENKIRIFDEVRSALDEFRFVWVIRSMMFRISVLQDIRSDW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+LL R + + +K+SK G +GL T+ E V + F+ Y
Sbjct: 61 TGSQLLMGKRKVLEKALGEKPEDEYKDNLHKLSKSCTGVSGLLFTDETPETVTAYFSAYS 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLR-KQGMPVRLNKGVV 156
D++R + A +PEG P+E+ +H +E LR K +P R+ G +
Sbjct: 121 KQDYSRAKTKAPIDFVIPEGIVYSRGGQIPIEEDVPMSHSVEETLRNKLKVPTRIKSGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYR 206
L +VVC +G L A +L+ G+ + FK L+ + ED ++ +
Sbjct: 181 TLSEPYVVCRKGDTLDVRQALLLKQFGVAASEFKPELVAYFDNEDNQVTK 230
>gi|67464035|ref|XP_648494.1| 60S acidic ribosomal protein PO [Entamoeba histolytica HM-1:IMSS]
gi|56464665|gb|EAL43111.1| 60S acidic ribosomal protein PO, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 225
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 110/205 (53%), Gaps = 13/205 (6%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMR----NLKFKEFREQI---KPSRLLWVGRYP 72
KE K ++ +I+ A + Y ++++F +R N+ K++R+ I ++++ V
Sbjct: 13 KEIKNRLITNIQEAAQKYSTVFIFYTPVLRSKFMNIIRKDWRDSIFFFGSNKVMQVALGR 72
Query: 73 MRYSQA----YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE 128
+ + +++ L G GL TN KEE+ + F DFAR+GS AT +PE
Sbjct: 73 TEQDEIKPGYHFIAERLKGTCGLCFTNKKKEEILAYFKTQIHDDFARSGSVATMDFVVPE 132
Query: 129 GPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMAT 188
GPL F +E LRK +PV L G++ ++VVC++G+ L+P++AR+L IKMA
Sbjct: 133 GPLP-FEGSLELHLRKNLLPVELKDGILSCKEEYVVCKKGQKLTPQAARLLEYFDIKMAV 191
Query: 189 FKLHLICRWSAEDF-ELYREGLDES 212
F++ ++ F EL G DE+
Sbjct: 192 FEIRVLSIVQDGKFEELESIGEDET 216
>gi|116207862|ref|XP_001229740.1| mRNA turnover protein MRT4 [Chaetomium globosum CBS 148.51]
gi|88183821|gb|EAQ91289.1| hypothetical protein CHGG_03224 [Chaetomium globosum CBS 148.51]
Length = 246
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 102/225 (45%), Gaps = 42/225 (18%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR + L++ KK +E K+ + F N+R++ F + +
Sbjct: 1 MPKSKRSKVFHLTQVTKKTREQKDKL------------------FSNIRDIFFGKTKLT- 41
Query: 61 KPSRLLWVGRYPMRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTA 120
+R L + +++++L G+ GL TN ++S F DFAR G+ A
Sbjct: 42 --ARALGTTPEDAQADGIDQLTRYLAGSVGLLFTNRAPAAIQSYFASLTHVDFARAGTVA 99
Query: 121 TEKVELPEG---------PLEQ---FTHEMEPFLRKQGMPVRLNKGVVELVSD------- 161
+ V +P G P E H +EP LR+ GMP R+ KG V L D
Sbjct: 100 SRTVTVPPGLVYSTGGEVPAEHDVPVAHTLEPELRRLGMPTRMVKGKVCLGGDESGEGSA 159
Query: 162 --FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
+ +C EG+ L R+L+L + M+ F++ L+ WSA E+
Sbjct: 160 EGYTICREGEVLDSRQTRLLKLFSVCMSEFRVGLLAYWSAASGEV 204
>gi|449702583|gb|EMD43196.1| 60S acidic ribosomal protein PO [Entamoeba histolytica KU27]
Length = 278
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 13/205 (6%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQA- 78
KE K ++ +I+ A + Y ++++F +R+ R+ + S + M+ +
Sbjct: 13 KEIKNRLITNIQEAAQKYSTVFIFYTPVLRSKFMNIIRKDWRDSIFFFGSNKVMQVALGR 72
Query: 79 ----------YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE 128
+ +++ L G GL TN KEE+ + F DFAR+GS AT +PE
Sbjct: 73 TEQDEIKPGYHFIAERLKGTCGLCFTNKKKEEILAYFKTQIHDDFARSGSVATMDFVVPE 132
Query: 129 GPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMAT 188
GPL F +E LRK +PV L G++ ++VVC++G+ L+P++AR+L IKMA
Sbjct: 133 GPLP-FEGSLELHLRKNLLPVELKDGILSCKEEYVVCKKGQKLTPQAARLLEYFDIKMAV 191
Query: 189 FKLHLICRWSAEDF-ELYREGLDES 212
F++ ++ F EL G DE+
Sbjct: 192 FEIRVLSIVQDGKFEELESIGEDET 216
>gi|241956692|ref|XP_002421066.1| mRNA turnover protein MRT4 [Candida dubliniensis CD36]
gi|223644409|emb|CAX41223.1| mRNA turnover protein, putative [Candida dubliniensis CD36]
Length = 235
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 110/218 (50%), Gaps = 24/218 (11%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T+KKGKE+K + + +R A++ YK I+V F+++R ++ R
Sbjct: 1 MPRSKRSKLVTLAQTEKKGKENKTRLFDEVRTALDTYKYIWVLQFDDIRTPVLQDVRNDW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ R ++ + +++SK G GL T+ E V++ F Y
Sbjct: 61 VGSKLILGKRKVLQKALGETVEEEYKDNLHQLSKLCEGLPGLLFTDELPETVDAYFKAYS 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLR-KQGMPVRLNKGVV 156
D++R S A +P G +E+ +H +E LR K +P ++ G +
Sbjct: 121 KQDYSRAKSRAPIDFTIPAGIVYSRGGQISIEEDVPMSHSLEETLRNKLKVPTKIKAGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
L +VVC +G L A +L+ G+ + FK+ ++
Sbjct: 181 VLEEPYVVCNKGDVLDTRQAMLLKQFGVAASEFKIPIL 218
>gi|254565821|ref|XP_002490021.1| mRNA turnover protein MRT4 [Komagataella pastoris GS115]
gi|238029817|emb|CAY67740.1| Protein involved in mRNA turnover and ribosome assembly, localizes
to the nucleolus [Komagataella pastoris GS115]
gi|328350427|emb|CCA36827.1| mRNA turnover protein 4 homolog [Komagataella pastoris CBS 7435]
Length = 236
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 24/224 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKG+++K+ I + +R A++ YK ++V +++R ++ R
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRDNKDRIFDEVRTALDTYKYVWVLRLDDVRTPVLQDVRSDW 60
Query: 61 KPSRLLWVGRYPMR----------YSQ-AYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+LL R ++ Y Q +++ G GL TN V + F Y+
Sbjct: 61 VGSKLLMGKRKVIQKALGETPEEEYKQNLHEIVDVFEGLIGLLFTNEDVNTVSTYFESYK 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQ------------FTHEMEPFLR-KQGMPVRLNKGVV 156
DF R ++ +P G + H +EP R K +P R+ G V
Sbjct: 121 KNDFCRAKEKSSISFTIPAGIIYSTGGQVSESEDVPLPHNLEPTFRNKYKIPTRIKAGKV 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
+ + VCE+G L+ A IL+ GI + FK+ ++ + +E
Sbjct: 181 VIDEPYKVCEKGDILNVTQALILKQFGIASSEFKIQMLAYYDSE 224
>gi|326473435|gb|EGD97444.1| 60S acidic ribosomal protein P0 [Trichophyton tonsurans CBS 112818]
Length = 215
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 109/222 (49%), Gaps = 38/222 (17%)
Query: 1 MPKSKRDRPVTLSKTKKKG-KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MP SKR + + S+T+KK KE + +++ AVE Y ++VF+ +NMRN K+ R +
Sbjct: 1 MPISKRAKVIHESRTQKKSHKEQTRRLYANVQAAVEEYDHLFVFAVDNMRNTYLKDVRTE 60
Query: 60 IKPSRLLW---------VGRYPMRYSQAY-----KVSKFLCGNTGLFLTNMPKEEVESLF 105
SRL + +G P AY ++S +L G GL T+ V
Sbjct: 61 FSDSRLFFGKTKVMAIALGTTP---ETAYAPNLNRLSPYLTGAVGLLFTSRDPHGVV--- 114
Query: 106 NKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKG--VVELVSD-F 162
++R G E+P E +H +EP LRK +P RL KG ++E+ D +
Sbjct: 115 -------YSRAG-------EIPAEDDEPLSHTIEPTLRKLNVPTRLVKGKVMLEMEGDGY 160
Query: 163 VVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
VC+ G+ L + +L++ G+ +A FK+ + RW E E+
Sbjct: 161 QVCKAGEELDSRQSTLLKMFGVAVAEFKVEMKARWEKESGEV 202
>gi|149236563|ref|XP_001524159.1| mRNA turnover protein 4 [Lodderomyces elongisporus NRRL YB-4239]
gi|146452535|gb|EDK46791.1| mRNA turnover protein 4 [Lodderomyces elongisporus NRRL YB-4239]
Length = 237
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR R VTLS+T KKGKE K + + IR+A++ + +++ F ++R ++ R
Sbjct: 1 MPKSKRSRLVTLSQTDKKGKESKTKLFDDIRSALDTFNYLWILEFNHIRTPVLQDIRSDW 60
Query: 61 KPSRLLWVGRYPM-----------RYSQ-AYKVSKFLCGNT----GLFLTNMPKEEVESL 104
L G+ + Y + + V+K L + GL TN + V
Sbjct: 61 GSESKLICGKRKVIQKALGETPEEEYQENLHHVTKILSKSGGLTPGLLFTNETPQTVRDY 120
Query: 105 FNKYEDYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLR-KQGMPVRL 151
F Y D++R + A K +P+G P E+ +H ME LR K +P ++
Sbjct: 121 FEAYNRKDYSRVKTKAPIKFVIPQGVVYSRGGQIPEEEDVVMSHSMEETLRNKYKIPTKI 180
Query: 152 NKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLIC 195
G + L ++VCEEG L A IL+ G+ ++ FK+ LI
Sbjct: 181 KSGKIWLEEPYLVCEEGDVLDVRQALILKQFGVALSEFKVPLIA 224
>gi|402590649|gb|EJW84579.1| ribosomal protein L10 [Wuchereria bancrofti]
Length = 340
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+S L G GL TN + V+ FN+ DFAR G TA VEL EGPL QF +E
Sbjct: 19 KISGLLKGECGLMFTNEDHDSVKKYFNEMYMSDFARCGQTAISTVELCEGPLTQFPFSLE 78
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPE--SARILR 180
P LRK G+P +L KGVV L+S +V+C++G L+ + S+R +R
Sbjct: 79 PQLRKLGLPTKLEKGVVTLISHYVICKDGDKLTADQCSSRNIR 121
>gi|71033805|ref|XP_766544.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353501|gb|EAN34261.1| hypothetical protein, conserved [Theileria parva]
Length = 225
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 89/177 (50%), Gaps = 13/177 (7%)
Query: 35 ENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMR-----------YSQAYKVSK 83
+N +Y+ + N RN K R + P R+ + MR + +K+S
Sbjct: 41 DNSTFVYLIALNNQRNSPLKTLRSILLPGRVFYGKNKVMRIAFGTKPEDEIHDNIHKISN 100
Query: 84 FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVEL--PEGPLEQFTHEMEPF 141
+ G T + +T+ E V + Y+ DF++ G+ AT+ + L ++ MEP
Sbjct: 101 NINGETAVLITSENPEVVVNKVKGYKVRDFSKAGNIATDTIVLKVDGNEFDEIPGSMEPQ 160
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
R+ G+P LN G + L+ D+ +CE+ KPL+P +L+L GI+M+ F+ +++ W+
Sbjct: 161 FRQLGLPTALNMGKIILMGDYTLCEKDKPLTPNQTHLLKLFGIRMSLFEANVVGFWN 217
>gi|313243021|emb|CBY39734.1| unnamed protein product [Oikopleura dioica]
Length = 212
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 74/127 (58%), Gaps = 1/127 (0%)
Query: 79 YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEM 138
+K S+ L G TGL TN +EEV FNKY +AR G + V++ GPL QF+ +
Sbjct: 26 HKFSQSLAGETGLLFTNKKEEEVVEYFNKYNSASYARVGEKSEVTVKVVAGPLPQFSFAI 85
Query: 139 EPFLRKQ-GMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
E LR++ +P L GVV L+ DF + ++G+ ++ + +R+L+L G + TF + L W
Sbjct: 86 EGHLRERLKLPTALKDGVVTLMQDFFLAKDGEAITAQQSRLLKLFGCAITTFNVKLTKMW 145
Query: 198 SAEDFEL 204
+ E E+
Sbjct: 146 NKESGEV 152
>gi|385301386|gb|EIF45578.1| mrna turnover protein 4 [Dekkera bruxellensis AWRI1499]
Length = 250
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 111/225 (49%), Gaps = 25/225 (11%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL+KT+KKG+ +K I + +R A++ ++ ++ E +R ++ R
Sbjct: 1 MPRSKRSKLVTLAKTEKKGRANKVRIFDDVRKALDTHRYVWALDLEGLRTPDMQDLRRDW 60
Query: 61 KPSRLLWVGRYPMRYS------QAYK-----VSKFLC-GNTGLFLTNMPKEEVESLFNKY 108
S+L+ + +R + + YK ++ + G G T+ E VE+ F Y
Sbjct: 61 TGSKLILGKKKVLRKALGETPEEEYKDNLNELTDYDSDGFVGYLFTDETPETVEAYFRAY 120
Query: 109 EDYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQ-GMPVRLNKGV 155
F+R S + +PEG P+E+ H MEP LR + MP ++ KG
Sbjct: 121 VKTGFSRAKSKSPITFVVPEGILYSRAGQIPVEEDVPMQHTMEPMLRNKFEMPTKIVKGK 180
Query: 156 VELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
+ L + V +EG+ LS + A IL+ G+ A F++ ++ E
Sbjct: 181 ITLTESYPVVKEGEVLSVKQALILKTFGVAAAEFRVKMLAYHDGE 225
>gi|320580635|gb|EFW94857.1| rRNA processing factor, putative [Ogataea parapolymorpha DL-1]
Length = 232
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 110/228 (48%), Gaps = 24/228 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKG+E+K I + +R A++ ++ ++V +++R ++ R+
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKTRIFDEVRAALDAHRYVWVLKLDDVRTPVLQDIRKDW 60
Query: 61 KPSRLLWVGRYPMRYSQA-----------YKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ R + + +K+ +++ G GL T+ E V++ F+ Y
Sbjct: 61 TGSKLILGKRKVLEKALGETPEEEYKDNLHKLGEYIEGLIGLLFTDETPETVKAYFSAYV 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQ------------FTHEMEPFLRKQ-GMPVRLNKGVV 156
D+ R S + +PEG + +H MEP LR + MP ++ G +
Sbjct: 121 KSDYPRAKSKSPITFVIPEGIVYSRGGQVAEEEDVPMSHSMEPTLRNKFKMPTKIVSGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
L + V E+G L A IL+ G+ A F++ + E E+
Sbjct: 181 TLPEPYKVVEKGDVLDVRQALILKTFGVACADFRVEMRAYHDGESGEV 228
>gi|444725212|gb|ELW65787.1| mRNA turnover protein 4 like protein [Tupaia chinensis]
Length = 319
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 61/96 (63%)
Query: 105 FNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVV 164
F KY + D+AR G+ A L GPLEQ H +EP LR+ G+P L +G + L+SD+ V
Sbjct: 33 FMKYVEMDYARAGNKAAFTASLDPGPLEQSPHSLEPQLRQLGLPTALKRGALTLLSDYEV 92
Query: 165 CEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
C+EG L P+ AR+L+L G +MA FK+ + W A+
Sbjct: 93 CKEGDVLMPKQARVLKLSGYEMAEFKVTMKYVWDAQ 128
>gi|406604529|emb|CCH44017.1| mRNA turnover protein 4 [Wickerhamomyces ciferrii]
Length = 238
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 24/228 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKG+E+K I + +R A++ Y+ +++F +++R ++ R
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKNRIFDEVREALDTYRFVWLFYLDDVRTPVLQDIRSDW 60
Query: 61 KPSRLLWVGRYPMRYSQAYKV-----------SKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ R + + K+ SK G TGL TN E S F Y
Sbjct: 61 VGSKLILGKRRVLEKALGDKIEDEYKENLSKFSKLADGVTGLLFTNEDVETTSSYFAAYT 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQ------------FTHEMEPFLRKQ-GMPVRLNKGVV 156
D++R S + +PEG + +H +E +R + +P ++ G +
Sbjct: 121 KQDYSRAKSKSPIDFTIPEGIIYSRGGQISIEDDVPMSHSLEETMRNKFKIPTKIKAGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFEL 204
+ + V +G L A IL+ GI + FK+ + + E E+
Sbjct: 181 TINEPYHVVNKGDVLDVRQALILKQFGIAASEFKVKVKAYYDNETSEI 228
>gi|344232416|gb|EGV64295.1| hypothetical protein CANTEDRAFT_113948 [Candida tenuis ATCC 10573]
gi|344232417|gb|EGV64296.1| hypothetical protein CANTEDRAFT_113948 [Candida tenuis ATCC 10573]
Length = 217
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 38/225 (16%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KKGKE+KE I + +R+A++ +K ++V +++R +E R
Sbjct: 1 MPRSKRSKLVTLAQTDKKGKENKERIFDEVRSALDEFKYVFVLRLDDVRTPVLQEIRSDW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
SRL+ R + + +++SK G GL TN VE FN Y
Sbjct: 61 AGSRLILGKRRVLEKALGDTTAEEYKDDLHQLSKLCDGVVGLLFTNEEINTVEDYFNAYT 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLRKQ-GMPVRLNKGVV 156
D++R + A +PEG +E+ +H +E LR + +P ++ G V
Sbjct: 121 KQDYSRAKTRAPIDFTIPEGIVYSRGGQISIEEDVTMSHSLEETLRNKFKIPTKMKSGDV 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAED 201
L A IL+ GI + FK+ ++ + E+
Sbjct: 181 --------------LDVRQALILKQFGIAASEFKVQMLGYYDGEN 211
>gi|209879772|ref|XP_002141326.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209556932|gb|EEA06977.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 223
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 14/217 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
M +S+R R L K K K KE ++N +R +K IYV +N RN K FR+++
Sbjct: 1 MARSRRVRLSALVKDKDKRKERNIDLINKVRECCTCFKYIYVVILQNQRNSLLKLFRKKL 60
Query: 61 KPSRLLWVGRYPMRYSQAYK-----------VSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
++ +R + K +S+ L G L +N+ E+ +
Sbjct: 61 GDGHFIFGKNKVLRLALGVKPQDEINNNISSISQLLKGERALIFSNLIPSEMMKICEDSS 120
Query: 110 DYDFARTGSTATEKVELPEGP-LEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
+F RTGS L G +++ + L K G+ R+ ELVSDF VCE G
Sbjct: 121 SLEFGRTGSIPGISYVLTAGCNIKEKLTLPDTVLHKLGLETRIQGENYELVSDFTVCETG 180
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWSAEDFELY 205
PL+ + A++L+ LGI+ F++ + W D +LY
Sbjct: 181 VPLTNKQAQVLKYLGIQTVKFEIIIEAFWY--DGKLY 215
>gi|448086101|ref|XP_004196020.1| Piso0_005460 [Millerozyma farinosa CBS 7064]
gi|359377442|emb|CCE85825.1| Piso0_005460 [Millerozyma farinosa CBS 7064]
Length = 232
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 114/227 (50%), Gaps = 24/227 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T+KK + +K I + +R+A++ Y+ ++V +++R +E R
Sbjct: 1 MPRSKRSKLVTLAQTEKKDRSNKVRIFDDVRSALDTYRYVWVLKLDDVRTPVLQEIRNDW 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
S+L+ +G P K+S L G +GL T+ E V++ FN Y
Sbjct: 61 TGSKLILGKRKVLVKALGDSPEEEYKDDLSKISSSLSGMSGLLFTDETPETVQAYFNAYT 120
Query: 110 DYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLR-KQGMPVRLNKGVV 156
DF+R S+A +P G P+E+ +H +E LR K MP ++ G +
Sbjct: 121 RQDFSRAKSSAPIDFTIPSGVVYSRGGQIPIEEDVPMSHSLEETLRNKYLMPTKMKAGKI 180
Query: 157 ELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFE 203
L +VVC++G L A IL+ G+ + FK+ +I + + E
Sbjct: 181 VLDEPYVVCKKGDTLDVRQALILKQFGVAESEFKVPIIAYFDGKTSE 227
>gi|340959551|gb|EGS20732.1| hypothetical protein CTHT_0025680 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 226
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 11/155 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKR R L + KKG+E KE + ++IR + Y+ +VFS +NMRN K+ R ++
Sbjct: 1 MPKSKRARVYHLIQVNKKGREAKERLFSNIRETIPKYQHCFVFSVDNMRNNYLKDVRHEL 60
Query: 61 KPSRLLW---------VGRYP--MRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE 109
R+ + +G P + ++++++L G GL TN ++ES F+
Sbjct: 61 NDCRIFFGKTKLMARALGTTPEEEQADGLHRLTRYLTGTVGLLFTNRDPADIESYFSNLS 120
Query: 110 DYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRK 144
DFAR G+ A V +P G + + P R+
Sbjct: 121 QVDFARAGTVAPRTVTVPTGIVYSTGGDGPPRARR 155
>gi|344300279|gb|EGW30619.1| hypothetical protein SPAPADRAFT_63450 [Spathaspora passalidarum
NRRL Y-27907]
Length = 232
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%), Gaps = 27/226 (11%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKR + VTL++T KK KE+K I + +R+A++ ++ ++V +++R ++ R
Sbjct: 1 MPRSKRSKLVTLAQTDKKTKENKTRIFDEVRSALDEHQYVWVLQLQDIRTPVLQDIRSDW 60
Query: 61 KPSRLLW---------VGRYPMR--YSQAYKVSKFLC--GNTGLFLTNMPKEEVESLFNK 107
S+LL +G P +++SK C G GL T+ + V+ F
Sbjct: 61 AGSKLLLGKRKVLIKALGETPADEYRDNLHELSK-TCEDGLIGLLFTDEKPDVVDGYFKA 119
Query: 108 YEDYDFARTGSTATEKVELPEG---------PLEQ---FTHEMEPFLR-KQGMPVRLNKG 154
Y D++R + + +PEG P+E+ +H +E LR K +P ++ G
Sbjct: 120 YVKQDYSRAKTKSPIDFTIPEGIVYSRGGQIPIEEDVPMSHSLEETLRNKLKVPTKIKSG 179
Query: 155 VVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
+ L + + VC +G L A +L+ G+ + FK+ I + +
Sbjct: 180 KIVLEAPYTVCHKGDVLDVRQALLLKQFGVAGSEFKVATIAYYDRD 225
>gi|171686394|ref|XP_001908138.1| hypothetical protein [Podospora anserina S mat+]
gi|170943158|emb|CAP68811.1| unnamed protein product [Podospora anserina S mat+]
Length = 229
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 73/148 (49%), Gaps = 22/148 (14%)
Query: 79 YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG--------- 129
+ ++ +L G+ GL TN EE++S F DFAR GS AT +P+G
Sbjct: 34 HLLAPYLTGSVGLIFTNRTPEEIKSYFESLTQVDFARAGSVATRDFVIPKGLVYSTGGEV 93
Query: 130 PLEQ---FTHEMEPFLRKQGMPVRLNKGVVELVSD----------FVVCEEGKPLSPESA 176
P E H +EP LR+ G+P R+ KG V L D + VC+EG+ L
Sbjct: 94 PKEHDVPVAHTLEPELRRLGVPCRMVKGKVCLGVDEEGNGFQEEGYTVCKEGEVLDSRQT 153
Query: 177 RILRLLGIKMATFKLHLICRWSAEDFEL 204
R+L+L + MA FK+ L+ W A E+
Sbjct: 154 RLLKLFSVCMAEFKVELLAVWKAAGGEV 181
>gi|344235122|gb|EGV91225.1| mRNA turnover protein 4-like [Cricetulus griseus]
Length = 117
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 48/76 (63%)
Query: 79 YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEM 138
++VSK L G GL TN KEEV F KY + DFAR G+ AT V L GPLEQF H M
Sbjct: 6 FQVSKKLRGEVGLLFTNRTKEEVNEWFTKYTEMDFARAGNKATLTVSLDPGPLEQFPHSM 65
Query: 139 EPFLRKQGMPVRLNKG 154
EP LR+ G+P L KG
Sbjct: 66 EPQLRQLGLPTALKKG 81
>gi|344236111|gb|EGV92214.1| mRNA turnover protein 4-like [Cricetulus griseus]
Length = 91
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 138 MEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
MEP LR+QG+P+ L KGVV L+SD+ VC+EG L+PE AR+L+L G +MA FK+ + W
Sbjct: 1 MEPQLRQQGLPIALKKGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMW 60
Query: 198 SAED--FELYREGLDESDVES 216
A+ F+ L ES ES
Sbjct: 61 DAKSGRFQKMDNDLPESTAES 81
>gi|402913580|ref|XP_003919261.1| PREDICTED: mRNA turnover protein 4 homolog, partial [Papio anubis]
Length = 126
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%)
Query: 79 YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEM 138
++VSK L G GL TN KEEV F KY + D+AR G+ A V L GPLEQF H M
Sbjct: 26 HQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDPGPLEQFPHSM 85
Query: 139 EPFLRKQGMPVRLNKGV 155
EP LR+ G+P L +G+
Sbjct: 86 EPQLRQLGLPTTLKRGM 102
>gi|354508260|ref|XP_003516171.1| PREDICTED: mRNA turnover protein 4 homolog, partial [Cricetulus
griseus]
Length = 73
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 45/73 (61%)
Query: 81 VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP 140
VSK L G GL TN KEEV F KY + DFAR G+ AT V L GPLEQF H MEP
Sbjct: 1 VSKKLRGEVGLLFTNRTKEEVNEWFTKYTEMDFARAGNKATLTVSLDPGPLEQFPHSMEP 60
Query: 141 FLRKQGMPVRLNK 153
LR+ G+P L K
Sbjct: 61 QLRQLGLPTALKK 73
>gi|291510256|gb|ADE10084.1| ribosomal protein L10 P0 [Tremella fuciformis]
Length = 117
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 10/92 (10%)
Query: 117 GSTATEKVELPEGPL----------EQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCE 166
G+ A+ + LPEGP+ + F H MEP LR+ G+ L KGV L +C
Sbjct: 2 GAKASTSITLPEGPILTPYTEPASGDPFPHSMEPQLRQLGLATALVKGVPALNHPHALCR 61
Query: 167 EGKPLSPESARILRLLGIKMATFKLHLICRWS 198
+G+ LS E RIL+LLG++MA F++HL RWS
Sbjct: 62 DGEKLSSEQCRILKLLGVQMAEFRIHLGSRWS 93
>gi|339246827|ref|XP_003375047.1| mRNA turnover protein 4-like protein [Trichinella spiralis]
gi|316971687|gb|EFV55433.1| mRNA turnover protein 4-like protein [Trichinella spiralis]
Length = 161
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+SKRD+ V+L+ KKKG+E KE + I + N S F+ ++ KF +
Sbjct: 1 MPRSKRDKEVSLTVVKKKGREGKENVFCGIVSNSSNEPSQA--CFQRKQSGKFVQIEFNA 58
Query: 61 KPSRLLWVGRYPMRYSQAYKVS-KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGST 119
S V ++ R + + + + L N+ K E +FAR+G+
Sbjct: 59 GWSTWTDVLQFVCRRCNKVRTAVEIVHAFAALLCRNL---------KKLEQPEFARSGNK 109
Query: 120 ATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKG 154
ATE + +P GPLEQF +EP LRK G+PV L KG
Sbjct: 110 ATETITIPAGPLEQFQFTIEPLLRKLGLPVTLEKG 144
>gi|443917464|gb|ELU38179.1| ribosomal l10 domain-containing protein [Rhizoctonia solani AG-1
IA]
Length = 400
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 34/201 (16%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQ------------ 77
IR + +K +VFS +MRN K+ R Q K + ++ R +
Sbjct: 42 IRENAQKWKYAWVFSVGDMRNAALKDIRTQWKGTGRMFCARNTVMVKAIGSTPEEEVRPG 101
Query: 78 ---AYKVSKFLCGNTGLFLTNMPKEEVESLFN-KYEDYDFARTGST-------------- 119
KVS + G T + K S + Y+ R +
Sbjct: 102 LHVVTKVSNYAAGLVMYLPTRLQKAGFCSCWKCSYKGGCTPRRCAVQYPHQLTELIVSVI 161
Query: 120 ---ATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESA 176
++ P+ P H +EP LR+ G+ RL +GV + + VVC++G+ L+ E A
Sbjct: 162 LGPVCDQTPSPDPPTP-LAHALEPRLRQLGLSTRLVRGVPTISAPHVVCKDGQQLTAEQA 220
Query: 177 RILRLLGIKMATFKLHLICRW 197
+LRLLGI+M F++ IC W
Sbjct: 221 ALLRLLGIQMTEFRIKCICWW 241
>gi|410927092|ref|XP_003977000.1| PREDICTED: mRNA turnover protein 4 homolog, partial [Takifugu
rubripes]
Length = 108
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 59/106 (55%), Gaps = 11/106 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L+KT KKG E K+ ++ +R V+ Y+++++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKISLTKTVKKGLEVKQKLITELRQCVDTYRNLFIFSVANMRNSKIKDIRTAW 60
Query: 61 KPSRLLWVGRYPMRYS-----------QAYKVSKFLCGNTGLFLTN 95
K SR + M + +KVSK L G GL TN
Sbjct: 61 KHSRFFFGKNKVMIIALGKGDTDEYRDNLHKVSKQLRGEVGLLFTN 106
>gi|302853161|ref|XP_002958097.1| hypothetical protein VOLCADRAFT_84328 [Volvox carteri f.
nagariensis]
gi|300256565|gb|EFJ40828.1| hypothetical protein VOLCADRAFT_84328 [Volvox carteri f.
nagariensis]
Length = 321
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 32/185 (17%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKVSKFL-------- 85
++ Y ++ + +N+ + +F + R+ ++P+ ++ +G+ M Y V K+L
Sbjct: 22 LQTYDKAFIVNADNVGSKQFMDIRKALRPNSVILMGKNTM---MRYCVEKYLEETGDHRW 78
Query: 86 -C-----------GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQ 133
C GN G+ TN +V+ KY+ AR G+TA E V + G
Sbjct: 79 ECLVKPGKKGLLEGNVGIVFTNGDLSQVKDEIAKYKVGAPARVGATANEDVVIKAG---- 134
Query: 134 FTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATF 189
M+P F + G+ ++NKG +E+VSD VV + G + A +L LGIK +
Sbjct: 135 -GTGMDPSQTSFFQALGIATKINKGTIEIVSDVVVVKTGDRVGASQATLLAKLGIKPFKY 193
Query: 190 KLHLI 194
L ++
Sbjct: 194 GLQIL 198
>gi|449523986|ref|XP_004169004.1| PREDICTED: NAD-dependent malic enzyme 59 kDa isoform,
mitochondrial-like [Cucumis sativus]
Length = 229
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 42/57 (73%)
Query: 7 DRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPS 63
D + K ++KG++HK+ V SIR VENY S++VF+ ENMRNLKFKE REQ+K +
Sbjct: 172 DSTLLYQKQRRKGRDHKKSTVESIRQTVENYNSVFVFTVENMRNLKFKELREQLKST 228
>gi|392350475|ref|XP_003750667.1| PREDICTED: LOW QUALITY PROTEIN: mRNA turnover protein 4 homolog,
partial [Rattus norvegicus]
Length = 176
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 54/200 (27%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
+PKSK D+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 2 IPKSKGDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNAKLKDIR--- 58
Query: 61 KPSRLLWVGRYPMRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTA 120
A+K S+ G + + + G +
Sbjct: 59 ----------------NAWKHSQMFFGKNKVMMVAL--------------------GCS- 81
Query: 121 TEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILR 180
P + H++ LR + + N+ C+EG L+PE AR+L+
Sbjct: 82 ------PSDEYKDNLHQVSKXLRDEVGFLSTNR--------MNECKEGDMLTPEQARVLK 127
Query: 181 LLGIKMATFKLHLICRWSAE 200
L G ++A FK+ + W +
Sbjct: 128 LFGYEVAEFKVTIKYMWDSH 147
>gi|392342210|ref|XP_003754532.1| PREDICTED: LOW QUALITY PROTEIN: mRNA turnover protein 4 homolog
[Rattus norvegicus]
Length = 186
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 54/200 (27%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
+PKSK D+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 12 IPKSKGDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNAKLKDIR--- 68
Query: 61 KPSRLLWVGRYPMRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTA 120
A+K S+ G + + + G +
Sbjct: 69 ----------------NAWKHSQMFFGKNKVMMVAL--------------------GCS- 91
Query: 121 TEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILR 180
P + H++ LR + + N+ C+EG L+PE AR+L+
Sbjct: 92 ------PSDEYKDNLHQVSKXLRDEVGFLSTNR--------MNECKEGDMLTPEQARVLK 137
Query: 181 LLGIKMATFKLHLICRWSAE 200
L G ++A FK+ + W +
Sbjct: 138 LFGYEVAEFKVTIKYMWDSH 157
>gi|159477927|ref|XP_001697060.1| acidic ribosomal protein P0 [Chlamydomonas reinhardtii]
gi|158274972|gb|EDP00752.1| acidic ribosomal protein P0 [Chlamydomonas reinhardtii]
Length = 320
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM---------------RYSQA 78
++ Y ++ +N+ + +F + R+ ++P ++ +G+ M R+
Sbjct: 22 LQTYDKAFIVHADNVGSRQFMDIRKALRPGAVILMGKNTMMRFCVEKYLEETGDHRWECL 81
Query: 79 YKVSK--FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTH 136
K K L GN G+ TN +V+ KY+ AR G+ A E V + G
Sbjct: 82 VKPGKKGLLEGNVGIVFTNGDLSQVKDEIAKYKVGAPARVGAVAPEDVVIKAG-----GT 136
Query: 137 EMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLH 192
M+P F + G+ ++NKG +E+VSD VV + G+ + P A +L LG+K FK
Sbjct: 137 GMDPSQTSFFQALGIATKINKGTIEIVSDVVVVKAGERVGPSQATLLAKLGVK--PFKYG 194
Query: 193 LICRWSAEDFELY 205
L+ E +Y
Sbjct: 195 LLILKVIESGAVY 207
>gi|50287951|ref|XP_446404.1| 60S acidic ribosomal protein P0 [Candida glabrata CBS 138]
gi|49525712|emb|CAG59331.1| unnamed protein product [Candida glabrata]
Length = 311
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 88/179 (49%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKSI+V +N+ + + + R+ ++ ++ +G+ M R + +
Sbjct: 15 LREYLEEYKSIFVVGVDNVSSQQMHQVRKALRGRGVVLMGKNTMVRRAIRGFISDLPDYE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN ++++ + + AR+G+ A E + + + ME
Sbjct: 75 KLLPFIKGNVGFIFTNESLKDIKEVIVANKVAAPARSGAVAPEDIWV-----KAMNTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V E G + P A +L LL I T+ L ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVEAGNRVGPSEASLLNLLNISPFTYGLTVV 188
>gi|363754297|ref|XP_003647364.1| hypothetical protein Ecym_6159 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891001|gb|AET40547.1| hypothetical protein Ecym_6159 [Eremothecium cymbalariae
DBVPG#7215]
Length = 312
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 19/189 (10%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
+E K + +R+ +E YKS+++ +N+ + + E R+ ++ ++ +G+ M
Sbjct: 5 REKKAEYFSKLRDYLEEYKSVFIVGVDNVSSQQMHEVRKALRGRAVVLMGKNTMVRRAVR 64
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
+ K+ F+ GN G TN P E++ + + AR G+ A E +
Sbjct: 65 GLISDFPDYEKLLPFVKGNVGFVFTNDPLSEIKDVIISNKVAAPARPGAIAPEDIW---- 120
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
+ MEP F + G+P ++ +G +E+ SD V + GK + A +L LL I
Sbjct: 121 -VRAVNTGMEPGKTSFFQALGVPTKIARGTIEITSDVNVVQAGKKVGASEASLLNLLNIS 179
Query: 186 MATFKLHLI 194
T+ L ++
Sbjct: 180 PFTYGLTVV 188
>gi|126460439|ref|YP_001056717.1| acidic ribosomal protein P0 [Pyrobaculum calidifontis JCM 11548]
gi|126250160|gb|ABO09251.1| LSU ribosomal protein L10P [Pyrobaculum calidifontis JCM 11548]
Length = 344
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 9/186 (4%)
Query: 26 IVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKP---SRLLWVGRYPMRYSQAY--- 79
IV ++ Y+ +++F + E+R +++P +++ + + Y++ Y
Sbjct: 22 IVQEATELLQKYQYVFLFDLHGLSARILGEYRYKLRPYGAVKIIKPTLFKIAYAKVYGGV 81
Query: 80 --KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++++ + G G F TN EV L KY AR G A + +P GP
Sbjct: 82 PVEIAEKVRGEVGFFFTNHNPAEVVKLVAKYAVRRAARPGDKAPFDIVIPAGPTNASPGP 141
Query: 138 MEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI-CR 196
+ K +P R+ +G + + D VV + G+ ++PE A +LR++GI+ L LI
Sbjct: 142 IISKFGKLKIPTRVQEGKIWIAKDTVVAKAGQEITPEMAEVLRVVGIEPIFESLRLIGVL 201
Query: 197 WSAEDF 202
W + F
Sbjct: 202 WKGKRF 207
>gi|367002572|ref|XP_003686020.1| 60S acidic ribosomal protein P0 [Tetrapisispora phaffii CBS 4417]
gi|357524320|emb|CCE63586.1| hypothetical protein TPHA_0F01000 [Tetrapisispora phaffii CBS 4417]
Length = 314
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQAY 79
+R E YKS++V +N+ + + + R+ ++ ++ +G+ M
Sbjct: 15 LREYFEEYKSLFVVGVDNVSSQQMHQVRKALRGRGVVLMGKNTMVRRAIRGIVQEMPDLE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN +E++ + + AR G+ A E + + ME
Sbjct: 75 KLVPFIRGNVGFIFTNSSLQEIKEVIISNKVSAPARAGAVAPEDIWV-----TAVNTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V E G + P A +L LL I T+ L ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVEAGNKVGPSEASLLNLLNISPFTYGLTVV 188
>gi|194379904|dbj|BAG58304.1| unnamed protein product [Homo sapiens]
Length = 145
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRL 65
K SR+
Sbjct: 61 KHSRM 65
>gi|426222832|ref|XP_004005586.1| PREDICTED: mRNA turnover protein 4 homolog [Ovis aries]
Length = 92
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 45/66 (68%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ V+L+KT KKG E K+ ++ +R V+ YK +++FS NMRN K K+ R
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KPSRLL 66
K SR+
Sbjct: 61 KHSRMF 66
>gi|254564587|ref|XP_002489404.1| 60S acidic ribosomal protein P0 [Komagataella pastoris GS115]
gi|238029200|emb|CAY67120.1| Conserved ribosomal protein P0 similar to rat P0, human P0, and E.
coli L10e [Komagataella pastoris GS115]
gi|328349833|emb|CCA36233.1| 60S acidic ribosomal protein P0 [Komagataella pastoris CBS 7435]
Length = 312
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 85/181 (46%), Gaps = 19/181 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAY-------- 79
N +R +E+YKSI++ +N+ + + E R+ ++ ++ +G+ M
Sbjct: 13 NKLRELLESYKSIFIVGVDNVSSQQMHEVRQTLRGKAVILMGKNTMVRKALRDFVEELPV 72
Query: 80 --KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
K+ F+ GN G TN + + + + AR G+ A V +P G
Sbjct: 73 FEKLLPFVRGNIGFVFTNEDLKTIRDVIIENRVAAPARPGAIAPLDVFIPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++++G +E+ SD V E+ + P A++L +L I T+ L +
Sbjct: 128 MEPGKTSFFQALGVPTKISRGTIEITSDVKVVEKDSRVGPSEAQLLNMLNISPFTYGLTV 187
Query: 194 I 194
+
Sbjct: 188 V 188
>gi|156101529|ref|XP_001616458.1| 60S acidic ribosomal protein PO [Plasmodium vivax Sal-1]
gi|148805332|gb|EDL46731.1| 60S acidic ribosomal protein PO, putative [Plasmodium vivax]
Length = 221
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 40 IYVFSFENMRNLKFKEFREQIKPSRLLWVGRYP-MRYS-----------QAYKVSKFLCG 87
IY+ N K+ E KP+ ++G+ M+ + KV++ L G
Sbjct: 43 IYILDVRTYSNNNLKQAIEYFKPNGRFFIGKNKLMKLALGTSEKDEAKPNVCKVAELLVG 102
Query: 88 NTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGM 147
N L +T P +V FN+++ ++ + G+ T+ V L G + M+ L+K+ +
Sbjct: 103 NRILLITKDPPLKVIKFFNEFQPEEYIKPGNICTQNVTLKFGDVLNVPVSMQKDLQKRKV 162
Query: 148 PVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDF 202
+ + + D V+ E+ K +S E+A++LR+L +K+A F + ++ W+ F
Sbjct: 163 TFDIVDQKIVIRKDKVLAEKDKLVSAENAKLLRMLNMKIANFDITVLGYWNVNKF 217
>gi|221057406|ref|XP_002261211.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|194247216|emb|CAQ40616.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 221
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 40 IYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--------RYSQA----YKVSKFLCG 87
IY+ N K+ E KP+ ++G+ + S+A KV++ L G
Sbjct: 43 IYILDVRTYSNNNLKQAIEYFKPNGRFFIGKNKLMKLALGTDEKSEAKPNVCKVAELLVG 102
Query: 88 NTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGM 147
N L +T P +V FN ++ ++ + G+ T+ V L G + M+ L+K+ +
Sbjct: 103 NRILLITKDPPLKVIKFFNDFQPEEYIKPGNICTQNVTLKTGDVLNVPVSMQKDLQKRKV 162
Query: 148 PVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDF 202
+ + + D ++ E+ K +S E+A++LR+L +K+A F + ++ W+ F
Sbjct: 163 TFDIVDQKIVIREDKILAEKDKLVSAENAKLLRMLNMKIANFDITVLGYWNLNKF 217
>gi|426258955|ref|XP_004023068.1| PREDICTED: mRNA turnover protein 4 homolog, partial [Ovis aries]
Length = 83
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 146 GMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELY 205
G+P L KGVV L+SD+ VC+EG L+PE AR+L+L G +MA FK+ + W A+
Sbjct: 1 GLPTALKKGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVSIKYMWDAQSGRFQ 60
Query: 206 REGLD 210
+ G D
Sbjct: 61 QMGDD 65
>gi|66362748|ref|XP_628340.1| ribosomal protein of the PO/L10 family [Cryptosporidium parvum Iowa
II]
gi|46229393|gb|EAK90211.1| ribosomal protein of the PO/L10 family [Cryptosporidium parvum Iowa
II]
gi|323509133|dbj|BAJ77459.1| cgd7_1600 [Cryptosporidium parvum]
gi|323510217|dbj|BAJ78002.1| cgd7_1600 [Cryptosporidium parvum]
Length = 222
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 23/219 (10%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
M KSKR + V ++K KK ++ K I+ ++ + +K IYV +N RN K+ R ++
Sbjct: 1 MAKSKRVKKVLMTKDLKKKRKDKSEIIENVHEYIGKFKFIYVVKLKNQRNAALKQLRVRL 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
+P +LL VG+ + A+K+S FL G GL T++ + + +
Sbjct: 61 EPGKLL-VGKNKLLQVAFGADSDSESAKNAHKISSFLRGERGLIFTDLAPSNLNKVLEES 119
Query: 109 EDYDFARTGSTA--TEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSD---FV 163
+F R GS + T VE P LE E ++RKQ ++ L SD +
Sbjct: 120 STMEFGREGSLSDITCVVE-PNTELECLYKNAEFYMRKQFPQLK----PTLLGSDQGKVI 174
Query: 164 VCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDF 202
+CE+G PL+ +L+ L I F++ I E+
Sbjct: 175 ICEKGNPLNKYQYLLLKHLEIPSVKFEIKPIACLHNEEL 213
>gi|389584376|dbj|GAB67108.1| 60S acidic ribosomal protein PO [Plasmodium cynomolgi strain B]
Length = 221
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 83/175 (47%), Gaps = 12/175 (6%)
Query: 40 IYVFSFENMRNLKFKEFREQIKPSRLLWVGRYP-MRYS-----------QAYKVSKFLCG 87
IY+ N K+ E KP+ ++G+ M+ + KV++ L G
Sbjct: 43 IYILDVRTYSNNNLKQAIEYFKPNGRFFIGKNKLMKLALGTDEKTEAKPNVSKVAELLVG 102
Query: 88 NTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGM 147
N L +T P +V FN ++ ++ + G+ T+ V L G + M+ L+K+ +
Sbjct: 103 NRILLITKDPPLKVIKFFNDFQPEEYIKPGNICTQNVTLKIGDVLNVPVSMQKDLQKRKV 162
Query: 148 PVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDF 202
+ + + D ++ E+ K +S E+A++LR+L +K+A F + ++ W+ F
Sbjct: 163 TFDIVDQKIVIREDKILAEKDKLVSTENAKLLRMLNMKIANFDITVLGYWNLNKF 217
>gi|67624595|ref|XP_668580.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54659815|gb|EAL38378.1| hypothetical protein Chro.70189 [Cryptosporidium hominis]
Length = 222
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 27/221 (12%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
M KSKR + V ++K KK ++ K I+ ++ + +K IYV +N RN K+ R ++
Sbjct: 1 MAKSKRVKKVLMTKDLKKKRKDKSEIIENVHEYIGKFKFIYVVKLKNQRNAALKQLRVRL 60
Query: 61 KPSRLLWVGRYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKY 108
+P +LL VG+ + A+K+S FL G GL T++ + + +
Sbjct: 61 EPGKLL-VGKNKLLQVAFGADSDSESAKNAHKISSFLRGERGLIFTDLAPSNLNKVLEES 119
Query: 109 EDYDFARTGSTA--TEKVELPEGPLEQFTHEMEPFLRKQGMPVR-----LNKGVVELVSD 161
+F R GS + T VE P LE E ++RKQ ++ ++G V
Sbjct: 120 STMEFGREGSLSDITCVVE-PNTELECLYKNAEFYMRKQFPQLKPTLFGSDQGKV----- 173
Query: 162 FVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDF 202
++CE+G PL+ +L+ L I F++ I E+
Sbjct: 174 -IICEKGNPLNKYQYLLLKHLEIPSVKFEIKPIACLHNEEL 213
>gi|302804214|ref|XP_002983859.1| hypothetical protein SELMODRAFT_268802 [Selaginella moellendorffii]
gi|300148211|gb|EFJ14871.1| hypothetical protein SELMODRAFT_268802 [Selaginella moellendorffii]
Length = 322
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGR--------- 70
+E KE+ + + +ENY + + +N+ + + ++ R ++P ++ +G+
Sbjct: 8 QEKKEIYDRKMVDLLENYTKALICAADNVGSTQLQQIRRGLRPESVVLMGKNTLMKRTIR 67
Query: 71 -YPMRYSQAYKVS--KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELP 127
Y R +S L GN GL T +EV KY+ AR G A V +P
Sbjct: 68 TYAERSGNTAVLSLMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPIDVTIP 127
Query: 128 EGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMA 187
G F + +P ++NKG VE+VS + ++G+ + A +L LGI+
Sbjct: 128 PGS-TGLDPSQTSFFQVLNIPTKINKGTVEIVSSVELIKKGEKVGSSEAALLAKLGIR-- 184
Query: 188 TFKLHLICRWSAEDFELY 205
F L+ + +D ++
Sbjct: 185 PFSYGLVVQMVYDDGSVF 202
>gi|402083570|gb|EJT78588.1| 60S acidic ribosomal protein P0 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 313
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY------ 79
+ ++ +E YKSI++ +N+ + + E R+ ++ ++ +G+ M R + +
Sbjct: 13 DKLKGLLEEYKSIFIVGVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRALKTFLTDSPE 72
Query: 80 --KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++ F+ GN G TN + + AR G+ A + V +P G
Sbjct: 73 YERLLPFVKGNVGFVFTNDDLKVIRDKILANRVRAPARAGAVAPDDVWVPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+ +D + E G + P A +L +L I T+ L +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISPFTYGLTI 187
>gi|340905014|gb|EGS17382.1| ribosomal protein P0-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 312
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQ 77
+ ++ +E Y SI+V S +N+ + + E R+ ++ ++ +G+ M + +
Sbjct: 13 DKLKGLLEEYPSIFVVSVDNVSSQQMHEIRKALRGQGVVLMGKNTMVRRALKTFMPDHPE 72
Query: 78 AYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++ F+ GN G TN +EV AR G+ A V +P G
Sbjct: 73 YERLLPFVKGNVGFVFTNGDLKEVREKILSNRIKAPARAGAIAPVDVWVPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+ +D + E G + P A +L +L I T+ + +
Sbjct: 128 MEPGKTSFFQALGIPTKIARGTIEITTDIKLVEAGAKVGPSEATLLNMLNISPFTYGMGI 187
>gi|302754772|ref|XP_002960810.1| hypothetical protein SELMODRAFT_437282 [Selaginella moellendorffii]
gi|300171749|gb|EFJ38349.1| hypothetical protein SELMODRAFT_437282 [Selaginella moellendorffii]
Length = 321
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGR--------- 70
+E KE+ + + +ENY + + +N+ + + ++ R ++P ++ +G+
Sbjct: 8 QEKKEIYDRKMVDLLENYTKALICAADNVGSTQLQQIRRGLRPESVVLMGKNTLMKRTIR 67
Query: 71 -YPMRYSQAYKVS--KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELP 127
Y R +S L GN GL T +EV KY+ AR G A V +P
Sbjct: 68 TYAERSGNMAVLSLMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPIDVTIP 127
Query: 128 EGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMA 187
G F + +P ++NKG VE+VS + ++G+ + A +L LGI+
Sbjct: 128 PGS-TGLDPSQTSFFQVLNIPTKINKGTVEIVSSVELIKKGEKVGSSEAALLAKLGIR-- 184
Query: 188 TFKLHLICRWSAEDFELY 205
F L+ + +D ++
Sbjct: 185 PFSYGLVVQMVYDDGSVF 202
>gi|255719047|ref|XP_002555804.1| 60S acidic ribosomal protein P0 [Lachancea thermotolerans]
gi|238937188|emb|CAR25367.1| KLTH0G17820p [Lachancea thermotolerans CBS 6340]
Length = 311
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKS++V +N+ + + E R+ ++ ++ +G+ M R + +
Sbjct: 15 LREYLEEYKSVFVVGVDNVSSQQMHEVRKDLRGRGVVLMGKNTMVRRAIRGFLSDLPDFE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN ++++ + AR G A E + + ME
Sbjct: 75 KLLPFVKGNVGFVFTNDSLKDIKEVITSNVVAAPARAGGIAPEDIWV-----RAVNTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V + G + A +L LL I F L ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGTKVGASEAALLNLLNISPFVFGLTVV 188
>gi|389626681|ref|XP_003710994.1| 60S acidic ribosomal protein P0 [Magnaporthe oryzae 70-15]
gi|59803168|gb|AAX07734.1| 60S acidic ribosomal protein-like protein [Magnaporthe grisea]
gi|351650523|gb|EHA58382.1| 60S acidic ribosomal protein P0 [Magnaporthe oryzae 70-15]
gi|440463490|gb|ELQ33070.1| 60S acidic ribosomal protein P0 [Magnaporthe oryzae Y34]
gi|440481080|gb|ELQ61700.1| 60S acidic ribosomal protein P0 [Magnaporthe oryzae P131]
Length = 313
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-RYSQAYKVSK--- 83
+ ++ +E YKSI++ +N+ + + E R+ ++ ++ +G+ M R + VS+
Sbjct: 13 DKLKGLLEEYKSIFIVGVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRALKTFVSESPE 72
Query: 84 ------FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++ GN G TN +E+ + AR G+ A + V +P G
Sbjct: 73 YERLLPYVKGNVGFVFTNSDLKEIRDKILQNRVRAPARAGAVAPDDVWIPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+ +D + E G + A +L +L I T+ L +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGGKVGASEATLLNMLNISPFTYGLTV 187
>gi|68471065|ref|XP_720309.1| likely cytosolic ribosomal acidic protein P0 [Candida albicans
SC5314]
gi|77022572|ref|XP_888730.1| hypothetical protein CaO19_7015 [Candida albicans SC5314]
gi|46442171|gb|EAL01462.1| likely cytosolic ribosomal acidic protein P0 [Candida albicans
SC5314]
gi|76573543|dbj|BAE44627.1| hypothetical protein [Candida albicans]
Length = 312
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 19/189 (10%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQ 77
+E K + +R +E YKSI+V +N+ + + E R+ ++ ++ +G+ M R +
Sbjct: 5 REKKVQYFSKLRELLEEYKSIFVVGVDNVSSQQMHEIRKALRGDAVVLMGKNTMVRRAIR 64
Query: 78 AY--------KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
+ K+ F+ GN G TN + + + AR G+ A + V +P G
Sbjct: 65 GFLSELPEFEKLLPFIKGNVGFIFTNGDLKSIRDIVVSNVVAAPARAGAVAPKDVWIPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD V E+ + P A +L +L I
Sbjct: 125 -----NTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVEQDAKVGPSEATLLNMLNIS 179
Query: 186 MATFKLHLI 194
T+ + ++
Sbjct: 180 PFTYGMSVV 188
>gi|448537151|ref|XP_003871276.1| Rpp0 ribosomal protein [Candida orthopsilosis Co 90-125]
gi|380355633|emb|CCG25151.1| Rpp0 ribosomal protein [Candida orthopsilosis]
Length = 312
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKSI++ +N+ + + E R+ ++ ++ +G+ M R + +
Sbjct: 15 LRELLEEYKSIFIVGVDNVSSQQMHEIRKALRDDAVVLMGKNTMVRRAIRGFLSELPDYE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN + + A+ G+ A V +P G ME
Sbjct: 75 KLLPFVKGNVGFIFTNADLKTIRDTITSNVVAAPAKAGAVAPADVYIPAG-----NTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLIC 195
P F + G+P ++ +G +E+VSD V E+ + P A +L +L I T+ L ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVEKDGKVGPSEATLLNMLNISPFTYGLTVVQ 189
Query: 196 RW 197
+
Sbjct: 190 VY 191
>gi|354544315|emb|CCE41038.1| hypothetical protein CPAR2_300270 [Candida parapsilosis]
Length = 312
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKSI++ +N+ + + E R+ ++ ++ +G+ M R + +
Sbjct: 15 LRELLEEYKSIFIVGVDNVSSQQMHEIRKALRGDAVVLMGKNTMVRRAIRGFLSELPDYE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN + + A+ G+ A V +P G ME
Sbjct: 75 KLLPFVKGNVGFIFTNADLKTIRDTITSNVVAAPAKAGAVAPADVYIPAG-----NTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLIC 195
P F + G+P ++ +G +E+VSD V E+ + P A +L +L I T+ L ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVEKDGKVGPSEATLLNMLNISPFTYGLTVVQ 189
Query: 196 RW 197
+
Sbjct: 190 VY 191
>gi|119871980|ref|YP_929987.1| acidic ribosomal protein P0 [Pyrobaculum islandicum DSM 4184]
gi|119673388|gb|ABL87644.1| LSU ribosomal protein L10P [Pyrobaculum islandicum DSM 4184]
Length = 343
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 9/186 (4%)
Query: 26 IVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKP---SRLLWVGRYPMRYSQAY--- 79
IV + ++ Y+ I++F + E+R +++P +++ + + +++AY
Sbjct: 22 IVEEAIDLLKRYQYIFLFDLHGLSARILHEYRYRLRPYGQIKIIKPTLFKIAFTKAYGGV 81
Query: 80 --KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
+++ + G G F TN EV + + A+ G A + +P GP
Sbjct: 82 PIDIAEKVRGEIGFFFTNANPAEVIKIIAENSVRRAAKPGDKAPFDIVVPAGPTNASPGP 141
Query: 138 MEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI-CR 196
+ K +P R+ +G + +V D VV + G+ ++PE A +LR++GI+ +L LI
Sbjct: 142 IISKFGKLKIPTRVQEGKIWIVKDTVVAKAGQEITPEIAEVLRVVGIEPIFEQLRLIGVI 201
Query: 197 WSAEDF 202
W + F
Sbjct: 202 WKGKRF 207
>gi|323332404|gb|EGA73813.1| Rpp0p [Saccharomyces cerevisiae AWRI796]
gi|323336373|gb|EGA77641.1| Rpp0p [Saccharomyces cerevisiae Vin13]
gi|323353860|gb|EGA85715.1| Rpp0p [Saccharomyces cerevisiae VL3]
Length = 312
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKS++V +N+ + + E R++++ ++ +G+ M R + +
Sbjct: 15 LREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRGFLSDLPDFE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN P E++S+ AR G+ A E + + ME
Sbjct: 75 KLLPFVKGNVGFVFTNEPLTEIKSVIVSNRVAAPARAGAVAPEDIWV-----RAVNTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V + G + A +L LL I TF L ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFGLTVV 188
>gi|207342817|gb|EDZ70463.1| YLR340Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 210
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKS++V +N+ + + E R++++ ++ +G+ M R + +
Sbjct: 15 LREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRGFLSDLPDFE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN P E++S+ AR G+ A E + + ME
Sbjct: 75 KLLPFVKGNVGFVFTNEPLTEIKSVIVSNRVAAPARAGAVAPEDIWV-----RAVNTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V + G + A +L LL I TF L ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFGLTVV 188
>gi|225711938|gb|ACO11815.1| mRNA turnover protein 4 homolog [Lepeophtheirus salmonis]
Length = 143
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 16/125 (12%)
Query: 1 MPKSKRDRPVTLSKTKKK-GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ 59
MPKSKRD+ V+L+KT KK G E K +V+ IR +++ Y +++F EN RNL ++ R +
Sbjct: 1 MPKSKRDKKVSLTKTDKKVGLESKRALVDKIRESLDAYTRVFIFETENARNLHLQKIRRE 60
Query: 60 IKPSR---LLWVGRYPM------RYSQA------YKVSKFLCGNTGLFLTNMPKEEVESL 104
K + + ++G+ + R ++ +K+S L G GL TN ++
Sbjct: 61 WKEDKGGSVFFMGKNRVMSLALGRSAEEEVGPGLHKISALLNGQRGLLFTNETLDDSLDY 120
Query: 105 FNKYE 109
F K +
Sbjct: 121 FQKKQ 125
>gi|151940865|gb|EDN59247.1| ribosomal protein P0 [Saccharomyces cerevisiae YJM789]
gi|190405388|gb|EDV08655.1| ribosomal protein P0 [Saccharomyces cerevisiae RM11-1a]
Length = 312
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKS++V +N+ + + E R++++ ++ +G+ M R + +
Sbjct: 15 LREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRGFLSDLPDFE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN P E++S+ AR G+ A E + + ME
Sbjct: 75 KLLPFVKGNVGFVFTNEPLTEIKSVIVSNRVAAPARAGAVAPEDIWV-----RAVNTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V + G + A +L LL I TF L ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFGLTVV 188
>gi|323347818|gb|EGA82082.1| Mrt4p [Saccharomyces cerevisiae Lalvin QA23]
Length = 170
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 79 YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG--------- 129
Y++SK G TGL T+ V+ F Y D++R + A +PEG
Sbjct: 24 YQLSKLCSGVTGLLFTDEDVNTVKEYFKSYVRSDYSRPNTKAPLTFTIPEGIVYSRGGQI 83
Query: 130 PLEQ---FTHEMEPFLRKQ-GMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
P E+ H +EP +R + +P ++ G + + S ++VC EG+ L A IL+ GI
Sbjct: 84 PAEEDVPMIHSLEPTMRNKFEIPTKIKAGKITIDSPYLVCTEGEKLDVRQALILKQFGIA 143
Query: 186 MATFKLHLICRW 197
+ FK+ + +
Sbjct: 144 ASEFKVKVSAYY 155
>gi|241957187|ref|XP_002421313.1| 60S acidic ribosomal protein P0 [Candida dubliniensis CD36]
gi|223644657|emb|CAX40647.1| 60S acidic ribosomal protein, putative [Candida dubliniensis CD36]
Length = 312
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKSI+V +N+ + + E R+ ++ ++ +G+ M R + +
Sbjct: 15 LRELLEEYKSIFVVGVDNVSSQQMHEIRKALRGDAVVLMGKNTMVRRAIRGFLSELPEFE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN + + AR G+ A + V +P G ME
Sbjct: 75 KLLPFIKGNVGFIFTNSDLKTIRDTVVSNVVAAPARAGAVAPKDVWIPAG-----NTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V E+ + P A +L +L I T+ + ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVEQDAKVGPSEATLLNMLNISPFTYGMSVV 188
>gi|332796978|ref|YP_004458478.1| 50S ribosomal protein L10 [Acidianus hospitalis W1]
gi|332694713|gb|AEE94180.1| ribosomal protein L10 [Acidianus hospitalis W1]
Length = 333
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 7/178 (3%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQA-------Y 79
V ++ ++ +K++ + S + K E R++ + + + V + + A
Sbjct: 18 VKELKEKIKQHKTVIIASLDGFPTDKLHEIRKKFRDTMEIKVSKNKLFERAAKESGIDVS 77
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ ++L G +N E+ + +K++ +A G A E+V +P G M
Sbjct: 78 KIEQYLTGTNAFIFSNKNPFEISLMLSKFKLKRYALPGDKADEEVVIPAGDTGIPAGPMI 137
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
K +P R+ G + + D VV E G+P+ PE +L+ LGI KL L +
Sbjct: 138 SVFGKLKIPTRVQDGKIAITKDTVVAEPGQPIPPEIVPVLQKLGIMPVYVKLRLKVAY 195
>gi|344231951|gb|EGV63830.1| ribosomal protein P0 [Candida tenuis ATCC 10573]
Length = 313
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQ 77
+E K + +R +E YKSI+V +N+ + + E R+ ++ + +G+ M R +
Sbjct: 5 REKKAEYFSKLRELLEEYKSIFVVGVDNVSSQQMHEIRKALRSDATVLMGKNTMVRRAIR 64
Query: 78 AY--------KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
+ K+ F+ GN G TN + + + AR G+ A V +P G
Sbjct: 65 GFLAELPEYEKLLPFVKGNVGFIFTNADLKTIRDVVTSNVVAAPARAGAVAPFDVWVPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD V E + + P A +L +L I
Sbjct: 125 -----NTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVEANQKVGPSEASLLNMLNIS 179
Query: 186 MATFKLHLI 194
T+ + ++
Sbjct: 180 PFTYGMTVV 188
>gi|149234680|ref|XP_001523219.1| 60S acidic ribosomal protein P0 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146453008|gb|EDK47264.1| 60S acidic ribosomal protein P0 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 314
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKSI+V +N+ + + E R+ ++ ++ +G+ M R + +
Sbjct: 15 LRELLEEYKSIFVVGVDNVSSQQMHEIRKALRDDAVVLMGKNTMVRRAIRGFLSELPDYE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN + + AR G+ A V +P G ME
Sbjct: 75 KLLPFVKGNVGFIFTNGDLKTIRDTITSNVVAAPARAGAVAPADVWIPAG-----NTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V E+ + P A +L +L I T+ + ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVEKDAKVGPSEATLLNMLNISPFTYGMTVV 188
>gi|323303768|gb|EGA57553.1| Rpp0p [Saccharomyces cerevisiae FostersB]
Length = 312
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKS++V +N+ + + E R++++ ++ +G+ M R + +
Sbjct: 15 LREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRGFLSDLPDFE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN P E++++ AR G+ A E + + ME
Sbjct: 75 KLLPFVKGNVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWV-----RAVNTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V + G + A +L LL I TF L ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFGLTVV 188
>gi|6323371|ref|NP_013444.1| ribosomal protein P0 [Saccharomyces cerevisiae S288c]
gi|308153499|sp|P05317.2|RLA0_YEAST RecName: Full=60S acidic ribosomal protein P0; Short=A0; AltName:
Full=L10E
gi|315113308|pdb|3IZS|SS Chain s, Localization Of The Large Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
gi|377656240|pdb|3J16|G Chain G, Models Of Ribosome-Bound Dom34p And Rli1p And Their
Ribosomal Binding Partners
gi|171806|gb|AAA34729.1| ribosomal protein L10e [Saccharomyces cerevisiae]
gi|171808|gb|AAA34730.1| L10e protein [Saccharomyces cerevisiae]
gi|609387|gb|AAB67258.1| Rpl10ep [Saccharomyces cerevisiae]
gi|285813748|tpg|DAA09644.1| TPA: ribosomal protein P0 [Saccharomyces cerevisiae S288c]
gi|323307932|gb|EGA61190.1| Rpp0p [Saccharomyces cerevisiae FostersO]
gi|349580040|dbj|GAA25201.1| K7_Rpp0p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297840|gb|EIW08939.1| Rpp0p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 312
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKS++V +N+ + + E R++++ ++ +G+ M R + +
Sbjct: 15 LREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRGFLSDLPDFE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN P E++++ AR G+ A E + + ME
Sbjct: 75 KLLPFVKGNVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWV-----RAVNTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V + G + A +L LL I TF L ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFGLTVV 188
>gi|409048760|gb|EKM58238.1| hypothetical protein PHACADRAFT_171498 [Phanerochaete carnosa
HHB-10118-sp]
Length = 313
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
+ KE+ ++ V + SI+V + +N+ + + + R ++ ++ +G+ M
Sbjct: 5 RAQKELYFQKLKELVARHPSIFVVNVDNVGSNQMHQIRVALRGKGVVVMGKNTMVRRALR 64
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
Y Q K+ + GN G T+ +E+ L + AR S A V +P G
Sbjct: 65 SILAEYPQFEKLLPHVRGNIGFVFTSHDLKEIRDLITANKVAAPARANSFAPLDVTIPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD V G + A +L LL I
Sbjct: 125 -----NTGMEPGKTSFFQALGIPTKIARGTIEIVSDVQVVSAGTRVGASEATLLNLLNIS 179
Query: 186 MATFKLHLI 194
T+ + ++
Sbjct: 180 PFTYGMTIV 188
>gi|256270289|gb|EEU05505.1| Rpp0p [Saccharomyces cerevisiae JAY291]
gi|259148317|emb|CAY81564.1| Rpp0p [Saccharomyces cerevisiae EC1118]
gi|365764143|gb|EHN05668.1| Rpp0p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 312
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKS++V +N+ + + E R++++ ++ +G+ M R + +
Sbjct: 15 LREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRGFLSDLPDFE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN P E++++ AR G+ A E + + ME
Sbjct: 75 KLLPFVKGNVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWV-----RAVNTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V + G + A +L LL I TF L ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFGLTVV 188
>gi|146422123|ref|XP_001487003.1| hypothetical protein PGUG_00379 [Meyerozyma guilliermondii ATCC
6260]
gi|146388124|gb|EDK36282.1| hypothetical protein PGUG_00379 [Meyerozyma guilliermondii ATCC
6260]
Length = 310
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E Y+SI+V +N+ + + E R ++ ++ +G+ M R + +
Sbjct: 15 LRELLETYQSIFVVGVDNVSSQQMHEIRRALRGEGVVLMGKNTMVRRALRGFLADLPDFE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN + V A+ G+ A V +P G ME
Sbjct: 75 KLLPFVKGNVGFIFTNSDLKSVRDTITSNVVAAPAKAGAVAPADVWIPAG-----NTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V E+ + P A +L +L I T+ L ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVEKDGKVGPSEATLLNMLNISPFTYGLTVV 188
>gi|260942185|ref|XP_002615391.1| hypothetical protein CLUG_04273 [Clavispora lusitaniae ATCC 42720]
gi|238850681|gb|EEQ40145.1| hypothetical protein CLUG_04273 [Clavispora lusitaniae ATCC 42720]
Length = 311
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 19/172 (11%)
Query: 37 YKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY--------KVSKFLC 86
YKSI+V +N+ + + E R+ ++ + +G+ M R + + K+ F+
Sbjct: 22 YKSIFVVGVDNVSSQQMHEIRKALRGDATVLMGKNTMVRRAIRGFLTELPEYEKLLPFVR 81
Query: 87 GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP----FL 142
GN G TN + + + AR G+ A + V +P G MEP F
Sbjct: 82 GNVGFIFTNKDLKSIREVVTSNVVAAPARAGAVAPKDVWVPAG-----NTGMEPGKTSFF 136
Query: 143 RKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
+ G+P ++ +G +E+VSD V E G + P A +L LL I T+ + ++
Sbjct: 137 QALGVPTKIARGTIEIVSDVKVVEAGTKVGPSEASLLNLLNISPFTYGMTVV 188
>gi|365767335|pdb|3U5I|QQ Chain q, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 60s
Subunit, Ribosome B
gi|410562521|pdb|4B6A|QQ Chain q, Cryo-Em Structure Of The 60s Ribosomal Subunit In Complex
With Arx1 And Rei1
Length = 312
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKS++V +N+ + + E R++++ ++ +G+ M R + +
Sbjct: 15 LREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRGFLSDLPDFE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN P E++++ AR G+ A E + + ME
Sbjct: 75 KLLPFVKGNVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWV-----RAVNTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V + G + A +L LL I TF L ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFGLTVV 188
>gi|58269216|ref|XP_571764.1| L10e protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134114437|ref|XP_774147.1| 60S acidic ribosomal protein P0 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256780|gb|EAL19500.1| hypothetical protein CNBG4470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228000|gb|AAW44457.1| L10e protein, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 312
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 19/192 (9%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
+ +KE+ +R +E Y SI+V + +N+ + + R+ ++ ++ +G+ M
Sbjct: 5 RANKELYFEKLRALIEKYPSIFVVNIDNVSSQQCHMIRQALRGKGVVLMGKNTMVRRAIR 64
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
+ Q K+ F+ GN G T+ ++V + + AR G+ A V +P G
Sbjct: 65 TILPEFPQFEKLMPFVKGNIGFVFTSGDLKDVREIIISNKVAAPARAGAFAPNDVYVPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD V G + P A +L +L I
Sbjct: 125 -----NTGMEPGKTSFFQALGIPTKIARGTIEIVSDVQVVAAGSKVGPSEATLLNMLNIS 179
Query: 186 MATFKLHLICRW 197
T+ + ++ +
Sbjct: 180 PFTYGMTVVQVY 191
>gi|444321853|ref|XP_004181582.1| hypothetical protein TBLA_0G01150 [Tetrapisispora blattae CBS 6284]
gi|387514627|emb|CCH62063.1| hypothetical protein TBLA_0G01150 [Tetrapisispora blattae CBS 6284]
Length = 312
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 19/189 (10%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQ 77
+E K N +R E YKSI++ +N+ + + + R+ ++ ++ +G+ M R +
Sbjct: 5 REKKTEYFNKLREYFEEYKSIFIVGVDNVSSQQMHQVRKNLRGRGVVLMGKNTMVRRAIR 64
Query: 78 AY--------KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
+ K+ F+ GN G TN +E++ + + AR G+ A E + +
Sbjct: 65 GFVNDLPDLEKLLPFVRGNVGFIFTNDSLQEIKEVIISNKVAAPARAGAIAPEDIWV--- 121
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD V E G + P A +L LL I
Sbjct: 122 --TAVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVEAGNKVGPSEAALLNLLNIS 179
Query: 186 MATFKLHLI 194
T+ L ++
Sbjct: 180 PFTYGLTVV 188
>gi|405122031|gb|AFR96799.1| L10e protein [Cryptococcus neoformans var. grubii H99]
Length = 312
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 19/192 (9%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
+ +KE+ +R +E Y SI+V + +N+ + + R+ ++ ++ +G+ M
Sbjct: 5 RANKELYFEKLRALIEKYPSIFVVNIDNVSSQQCHMIRQALRGKGVVLMGKNTMVRRAIR 64
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
+ Q K+ F+ GN G T+ ++V + + AR G+ A V +P G
Sbjct: 65 TILPEFPQFEKLMPFVKGNIGFVFTSGDLKDVREIIIANKVAAPARAGAFAPNDVYVPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD V G + P A +L +L I
Sbjct: 125 -----NTGMEPGKTSFFQALGIPTKIARGTIEIVSDVQVVAAGSKVGPSEATLLNMLNIS 179
Query: 186 MATFKLHLICRW 197
T+ + ++ +
Sbjct: 180 PFTYGMTVVQVY 191
>gi|302785041|ref|XP_002974292.1| hypothetical protein SELMODRAFT_149765 [Selaginella moellendorffii]
gi|302807947|ref|XP_002985667.1| hypothetical protein SELMODRAFT_181962 [Selaginella moellendorffii]
gi|300146576|gb|EFJ13245.1| hypothetical protein SELMODRAFT_181962 [Selaginella moellendorffii]
gi|300157890|gb|EFJ24514.1| hypothetical protein SELMODRAFT_149765 [Selaginella moellendorffii]
Length = 318
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQ 77
+E KEV + + +E Y + + +N+ + + ++ R ++P ++ +G+ + R +
Sbjct: 8 QEKKEVYDRKMVDLLETYSKALICAADNVGSNQLQQIRRGLRPESVVLMGKNTLMKRTIR 67
Query: 78 AY----------KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELP 127
Y + L GN GL T +EV KY+ AR G A V +P
Sbjct: 68 TYAEKSGNTTVLSLMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPIDVTIP 127
Query: 128 EGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMA 187
G F + +P ++NKG VE+VS + ++G+ + A +L LGI+
Sbjct: 128 PGS-TGLDPSQTSFFQVLNIPTKINKGTVEIVSSVELIKKGEKVGSSEAALLAKLGIR-- 184
Query: 188 TFKLHLICRWSAEDFELY 205
F L+ + +D ++
Sbjct: 185 PFSYGLVVQMVYDDGSVF 202
>gi|321261511|ref|XP_003195475.1| 60S acidic ribosomal protein [Cryptococcus gattii WM276]
gi|317461948|gb|ADV23688.1| 60S acidic ribosomal protein, putative [Cryptococcus gattii WM276]
Length = 312
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 19/192 (9%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
+ +KE+ +R +E Y SI+V + +N+ + + R+ ++ ++ +G+ M
Sbjct: 5 RANKELYFEKLRALIEKYPSIFVVNIDNVSSQQCHMIRQALRGKGVVLMGKNTMVRRAIR 64
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
+ Q K+ F+ GN G T+ ++V + + AR G+ A V +P G
Sbjct: 65 TILPEFPQFEKLMPFVKGNIGFVFTSGDLKDVREIIIANKVAAPARAGAFAPNDVYVPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD V G + P A +L +L I
Sbjct: 125 -----NTGMEPGKTSFFQALGIPTKIARGTIEIVSDVQVVAAGSKVGPSEATLLNMLNIS 179
Query: 186 MATFKLHLICRW 197
T+ + ++ +
Sbjct: 180 PFTYGMTVVQVY 191
>gi|406604655|emb|CCH43913.1| 60S acidic ribosomal protein P0 [Wickerhamomyces ciferrii]
Length = 312
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKSI++ +N+ + + E R+ ++ ++ +G+ M R + +
Sbjct: 15 LRELLEEYKSIFIVGVDNVSSQQMHEVRKALRGKAVILMGKNTMVRRAIRGFLSELPDYE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ ++ GN G TN +++ + + AR G+ A V +P +E
Sbjct: 75 KLLPYVKGNVGFVFTNSDLKDIRDVIIDNKVAAPARAGAFAPADVWVP-----AINTGLE 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V E G + P A +L LL I T+ L +I
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVEAGAKVGPSEASLLNLLNISPFTYGLAVI 188
>gi|323347282|gb|EGA81555.1| Rpp0p [Saccharomyces cerevisiae Lalvin QA23]
Length = 312
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKS++V +N+ + + E R++++ ++ +G+ M R + +
Sbjct: 15 LREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRGFLSDLPDFE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN P E++ + AR G+ A E + + ME
Sbjct: 75 KLLPFVKGNVGFVFTNEPLTEIKXVIVSNRVAAPARAGAVAPEDIWV-----RAVNTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V + G + A +L LL I TF L ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFGLTVV 188
>gi|403215637|emb|CCK70136.1| hypothetical protein KNAG_0D03900 [Kazachstania naganishii CBS
8797]
Length = 313
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKSI+V +N+ + + E R+ ++ ++ +G+ M R + +
Sbjct: 15 LREYLEEYKSIFVVGVDNVSSQQMHEVRKALRGEGVVLMGKNTMVRRAIRGFLSDLPDYE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN ++++ + + AR G+ A E + + ME
Sbjct: 75 KLLPFVRGNVGFIFTNASLKDIKDVIVANKVAAPARAGAVAPEDIWV-----TAVNTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V E G + P A +L +L I T+ L ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVEAGTRVGPSEATLLNMLNISPFTYGLTVV 188
>gi|344299786|gb|EGW30139.1| hypothetical protein SPAPADRAFT_63750 [Spathaspora passalidarum
NRRL Y-27907]
Length = 312
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKSI+V +N+ + + E R+ ++ ++ +G+ M R + +
Sbjct: 15 LRELLEEYKSIFVVGVDNVSSQQMHEIRKALRGDAVVLMGKNTMVRRAIRGFLSELPEFE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN + + AR G+ A V +P G ME
Sbjct: 75 KLLPFVKGNVGFIFTNADLKTIRDTVVSNVVAAPARAGAVAPLDVWIPAG-----NTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V E + + P A +L +L I T+ + ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVEADQKVGPSEATLLNMLNISPFTYGMTVV 188
>gi|332021525|gb|EGI61890.1| mRNA turnover protein 4-like protein [Acromyrmex echinatior]
Length = 329
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 18/117 (15%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MPKSKRD+ ++L+KT +KG K+ I+ ++ VE Y I++ S +N RN K + R +
Sbjct: 165 MPKSKRDKKISLTKTDRKGLVLKQRIMEDVKKCVEEYSCIFLISIQNTRNTKLLDLRSEW 224
Query: 61 KPSRLLW-----------------VGRYPMRYSQAYKVSKFLCGNTGLFLTNMPKEE 100
K S+L + V + + A K + + G GL TN P+++
Sbjct: 225 KDSKLFFGKLRIIALGLGKSKETEVAEGIHKLANAMK-NHSMRGQCGLLFTNRPRKQ 280
>gi|167520384|ref|XP_001744531.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776862|gb|EDQ90480.1| predicted protein [Monosiga brevicollis MX1]
Length = 310
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQA--------YKVSKFL 85
+E + I + +N+ + + ++ R ++ + L +G+ M +++ +
Sbjct: 21 LEKFSRILIVHADNVGSKQMQDIRAALRGNCELLMGKNTMVRRALLDHENEIFHELLPHI 80
Query: 86 CGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQ 145
GN GL TN + + ++ AR G+ A E + +P GP Q + F +
Sbjct: 81 KGNVGLLFTNDDFVAIRDVLLDHKVAAPARVGAIAPEPIIIPAGPTGQDAQKTS-FFQAL 139
Query: 146 GMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
+P ++ KG +E++S+ + EEG + P A +L +LGI ++ L ++
Sbjct: 140 NIPTKIAKGSIEIISEVRLLEEGGRVGPSEAALLNMLGISPFSYGLVVV 188
>gi|336274114|ref|XP_003351811.1| 60S acidic ribosomal protein P0 [Sordaria macrospora k-hell]
gi|380096093|emb|CCC06140.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 312
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAYKVSK-- 83
+ ++ +E+YKSI++ S +N+ + + E R+ ++ ++ +G+ M R + + +
Sbjct: 13 DKLKGLLEDYKSIFIVSVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRALKTFVIDTPE 72
Query: 84 ------FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
F+ GN G TN +E+ + AR G+ A V +P G
Sbjct: 73 YERLLPFVKGNVGFVFTNGDLKEIRDKILANKVAAPARAGAVAPADVWVPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+ +D + E G + P A +L +L I T+ + +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGVKVGPSEATLLNMLNISPFTYGMGI 187
>gi|336464067|gb|EGO52307.1| 60S acidic ribosomal protein P0 [Neurospora tetrasperma FGSC 2508]
Length = 318
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAYKVSK-- 83
+ ++ +E+Y+SI++ S +N+ + + E R+ ++ ++ +G+ M R + + V
Sbjct: 13 DKLKGLLEDYRSIFIVSVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRALKTFVVDTPE 72
Query: 84 ------FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
F+ GN G TN +EV + AR G+ A V +P G
Sbjct: 73 YERLLPFVKGNVGFVFTNGDLKEVRDKILANKVAAPARAGAIAPADVWVPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+ +D + E G + P A +L +L I T+ + +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISPFTYGMGI 187
>gi|350296149|gb|EGZ77126.1| 60S acidic ribosomal protein P0 [Neurospora tetrasperma FGSC 2509]
Length = 313
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAYKVSK-- 83
+ ++ +E+Y+SI++ S +N+ + + E R+ ++ ++ +G+ M R + + V
Sbjct: 13 DKLKGLLEDYRSIFIVSVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRALKTFLVDTPE 72
Query: 84 ------FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
F+ GN G TN +EV + AR G+ A V +P G
Sbjct: 73 YERLLPFVKGNVGFVFTNGDLKEVRDKILANKVAAPARAGAIAPADVWVPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+ +D + E G + P A +L +L I T+ + +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISPFTYGMGI 187
>gi|171687509|ref|XP_001908695.1| hypothetical protein [Podospora anserina S mat+]
gi|41688720|sp|Q9C3Z6.1|RLA0_PODAS RecName: Full=60S acidic ribosomal protein P0
gi|12963430|gb|AAK11262.1|AF331714_1 ribosomal protein P0 [Podospora anserina]
gi|170943716|emb|CAP69368.1| unnamed protein product [Podospora anserina S mat+]
Length = 314
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAYKVSK-- 83
+ ++ +E YKSI++ S +N+ + + E R+ ++ ++ +G+ M R + + V
Sbjct: 13 DKLKGLLEEYKSIFIVSVDNVSSQQMHEIRQALRDQGVVLMGKNTMVRRALKTFLVDSPE 72
Query: 84 ------FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
F+ GN G TN +E+ + AR G+ A V +P G
Sbjct: 73 YERLLPFVKGNVGFVFTNGDLKEIRDKILANKVAAPARAGAVAPVDVWIPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+ +D + E G + P A +L +L I T+ + +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISPFTYGMGI 187
>gi|50425433|ref|XP_461310.1| 60S acidic ribosomal protein P0 [Debaryomyces hansenii CBS767]
gi|49656979|emb|CAG89711.1| DEHA2F22242p [Debaryomyces hansenii CBS767]
Length = 310
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQ 77
+E K + +R +E YKSI++ +N+ + + E R+ ++ + +G+ M R +
Sbjct: 5 REKKVQYFSKLRELLEEYKSIFIVGVDNVSSQQMHEIRKALRGDATVLMGKNTMVRRALR 64
Query: 78 AY--------KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
+ K+ F+ GN G TN + + A+ G+ A + V +P G
Sbjct: 65 GFLADLPEYEKLMPFVRGNVGFIFTNSDLKTIRDTIVSNVVAAPAKAGAVAPKDVWIPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD V E + P A +L +L I
Sbjct: 125 -----NTGMEPGKTSFFQALGVPTKIARGTIEIVSDVRVVETNSKVGPSEATLLNMLDIS 179
Query: 186 MATFKLHLI 194
T+ + ++
Sbjct: 180 PFTYGMSVV 188
>gi|410081064|ref|XP_003958112.1| hypothetical protein KAFR_0F03810 [Kazachstania africana CBS 2517]
gi|372464699|emb|CCF58977.1| hypothetical protein KAFR_0F03810 [Kazachstania africana CBS 2517]
Length = 311
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKS++V +N+ + + E R+ ++ ++ +G+ M R + +
Sbjct: 15 LREYLEEYKSVFVVGVDNVSSQQMHEVRKALRGRGVVLMGKNTMVRRAIRGFIADLPDYE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN ++++ AR G+ A E + + ME
Sbjct: 75 KLLPFIKGNVGFIFTNDSLKDIKEEIVSNTVAAPARAGAVAPEDIWV-----TAVNTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V E G + P A +L LL I TF L ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVEAGNKVGPSEAALLNLLNISPFTFGLTVV 188
>gi|365759340|gb|EHN01134.1| Rpp0p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401840538|gb|EJT43319.1| RPP0-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 312
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKS++V +N+ + + E R++++ ++ +G+ M R + +
Sbjct: 15 LREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRGFLTELPDFE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGP-LEQFTHEM 138
K+ F+ GN G TN P +++ + R + A PE + M
Sbjct: 75 KLLPFVKGNVGFVFTNEPLSDIKEVIVS------NRLAAPARAGAVAPEDIWVRAINTGM 128
Query: 139 EP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
EP F + G+P ++ +G +E+VSD V + G + A +L LL I TF L ++
Sbjct: 129 EPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGTRVGQSEAALLNLLNISPFTFGLTVV 188
>gi|85089944|ref|XP_958183.1| 60S acidic ribosomal protein P0 [Neurospora crassa OR74A]
gi|30316271|sp|Q96TJ5.1|RLA0_NEUCR RecName: Full=60S acidic ribosomal protein P0
gi|13899020|gb|AAK48941.1|AF361225_1 60S ribosomal protein P0 [Neurospora crassa]
gi|13899022|gb|AAK48942.1| 60S ribosomal protein P0 [Neurospora crassa]
gi|28919517|gb|EAA28947.1| 60S acidic ribosomal protein P0 [Neurospora crassa OR74A]
Length = 313
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 86/180 (47%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY------ 79
+ ++ +E+Y+SI++ S +N+ + + E R+ ++ ++ +G+ M R + +
Sbjct: 13 DKLKGLLEDYRSIFIVSVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRALKTFVADTPE 72
Query: 80 --KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++ F+ GN G TN +EV + AR G+ A V +P G
Sbjct: 73 YERLLPFVKGNVGFVFTNGDLKEVRDKILANKVAAPARAGAIAPADVWIPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+ +D + E G + P A +L +L I T+ + +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISPFTYGMGI 187
>gi|124514062|ref|XP_001350387.1| ribosome biogenesis protein MRT4, putative [Plasmodium falciparum
3D7]
gi|23615804|emb|CAD52796.1| ribosome biogenesis protein MRT4, putative [Plasmodium falciparum
3D7]
Length = 222
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 1 MPKSKRDRPVTLSKTKKKGK--EHKEVIVNSIRNAVENYKS-IYVFSFENMRNLKFKEFR 57
MPKSKR+ ++L+K KKK E K++ + I+ ++ +YV N K
Sbjct: 1 MPKSKRNVKISLTKVKKKVNKKEMKDLKLLEIKKMIQIPNVYVYVLDIRTYSNNNLKVAI 60
Query: 58 EQIKPSRLLWVGRYP-MRYSQAY-----------KVSKFLCGNTGLFLTNMPKEEVESLF 105
E KP+ ++G+ M+ + K+S+ L GN L +T V F
Sbjct: 61 EHFKPNGKFFIGKNKLMKLALGINENNEVKPNMSKISELLIGNRILLITKDGPLSVLKFF 120
Query: 106 NKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVC 165
N+++ ++ + G+ + + + L G + M+ L+K+ + + + L + V+
Sbjct: 121 NEFQPEEYIKHGNISPQDITLKCGEVLNVPVSMQKDLQKRKLNFDIVDQKIILKENKVLA 180
Query: 166 EEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDF 202
E+ K +S E+++ILR+L +K+A F + ++ W + F
Sbjct: 181 EKDKLISLENSKILRMLNMKIAFFDITVLGYWYLDKF 217
>gi|412991196|emb|CCO16041.1| 60S acidic ribosomal protein P0 [Bathycoccus prasinos]
Length = 315
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 95/196 (48%), Gaps = 22/196 (11%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-----------RYSQAYKV- 81
++NY S + +N+ + +F + R ++P+ ++ +G+ + + + + V
Sbjct: 20 LDNYDSALLVHCDNVGSKQFMDIRTALRPNSVVLMGKNTLMRKIIGNYCDEKGNNDWMVL 79
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG--PLEQFTHEME 139
L GN G+ T +EV++ +++ A+ GSTAT V +P G PLE
Sbjct: 80 HDLLIGNVGVIFTKEDVKEVKTKVSEFVVPAPAKVGSTATCDVTIPAGVTPLEP---SQT 136
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLG-IKMATFKLHLICRWS 198
F + + ++NKG +E++SD V +G+ + +A LLG +K+ F+ L+ +
Sbjct: 137 GFFQLLNIATKINKGAIEILSDVTVVTKGERVGSSAA---ALLGKMKITPFEYGLVVKHI 193
Query: 199 AEDFELYREG-LDESD 213
+ +Y LD +D
Sbjct: 194 YDKGSMYPAAVLDITD 209
>gi|402468519|gb|EJW03667.1| hypothetical protein EDEG_02016 [Edhazardia aedis USNM 41457]
Length = 203
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 93/195 (47%), Gaps = 12/195 (6%)
Query: 12 LSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRY 71
++ +KK + KE + I N + YK++ + + R+ ++ R+ ++ + G+
Sbjct: 1 MAVAQKKKRNTKEYENSKILNLTKEYKNLLLVEATDQRSSFLQKLRDLVRVDSKIIFGKR 60
Query: 72 PM--RYSQAYKVSKF------LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEK 123
M + +A K+SK + G+ L TN +E+ ++ E F R +E
Sbjct: 61 KMLIKSLEATKISKINKLTTKMAGSFFLLFTNRDAQEMVKFISEIEVKGFLRPNEICSED 120
Query: 124 VELPEGPLE----QFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARIL 179
+ LP G ++ + E LR+ +PV + +G V ++ +CE+ + + +++L
Sbjct: 121 IVLPSGIVKINDSDVPVDFEKVLRRFNVPVVIQQGKVICQEEYKICEKDRKIDVSQSKLL 180
Query: 180 RLLGIKMATFKLHLI 194
R+ G ++A KL ++
Sbjct: 181 RMFGYELAVLKLKVL 195
>gi|145356478|ref|XP_001422456.1| Cytosolic 80S ribosomal protein P0; Cytosolic 60S large ribosomal
subunit protein P0 [Ostreococcus lucimarinus CCE9901]
gi|144582699|gb|ABP00773.1| Cytosolic 80S ribosomal protein P0; Cytosolic 60S large ribosomal
subunit protein P0 [Ostreococcus lucimarinus CCE9901]
Length = 313
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 31/196 (15%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------RYSQA----- 78
+ ++NY + + +N+ + +F + R I+P ++ +G+ + Y A
Sbjct: 16 VHKLLDNYDTALLVHADNVGSKQFMDIRASIRPESVVLMGKNTLMRKCISNYCAAKGDDT 75
Query: 79 -YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
+S L GN G+ T +V ++ AR G+ A +V +P GP
Sbjct: 76 WMILSNKLVGNVGIIFTKGDLLDVRKKIQQFVVPAPARVGAIAPVEVVVPAGP-----TG 130
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLG-IKMATFKLH 192
MEP F + + ++NKG +E+++D VV + G +S +A LLG +K F
Sbjct: 131 MEPSQTSFFQTLNIATKINKGTIEILNDIVVLQPGDRVSSSAA---ALLGKMKFTPFTYG 187
Query: 193 LICRWSAEDFELYREG 208
LI E+Y +G
Sbjct: 188 LIV------MEVYDKG 197
>gi|341581837|ref|YP_004762329.1| acidic ribosomal protein P0 [Thermococcus sp. 4557]
gi|340809495|gb|AEK72652.1| acidic ribosomal protein P0 [Thermococcus sp. 4557]
Length = 339
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------RYSQAY- 79
V + N ++++ I + N+ + RE+++ LL V R + R +Q
Sbjct: 12 VEELANIIKSHPVIALVDVANVPAYPLSKMREKLRGKALLRVSRNTLIELAIKRAAQELN 71
Query: 80 -----KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQF 134
K+ + G G+ T M ++ L + + A+ G+ V +P GP
Sbjct: 72 NPDLEKLIDHIQGGAGILATEMNPFKLYKLLEESKTPAPAKPGAVVPRDVVIPAGPTSIS 131
Query: 135 THEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
+ ++ G+P R+ KG V + D+ V + G+ ++ + ARIL LGI+ L+L+
Sbjct: 132 PGPLVGEMQALGIPARIEKGKVSIQKDYTVLKAGEVITDQLARILNALGIEPLEVGLNLL 191
Query: 195 CRWSAEDFELYRE---GLDESD 213
+ ED +Y +DES+
Sbjct: 192 AAY--EDGIVYTPEVLAIDESE 211
>gi|255731328|ref|XP_002550588.1| 60S acidic ribosomal protein P0 [Candida tropicalis MYA-3404]
gi|240131597|gb|EER31156.1| 60S acidic ribosomal protein P0 [Candida tropicalis MYA-3404]
Length = 313
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKSI+V +N+ + + E R+ ++ ++ +G+ M R + +
Sbjct: 15 LRELLEEYKSIFVVGVDNVSSQQMHEIRKALRGEAVVLMGKNTMVRRAIRGFLSELPEFE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN + + AR G+ A + V +P G ME
Sbjct: 75 KLLPFVKGNVGFIFTNGDLKTIRDTVVSNVVAAPARAGAIAPKDVWIPAG-----NTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V E+ + P A +L +L I T+ + ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVEQDAKVGPSEATLLNMLNISPFTYGMTVV 188
>gi|406864272|gb|EKD17318.1| 60S acidic ribosomal protein P0 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 313
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 88/193 (45%), Gaps = 27/193 (13%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAYKVSK---- 83
++ +E YKSI++ +N+ + + E R+ ++ ++ +G+ M R + ++V
Sbjct: 15 LKTLLEGYKSIFIVGVDNVSSQQMHEIRQSLRGEGVVLMGKNTMVRRALKGFQVDTPEYE 74
Query: 84 ----FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
F+ GN G TN + + + AR G+ A + V +P G ME
Sbjct: 75 RLLPFVKGNVGFVFTNGDLKTIRDKILANKVAAPARAGAVAPDDVYVPAG-----NTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLIC 195
P F + G+P ++ +G +E+ +D + E G + A +L +L I T+ + +
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEITTDLKLVEAGSKVGASEATLLNMLNISPFTYGMGI-- 187
Query: 196 RWSAEDFELYREG 208
F++Y +G
Sbjct: 188 ------FQVYDQG 194
>gi|300706387|ref|XP_002995464.1| hypothetical protein NCER_101630 [Nosema ceranae BRL01]
gi|239604580|gb|EEQ81793.1| hypothetical protein NCER_101630 [Nosema ceranae BRL01]
Length = 263
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 11/209 (5%)
Query: 15 TKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVG----- 69
T K+ K K+ + +Y S + S +N+ + + KE + PS G
Sbjct: 2 TVKESKVRKQNTYEKAKECFTSYNSFALVSMDNIVSNQLKEMKRAWGPSSTFLTGKNTAI 61
Query: 70 RYPMRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
R ++ + + GN L ++V+ + + +E A+ G A V + +
Sbjct: 62 RKALKELNREDLLDKVRGNISLIFFKEDVKKVKEVIDLFERESVAKVGDIAQSDVWI-KA 120
Query: 130 PLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATF 189
+ T E + + G+P ++ KG +E++ DF+V +G + P A +L L+ IK +
Sbjct: 121 HVTGMTSEKTGYFQTLGIPTKITKGKIEIMQDFLVLNDGDKVGPSQANLLALINIKPFKY 180
Query: 190 KLHLICRWSAEDFELYREGL---DESDVE 215
K+ + + E+ E Y L E+D++
Sbjct: 181 KMKIFSVY--ENGEFYDPSLIDVSENDIK 207
>gi|242069639|ref|XP_002450096.1| hypothetical protein SORBIDRAFT_05g000456 [Sorghum bicolor]
gi|241935939|gb|EES09084.1| hypothetical protein SORBIDRAFT_05g000456 [Sorghum bicolor]
Length = 77
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 15/71 (21%)
Query: 154 GVVELVSDFVVCEEGKPLSPESAR--------------ILRLLGIKMATFKLHLIC-RWS 198
GV ELV+D VVCEEG +A+ + RLLGI+M+ F L+L+C WS
Sbjct: 1 GVAELVADHVVCEEGTSFRHLAAQTRLFLFFDSTLISLLQRLLGIQMSKFCLYLVCPLWS 60
Query: 199 AEDFELYREGL 209
+DFE+Y++GL
Sbjct: 61 CDDFEVYKKGL 71
>gi|78190803|gb|ABB29723.1| ribosomal protein P0 large subunit [Monosiga brevicollis]
Length = 231
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 87 GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQG 146
GN GL TN + + ++ AR G+ A E + +P GP Q + F +
Sbjct: 46 GNVGLLFTNDDFVAIRDVLLDHKVAAPARVGAIAPEPIIIPAGPTGQDAQKTS-FFQALN 104
Query: 147 MPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
+P ++ KG +E++S+ + EEG + P A +L +LGI ++ L ++
Sbjct: 105 IPTKIAKGSIEIISEVRLLEEGGRVGPSEAALLNMLGISPFSYGLVVV 152
>gi|388579453|gb|EIM19776.1| ribosomal protein P0 [Wallemia sebi CBS 633.66]
Length = 312
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
+ KE N ++ VE Y SI++ + +N+ + + + R+ ++ + +G+ M
Sbjct: 5 RTEKEQYFNRLQELVETYPSIFIVNIDNVSSNQMHQIRQALRGKGQVLMGKNTMVRRALK 64
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
Q ++ + GN G T+ +++ + + AR G + E V +P G
Sbjct: 65 IFIQSNPQFERLLAHVKGNIGFVFTSGDLKDIRDIIVANKVKAPARAGLYSPEDVYIPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD V E + A +L +L I
Sbjct: 125 -----NTGMEPGKTSFFQALGVPTKIARGTIEIVSDIRVVEANTRVGASEATLLNMLNIS 179
Query: 186 MATFKLHLI 194
TF + +
Sbjct: 180 PFTFGMTCV 188
>gi|50303713|ref|XP_451800.1| 60S acidic ribosomal protein P0 [Kluyveromyces lactis NRRL Y-1140]
gi|49640932|emb|CAH02193.1| KLLA0B05918p [Kluyveromyces lactis]
Length = 311
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKS++V +N+ + + E R+ ++ ++ +G+ M R + +
Sbjct: 15 LREYLEEYKSVFVVGVDNVSSQQMHEVRKNLRGRAVVLMGKNTMVRRAVRGFISDFPDYE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN ++++ + + AR G+ A E + + ME
Sbjct: 75 KLLPFVKGNVGFIFTNDSLQDIKEVIIANKVAAPARAGAVAPEDIWVL-----AVNTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V + GK + A +L LL I T+ L ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGKRVGASEASLLNLLNISPFTYGLTVV 188
>gi|315113583|pdb|3O5H|M Chain M, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit
Of The Second 80s In The Asymmetric Unit.
gi|4371|emb|CAA30029.1| unnamed protein product [Saccharomyces cerevisiae]
gi|218396|dbj|BAA00415.1| acidic ribosomal protein A0 [Saccharomyces cerevisiae]
gi|22022642|emb|CAA31703.1| ribosomal protein A0 [Saccharomyces cerevisiae]
Length = 312
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKS++V +N+ + + E R++++ ++ +G+ M R + +
Sbjct: 15 LREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRGFLSDLPDFE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ G G TN P E++++ AR G+ A E + + ME
Sbjct: 75 KLLPFVKGYVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWV-----RAVNTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V + G + A +L LL I TF L ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFGLTVV 188
>gi|358391458|gb|EHK40862.1| hypothetical protein TRIATDRAFT_258952 [Trichoderma atroviride IMI
206040]
Length = 313
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY------ 79
+ ++ +++YKSI++ +N+ + + E R ++ ++ +G+ M R + +
Sbjct: 13 DKLKGLLQDYKSIFIVEIDNVSSQQMHEIRHALRGKGVVLMGKNTMVRRALRTFLIDTPE 72
Query: 80 --KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++ F+ GN G TN +E+ AR G+ A V +P G
Sbjct: 73 YERILPFVKGNVGFVFTNGDLKEIRDQILANRVAAPARAGAVAPVDVWVPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+ +D + E G + P A +L LL I T+ L +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEITTDLKLIEAGNKVGPSEASLLNLLNISPFTYGLGI 187
>gi|161899289|ref|XP_001712871.1| ribosomal protein L10 [Bigelowiella natans]
gi|75756365|gb|ABA27259.1| ribosomal protein L10 [Bigelowiella natans]
Length = 251
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 76/162 (46%), Gaps = 11/162 (6%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYP----------MRYSQAYKVSK 83
+ +Y ++ + + N+R+ + + R+ ++ + + VG+ + S+ V +
Sbjct: 16 LNSYDTMVIVNMNNIRSKQIHDIRKHLRGTSEIVVGKKSFLSYLLQNNKLEMSRWMSVKE 75
Query: 84 FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLR 143
+L N GL TN + + F +Y F G A + + +G ++ + PF +
Sbjct: 76 YLSDNIGLIFTNSNLKILNETFKQYFLTSFVNAGEIAQRNIIIKKG-IKNLSPSQTPFFQ 134
Query: 144 KQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
G+P R++K +E++ D ++ + + L+ +L+ L IK
Sbjct: 135 ALGIPTRISKSSIEIIEDILLVSKNQALNKSQEVLLKKLDIK 176
>gi|448083996|ref|XP_004195495.1| Piso0_004886 [Millerozyma farinosa CBS 7064]
gi|359376917|emb|CCE85300.1| Piso0_004886 [Millerozyma farinosa CBS 7064]
Length = 309
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKSI++ +N+ + + E R+ ++ + +G+ M R + +
Sbjct: 15 LRELLEEYKSIFIVGVDNVSSQQMHEIRKALRGEATVLMGKNTMVRRAIRGFLSELPEYE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN + + + AR G+ A + V +P G ME
Sbjct: 75 KLLPFVRGNVGFIFTNGDLKSIRDVVVSNVVAAPARAGAIAPKDVWIPAG-----NTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V E + P A +L +L I T+ + +I
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVETDTRVGPSEATLLNMLNISPFTYGMSVI 188
>gi|365986242|ref|XP_003669953.1| ribosomal protein P0 [Naumovozyma dairenensis CBS 421]
gi|343768722|emb|CCD24710.1| hypothetical protein NDAI_0D03960 [Naumovozyma dairenensis CBS 421]
Length = 312
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQAY 79
+R+ +E YKSI++ +N+ + + E R++++ ++ +G+ M S
Sbjct: 15 LRSYLEEYKSIFIVGVDNVSSQQMHEVRKELRGRGVVLMGKNTMVRTAIRGLIGESSDFE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGP-LEQFTHEM 138
K+ F+ GN G TN ++++ + + + A PE + M
Sbjct: 75 KLLPFIKGNVGFVFTNASLQDIKEVIIS------NKVAAPARAGAIAPEDIWVRAVNTGM 128
Query: 139 EP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
EP F + G+P ++ +G +E+VSD V + G+ + A +L LL I +F L ++
Sbjct: 129 EPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGQKVGQSEASLLNLLEISPFSFGLSIV 188
>gi|396471577|ref|XP_003838902.1| similar to 60s acidic ribosomal protein P0 [Leptosphaeria maculans
JN3]
gi|312215471|emb|CBX95423.1| similar to 60s acidic ribosomal protein P0 [Leptosphaeria maculans
JN3]
Length = 316
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 19/188 (10%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
KE K + + ++ YKSI++ + +N+ + + E R+ ++ ++ +G+ M
Sbjct: 5 KESKAIYFEKLEALLKEYKSIFIVTVDNVSSQQMHEIRQSLRGEGVVLMGKNTMVRRALK 64
Query: 74 ---RYSQAY-KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
S Y ++ F+ GN G TN +E+ AR G+ A V +P G
Sbjct: 65 GLINDSPEYERLLPFVKGNVGFVFTNSDLKEIRDKILANRVAAPARAGALAPGDVYVPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+ SD + E G + A +L LLGI
Sbjct: 125 -----NTGMEPGKTSFFQALGVPTKIARGTIEITSDLKLIEAGNKVGASEATLLNLLGIS 179
Query: 186 MATFKLHL 193
T+ + +
Sbjct: 180 PFTYGMGI 187
>gi|448079500|ref|XP_004194395.1| Piso0_004886 [Millerozyma farinosa CBS 7064]
gi|359375817|emb|CCE86399.1| Piso0_004886 [Millerozyma farinosa CBS 7064]
Length = 309
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKSI++ +N+ + + E R+ ++ + +G+ M R + +
Sbjct: 15 LRELLEEYKSIFIVGVDNVSSQQMHEIRKALRGEATVLMGKNTMVRRAIRGFLSELPEYE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN + + + AR G+ A + V +P G ME
Sbjct: 75 KLLPFVKGNVGFIFTNGDLKSIRDVVVSNVVAAPARAGAIAPKDVWIPAG-----NTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V E+ + P A +L +L I T+ + +I
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVEKDVRVGPSEATLLNMLNISPFTYGMSVI 188
>gi|367044004|ref|XP_003652382.1| 60S acidic ribosomal protein P0 [Thielavia terrestris NRRL 8126]
gi|346999644|gb|AEO66046.1| hypothetical protein THITE_2077551 [Thielavia terrestris NRRL 8126]
Length = 313
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY------ 79
+ ++ +E Y+SI+V S +N+ + + E R+ ++ ++ +G+ M R + +
Sbjct: 13 DKLKGLLEEYRSIFVVSVDNVSSQQMHEIRQSLRGQGVVLMGKNTMVRRALKTFIADTPE 72
Query: 80 --KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++ F+ GN G TN +EV + AR G+ A V +P G
Sbjct: 73 YERLLPFVKGNVGFVFTNADLKEVRDKILANKVAAPARAGAIAPVDVWVPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+ +D + E G + P A +L +L I T+ + +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGGKVGPSEATLLNMLNISPFTYGMGI 187
>gi|307110053|gb|EFN58290.1| hypothetical protein CHLNCDRAFT_59607 [Chlorella variabilis]
Length = 314
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 21/177 (11%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKP-SRLLWVGRYPMRYS-----------QAYKV 81
++ Y ++ +N+ + +F + R I+ SR+L MR S Q ++
Sbjct: 21 MDTYDRAFLVHADNVGSKQFMDIRAAIRDHSRILMGKNTMMRRSIRLYCERTGNDQWLQL 80
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP- 140
+ GN GL T EV L + ++ AR G A V +P G M+P
Sbjct: 81 LGHMVGNVGLIFTKGDLNEVRKLIDDFKVGAPARVGLVAPNDVTIPGG-----NTGMDPS 135
Query: 141 ---FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
F + +P ++NKG VE+ +D + + G + A +L LGIK ++ L ++
Sbjct: 136 QTSFFQVLNIPTKINKGSVEITADVHLIKTGDKVGASEATLLAKLGIKPFSYGLVIL 192
>gi|395332162|gb|EJF64541.1| 60S acidic ribosomal protein P0 [Dichomitus squalens LYAD-421 SS1]
Length = 311
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 20/210 (9%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
+ KE+ ++ V Y SI++ + +N+ + + + R ++ ++ +G+ M
Sbjct: 5 RAQKELYFQKLKELVAKYPSIFLVNVDNVGSNQMHQIRVALRGKGIVVMGKNTMVRRALR 64
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
Y Q ++ + GN G T+ +EV + + AR G+ A + V +P G
Sbjct: 65 SILGEYPQFERLLPHVKGNIGFVFTSGDLKEVRDIITANKVAAPARAGALAPKDVTIPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD V G + P A +L +L I
Sbjct: 125 -----NTGMEPGKTSFFQALGIPTKIARGTIEIVSDVQVVTAGTRVGPSEATLLNMLNIS 179
Query: 186 MATFKLHLICRWSAEDFELYREGLDESDVE 215
T+ + ++ + + E LD SD E
Sbjct: 180 PFTYGMTVVQIFDQGNI-FSPEVLDISDKE 208
>gi|116180696|ref|XP_001220197.1| 60S acidic ribosomal protein P0 [Chaetomium globosum CBS 148.51]
gi|88185273|gb|EAQ92741.1| 60S acidic ribosomal protein P0 [Chaetomium globosum CBS 148.51]
Length = 311
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 86/180 (47%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY------ 79
+ +++ +E Y SI++ S +N+ + + E R+ ++ + ++ +G+ M R + +
Sbjct: 13 DKLKSLLEEYASIFIVSVDNVSSQQMHEIRQSLRGNGVVLMGKNTMVRRALKTFLADSPE 72
Query: 80 --KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++ F+ GN G TN +E+ + AR G+ A V +P G
Sbjct: 73 YERLLPFVKGNIGFVFTNSDLKEIRDKILANKVAAPARAGAVAPSDVWIPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+ +D + E G + P A +L +L I T+ + +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGLKVGPSEATLLNMLNISPFTYGMGI 187
>gi|440793419|gb|ELR14603.1| ribosomal protein L10, putative [Acanthamoeba castellanii str.
Neff]
Length = 329
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-RYSQAYKVSK----- 83
+ N + +YK + + + N+ + + + R++++ +L +G+ M R ++K
Sbjct: 18 LSNLLVDYKKVLIVAANNVGSNQLQRVRQELRGKAVLLMGKNTMIRKCIRENLTKNPDLE 77
Query: 84 ----FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
++ GN G TN ++ + + A++G+ + V +P GP Q +
Sbjct: 78 ALLPYVKGNVGFVFTNGDLSDMRTRIGAVKVKAAAKSGAISPCDVIVPAGPTGQDPAKTS 137
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
F + + R++KGV+E+V+D + +EG ++ A +L++L I+ F+ L +
Sbjct: 138 -FFQALTISTRISKGVIEIVNDVHLVKEGAKVTASQAALLQMLNIQ--PFEYALAVKTVY 194
Query: 200 EDFELY 205
+D +Y
Sbjct: 195 DDGSVY 200
>gi|212223327|ref|YP_002306563.1| acidic ribosomal protein P0 [Thermococcus onnurineus NA1]
gi|229564304|sp|B6YSX9.1|RLA0_THEON RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|212008284|gb|ACJ15666.1| LSU ribosomal protein L10E [Thermococcus onnurineus NA1]
Length = 339
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 14/191 (7%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------RYSQAY- 79
V + N +++Y I + N+ + RE+++ LL V R + R +Q
Sbjct: 12 VEELTNIIKSYPVIALVDVANVPAYPLSKMREKLRGKALLRVSRNTLIELAIKRAAQELG 71
Query: 80 -----KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQF 134
K+ + G G+ T M ++ L + + A+ G V +P GP
Sbjct: 72 KPELEKLIDHIQGGAGILATEMNPFKLYKLLEESKTPAPAKPGVPVPRDVVIPAGPTSIS 131
Query: 135 THEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
+ ++ G+P R+ KG V + D+ V + G+ ++ + ARIL LGI+ L+L+
Sbjct: 132 PGPLVGEMQALGIPARIEKGKVSIQKDYTVLKAGEVITEQLARILNALGIEPLEVGLNLL 191
Query: 195 CRWSAEDFELY 205
+ ED +Y
Sbjct: 192 AAY--EDGIVY 200
>gi|310790829|gb|EFQ26362.1| ribosomal protein L10 [Glomerella graminicola M1.001]
Length = 313
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 85/180 (47%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY------ 79
+ ++ +E YKSI++ + +N+ + + E R+ ++ ++ +G+ M R + +
Sbjct: 13 DKLKGLLEEYKSIFIVTVDNVSSQQMHEIRQSLRGQGVVLMGKNTMVRRALKTFIPDSPE 72
Query: 80 --KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++ F+ GN G TN +++ + AR G+ A V +P G
Sbjct: 73 YERLLPFVKGNVGFVFTNGDLKDIRDKILANKVAAPARAGAVAPSDVWIPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+VSD + E + P A +L +L I T+ + +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEIVSDLKLVEANSKVGPSEATLLNMLNISPFTYGMGI 187
>gi|429856188|gb|ELA31112.1| 60s acidic ribosomal protein p0 [Colletotrichum gloeosporioides
Nara gc5]
Length = 339
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY------ 79
+ ++ +E YKSI++ S +N+ + + E R+ ++ ++ +G+ M R + +
Sbjct: 13 DKLKGLLEEYKSIFIVSVDNVSSQQMHEIRQSLRGEGVVLMGKNTMVRRALKTFIPDAPE 72
Query: 80 --KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++ F+ GN G TN +++ + AR G+ A V +P G
Sbjct: 73 YERLLPFVKGNVGFVFTNGDLKDIRDKILANKVAAPARAGAVAPSDVWIPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+VSD + E + P A +L +L I T+ + +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEIVSDLKLVEANTKVGPSEATLLNMLNISPFTYGMGV 187
>gi|401837921|gb|EJT41766.1| MRT4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 170
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 13/135 (9%)
Query: 79 YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQ----- 133
+++SK G TGL T+ V+ F Y D++R + A +PEG +
Sbjct: 24 FQLSKLCSGVTGLLFTDEDVNTVKEYFQTYVRSDYSRPNTKAPLTFTIPEGIVYSRGGQI 83
Query: 134 -------FTHEMEPFLRKQ-GMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
H +EP +R + +P + G + + S ++VC EG+ L A IL+ GI
Sbjct: 84 SVEEDVPMIHSLEPTMRNKFEIPTSIKAGKITIDSPYLVCTEGEKLDVRQALILKQFGIA 143
Query: 186 MATFKLHLICRWSAE 200
+ FK+ + + +
Sbjct: 144 ASEFKVKVSAYYDND 158
>gi|126136945|ref|XP_001384996.1| 60S acidic ribosomal protein P0 [Scheffersomyces stipitis CBS 6054]
gi|126092218|gb|ABN66967.1| ribosomal protein P0 (A0) (L10E) [Scheffersomyces stipitis CBS
6054]
Length = 312
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKSI+V +N+ + + E R+ ++ + +G+ M R + +
Sbjct: 15 LRELLEEYKSIFVVGVDNVSSQQMHEIRKALRGDATVLMGKNTMVRRAIRGFLSDLPEFE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ ++ GN G TN + + AR G+ A + V +P G ME
Sbjct: 75 KLLPYVKGNVGFIFTNADLKTIRDEIVSNVVAAPARAGAVAPKDVWIPAG-----NTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V E + P A +L +L I T+ + ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVEAENKVGPSEATLLNMLNISPFTYGMTVV 188
>gi|367019862|ref|XP_003659216.1| hypothetical protein MYCTH_2295945 [Myceliophthora thermophila ATCC
42464]
gi|347006483|gb|AEO53971.1| hypothetical protein MYCTH_2295945 [Myceliophthora thermophila ATCC
42464]
Length = 311
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY------ 79
+ ++ +E Y SI++ S +N+ + + E R+ ++ + ++ +G+ M R + +
Sbjct: 13 DKLKGLLEEYHSIFIVSVDNVSSQQMHEIRQALRGTGVVLMGKNTMVRRALKTFIADAPE 72
Query: 80 --KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++ F+ GN G TN +EV + AR G+ A V +P G
Sbjct: 73 YERLLPFVKGNIGFVFTNGDLKEVRDKILANKVAAPARAGAIAPVDVWVPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+ SD + E G + P A +L +L I T+ + +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEITSDLKLVEAGAKVGPSEATLLNMLNISPFTYGMGI 187
>gi|367013154|ref|XP_003681077.1| 60S acidic ribosomal protein P0 [Torulaspora delbrueckii]
gi|359748737|emb|CCE91866.1| hypothetical protein TDEL_0D02820 [Torulaspora delbrueckii]
Length = 312
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 19/184 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKSI++ +N+ + + + R+ ++ ++ +G+ M R + +
Sbjct: 15 LREYLEEYKSIFIVGVDNVASQQMHQVRKALRGRGVVLMGKNTMVRRAIRGFVSELPDYE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN ++++ + + + AR G+ A E + + ME
Sbjct: 75 KLLPFVKGNVGFVFTNESLKDIKEVIIENKVAAPARAGAVAPEDIWVT-----AMNTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLIC 195
P F + G+P ++ +G +E+VSD V E G + A +L LL I T+ L ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVEAGNRVGQSEASLLNLLNISPFTYGLKIVQ 189
Query: 196 RWSA 199
+ A
Sbjct: 190 VYDA 193
>gi|358377962|gb|EHK15645.1| hypothetical protein TRIVIDRAFT_92231 [Trichoderma virens Gv29-8]
Length = 314
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY------ 79
+ ++ +E YKSI++ +N+ + + E R ++ ++ +G+ M R + +
Sbjct: 13 DKLKGLLEEYKSIFIVEIDNVSSQQMHEIRHSLRGKGVVLMGKNTMVRRALRTFVIDTPE 72
Query: 80 --KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++ F+ GN G TN +EV AR G+ A V +P G
Sbjct: 73 YERILPFVKGNVGFVFTNGDLKEVRDQLLANRVAAPARAGAVAPVDVWVPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+ +D + + G + P A +L LL I T+ + +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEITTDLKLIDAGNKVGPSEASLLNLLNISPFTYGMGI 187
>gi|401624522|gb|EJS42578.1| rpp0p [Saccharomyces arboricola H-6]
Length = 312
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKS++V +N+ + + E R++++ ++ +G+ M R + +
Sbjct: 15 LREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRGFLSDLPDYE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGP-LEQFTHEM 138
K+ F+ GN G TN E++++ R + A PE + M
Sbjct: 75 KLLPFVKGNVGFVFTNETLSEIKNVIVS------NRVAAPARAGAIAPEDIWVTAVNTGM 128
Query: 139 EP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
EP F + G+P ++ +G +E+VSD V + G + + +L LL I TF L ++
Sbjct: 129 EPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGHKVGQSESALLNLLNISPFTFGLTVV 188
>gi|374326921|ref|YP_005085121.1| 50S ribosomal protein L10 [Pyrobaculum sp. 1860]
gi|356642190|gb|AET32869.1| ribosomal protein L10 [Pyrobaculum sp. 1860]
Length = 344
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 6 RDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRL 65
R RP SK + IVN + Y +++F + + E+R +++P
Sbjct: 11 RSRPYPQSKVR---------IVNEAVELLRKYPYVFLFDLHGLSSRVLNEYRYRLRPYGA 61
Query: 66 LWVGRYPMRYSQAY---------KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART 116
+ V + P + A+ +V++ + G G F T + EV + + A+
Sbjct: 62 VKVIK-PTLFKIAFAKVFGGVPAEVAERVRGEVGFFFTEVNPAEVIKIVAENSVRRAAQP 120
Query: 117 GSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESA 176
G A + +P GP + K +P R+ +G + + D VV + G+ ++PE A
Sbjct: 121 GDKAPFDIVVPAGPTNASPGPIISKFGKLKIPTRVQEGKIWIAKDTVVAKAGQEITPEMA 180
Query: 177 RILRLLGIKMATFKLHLI-CRWSAEDF 202
+LR++GI+ +L L+ W + +
Sbjct: 181 EVLRVVGIEPIFEQLRLLGVIWRGQRY 207
>gi|449540331|gb|EMD31324.1| hypothetical protein CERSUDRAFT_100519 [Ceriporiopsis subvermispora
B]
Length = 313
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
+ KE+ ++ V Y SI+V + +N+ + + + R ++ ++ +G+ M
Sbjct: 5 RAQKELYFVKLKELVAKYPSIFVVNVDNVGSNQMHQIRVALRAKGVVVMGKNTMVRRALR 64
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
Y Q K+ + GN G T+ +E+ + + AR G+ A + V +P G
Sbjct: 65 SILTEYPQFEKLLPHVRGNIGFVFTSGDLKEIRDIITANKVAAPARAGALAPKDVTIPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD V G + P A +L +L I
Sbjct: 125 -----NTGMEPGKTSFFQALGIPTKIARGTIEIVSDVKVVTAGLRVGPSEATLLNMLNIS 179
Query: 186 MATFKLHLI 194
T+ + ++
Sbjct: 180 PFTYGMTVV 188
>gi|302306842|ref|NP_983226.2| 60S acidic ribosomal protein P0 [Ashbya gossypii ATCC 10895]
gi|299788713|gb|AAS51050.2| ACL178Cp [Ashbya gossypii ATCC 10895]
gi|374106431|gb|AEY95340.1| FACL178Cp [Ashbya gossypii FDAG1]
Length = 309
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E YKS++V +N+ + + E R+ ++ ++ +G+ M R + +
Sbjct: 15 LREYLEEYKSVFVVGVDNVSSQQMHEVRKALRGKAVVLMGKNTMVRRAIRGFIADFPDYE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN P +++ + + AR G+ A E + + ME
Sbjct: 75 KLLPFVKGNVGFVFTNEPLTDIKEVIVANKVAAPARAGAVAPEDIWVL-----AVNTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+ SD V E G + A +L LL I T+ L ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEITSDVKVVEAGNRVGASEASLLNLLNISPFTYGLTVV 188
>gi|18978365|ref|NP_579722.1| acidic ribosomal protein P0 [Pyrococcus furiosus DSM 3638]
gi|397652361|ref|YP_006492942.1| acidic ribosomal protein P0 [Pyrococcus furiosus COM1]
gi|22257022|sp|Q8TZJ8.1|RLA0_PYRFU RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|428697980|pdb|3J21|KK Chain k, Promiscuous Behavior Of Proteins In Archaeal Ribosomes
Revealed By Cryo-em: Implications For Evolution Of
Eukaryotic Ribosomes (50s Ribosomal Proteins)
gi|18894199|gb|AAL82117.1| LSU ribosomal protein L10E [Pyrococcus furiosus DSM 3638]
gi|393189952|gb|AFN04650.1| acidic ribosomal protein P0 [Pyrococcus furiosus COM1]
Length = 339
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 18/203 (8%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSR-LLWVGRYPMRYSQAYKVSK-- 83
V + N +++Y + + +M + R I+ + LL V R + KV++
Sbjct: 12 VEELANLIKSYPVVALVDVSSMPAYPLSQMRRLIRENNGLLRVSRNTLIELAIKKVAQEL 71
Query: 84 ----------FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQ 133
++ G G+ +T M ++ + A+ G+ + V +P GP
Sbjct: 72 GKPELEKLINYIEGGAGILVTTMNPFKLYKFLQQNRQPAPAKPGAKVPKDVVIPAGPTSL 131
Query: 134 FTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
+ ++ G+P R+ +G V + D VV + G+ ++PE A IL LGI+ L L
Sbjct: 132 APGPIVGQMQAMGIPARIERGKVTIQKDTVVLKAGEEITPELANILNALGIQPLEVGLDL 191
Query: 194 ICRWSAEDFELYRE---GLDESD 213
+ + ED +Y +DES+
Sbjct: 192 LAVY--EDGIIYTPDVLAIDESE 212
>gi|356539947|ref|XP_003538454.1| PREDICTED: 60S acidic ribosomal protein P0-like [Glycine max]
Length = 320
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRY------------SQAYKV 81
++NY I V + +N+ + + + R ++ ++ +G+ M + +
Sbjct: 22 LDNYTQILVVAADNVGSNQLQNIRHGLRGDSVILMGKNTMMKRSIKIHAQNTGDTTILNL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV+ + +KY+ AR G A V +P G F
Sbjct: 82 IPLLVGNVGLIFTKGDVKEVKEVVSKYKVAAPARVGLVAPIDVIVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG VE+V+ + +G + A +L L I+ ++ L ++ +
Sbjct: 141 FQVLNIPTKINKGTVEIVTPVELIMKGDKVGSSEAVLLSKLAIRPFSYGLAVVSVY 196
>gi|255087320|ref|XP_002505583.1| predicted protein [Micromonas sp. RCC299]
gi|226520853|gb|ACO66841.1| predicted protein [Micromonas sp. RCC299]
Length = 313
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 80/174 (45%), Gaps = 21/174 (12%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------RYSQA------YKV 81
++N+ ++ +N+ + +F + R ++P + +G+ M Y + +
Sbjct: 21 LDNHTRAFIVGADNVGSRQFMDIRAALRPQSTVLMGKNTMIRKCIREYCERKGDDTWMAL 80
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP- 140
++ + GN G+ T +V+ ++ A+ G+ A V +P GP MEP
Sbjct: 81 AEKMIGNVGVIFTTGEMGDVKEKIKEFVVPAPAKAGAVAQVDVTVPAGP-----TGMEPS 135
Query: 141 ---FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
F + + ++NKG +E++SD V + G+ ++ +A +L LG T+ L
Sbjct: 136 QTNFFQTLNIATKINKGAIEILSDVTVVKAGEKVTSSAATLLGKLGFTPFTYGL 189
>gi|389851504|ref|YP_006353738.1| 50S ribosomal protein L10 [Pyrococcus sp. ST04]
gi|388248810|gb|AFK21663.1| rplJ, large subunit ribosomal protein L10 [Pyrococcus sp. ST04]
Length = 341
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 15/192 (7%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSR-LLWVGRYPM------RYSQAY 79
V + N +++Y I + +M + R IK + LL V R + + +Q
Sbjct: 12 VEELANLIKSYPVIALVDVSSMPAYPLSQMRRLIKENGGLLRVSRNTLIELAIKKAAQEL 71
Query: 80 ------KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQ 133
K+ ++ G G+ +T M ++ + A+ G+ + V +P GP
Sbjct: 72 GKPELEKLIDYIQGGAGILVTTMNPFKLYKFLQQNRQPAPAKAGAKVPKDVVIPAGPTPL 131
Query: 134 FTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
+ ++ G+P R+ +G V + D VV + G+ ++PE A IL LGI+ L L
Sbjct: 132 TPGPLVGQMQAMGIPARIERGKVTIQKDTVVLKAGEEITPELATILNALGIQPLEVGLDL 191
Query: 194 ICRWSAEDFELY 205
+ + ED +Y
Sbjct: 192 LAAY--EDGIVY 201
>gi|164654992|ref|XP_001728628.1| hypothetical protein MGL_4227 [Malassezia globosa CBS 7966]
gi|159102509|gb|EDP41414.1| hypothetical protein MGL_4227 [Malassezia globosa CBS 7966]
Length = 314
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 19/175 (10%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-RYSQAYKVSK--------- 83
++ SI+V + +N+ + + + R+ ++ + +G+ M R + +S+
Sbjct: 19 IDTNTSIFVVNVDNVSSQQMHQIRQALRGQATVLMGKNTMVRRALRQVISERPEFERLMP 78
Query: 84 FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP--- 140
+ GN G T+ +EV + AR G+ + + +P G MEP
Sbjct: 79 HVRGNVGFVFTSADLKEVRDKVIENRVAAPARAGAYSPVDIFVPAG-----NTGMEPGKT 133
Query: 141 -FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
F + G+P ++ +G +E+VSD V E G +SP + +L LL I T+ + ++
Sbjct: 134 SFFQALGVPTKIARGTIEIVSDVKVVEAGNRVSPSESALLNLLNISPFTYGMTVV 188
>gi|154339906|ref|XP_001565910.1| putative 60S acidic ribosomal subunit protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134063228|emb|CAM45430.1| putative 60S acidic ribosomal subunit protein [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 323
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 90/201 (44%), Gaps = 32/201 (15%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
+E++E +V+ + Y + +N+R+ + + R ++ +G+ +
Sbjct: 9 REYEEHLVDCLTK----YSCVLFVGMDNVRSQQVHDVRRALRGKAEFVMGKKTLQAKIVE 64
Query: 74 RYSQAYKVS-------------KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTA 120
+Y+QA S L GNTGL TN +E++++ + + AR G+ A
Sbjct: 65 KYAQAKNASPGAKHFSEQCEEHNLLSGNTGLIFTNDNVQEIKAVLDSHRVKAPARVGAIA 124
Query: 121 TEKVELPEGPLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESA 176
V +P G + MEP F + + ++ KG+VE+V++ V G + +A
Sbjct: 125 PCDVVVPAG-----STGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSTGDKVDNSTA 179
Query: 177 RILRLLGIKMATFKLHLICRW 197
+L+ L I +++ ++ W
Sbjct: 180 TLLQKLNISPFYYQVDVLSVW 200
>gi|340519991|gb|EGR50228.1| 60S acidic ribosomal protein P0 [Trichoderma reesei QM6a]
Length = 369
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 82/180 (45%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAYKVSK-- 83
+ ++ +++YKSI++ +N+ + + E R ++ ++ +G+ M R + + V
Sbjct: 13 DKLKGLLQDYKSIFIVEIDNVSSQQMHEIRHSLRGKGVVLMGKNTMVRRALRTFLVDTPE 72
Query: 84 ------FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
F+ GN G TN +E+ AR G+ A V +P G
Sbjct: 73 YERILPFVKGNVGFVFTNGDLKEIRDQLLANRVAAPARAGAVAPVDVWVPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+ +D + + G + P A +L LL I T+ + +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEITTDLKLIDAGNKVGPSEASLLNLLNISPFTYGMGI 187
>gi|57641351|ref|YP_183829.1| acidic ribosomal protein P0 [Thermococcus kodakarensis KOD1]
gi|73917556|sp|Q5JH36.1|RLA0_PYRKO RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|57159675|dbj|BAD85605.1| LSU ribosomal protein L10E [Thermococcus kodakarensis KOD1]
Length = 340
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------RYSQAY- 79
V + N +++Y I + + + R++++ LL V R + R +Q
Sbjct: 12 VEELANIIKSYPVIALVDVAGVPAYPLSKMRDKLRGKALLRVSRNTLIELAIKRAAQELG 71
Query: 80 -----KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQF 134
K+ + G + T M ++ L + + A+ G+ + V +P GP
Sbjct: 72 QPELEKLIDHIQGGAAILATEMNPFKLYKLLEESKTPAPAKAGAVVPKDVVIPAGPTSLA 131
Query: 135 THEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
+ ++ G+P R+ KG V + D+ V + G+ ++ + ARIL LGI+ L+L+
Sbjct: 132 PGPLVGEMQALGIPARIEKGKVSIQKDYTVLKAGEVITEQLARILNALGIEPLEVGLNLL 191
Query: 195 CRWSAEDFELYRE---GLDESD 213
+ ED +Y +DES+
Sbjct: 192 AAY--EDGIVYTPDVLAIDESE 211
>gi|346322633|gb|EGX92232.1| 60S acidic ribosomal protein P0 [Cordyceps militaris CM01]
Length = 331
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY------ 79
+ ++ +E YKSI++ +N+ + + E R ++ ++ +G+ M R + +
Sbjct: 13 DKLKGLLEEYKSIFIVEIDNVTSQQMHEIRHSLRGKAVVLMGKNTMVRRALKGFISDTPE 72
Query: 80 --KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++ F+ GN G TN +E+ L AR G+ A V +P G
Sbjct: 73 YERLLPFVKGNVGFVFTNEDLKEIRDLVLANRVAAPARAGAVAPLDVWVPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
MEP F + +P ++ +G +E+ +D + E+G + P A +L +L I TF +
Sbjct: 128 MEPGKTSFFQALNVPTKIARGTIEITTDLKLIEKGLKVGPSEATLLNMLNISPFTFGM 185
>gi|332158456|ref|YP_004423735.1| acidic ribosomal protein P0 [Pyrococcus sp. NA2]
gi|331033919|gb|AEC51731.1| acidic ribosomal protein P0 [Pyrococcus sp. NA2]
Length = 342
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K++ ++ G G+ +TNM ++ + A+ G+ + V +P GP +
Sbjct: 78 KLADYINGGAGILVTNMNPFKLYKFLEQNRQPAPAKPGAVVPKDVVIPAGPTPLTPGPIV 137
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
++ G+P R+ KG V + D V + G+ ++PE A IL LGI+ L ++ +
Sbjct: 138 GQMQAMGIPARIEKGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVY-- 195
Query: 200 EDFELY 205
ED +Y
Sbjct: 196 EDGIIY 201
>gi|19075893|ref|NP_588393.1| 60S acidic ribosomal protein P0 [Schizosaccharomyces pombe 972h-]
gi|41688607|sp|O74864.1|RLA0_SCHPO RecName: Full=60S acidic ribosomal protein P0
gi|3766376|emb|CAA21428.1| 60S acidic ribosomal protein Rpp0 (predicted) [Schizosaccharomyces
pombe]
Length = 312
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 82/192 (42%), Gaps = 19/192 (9%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
KE K +R+ E Y S++V + +N+ + + R+Q++ + L +G+ M
Sbjct: 5 KESKAQYFEKLRSLFEKYNSLFVVNIDNVSSQQMHTVRKQLRGTAELIMGKNTMIRRAMR 64
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
+ ++ + GN G TN +EV AR + A V +P G
Sbjct: 65 GIINDMPELERLLPVVRGNVGFVFTNADLKEVRETIIANVIAAPARPNAIAPLDVFVPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+ SD + + + P A +L +L I
Sbjct: 125 -----NTGMEPGKTSFFQALGIPTKITRGTIEITSDVHLVSKDAKVGPSEATLLNMLNIS 179
Query: 186 MATFKLHLICRW 197
T+ + ++ +
Sbjct: 180 PFTYGMDVLTIY 191
>gi|408388341|gb|EKJ68027.1| hypothetical protein FPSE_11838 [Fusarium pseudograminearum CS3096]
Length = 311
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 19 GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYS 76
K +K + + ++ +E Y SI++ +N+ + + E R ++ ++ +G+ M R
Sbjct: 3 AKSNKSLYFDKLKGLLEKYTSIFIVEIDNVSSQQMHEIRHALRSKGVVLMGKNTMVRRAL 62
Query: 77 QAY--------KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE 128
+ + ++ + GN G TN +EV + + AR G+ A V +P
Sbjct: 63 KTFVTDSPEYERLLPHVKGNVGFVFTNEDLKEVRDVILANKVAAPARAGALAPADVWVPA 122
Query: 129 GPLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
G MEP F + G+P ++ +G +E+ +D + E G + P A +L +L I
Sbjct: 123 G-----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGSKVGPSEATLLNMLNI 177
Query: 185 KMATFKLHL 193
T+ + +
Sbjct: 178 SPFTYGMGI 186
>gi|390337310|ref|XP_003724527.1| PREDICTED: uncharacterized protein LOC100893395 [Strongylocentrotus
purpuratus]
Length = 138
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 151 LNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS----------AE 200
L +G++ L S+ VC+ G L+PE ARIL+L MA FKL L WS A
Sbjct: 62 LGQGIIHLTSEHTVCKVGDTLTPEQARILKLFAKPMAEFKLKLAASWSNNGAFEVFDDAP 121
Query: 201 DFELYREGLDESDVE 215
D + +G D+ DVE
Sbjct: 122 DSKSRSDGDDDEDVE 136
>gi|409096636|ref|ZP_11216660.1| acidic ribosomal protein P0 [Thermococcus zilligii AN1]
Length = 339
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 88/187 (47%), Gaps = 10/187 (5%)
Query: 33 AVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAY------KVSKFLC 86
A+ + + + MR+ KF+ + I+ SR +G R +Q K++ ++
Sbjct: 26 ALVDVAGVPAYPLSKMRD-KFRG-KAIIRVSRNTLIGIAIKRAAQELGKPELAKLADYIQ 83
Query: 87 GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQG 146
G + T++ ++ L + + A+ G+ T+ V +P GP + ++ G
Sbjct: 84 GGAAILATDINPFKLYKLLEESKIPAPAKPGAVVTKDVVIPGGPTPIAPGPLVGEMQALG 143
Query: 147 MPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYR 206
+P R+ KG V + +D+ V + G ++ + ARIL LGI+ L+L+ + ED +Y
Sbjct: 144 IPARIEKGKVTIQNDYPVLKAGGVITEQLARILNALGIEPLEVGLNLLAVY--EDGIVYT 201
Query: 207 EGLDESD 213
G+ D
Sbjct: 202 PGVLAID 208
>gi|342319935|gb|EGU11880.1| 60S acidic ribosomal protein P0 [Rhodotorula glutinis ATCC 204091]
Length = 347
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 18 KGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMR--- 74
+ ++ K+ +++ +E Y SI+V + +N+ + + + R+ ++ + +G+ M
Sbjct: 3 RSRDEKQAYFAKLKDYIETYPSIFVVNVDNVGSNQMHQIRQAVRGKGTILMGKNTMVRRA 62
Query: 75 ----YSQAYKVSKFLC---GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELP 127
+ +FL GN G T+ +E+ + + A+ G+ A + +P
Sbjct: 63 IRLILADHPDFERFLPLVKGNVGFVFTSADLKEIRDVIVSNKVAAPAKAGAFAPNDIYVP 122
Query: 128 EGPLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLG 183
G MEP F + +P ++ +G +E+VSD + G + A +L +LG
Sbjct: 123 AG-----NTGMEPGKTSFFQALNIPTKIARGTIEIVSDVHLVVAGARVDASQATLLNMLG 177
Query: 184 IKMATFKLHLICRWSAEDFELYREG-LDESDVE 215
I T+ + +I +S D +L+ E LD SD E
Sbjct: 178 ISPFTYGMKIIQIFS--DGQLFPESVLDVSDDE 208
>gi|242205902|ref|XP_002468808.1| 60S acidic ribosomal protein P0 [Postia placenta Mad-698-R]
gi|220732193|gb|EED86031.1| 60S acidic ribosomal protein P0 [Postia placenta Mad-698-R]
Length = 315
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
+ KE+ +++ V Y SI+V + +N+ + + + R ++ ++ +G+ M
Sbjct: 5 RAQKELYFAKLKDLVAKYPSIFVVNVDNVGSNQMHQIRVALRGKGIVVMGKNTMVRRALR 64
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
Y Q ++ + GN G T+ +E+ + + AR G+ A + V +P G
Sbjct: 65 SILSEYPQFERLLPHVRGNIGFVFTSGDLKEIRDIITANKVAAPARAGALAPKDVFIPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD V G + P A +L +L I
Sbjct: 125 -----NTGMEPGKTSFFQALGIPTKIARGTIEIVSDVQVVFAGTRVGPSEATLLNMLNIS 179
Query: 186 MATFKLHLI 194
T+ + ++
Sbjct: 180 PFTYGMTVV 188
>gi|444730936|gb|ELW71305.1| Casein kinase I isoform gamma-1 [Tupaia chinensis]
Length = 491
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEF 56
MPKSKRD V+L+KT KKG E K+ ++ + V+ K +++FS NMRN K K+
Sbjct: 1 MPKSKRDNKVSLTKTAKKGLELKQNLIEELWKCVDTSKYLFIFSMANMRNSKLKDI 56
Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 164 VCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAED--FELYRE 207
VC+EG L+PE A++L+L G +MA FK+ + W A+ F+ +RE
Sbjct: 72 VCKEGDVLTPEQAQVLKLFGYEMAKFKVTMKYMWDAQSGRFQQWRE 117
>gi|366986769|ref|XP_003673151.1| hypothetical protein NCAS_0A02020 [Naumovozyma castellii CBS 4309]
gi|342299014|emb|CCC66760.1| hypothetical protein NCAS_0A02020 [Naumovozyma castellii CBS 4309]
Length = 313
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R +E Y+SI++ +N+ + + E R++++ ++ +G+ M R + +
Sbjct: 15 LREYLEEYRSIFIVGVDNVSSQQMHEVRKELRGRGVVLMGKNTMVRRAIRDFITDLPDYE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGP-LEQFTHEM 138
KV F+ GN G TN +E++ + + + A PE + M
Sbjct: 75 KVLPFIKGNVGFVFTNSSLQEIKEVIIS------NKVAAPARAGAIAPEDIWVRAVNTGM 128
Query: 139 EP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
EP F + G+P ++ +G +E+VSD V + G + A +L LL I F L ++
Sbjct: 129 EPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGHKVGQSEASLLNLLEISPFKFGLSIV 188
>gi|320586869|gb|EFW99532.1| 60S acidic ribosomal protein p0 [Grosmannia clavigera kw1407]
Length = 312
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAYKVSK---- 83
++ +E Y+SI++ S +N+ + + E R+ ++ ++ +G+ M R + + +
Sbjct: 15 LKGLLEEYQSIFIVSVDNVSSQQMHEIRQSLRGQGVVLMGKNTMVRRALRTFVIDSPEYE 74
Query: 84 ----FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
F+ GN G TN +EV + AR G+ A V +P G ME
Sbjct: 75 RLLPFVKGNVGFVFTNADLKEVRDKILSNKVAAPARAGAVAPVDVWVPAG-----NTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
P F + G+P ++ +G +E+ +D + E G + A +L +L I T+ + +
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEITTDLKLVESGLKVGASEATLLNMLNISPFTYGMGI 187
>gi|46124899|ref|XP_387003.1| RLA0_NEUCR 60S acidic ribosomal protein P0 [Gibberella zeae PH-1]
Length = 311
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 19 GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYS 76
K +K + + ++ +E Y SI++ +N+ + + E R ++ ++ +G+ M R
Sbjct: 3 AKSNKSLYFDKLKGLLEKYTSIFIVEIDNVSSQQMHEIRHALRNKGVVLMGKNTMVRRAL 62
Query: 77 QAY--------KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE 128
+ + ++ + GN G TN +EV + + AR G+ A V +P
Sbjct: 63 KTFVADSPEYERLLPHVKGNVGFVFTNEDLKEVRDVILANKVAAPARAGALAPADVWVPA 122
Query: 129 GPLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
G MEP F + G+P ++ +G +E+ +D + E G + P A +L +L I
Sbjct: 123 G-----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGSKVGPSEATLLNMLNI 177
Query: 185 KMATFKLHL 193
T+ + +
Sbjct: 178 SPFTYGMGI 186
>gi|254577829|ref|XP_002494901.1| 60S acidic ribosomal protein P0 [Zygosaccharomyces rouxii]
gi|238937790|emb|CAR25968.1| ZYRO0A12452p [Zygosaccharomyces rouxii]
Length = 310
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 21/177 (11%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQAY 79
+R +E YKSI+V +N+ + + + R ++ ++ +G+ M Q
Sbjct: 15 LREYLEEYKSIFVVGVDNVSSQQMHQVRRALRGRGVILMGKNTMVRRAVRGFLSELPQYE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGP-LEQFTHEM 138
K+ F+ GN G TN +SL + E + + A P + M
Sbjct: 75 KLLPFVKGNVGFVFTN------DSLKDIKEVIVANKVAAPARAGAIAPGDIWVTAMNTGM 128
Query: 139 EP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
EP F + G+P ++ +G +E+ SD V E G + P A +L LL I TF L
Sbjct: 129 EPGKTSFFQALGVPTKIARGTIEISSDVKVVEAGNRVGPSEAALLNLLNISPFTFGL 185
>gi|83316026|ref|XP_731047.1| ribosomal protein L10 [Plasmodium yoelii yoelii 17XNL]
gi|23490962|gb|EAA22612.1| Ribosomal protein L10, putative [Plasmodium yoelii yoelii]
Length = 224
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 63/123 (51%)
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+S+ L GN L +T +V FN+++ ++ G+ + E V L G + M+
Sbjct: 96 KISELLVGNRILLITKDEPLKVIKFFNEFQPEEYIIHGNISKENVILKCGDVLNVPVSMQ 155
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
L+K + + + + D V+ E+ K +S ESA++LR+L +K+ F + ++ W
Sbjct: 156 KDLQKLKVNFDIVDQKIIIKEDKVLAEKDKLVSLESAKLLRMLNMKIGKFDISVLAYWHL 215
Query: 200 EDF 202
+F
Sbjct: 216 NNF 218
>gi|156837550|ref|XP_001642798.1| hypothetical protein Kpol_385p9 [Vanderwaltozyma polyspora DSM
70294]
gi|156113367|gb|EDO14940.1| hypothetical protein Kpol_385p9 [Vanderwaltozyma polyspora DSM
70294]
Length = 311
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQAY 79
+R E YKS++V +N+ + + + R+ ++ ++ +G+ M
Sbjct: 15 LREYFEEYKSLFVVGVDNVSSQQMHQVRKALRGRGVVLMGKNTMVRRAIRGLVTELPDLE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN +++ + + AR G+ A E + + ME
Sbjct: 75 KLLPFVKGNVGFIFTNESLRDIKEVIVANKVAAPARAGAVAPEDIWV-----RAVNTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V + G + P A +L LL I T+ L ++
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGPSEASLLNLLNISPFTYGLTVV 188
>gi|440634718|gb|ELR04637.1| 60S acidic ribosomal protein P0 [Geomyces destructans 20631-21]
Length = 312
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 85/180 (47%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY------ 79
+ ++ +E Y+SI++ S +N+ + + E R+ ++ ++ +G+ M R + +
Sbjct: 13 DKLKGLLEEYRSIFIVSVDNVSSQQMHEIRQSLRGEGVVLMGKNTMVRRAIKGFVGDSPE 72
Query: 80 --KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++ F+ GN G TN +++ + AR G+ A + V +P G
Sbjct: 73 WERLLPFVKGNIGFVFTNSDLKDIRDKILANKVAAPARAGAVAPDDVFVPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+ +D + E G + A +L +L I T+ + +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEITADLKLVEAGTKVGASEATLLNMLNISPFTYGMGI 187
>gi|154297648|ref|XP_001549250.1| 60S acidic ribosomal protein P0 [Botryotinia fuckeliana B05.10]
Length = 312
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 87/193 (45%), Gaps = 19/193 (9%)
Query: 21 EHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQA 78
E+K + ++ +E YKSI++ + +N+ + + E R ++ ++ +G+ M R +
Sbjct: 6 ENKAGYFDKLKGLLEEYKSIFIVTVDNVSSQQMHEIRGSLRGEGVVLMGKSTMVRRAVKG 65
Query: 79 Y--------KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGP 130
+ ++ F+ GN G TN + + + AR G+ A V +P G
Sbjct: 66 FVNDNPEYERLLPFVKGNVGFVFTNQDLKTIRDKILDNKVAAPARAGAVAPADVYVPAG- 124
Query: 131 LEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKM 186
MEP F + G+P ++ +G +E+ +D + E G + A +L +L I
Sbjct: 125 ----NTGMEPGKTSFFQALGVPTKIARGTIEITADLKLVEAGSKVGASEATLLNMLNISP 180
Query: 187 ATFKLHLICRWSA 199
T+ + + + A
Sbjct: 181 FTYGMGISQVYDA 193
>gi|168014097|ref|XP_001759592.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689131|gb|EDQ75504.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 319
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYS----QAYKVSK------ 83
+E Y + + + +N+ + + +E R+ ++P ++ +G+ M A K
Sbjct: 22 LEEYSQVLICAADNVGSKQLQEIRKGLRPDSIVLMGKNTMMKRSIRIHAEKTGNKDYEEL 81
Query: 84 --FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 LPALVGNVGLIFTKGDLKEVREEIAKYKVGAPARVGLVAPIDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG VE+++ + +G + A +L LGI+ ++ L ++ +
Sbjct: 141 FQVLNIPTKINKGTVEIIAPVELVHKGDKVGSSEAALLAKLGIRPFSYGLVVVNIY 196
>gi|342890200|gb|EGU89062.1| hypothetical protein FOXB_00411 [Fusarium oxysporum Fo5176]
Length = 313
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 86/187 (45%), Gaps = 19/187 (10%)
Query: 21 EHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQA 78
E+K + ++ +E Y SI++ +N+ + + E R+ ++ ++ +G+ M R +
Sbjct: 6 ENKANYFDKLKGLLEAYNSIFIVEVDNVSSQQMHEIRQALRSKGVVLMGKNTMVRRALKT 65
Query: 79 Y--------KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGP 130
+ ++ + GN G TN +EV + + AR G+ A V +P G
Sbjct: 66 FIPDSPEYERLLPHVKGNVGFVFTNDDLKEVRDIILANKVAAPARAGALAPADVWVPAG- 124
Query: 131 LEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKM 186
MEP F + G+P ++ +G +E+ +D + E G + P A +L +L I
Sbjct: 125 ----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGSKVGPSEATLLNMLNISP 180
Query: 187 ATFKLHL 193
T+ + +
Sbjct: 181 FTYGMGI 187
>gi|337285273|ref|YP_004624747.1| acidic ribosomal protein P0 [Pyrococcus yayanosii CH1]
gi|334901207|gb|AEH25475.1| acidic ribosomal protein P0 [Pyrococcus yayanosii CH1]
Length = 342
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 86/192 (44%), Gaps = 15/192 (7%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSR-LLWVGRYPM------RYSQAY 79
V + N +++Y I + +M + R I+ ++ LL V + + + +Q
Sbjct: 12 VEELANLIKSYPVIALVDVSSMPAYPLSQMRRLIRENKGLLRVSKNTLIELAIKKAAQEL 71
Query: 80 ------KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQ 133
K+ ++ G G+ +T M ++ + A+ G+ A + + +P GP
Sbjct: 72 GKPELEKLINYIEGGAGILVTEMNPFKLYKFLQQNRQPAPAKPGAVAPKDIVIPAGPTPL 131
Query: 134 FTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
+ ++ G+P R+ +G V + D VV + G+ ++PE A IL LGI+ L L
Sbjct: 132 SPGPLVGQMQAMGIPARIERGKVTIQKDTVVLKAGEVITPELANILNALGIEPLEVGLDL 191
Query: 194 ICRWSAEDFELY 205
+ + ED +Y
Sbjct: 192 LAVY--EDGIVY 201
>gi|347842508|emb|CCD57080.1| similar to 60S acidic ribosomal protein P0 [Botryotinia fuckeliana]
Length = 312
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 87/193 (45%), Gaps = 19/193 (9%)
Query: 21 EHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQA 78
E+K + ++ +E YKSI++ + +N+ + + E R ++ ++ +G+ M R +
Sbjct: 6 ENKAGYFDKLKGLLEEYKSIFIVTVDNVSSQQMHEIRGSLRGEGVVLMGKNTMVRRAVKG 65
Query: 79 Y--------KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGP 130
+ ++ F+ GN G TN + + + AR G+ A V +P G
Sbjct: 66 FVNDNPEYERLLPFVKGNVGFVFTNQDLKTIRDKILDNKVAAPARAGAVAPADVYVPAG- 124
Query: 131 LEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKM 186
MEP F + G+P ++ +G +E+ +D + E G + A +L +L I
Sbjct: 125 ----NTGMEPGKTSFFQALGVPTKIARGTIEITADLKLVEAGSKVGASEATLLNMLNISP 180
Query: 187 ATFKLHLICRWSA 199
T+ + + + A
Sbjct: 181 FTYGMGISQVYDA 193
>gi|288551239|gb|ADC53148.1| putative mRNA turnover protein 4 [Oryza brachyantha]
gi|288551241|gb|ADC53149.1| putative mRNA turnover protein 4 [Oryza brachyantha]
Length = 30
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/30 (73%), Positives = 30/30 (100%)
Query: 165 CEEGKPLSPESARILRLLGIKMATFKLHLI 194
CEEGKP+SPE+A+ILRLLG++MATF+L+L+
Sbjct: 1 CEEGKPISPEAAQILRLLGMQMATFRLYLV 30
>gi|401424461|ref|XP_003876716.1| putative 60S acidic ribosomal subunit protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|401430326|ref|XP_003886550.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322492959|emb|CBZ28241.1| putative 60S acidic ribosomal subunit protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|356491450|emb|CBZ40973.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 322
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 82/189 (43%), Gaps = 28/189 (14%)
Query: 32 NAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRY------SQAYKVS--- 82
+ + Y + +N+R+ + + R ++ +G+ ++ +QA S
Sbjct: 17 DCLTKYSCVLFVGMDNVRSQQVHDVRRALRGKAEFMMGKKTLQAKIVEKRAQAKDASPDA 76
Query: 83 ----------KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLE 132
L GNTGL TN +E+ S+ + + AR G+ A V +P G
Sbjct: 77 KHFNDQCEEYNLLSGNTGLVFTNNAVQEITSVLDAHRVKAPARVGAIAPCDVVVPAG--- 133
Query: 133 QFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMAT 188
+ MEP F + + ++ KG+VE+V++ V G + +A +L+ L I
Sbjct: 134 --STGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLNTGDKVDNSTATLLQKLNISPFY 191
Query: 189 FKLHLICRW 197
++++++ W
Sbjct: 192 YQVNVLSVW 200
>gi|374633617|ref|ZP_09705982.1| ribosomal protein L10 [Metallosphaera yellowstonensis MK1]
gi|373523405|gb|EHP68325.1| ribosomal protein L10 [Metallosphaera yellowstonensis MK1]
Length = 331
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 76/178 (42%), Gaps = 7/178 (3%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAY------- 79
V S+ ++N K++ + + K E R++++ + V R + A
Sbjct: 17 VASLEEKLKNSKTVIIADVQGFPADKLHEIRKKLRNIADMKVTRNTLFLIAAKRAGLDVE 76
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ K++ G TN + L +K++ + G A E+V +P G +
Sbjct: 77 KLEKYISGTNAFIFTNENPFSISILLSKFKLKRYPMPGDKADEEVVIPAGDTGMTAGPIL 136
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
K + ++ G V +V D ++ + G P+ PE+A IL+ LGI KL L +
Sbjct: 137 STFGKLKVQTKVQDGKVHVVKDTLIAKPGDPIPPEAAPILQKLGIMPVYVKLKLKAAY 194
>gi|401885486|gb|EJT49600.1| 60S acidic ribosomal protein [Trichosporon asahii var. asahii CBS
2479]
gi|406694878|gb|EKC98197.1| 60S acidic ribosomal protein [Trichosporon asahii var. asahii CBS
8904]
Length = 312
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 86/192 (44%), Gaps = 19/192 (9%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
+ KE+ +R +E Y S+++ + +N+ + + R+ I+ + ++ +G+ M
Sbjct: 5 RADKELYFVKLRQLIEKYPSLFIVNIDNVSSQQCHMIRQSIRDNGVVLMGKNTMVRRALR 64
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
+ + KV ++ GN G TN ++V AR G+ A V +P G
Sbjct: 65 SMIADFPEYEKVLPYVKGNVGFVFTNGDLKDVRETIVSNVVAAPARAGALAPVDVYVPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+V+D V G + A +L +L I
Sbjct: 125 -----NTGMEPGKTSFFQALGIPTKIARGTIEIVNDVQVVAAGSKVGSSEATLLNMLNIS 179
Query: 186 MATFKLHLICRW 197
T+ + ++ +
Sbjct: 180 PFTYGMTVVAVY 191
>gi|320584043|gb|EFW98255.1| 60S acidic ribosomal protein P0 [Ogataea parapolymorpha DL-1]
Length = 311
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 91/192 (47%), Gaps = 19/192 (9%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQ 77
KE K + ++ +E YKS+++ +N+ + + E R+ ++ ++ +G+ M R +
Sbjct: 5 KEKKVEYFSKLKQLLEEYKSVFIVGVDNVSSQQMHEIRKALRKDAVVLMGKNTMVRRALR 64
Query: 78 AY--------KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
+ K+ F+ GN G TN + + ++ + + AR G+ A V +P G
Sbjct: 65 GFIAENPDYEKLMPFVRGNVGFVFTNSDLKTIRNVILENKVAAPARAGAIAPGDVFVPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+ +D + + + + P A +L +L I
Sbjct: 125 -----NTGMEPGKTSFFQALGVPTKIARGTIEITTDVKILTKDQKVGPSEATLLNMLNIS 179
Query: 186 MATFKLHLICRW 197
T+ L ++ +
Sbjct: 180 PFTYGLTVVQVY 191
>gi|154339904|ref|XP_001565909.1| putative 60S acidic ribosomal subunit protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134063227|emb|CAM45429.1| putative 60S acidic ribosomal subunit protein [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 323
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 90/201 (44%), Gaps = 32/201 (15%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
+E++E +V+ + Y + +N+R+ + + R ++ +G+ +
Sbjct: 9 REYEEHLVDCLTK----YSCVLFVGMDNVRSQQVHDVRRALRGKAEFVMGKKTLQAKIVE 64
Query: 74 RYSQAYKVS-------------KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTA 120
+++QA S L GNTGL TN +E++++ + + AR G+ A
Sbjct: 65 KHAQAKNASPGAKHFSEQCEEHNLLSGNTGLIFTNDNVQEIKAVLDSHRVKAPARVGAIA 124
Query: 121 TEKVELPEGPLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESA 176
V +P G + MEP F + + ++ KG+VE+V++ V G + +A
Sbjct: 125 PCDVVVPAG-----STGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSTGDKVDNSTA 179
Query: 177 RILRLLGIKMATFKLHLICRW 197
+L+ L I +++ ++ W
Sbjct: 180 TLLQKLNISPFYYQVDVLSVW 200
>gi|345561465|gb|EGX44554.1| hypothetical protein AOL_s00188g222 [Arthrobotrys oligospora ATCC
24927]
Length = 312
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 19/188 (10%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQ 77
K +K + ++ +E+YKSI++ + +N+ + + E R ++ ++ +G+ M R +
Sbjct: 5 KANKAIYFEKLKGLLEDYKSIFIVTVDNVSSQQMHEIRVALRGEGVVLMGKNTMVRRVIR 64
Query: 78 AY--------KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
++ ++ GN G TN +E AR G+ A V +P G
Sbjct: 65 TLVGDNPEYERLLPYVKGNVGFVFTNADLKETRDKILSNRVAAPARAGAVAPVDVWVPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+ SD + E G + A +L LL I
Sbjct: 125 -----NTGMEPGKTSFFQALGIPTKIARGTIEITSDLKLVESGTKVGASEASLLNLLNIS 179
Query: 186 MATFKLHL 193
T+ + +
Sbjct: 180 PFTYGMGV 187
>gi|50546801|ref|XP_500870.1| 60S acidic ribosomal protein P0 [Yarrowia lipolytica]
gi|49646736|emb|CAG83121.1| YALI0B14146p [Yarrowia lipolytica CLIB122]
Length = 314
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 83/177 (46%), Gaps = 14/177 (7%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKVSKF----- 84
++ ++ YKSI+V +N+ + + E R+ ++ ++ +G+ M +A + +
Sbjct: 16 LKQLLQEYKSIFVVGVDNVSSQQMHEIRKTLRGRAVVLMGKNTM-VRRALREFEEELPEA 74
Query: 85 ------LC-GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
LC GN G TN +E+ + + AR G+ A + V + + +
Sbjct: 75 AELLMPLCRGNVGFVFTNDDLKEIREVLLENRVLAPARAGAIAPKDVWI-QAANTGMPPD 133
Query: 138 MEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
F + G+P ++++G +E+ SD + ++ + P A +L +L I T+ + ++
Sbjct: 134 KTSFFQALGVPTKISRGTIEITSDVKILQQDVKVGPSEATLLNMLNISPFTYGMTVV 190
>gi|378733805|gb|EHY60264.1| 60S acidic ribosomal protein P0 [Exophiala dermatitidis NIH/UT8656]
Length = 314
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 89/200 (44%), Gaps = 27/200 (13%)
Query: 23 KEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY- 79
K V + ++ ++ YKSI++ +N+ + + E R+ ++ ++ +G+ M R + +
Sbjct: 8 KSVYFDKLKTLLDEYKSIFIVGVDNVSSQQMHEIRQALRGDAVVLMGKNTMVRRALKGFV 67
Query: 80 -------KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLE 132
++ + GN G TN + + AR G+ A V +P G
Sbjct: 68 ADNPEYERLLPHVKGNVGFIFTNGDLKTIRDKILANRVAAPARAGAIAPGDVYVPAG--- 124
Query: 133 QFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMAT 188
MEP F + G+P ++ +G +E+ +D + E G + P A +L +L I T
Sbjct: 125 --NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISPFT 182
Query: 189 FKLHLICRWSAEDFELYREG 208
+ + ++ ++Y EG
Sbjct: 183 YGMKVV--------QVYEEG 194
>gi|156031005|ref|XP_001584828.1| 60S acidic ribosomal protein P0 [Sclerotinia sclerotiorum 1980
UF-70]
gi|154700674|gb|EDO00413.1| 60S acidic ribosomal protein P0 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 312
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 87/193 (45%), Gaps = 19/193 (9%)
Query: 21 EHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQA 78
++K + ++ +E YKSI++ + +N+ + + E R ++ ++ +G+ M R +
Sbjct: 6 DNKAGYFDKLKGLLEEYKSIFIVTVDNVSSQQMHEIRGSLRGEGVVLMGKNTMVRRAVKG 65
Query: 79 Y--------KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGP 130
+ ++ F+ GN G TN + + + AR G+ A V +P G
Sbjct: 66 FIAENPEYERLLPFVKGNVGFVFTNQDLKTIRDKILDNKVAAPARAGAVAPADVYVPAG- 124
Query: 131 LEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKM 186
MEP F + G+P ++ +G +E+ +D + E G + A +L +L I
Sbjct: 125 ----NTGMEPGKTSFFQALGVPTKIARGTIEITADLKLVEAGSKVGASEATLLNMLNISP 180
Query: 187 ATFKLHLICRWSA 199
T+ + + + A
Sbjct: 181 FTYGMGISQVYDA 193
>gi|261334114|emb|CBH17108.1| 60S acidic ribosomal subunit protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 325
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 75 YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQF 134
+ Q + LCGNT + TN ++ S+ + + AR G+ A V +P G
Sbjct: 79 FHQVCTDKQLLCGNTSMIFTNSEVSDITSVLDSHRVQAPARVGAIAPCDVIVPAG----- 133
Query: 135 THEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
MEP F + + +++KG VE+VSD V G + +A +L+ L I ++
Sbjct: 134 NTGMEPKATAFFQALNIATKISKGTVEIVSDKKVLSTGDKVDNSTATLLQKLDISPFYYQ 193
Query: 191 LHLICRW 197
+ + W
Sbjct: 194 VEVQSVW 200
>gi|261334113|emb|CBH17107.1| 60S acidic ribosomal subunit protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 325
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 75 YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQF 134
+ Q + LCGNT + TN ++ S+ + + AR G+ A V +P G
Sbjct: 79 FHQVCTDKQLLCGNTSMIFTNSEVSDITSVLDSHRVQAPARVGAIAPCDVIVPAG----- 133
Query: 135 THEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
MEP F + + +++KG VE+VSD V G + +A +L+ L I ++
Sbjct: 134 NTGMEPKATAFFQALNIATKISKGTVEIVSDKKVLSTGDKVDNSTATLLQKLDISPFYYQ 193
Query: 191 LHLICRW 197
+ + W
Sbjct: 194 VEVQSVW 200
>gi|289742797|gb|ADD20146.1| 60s acidic ribosomal protein P0 [Glossina morsitans morsitans]
Length = 325
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 75 YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQF 134
+ Q + LCGNT + TN ++ S+ + + AR G+ A V +P G
Sbjct: 79 FHQVCTDKQLLCGNTSMIFTNSEVSDITSVLDSHRVQAPARVGAIAPCDVIVPAG----- 133
Query: 135 THEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
MEP F + + +++KG VE+VSD V G + +A +L+ L I ++
Sbjct: 134 NTGMEPKATAFFQALNIATKISKGTVEIVSDKKVLSTGDKVDNSTATLLQKLDISPFYYQ 193
Query: 191 LHLICRW 197
+ + W
Sbjct: 194 VEVQSVW 200
>gi|145591804|ref|YP_001153806.1| acidic ribosomal protein P0 [Pyrobaculum arsenaticum DSM 13514]
gi|145283572|gb|ABP51154.1| LSU ribosomal protein L10P [Pyrobaculum arsenaticum DSM 13514]
Length = 344
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 86/188 (45%), Gaps = 12/188 (6%)
Query: 27 VNSIRNAVE---NYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGR---YPMRYSQAY- 79
V ++ AVE Y +++F + E+R +I+P ++ + + + + +S+ Y
Sbjct: 20 VKTVNEAVELLKKYPYVFIFDLHGLSARVLNEYRYRIRPYGVIKIIKPTLFKIAFSKVYG 79
Query: 80 ----KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFT 135
+++ + G G T++ E+ + + A+ G A + +P GP
Sbjct: 80 GISTDIAEKIRGEIGFLFTDINPAEMIKIVAEKSVRRAAKPGDKAPFDIVVPAGPTNASP 139
Query: 136 HEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI- 194
+ K +P R+ +G + + D VV + G+ ++ E A +LR++GI+ +L L+
Sbjct: 140 GPIISKFGKLKIPTRVQEGKIWIAKDTVVAKAGQEITAEIAEVLRVVGIEPIFEQLRLVG 199
Query: 195 CRWSAEDF 202
W + +
Sbjct: 200 VLWKGKRY 207
>gi|71754749|ref|XP_828289.1| 60S acidic ribosomal subunit protein [Trypanosoma brucei TREU927]
gi|71754751|ref|XP_828290.1| 60S acidic ribosomal subunit protein [Trypanosoma brucei TREU927]
gi|70833675|gb|EAN79177.1| 60S acidic ribosomal subunit protein, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|70833676|gb|EAN79178.1| 60S acidic ribosomal subunit protein, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 324
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 75 YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQF 134
+ Q + LCGNT + TN ++ S+ + + AR G+ A V +P G
Sbjct: 79 FHQVCTDKQLLCGNTSMIFTNSEVSDITSVLDSHRVQAPARVGAIAPCDVIVPAG----- 133
Query: 135 THEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
MEP F + + +++KG VE+VSD V G + +A +L+ L I ++
Sbjct: 134 NTGMEPKATAFFQALNIATKISKGTVEIVSDKKVLSTGDKVDNSTATLLQKLDISPFYYQ 193
Query: 191 LHLICRW 197
+ + W
Sbjct: 194 VEVQSVW 200
>gi|67524553|ref|XP_660338.1| RLA0_NEUCR 60S acidic ribosomal protein P0 [Aspergillus nidulans
FGSC A4]
gi|40743846|gb|EAA63032.1| RLA0_NEUCR 60S acidic ribosomal protein P0 [Aspergillus nidulans
FGSC A4]
gi|259486353|tpe|CBF84123.1| TPA: hypothetical protein similar to 60S acidic ribosomal protein
P0 (Broad) [Aspergillus nidulans FGSC A4]
Length = 312
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
++N ++ YK++++ +N+ + + E R ++ ++ +G+ M R + +
Sbjct: 15 LKNLLDEYKTVFIVGVDNVSSQQMHEIRIALRGEGVVLMGKNTMVRRALKGFINDNPEYE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
++ + GN G TN +E + AR G+ A V +P G ME
Sbjct: 75 RLLPHVKGNVGFIFTNGDLKETKDKILSNRVAAPARAGAVAPADVWIPAG-----NTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
P F + G+P ++ +G +E+ +D + EEG + P A +L +L I T+ + +
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEITTDLKLVEEGNKVGPSEATLLNMLNISPFTYGMTI 187
>gi|429965003|gb|ELA47000.1| hypothetical protein VCUG_01531 [Vavraia culicis 'floridensis']
Length = 261
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 88/211 (41%), Gaps = 21/211 (9%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAY 79
KE K+++ ++ +Y V N+ + Q++ ++ W G+ + +
Sbjct: 7 KERKQLLFTHTKDYFTHYTQFIVVGLNNVTS-------SQLQSAKQAWQGKAEFLFGKNT 59
Query: 80 KVSKFL------------CGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELP 127
+ K L GN TN E++ + + FA+ G+ A V +
Sbjct: 60 TIKKALRDMGHEDIASRIFGNVAFIFTNGDVREIKQIVEDNKRNTFAKVGAIAQTDVWI- 118
Query: 128 EGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMA 187
E + + F + G+ ++ KG VE++ + EG+ ++P A +L ++ I+
Sbjct: 119 EKKVTSMGPDKTSFFQALGISTKITKGKVEIIQNSKALTEGEKVTPSQANLLAIMDIQPF 178
Query: 188 TFKLHLICRWSAEDF-ELYREGLDESDVESA 217
+ + L + + F E + + + DVES+
Sbjct: 179 VYAMKLESIYGDKQFYEPWIADITDKDVESS 209
>gi|379003525|ref|YP_005259197.1| 50S ribosomal protein L10 [Pyrobaculum oguniense TE7]
gi|375158978|gb|AFA38590.1| Ribosomal protein L10 [Pyrobaculum oguniense TE7]
Length = 344
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 86/188 (45%), Gaps = 12/188 (6%)
Query: 27 VNSIRNAVE---NYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGR---YPMRYSQAY- 79
V ++ AVE Y +++F + E+R +I+P ++ + + + + +S+ Y
Sbjct: 20 VKTVNEAVELLKKYPYVFIFDLHGLSARVLNEYRYRIRPYGVIKIIKPTLFKIAFSKVYG 79
Query: 80 ----KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFT 135
+++ + G G T++ E+ + + A+ G A + +P GP
Sbjct: 80 GISTDIAEKIRGEIGFLFTDINPAEMIKIVAEKSVRRAAKPGDKAPFDIVVPAGPTNASP 139
Query: 136 HEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI- 194
+ K +P R+ +G + + D VV + G+ ++ E A +LR++GI+ +L L+
Sbjct: 140 GPIISKFGKLKIPTRVQEGKIWIAKDTVVAKAGQEITAEIAEVLRVVGIEPIFEQLRLVG 199
Query: 195 CRWSAEDF 202
W + +
Sbjct: 200 VLWRGKRY 207
>gi|18313827|ref|NP_560494.1| acidic ribosomal protein P0 [Pyrobaculum aerophilum str. IM2]
gi|20978700|sp|Q8ZTT3.1|RLA0_PYRAE RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|18161389|gb|AAL64676.1| acidic ribosomal protein P0 (L10E) [Pyrobaculum aerophilum str.
IM2]
Length = 345
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 87/186 (46%), Gaps = 9/186 (4%)
Query: 26 IVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGR---YPMRYSQAY--- 79
IV+ ++ Y +++F + + E+R +++ ++ + + + + +++ Y
Sbjct: 23 IVSEATELLQKYPYVFLFDLHGLSSRILHEYRYRLRRYGVIKIIKPTLFKIAFTKVYGGI 82
Query: 80 --KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++++ + G G F T+ EV + + A+ G A + +P GP
Sbjct: 83 PAEIAEKVRGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGP 142
Query: 138 MEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI-CR 196
+ K +P R+ +G + + D VV + G+ ++PE A +LR++GI+ +L L+
Sbjct: 143 IISKFGKLKIPTRVQEGKIWIAKDTVVAKAGQEITPEMAEVLRVVGIEPIFEQLRLLGVI 202
Query: 197 WSAEDF 202
W + F
Sbjct: 203 WRGQRF 208
>gi|358248740|ref|NP_001239676.1| uncharacterized protein LOC100777482 [Glycine max]
gi|255641162|gb|ACU20858.1| unknown [Glycine max]
Length = 319
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 88/194 (45%), Gaps = 14/194 (7%)
Query: 17 KKGKEHKEVIVNS-IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-- 73
K+ K K++ ++ + + +E Y I V + +N+ + + + R+ ++ ++ +G+ M
Sbjct: 4 KQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNTMMK 63
Query: 74 ---------RYSQAY-KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEK 123
+ AY + L GN GL T +EV KY+ AR G A
Sbjct: 64 RSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPID 123
Query: 124 VELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLG 183
V +P G F + +P ++NKG VE+++ + ++G + A +L LG
Sbjct: 124 VVVPPGN-TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLG 182
Query: 184 IKMATFKLHLICRW 197
I+ ++ L ++ +
Sbjct: 183 IRPFSYGLVVLSVY 196
>gi|168014623|ref|XP_001759851.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688981|gb|EDQ75355.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 318
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYS----QAYKVSK------ 83
+E Y + + + +N+ + + + R+ ++P ++ +G+ M A K
Sbjct: 22 LEEYTQVLICAADNVGSKQLQSIRKGLRPDSIVLMGKNTMMKRSIRIHAEKTGNKDYEEL 81
Query: 84 --FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 LPALVGNVGLIFTKGDLKEVREEIGKYKVGAPARVGLVAPIDVIVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG VE+++ + +G + A +L LGI+ ++ L ++ +
Sbjct: 141 FQVLNIPTKINKGTVEIIAPVELVHKGDKVGSSEAALLAKLGIRPFSYGLVVVNIY 196
>gi|340058365|emb|CCC52720.1| putative 60S acidic ribosomal subunit protein [Trypanosoma vivax
Y486]
Length = 325
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 82/193 (42%), Gaps = 28/193 (14%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------RYSQAYKV 81
+ + + Y + +N+R+ + + R ++ L +G+ + R ++A K
Sbjct: 13 DRLNGCLTKYSRVLFCLMDNVRSQQVHDVRRDLRGKGELVMGKKTLQKKIVERRAEADKA 72
Query: 82 S-------------KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE 128
+ + LCGNT L TN + + + +K+ AR G+ A V +P
Sbjct: 73 TEADKLFHETCTEKQLLCGNTSLIFTNEDVKVITDVLDKHRVQAPARVGAIAPCDVIVPA 132
Query: 129 GPLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
G MEP F + + +++KG VE+VSD V G + +A +L+ L I
Sbjct: 133 G-----NTGMEPKATSFFQALNIATKISKGTVEIVSDKKVLSPGDRVDNSTAALLQKLDI 187
Query: 185 KMATFKLHLICRW 197
+++ + W
Sbjct: 188 SPFYYQVEVQSVW 200
>gi|451853639|gb|EMD66932.1| hypothetical protein COCSADRAFT_157383 [Cochliobolus sativus
ND90Pr]
Length = 314
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 27/203 (13%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
KE K + ++ YKSI++ + +N+ + + E R+ ++ ++ +G+ M
Sbjct: 5 KESKAAYFEKLDVLLKEYKSIFIVTVDNVSSQQMHEIRQSLRGEGVVLMGKNTMVRRALK 64
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
Y + ++ + GN G TN +E+ AR G+ A V +P G
Sbjct: 65 GLIADYPEYERLLPHVKGNVGFVFTNSDLKEIRDKILSNRVAAPARAGAVAPGDVYIPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+ +D + E G + A +L LL I
Sbjct: 125 -----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLIEAGSKVGASEATLLNLLNIS 179
Query: 186 MATFKLHLICRWSAEDFELYREG 208
T+ + + +++Y G
Sbjct: 180 PFTYGMGI--------YQIYDNG 194
>gi|351725493|ref|NP_001238374.1| 60S acidic ribosomal protein P0 [Glycine max]
gi|1710587|sp|P50346.1|RLA0_SOYBN RecName: Full=60S acidic ribosomal protein P0
gi|1196897|gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max]
Length = 320
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 14/194 (7%)
Query: 17 KKGKEHKEVIVNS-IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-- 73
K+ K K++ ++ + + +E Y I V + +N+ + + + R+ ++ ++ +G+ M
Sbjct: 4 KQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNTMMK 63
Query: 74 ---------RYSQAY-KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEK 123
+ AY + L GN GL T +EV KY+ AR G A
Sbjct: 64 RSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPID 123
Query: 124 VELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLG 183
V +P G F + +P ++NKG VE+++ + +G + A +L LG
Sbjct: 124 VVVPPGN-TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLG 182
Query: 184 IKMATFKLHLICRW 197
I+ ++ L ++ +
Sbjct: 183 IRPFSYGLVVLSVY 196
>gi|389593389|ref|XP_003721948.1| putative 60S acidic ribosomal subunit protein [Leishmania major
strain Friedlin]
gi|389593391|ref|XP_003721949.1| putative 60S acidic ribosomal subunit protein [Leishmania major
strain Friedlin]
gi|321438450|emb|CBZ12206.1| putative 60S acidic ribosomal subunit protein [Leishmania major
strain Friedlin]
gi|321438451|emb|CBZ12207.1| putative 60S acidic ribosomal subunit protein [Leishmania major
strain Friedlin]
Length = 323
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 89/201 (44%), Gaps = 32/201 (15%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRY---- 75
+E++E +V+ + Y + +N+R+ + + R ++ +G+ ++
Sbjct: 9 REYEERLVDCLTK----YSCVLFVGMDNVRSQQVHDVRRALRGKAEFMMGKKTLQAKIVE 64
Query: 76 --SQAYKVS-------------KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTA 120
+QA S L GNTGL TN +E+ S+ + + AR G+ +
Sbjct: 65 KRAQAKDASAEAKHFNDQCEEYNLLSGNTGLIFTNNAVQEITSVLDAHRVKAPARVGAIS 124
Query: 121 TEKVELPEGPLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESA 176
V +P G + MEP F + + ++ KG+VE+V++ V G + +A
Sbjct: 125 PCDVIVPAG-----STGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNSTA 179
Query: 177 RILRLLGIKMATFKLHLICRW 197
+L+ L I ++++++ W
Sbjct: 180 TLLQKLNISPFYYQVNVLSVW 200
>gi|68066140|ref|XP_675054.1| Ribosomal protein L10 [Plasmodium berghei strain ANKA]
gi|56494013|emb|CAH94410.1| Ribosomal protein L10, putative [Plasmodium berghei]
Length = 224
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 105/220 (47%), Gaps = 20/220 (9%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSI-----YVFSFENMRNLKFKE 55
MPKSKR+ VT+S TK K K +K+ I + + ++ + SI Y N K+
Sbjct: 1 MPKSKRN--VTISLTKVKKKLNKKEIKDQKFSELKKHASIQNIYIYALDIRTHSNNNLKK 58
Query: 56 FREQIKPSR-LLWVGRYP-MRYS-----------QAYKVSKFLCGNTGLFLTNMPKEEVE 102
E KPS ++G+ M+ + K+++ L GN L +T +V
Sbjct: 59 VIEYFKPSGGKFFIGKNKLMKLALGDDEKHEIKPNISKIAELLVGNRILLITKDEPLKVI 118
Query: 103 SLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDF 162
FN+++ ++ G+ + E + L G + M+ L+K + + + + D
Sbjct: 119 KFFNEFQPEEYIIHGNISKENIVLKCGEVLNAPVSMQKDLQKLKVNFDIVDQKIIIKEDK 178
Query: 163 VVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDF 202
V+ E+ K +S E+A++LR+L +K+ F + ++ W + +F
Sbjct: 179 VLAEKDKLVSLENAKLLRMLNMKIGKFDISVLAYWHSNNF 218
>gi|146090844|ref|XP_001466374.1| putative 60S acidic ribosomal subunit protein [Leishmania infantum
JPCM5]
gi|146091271|ref|XP_001466487.1| 60S acidic ribosomal subunit protein [Leishmania infantum JPCM5]
gi|398017826|ref|XP_003862100.1| unnamed protein product [Leishmania donovani]
gi|134070736|emb|CAM69091.1| putative 60S acidic ribosomal subunit protein [Leishmania infantum
JPCM5]
gi|134070849|emb|CAM69208.1| 60S acidic ribosomal subunit protein [Leishmania infantum JPCM5]
gi|322500328|emb|CBZ35406.1| unnamed protein product [Leishmania donovani]
Length = 323
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 89/201 (44%), Gaps = 32/201 (15%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRY---- 75
+E++E +V+ + Y + +N+R+ + + R ++ +G+ ++
Sbjct: 9 REYEERLVDCLTK----YSCVLFVGMDNVRSQQVHDVRRALRGKAEFIMGKKTLQAKIVE 64
Query: 76 --SQAYKVS-------------KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTA 120
+QA S L GNTGL TN +E+ S+ + + AR G+ +
Sbjct: 65 KRAQAKDASPEAKRFNDQCEEYNLLSGNTGLIFTNNAVQEITSVLDAHRVKAPARVGAIS 124
Query: 121 TEKVELPEGPLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESA 176
V +P G + MEP F + + ++ KG+VE+V++ V G + +A
Sbjct: 125 PCDVVVPAG-----STGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNSTA 179
Query: 177 RILRLLGIKMATFKLHLICRW 197
+L+ L I ++++++ W
Sbjct: 180 TLLQKLNISPFYYQVNVLSVW 200
>gi|6984134|gb|AAF34767.1|AF227622_1 60S acidic ribosomal protein PO [Euphorbia esula]
Length = 317
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMR------YSQAYKVSKFLC- 86
+++Y I V + +N+ + + + R+ ++ ++ +G+ M +S+ + FL
Sbjct: 19 LDDYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRVHSEKTGNTAFLNL 78
Query: 87 -----GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
GN GL T +EV KY+ AR G A V +P G F
Sbjct: 79 LPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGN-TGLDPSQTSF 137
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
+ +P ++NKG VE+++ + ++G + A +L LGI+ ++ L
Sbjct: 138 FQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGL 187
>gi|129771094|gb|ABO31368.1| 60S ribosomal protein [Gossypium hirsutum]
Length = 228
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 78/176 (44%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-----------RYSQAYK-V 81
++ Y + V + +N+ + + + R+ ++ ++ +G+ M + A+K +
Sbjct: 18 LDEYTQVLVVAADNVGSTQMQNIRKGLRGDSIILMGKNTMMKRSIRLHAERTGNDAFKNL 77
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN G T +EV KY+ AR G A V +P G F
Sbjct: 78 LPLLVGNVGFIFTKGDLKEVREEIAKYKVGAPARVGLVAPIDVIVPPGN-TGLDPSQTSF 136
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG VE+V+ + +G+ + A +L LGI+ ++ L ++ +
Sbjct: 137 FQVLNIPTKINKGTVEIVTAVELIRKGEKVGSSEAALLSKLGIRPFSYGLVVVSVY 192
>gi|302915807|ref|XP_003051714.1| 60S acidic ribosomal protein P0 [Nectria haematococca mpVI 77-13-4]
gi|256732653|gb|EEU46001.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 310
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 19 GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYS 76
GK +K + ++ +E Y SI++ +N+ + + E R+ ++ ++ +G+ M R
Sbjct: 3 GKTNKAGYFDKLKGLLEEYASIFIVEIDNVSSQQMHEIRQALRNKGVVLMGKNTMVRRAL 62
Query: 77 QAY--------KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE 128
+ + ++ + GN G TN +E+ + + AR G+ A V +P
Sbjct: 63 KTFIADSPEYERLLPHVKGNVGFVFTNEDLKEIRDVILSNKVAAPARAGAVAPVDVWVPA 122
Query: 129 GPLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
G MEP F + G+P ++ +G +E+ +D + E + P A +L +L I
Sbjct: 123 G-----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAQSKVGPSEATLLNMLNI 177
Query: 185 KMATFKLHL 193
T+ + +
Sbjct: 178 SPFTYGMGI 186
>gi|51847757|gb|AAU10516.1| 60S ribosomal protein, partial [Leishmania donovani]
Length = 315
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 89/201 (44%), Gaps = 32/201 (15%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRY---- 75
+E++E +V+ + Y + +N+R+ + + R ++ +G+ ++
Sbjct: 1 REYEERLVDCL----TKYSCVLFVGMDNVRSQQVHDVRRALRGKAEFIMGKKTLQAKIVE 56
Query: 76 --SQAYKVS-------------KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTA 120
+QA S L GNTGL TN +E+ S+ + + AR G+ +
Sbjct: 57 KRAQAKDASPEAKRFNDQCGEYNLLSGNTGLIFTNNAVQEITSVLDAHRVKAPARVGAIS 116
Query: 121 TEKVELPEGPLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESA 176
V +P G + MEP F + + ++ KG+VE+V++ V G + +A
Sbjct: 117 PCDVVVPAG-----STGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNSTA 171
Query: 177 RILRLLGIKMATFKLHLICRW 197
+L+ L I ++++++ W
Sbjct: 172 TLLQKLNISPFYYQVNVLSVW 192
>gi|449516071|ref|XP_004165071.1| PREDICTED: 60S acidic ribosomal protein P0-like [Cucumis sativus]
Length = 320
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 14/194 (7%)
Query: 17 KKGKEHKEVIVNS-IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-- 73
K K K+V +S + ++ Y + V + +N+ + + + R+ ++ ++ +G+ M
Sbjct: 4 KPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNTMMK 63
Query: 74 ---------RYSQAY-KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEK 123
++AY + L GN GL T +EV KY+ AR G A
Sbjct: 64 RSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPID 123
Query: 124 VELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLG 183
V +P G F + +P ++NKG VE+++ + ++G + A +L LG
Sbjct: 124 VIVPPGN-TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLG 182
Query: 184 IKMATFKLHLICRW 197
I+ ++ L ++ +
Sbjct: 183 IRPFSYGLVVLSVY 196
>gi|160331438|ref|XP_001712426.1| rla0 [Hemiselmis andersenii]
gi|159765874|gb|ABW98101.1| rla0 [Hemiselmis andersenii]
Length = 309
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 85/195 (43%), Gaps = 19/195 (9%)
Query: 37 YKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQAYKVSKFLC 86
Y I + +N+ + + ++ R+ ++ S +L +G+ + + + F
Sbjct: 21 YPKIIIVQADNVGSNQIQKCRKALQKSSILIMGKNSIIKKVLKKQIEKNPNMQDLYDFTT 80
Query: 87 GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQG 146
GN GL T E++ + + A+ G A +V +P GP E + F +
Sbjct: 81 GNVGLIFTKNDPFEIKKILKENRIPAPAKVGQIAQNEVIIPAGPTE-LPPDGTSFFQALN 139
Query: 147 MPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL-------ICRWSA 199
+P ++ KG +E+ + E+GK + A +L+ L I +F+L + +C +
Sbjct: 140 IPTKIQKGQIEIQDPIKLIEKGKVVGNSEAALLKKLNIVPFSFELQIKLVFDTDVC-YKP 198
Query: 200 EDFELYREGLDESDV 214
E+ +E L ES +
Sbjct: 199 TVLEITKEQLTESSL 213
>gi|302685369|ref|XP_003032365.1| 60S acidic ribosomal protein P0 [Schizophyllum commune H4-8]
gi|300106058|gb|EFI97462.1| hypothetical protein SCHCODRAFT_85263 [Schizophyllum commune H4-8]
Length = 311
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 93/210 (44%), Gaps = 20/210 (9%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
+E K ++ ++ + SI++ + +N+ + + + R ++ ++ +G+ M
Sbjct: 5 REQKAAYFEKLKELLQQFPSIFIVNVDNVGSNQMHQIRVALRGKGVVLMGKNTMVRRALR 64
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
Q K+ + GN G T +E+ L + AR G+ A + V +P G
Sbjct: 65 SFLSELPQFEKLLPHVKGNIGFVFTAGDLKEIRDLIIANKVAAPARAGAYAPKDVSIPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD V G + P A +L +L I
Sbjct: 125 -----NTGMEPGKTSFFQALGIPTKIARGTIEIVSDVKVVTAGTRVGPSEATLLNMLNIS 179
Query: 186 MATFKLHLICRW-SAEDFELYREGLDESDV 214
T+ + ++ + S F +DES++
Sbjct: 180 PFTYGMTVVQIYDSGNTFSPDVLDVDESEL 209
>gi|400602946|gb|EJP70544.1| 60S acidic ribosomal protein P0 [Beauveria bassiana ARSEF 2860]
Length = 331
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY------ 79
+ ++ +E YKSI++ +N+ + + E R ++ ++ +G+ M R + +
Sbjct: 13 DKLKGLLEEYKSIFIVEIDNVTSQQMHEIRHSLRGKGVVLMGKNTMVRRALKGFINDTPE 72
Query: 80 --KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++ ++ GN G TN +E+ + AR G+ A V +P G
Sbjct: 73 YERLLPYVKGNVGFVFTNDDLKEIRDIVLSNRVAAPARAGALAPIDVWVPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + +P ++ +G +E+ +D + E+G + P A +L +L I TF + +
Sbjct: 128 MEPGKTSFFQALNVPTKIARGTIEITTDLKLVEKGLKVGPSEATLLNMLNISPFTFGMGI 187
>gi|357466423|ref|XP_003603496.1| 60S acidic ribosomal protein p0 [Medicago truncatula]
gi|355492544|gb|AES73747.1| 60S acidic ribosomal protein p0 [Medicago truncatula]
Length = 323
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 78/176 (44%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-----------RYSQAY-KV 81
++ Y I V + +N+ + + + R+ ++ ++ +G+ M + A+ +
Sbjct: 22 IDEYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNTMMKRSVRMHAEKTGNNAFLNL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 IPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG VE+++ + ++G + A +L LGI+ ++ L ++ +
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVY 196
>gi|384252058|gb|EIE25535.1| hypothetical protein COCSUDRAFT_52908 [Coccomyxa subellipsoidea
C-169]
Length = 319
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 17/186 (9%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKP--SRLLWVGRYPMR------YSQAYKVSKF- 84
++ Y +V +N+ + +F + R ++ ++ +G+ M Y + K+
Sbjct: 21 LDGYDKCFVVHADNVGSRQFMDIRRGLRDVGDSIVLMGKNTMMKRSIRLYCEKTGDDKWP 80
Query: 85 -----LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
L GN GL T E+ KY+ AR G A V +P G
Sbjct: 81 ALLDHLVGNVGLIFTKADLAELRDEIEKYKVGAPARVGLVAPNSVVVPAGN-TGLDPSQT 139
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
F + +P ++N+G VE+VSD + + + + A +L LGIK ++ L L+ +
Sbjct: 140 SFFQALNIPTKINRGTVEIVSDVHLIKASEKVGGSEATLLSKLGIKPFSYGLVLLKVF-- 197
Query: 200 EDFELY 205
ED +Y
Sbjct: 198 EDGAMY 203
>gi|449463036|ref|XP_004149240.1| PREDICTED: 60S acidic ribosomal protein P0-like [Cucumis sativus]
Length = 320
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 14/194 (7%)
Query: 17 KKGKEHKEVIVNS-IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-- 73
K K K+V +S + ++ Y + V + +N+ + + + R+ ++ ++ +G+ M
Sbjct: 4 KPTKAEKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNTMMK 63
Query: 74 ---------RYSQAY-KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEK 123
++AY + L GN GL T +EV KY+ AR G A
Sbjct: 64 RSVRIHSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPID 123
Query: 124 VELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLG 183
V +P G F + +P ++NKG VE+++ + ++G + A +L LG
Sbjct: 124 VIVPPGN-TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLG 182
Query: 184 IKMATFKLHLICRW 197
I+ ++ L ++ +
Sbjct: 183 IRPFSYGLVVLSVY 196
>gi|13365631|dbj|BAB39163.1| ribosomal P0 subunit protein [Trypanosoma congolense]
Length = 344
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 9/127 (7%)
Query: 75 YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQF 134
+ Q + LCGNT + TN E+ + + + AR G+ A V +P G
Sbjct: 79 FHQTCADKQLLCGNTSMIFTNEDVTEITKVLDGHRVQAPARVGAIAPCDVIVPAG----- 133
Query: 135 THEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
MEP F + + +++KG VE+VSD V G + +A +L+ L I ++
Sbjct: 134 NTGMEPKATAFFQALNIATKISKGTVEIVSDKKVLSTGDKVDNSTATLLQKLDISPFYYQ 193
Query: 191 LHLICRW 197
+ + W
Sbjct: 194 VEVQSVW 200
>gi|354611040|ref|ZP_09028996.1| Acidic ribosomal protein P0-like protein [Halobacterium sp. DL1]
gi|353195860|gb|EHB61362.1| Acidic ribosomal protein P0-like protein [Halobacterium sp. DL1]
Length = 348
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 25/196 (12%)
Query: 14 KTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM 73
+T E K+ V+ + + +E Y S+ V S + + + ++ R + S L + R +
Sbjct: 6 RTTDHVPEWKQQEVDELVDLLEQYDSVGVVSVTGIPSKQLQDMRRGLHGSAALRMSRNTL 65
Query: 74 RYSQAYKV-------SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTA 120
+V ++++ G GL TN ++ F ++ + ++T G A
Sbjct: 66 LVRALEEVDDGLEELTQYISGEVGLVATN------DNPFGLFKQLEASKTPAPINAGEVA 119
Query: 121 TEKVELPEGPLEQFTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESAR 177
+ +PEG + PF L+ G R+ +G ++++ D VV EEG+ +S + A
Sbjct: 120 PNDIVIPEG---DTGIDPGPFVGELQTIGANARIQEGSIQVLEDSVVTEEGETVSNDVAN 176
Query: 178 ILRLLGIKMATFKLHL 193
+L LGI+ L L
Sbjct: 177 VLAELGIEPKEVGLDL 192
>gi|288551243|gb|ADC53150.1| putative mRNA turnover protein 4 [Oryza granulata]
gi|288551245|gb|ADC53151.1| putative mRNA turnover protein 4 [Oryza granulata]
gi|288551247|gb|ADC53152.1| putative mRNA turnover protein 4 [Leersia perrieri]
gi|288551249|gb|ADC53153.1| putative mRNA turnover protein 4 [Leersia perrieri]
gi|288551251|gb|ADC53154.1| putative mRNA turnover protein 4 [Potamophila parviflora]
Length = 30
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 29/30 (96%)
Query: 165 CEEGKPLSPESARILRLLGIKMATFKLHLI 194
CEEGKP+SPE+A+ LRLLG++MATF+L+L+
Sbjct: 1 CEEGKPISPEAAQTLRLLGMQMATFRLYLV 30
>gi|313586449|gb|ADR71235.1| 60S acidic ribosomal protein P0A [Hevea brasiliensis]
Length = 320
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 79/176 (44%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMR------YSQAYKVSKFLC- 86
++ Y I + + +N+ + + + R+ ++ ++ +G+ M +S+ + FL
Sbjct: 22 LDEYSQILIVAADNVGSNQLQNIRQGLRGDSVVLMGKNTMMKRTIRVHSEKTGNTAFLNL 81
Query: 87 -----GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 IPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG VE+++ + ++G + A +L LGI+ ++ L ++ +
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSAY 196
>gi|313586451|gb|ADR71236.1| 60S acidic ribosomal protein P0B [Hevea brasiliensis]
Length = 320
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 79/176 (44%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMR------YSQAYKVSKFLC- 86
++ Y I + + +N+ + + + R+ ++ ++ +G+ M +S+ + FL
Sbjct: 22 LDEYSQILIVAADNVGSNQLQNIRQGLRGDSVVLMGKNTMMKRTIRVHSEKTGNTAFLNL 81
Query: 87 -----GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 IPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG VE+++ + ++G + A +L LGI+ ++ L ++ +
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSAY 196
>gi|407929155|gb|EKG21991.1| Ribosomal protein L10/acidic P0 [Macrophomina phaseolina MS6]
Length = 315
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 84/187 (44%), Gaps = 19/187 (10%)
Query: 21 EHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQA 78
++K + ++ +E YKSI++ +N+ + + E R+ ++ ++ +G+ M R +
Sbjct: 6 QNKAAYFDKLKGLLEEYKSIFIVGVDNVSSQQMHEIRQALRSEAVVLMGKNTMVRRALRG 65
Query: 79 Y--------KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGP 130
+ ++ + GN G TN + + AR G+ A V +P G
Sbjct: 66 FVAENPEYERLLPHVKGNVGFIFTNGDLKTIRDKILSNRVAAPARAGAVAPADVFVPAG- 124
Query: 131 LEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKM 186
MEP F + G+P ++ +G +E+ SD + E G + A +L +L I
Sbjct: 125 ----NTGMEPGKTSFFQALGVPTKIARGTIEITSDLKLVEAGNKVGASEATLLNMLNISP 180
Query: 187 ATFKLHL 193
T+ +++
Sbjct: 181 FTYGMNV 187
>gi|71668474|ref|XP_821118.1| 60S acidic ribosomal protein P0 [Trypanosoma cruzi strain CL
Brener]
gi|70886487|gb|EAN99267.1| 60S acidic ribosomal protein P0 [Trypanosoma cruzi]
Length = 323
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 10/135 (7%)
Query: 83 KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP-- 140
K LCGNT L TN + ++ +K+ AR G+ A V +P G MEP
Sbjct: 87 KLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCDVIVPAG-----NTGMEPKA 141
Query: 141 --FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
F + + ++ KG VE+VSD V G + +A +L+ L I +++ + W
Sbjct: 142 TSFFQALNIATKIAKGTVEIVSDKKVLSAGDRVDNSTATLLQKLDISPFYYQVEVQSVWD 201
Query: 199 AEDFELYREGLDESD 213
RE L +D
Sbjct: 202 -RGMLFLREDLSITD 215
>gi|240102545|ref|YP_002958854.1| acidic ribosomal protein P0 [Thermococcus gammatolerans EJ3]
gi|259491695|sp|C5A428.1|RLA0_THEGJ RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|239910099|gb|ACS32990.1| LSU ribosomal protein L10E (rpl10E) [Thermococcus gammatolerans
EJ3]
Length = 340
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 85/191 (44%), Gaps = 14/191 (7%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------RYSQAY- 79
V + ++++ I + + + R++++ LL V R + R +Q
Sbjct: 12 VEELTKIIKSHPVIALVDVAGVPAYPLSKMRDKLRGKALLRVSRNTLIELAIKRAAQELN 71
Query: 80 -----KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQF 134
K++ ++ G + T M ++ L + + A+ G+ + V +P GP
Sbjct: 72 KPDLEKLADYIEGGAAILATEMNPFKLYKLLEESKTPAPAKPGAVVPKDVVIPAGPTSLA 131
Query: 135 THEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
+ ++ G+P R+ KG V + D+ V + G+ ++ + ARIL LGI+ L+L+
Sbjct: 132 PGPLVGEMQALGIPARIEKGKVTIQKDYTVLKAGEVITEQLARILNALGIEPLEVGLNLL 191
Query: 195 CRWSAEDFELY 205
+ ED +Y
Sbjct: 192 AAY--EDDIIY 200
>gi|342185308|emb|CCC94791.1| putative 60S acidic ribosomal subunit protein [Trypanosoma
congolense IL3000]
gi|342185309|emb|CCC94792.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 326
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 9/127 (7%)
Query: 75 YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQF 134
+ Q + LCGNT + TN E+ + + + AR G+ A V +P G
Sbjct: 79 FHQTCADKQLLCGNTSMIFTNEDVTEITKVLDGHRVQAPARVGAIAPCDVIVPAG----- 133
Query: 135 THEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
MEP F + + +++KG VE+VSD V G + +A +L+ L I ++
Sbjct: 134 NTGMEPKATAFFQALNIATKISKGTVEIVSDKKVLSTGDKVDNSTATLLQKLDISPFYYQ 193
Query: 191 LHLICRW 197
+ + W
Sbjct: 194 VEVQSVW 200
>gi|399949642|gb|AFP65300.1| 60S acidic ribosomal protein P0 [Chroomonas mesostigmatica
CCMP1168]
Length = 312
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 77/167 (46%), Gaps = 11/167 (6%)
Query: 37 YKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----RYSQAYKVSKF------LC 86
Y I + +N+ + + ++ R+ +K + +L +G+ + Q K S F
Sbjct: 23 YPRILIVQADNVGSNQIQKCRKSLKDNSILIMGKNSIIKKVLRKQIEKNSSFEEFYTHTS 82
Query: 87 GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQG 146
GN GL T + +++ + + AR G A V +P GP E + + F +
Sbjct: 83 GNVGLIFTKLDPFQIQKILKDNKIPAAARIGQIAQHDVIIPAGPTE-ISPDGTSFFQALN 141
Query: 147 MPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
+P ++ +G +E++ + E+GK + A +L+ L + +F+L +
Sbjct: 142 IPTKIQRGQIEILDPVKIIEKGKIVGSSEAALLKKLNLVPFSFELEI 188
>gi|303288816|ref|XP_003063696.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454764|gb|EEH52069.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 315
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 80/176 (45%), Gaps = 21/176 (11%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY----------KV 81
++++ ++ +N+ + +F + R ++P + +G+ M + + Y +
Sbjct: 21 LDDHDRAFLVHADNVGSRQFMDIRAALRPVSHILMGKNTMMRKCIREYCERKGDDSWNTL 80
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP- 140
+ L GN G+ T EV ++ A+ + A +V +P GP MEP
Sbjct: 81 ADKLIGNVGIIFTTGDMAEVRKTIAEFVVPAPAKVNAIAPCEVVIPAGP-----TGMEPS 135
Query: 141 ---FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
F + + ++NKG +E++SDF E G+ ++ +A +L +G T+ L +
Sbjct: 136 QTGFFQVLNIATKINKGAIEILSDFKCVEAGEKVTSSAATLLGKMGFTPFTYGLEV 191
>gi|398397829|ref|XP_003852372.1| 60S acidic ribosomal protein P0 [Zymoseptoria tritici IPO323]
gi|339472253|gb|EGP87348.1| hypothetical protein MYCGRDRAFT_104664 [Zymoseptoria tritici
IPO323]
Length = 313
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 81/180 (45%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY------ 79
+ ++ +E YKSI++ + +N+ + + E R ++ ++ +G+ M R + +
Sbjct: 13 DKLKGLLEEYKSIFIVTVDNVSSQQMHEIRHSLRGDSVVLMGKNTMVRRALKTFIPDSPE 72
Query: 80 --KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++ + GN G TN +E AR G+ A + V +P G
Sbjct: 73 YERLLPHVKGNVGFVFTNSDLKETRDKILSNRVAAPARAGAVAPDDVFIPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+ SD + + G + A +L +L I T+ + +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEITSDLKLVQAGSKVGASEATLLNMLNISPFTYGMGI 187
>gi|302768062|ref|XP_002967451.1| hypothetical protein SELMODRAFT_87354 [Selaginella moellendorffii]
gi|300165442|gb|EFJ32050.1| hypothetical protein SELMODRAFT_87354 [Selaginella moellendorffii]
Length = 323
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 81/179 (45%), Gaps = 23/179 (12%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------RYSQ------AYKV 81
+++Y + + +N+ + + ++ R+ ++P ++ +G+ + +Y++ +
Sbjct: 22 LDDYARALICAADNVGSNQMQQIRQGLRPDSVVLMGKNTLMKRTIRKYAEKTGNRDVLNL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP- 140
L GN GL T +EV + KY+ AR G A V + G + ++P
Sbjct: 82 IPLLVGNVGLVFTRGDLKEVREVIAKYKVGAPARVGLVAPIDVTIQPG-----STGLDPS 136
Query: 141 ---FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICR 196
F + +P ++NKG VE+VS + +G + A +L L I+ F L+ R
Sbjct: 137 HTSFFQALNIPTKINKGTVEIVSSVELISKGTKVGSSEAALLAKLRIR--PFSYGLVVR 193
>gi|147843260|emb|CAN80537.1| hypothetical protein VITISV_003812 [Vitis vinifera]
Length = 320
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 19/196 (9%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-----------RYSQAY-KV 81
++ Y I + + +N+ + + + R+ ++ ++ +G+ M +QA+ +
Sbjct: 22 LDEYTQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSIRLHAEKTGNQAFLNL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 IPLLVGNVGLIFTRGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW---- 197
+ +P ++NKG VE+++ + +G + A +L LGI+ ++ L ++ +
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGS 200
Query: 198 --SAEDFELYREGLDE 211
S E +L E L E
Sbjct: 201 VFSPEVLDLTEEDLME 216
>gi|452002022|gb|EMD94481.1| hypothetical protein COCHEDRAFT_1020389 [Cochliobolus
heterostrophus C5]
Length = 314
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 87/203 (42%), Gaps = 27/203 (13%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
KE K + ++ YKSI++ + +N+ + + E R+ ++ ++ +G+ M
Sbjct: 5 KESKAAYFEKLDVLLKEYKSIFIVTVDNVSSQQMHEIRQSLRGEGVVLMGKNTMVRRALK 64
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
Y + ++ + GN G TN +++ AR G+ A V +P G
Sbjct: 65 GLIADYPEYERLLPHVKGNVGFVFTNGDLKQIRDKILSNRVAAPARAGAVAPGDVYIPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+ +D + E G + A +L LL I
Sbjct: 125 -----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLIEAGNKVGASEATLLNLLNIS 179
Query: 186 MATFKLHLICRWSAEDFELYREG 208
T+ + + +++Y G
Sbjct: 180 PFTYGMGI--------YQIYDNG 194
>gi|14521982|ref|NP_127459.1| acidic ribosomal protein P0 [Pyrococcus abyssi GE5]
gi|12229943|sp|Q9UXS5.1|RLA0_PYRAB RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|5459202|emb|CAB50688.1| rpl10E LSU ribosomal protein L10E [Pyrococcus abyssi GE5]
gi|380742623|tpe|CCE71257.1| TPA: acidic ribosomal protein P0 [Pyrococcus abyssi GE5]
Length = 341
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 15/192 (7%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSR-LLWVGRYPM------RYSQAY 79
V + N +++Y I + +M + R I+ + LL V R + + +Q
Sbjct: 12 VEELANLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAIKKAAQEL 71
Query: 80 ------KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQ 133
K+++++ G+ +TNM ++ + A+ G+ + V +P GP
Sbjct: 72 GKPELEKLAEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVIPAGPTPL 131
Query: 134 FTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
+ ++ G+P R+ +G V + D V + G+ ++PE A IL LGI+ L +
Sbjct: 132 APGPIVGQMQAMGIPARIERGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDV 191
Query: 194 ICRWSAEDFELY 205
+ + ED +Y
Sbjct: 192 LAVY--EDGIVY 201
>gi|119719140|ref|YP_919635.1| acidic ribosomal protein P0 [Thermofilum pendens Hrk 5]
gi|119524260|gb|ABL77632.1| LSU ribosomal protein L10P [Thermofilum pendens Hrk 5]
Length = 294
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%)
Query: 81 VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP 140
+ + L G + TN E+ +K + AR G AT ++ LP G M
Sbjct: 83 IEEHLRGQNAVIFTNKNPFEILFFLDKQKIMREARAGDIATSEIVLPAGNTGIPPGPMIS 142
Query: 141 FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
K G+P R+ +G + + D VV + G +SPE A +L LG+K KL +
Sbjct: 143 NFNKLGIPTRVQEGSIWIAKDTVVAKPGDVISPELAELLSKLGLKPIESKLQI 195
>gi|255569309|ref|XP_002525622.1| 60S acidic ribosomal protein P0, putative [Ricinus communis]
gi|223535058|gb|EEF36740.1| 60S acidic ribosomal protein P0, putative [Ricinus communis]
Length = 323
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 80/178 (44%), Gaps = 13/178 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-----------RYSQAY-KV 81
++ Y I V + +N+ + + + R+ ++ ++ +G+ M + A+ +
Sbjct: 22 LDEYSQILVVAADNVGSNQLQSIRQGLRGDSVVLMGKNTMMKRSVRLHAEKTGNNAFLNL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 IPLLVGNVGLIFTKGELKEVREEIAKYKVGAPARVGLIAPIDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
+ +P ++NKG VE+++ + ++G+ + + +L LGI+ ++ L ++ + +
Sbjct: 141 FQVLNIPTKINKGTVEIITPVDIIKKGEKVGSSESALLAKLGIRPFSYGLVVLTVYDS 198
>gi|225449110|ref|XP_002276842.1| PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
Length = 320
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 19/196 (9%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-----------RYSQAY-KV 81
++ Y I + + +N+ + + + R+ ++ ++ +G+ M +QA+ +
Sbjct: 22 LDEYTQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSIRLHAEKTGNQAFLNL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 IPLLVGNVGLIFTRGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW---- 197
+ +P ++NKG VE+++ + +G + A +L LGI+ ++ L ++ +
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGS 200
Query: 198 --SAEDFELYREGLDE 211
S E +L E L E
Sbjct: 201 VFSPEVLDLTEEDLME 216
>gi|448671742|ref|ZP_21687547.1| acidic ribosomal protein P0 [Haloarcula amylolytica JCM 13557]
gi|445764878|gb|EMA16021.1| acidic ribosomal protein P0 [Haloarcula amylolytica JCM 13557]
Length = 348
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 86/183 (46%), Gaps = 25/183 (13%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKV----- 81
V++I +E+Y+S+ V + + + + ++ R + + L V R + +V
Sbjct: 20 VDAIVAMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERALDEVDDGLE 79
Query: 82 --SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPEGPLEQ 133
+ ++ G GL T+ ++ F+ +++ + ++T G A + +PEG
Sbjct: 80 DLNSYITGQVGLIGTD------DNPFSLFQELEASKTPAPIGAGEVAPNDIVIPEG---D 130
Query: 134 FTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
+ PF L+ G R+ +G ++++SD VV + G+ +S E A +L LGI+
Sbjct: 131 TGVDPGPFVGELQSVGADARIQEGSIQVLSDSVVLDTGEEVSQELANVLNELGIEPKEVG 190
Query: 191 LHL 193
L L
Sbjct: 191 LDL 193
>gi|390960573|ref|YP_006424407.1| acidic ribosomal protein P0/50S ribosomal protein L10 [Thermococcus
sp. CL1]
gi|390518881|gb|AFL94613.1| acidic ribosomal protein P0/50S ribosomal protein L10 [Thermococcus
sp. CL1]
Length = 339
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 83/191 (43%), Gaps = 14/191 (7%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------RYSQAY- 79
V + +++Y I + N+ + RE+++ LL V R + + +Q
Sbjct: 12 VEELAKIIKSYPVIALVDVANVPAYPLSKMREKLRGKALLRVSRNTLIELAIKKAAQELN 71
Query: 80 -----KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQF 134
K+ + G G+ T M ++ L + + A+ G+ V +P GP
Sbjct: 72 NPDLEKLIDHIQGGAGILATEMNPFKLYKLLEESKTPAPAKPGAVVPRDVVIPAGPTSLS 131
Query: 135 THEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
+ ++ G+P R+ +G V + D+ V + G+ ++ + ARIL L I+ L+L+
Sbjct: 132 PGPLVGEMQALGIPARIERGKVSIQKDYTVLKAGEVITDQLARILNALSIEPLEVGLNLL 191
Query: 195 CRWSAEDFELY 205
+ ED +Y
Sbjct: 192 AAY--EDGIVY 200
>gi|452979862|gb|EME79624.1| hypothetical protein MYCFIDRAFT_51867 [Pseudocercospora fijiensis
CIRAD86]
Length = 315
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 80/180 (44%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQ 77
+ ++ +E YKSI++ + +N+ + + E R+ ++ ++ +G+ M + +
Sbjct: 13 DKLKGLLEEYKSIFIVTVDNVSSQQMHEIRQSMRGEGVVLMGKNTMVRRALKTFQADFPE 72
Query: 78 AYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++ + GN G TN + AR G+ A V +P G
Sbjct: 73 YERLLPHVRGNVGFVFTNADLKATREKILSNRVAAPARAGAVAPADVYVPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+ +D + E G + P A +L +L I T+ + +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGNKVGPSEATLLNMLNISPFTYGMGI 187
>gi|302753674|ref|XP_002960261.1| hypothetical protein SELMODRAFT_229877 [Selaginella moellendorffii]
gi|300171200|gb|EFJ37800.1| hypothetical protein SELMODRAFT_229877 [Selaginella moellendorffii]
Length = 323
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 81/179 (45%), Gaps = 23/179 (12%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------RYSQ------AYKV 81
+++Y + + +N+ + + ++ R+ ++P ++ +G+ + +Y++ +
Sbjct: 22 LDDYGRALICAADNVGSNQMQQIRQGLRPDSVVLMGKNTLMKRTIRKYAEKTGNRDVLNL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP- 140
L GN GL T +EV + KY+ AR G A V + G + ++P
Sbjct: 82 IPLLVGNVGLVFTRGDLKEVREVIAKYKVGAPARVGLVAPIDVTIQPG-----STGLDPS 136
Query: 141 ---FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICR 196
F + +P ++NKG VE+VS + +G + A +L L I+ F L+ R
Sbjct: 137 HTSFFQALNIPTKINKGTVEIVSSVELISKGTKVGSSEAALLAKLRIR--PFSYGLVVR 193
>gi|388501388|gb|AFK38760.1| unknown [Lotus japonicus]
Length = 322
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-----------RYSQAY-KV 81
+++Y I V + +N+ + + + R ++ ++ +G+ M + Y +
Sbjct: 21 LDDYTQILVVNADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTVRIHAEKSGNNVYLNL 80
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 81 IPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGN-TGLDPSQTSF 139
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG VE+++ + ++G + A +L LGI+ ++ L ++ +
Sbjct: 140 FQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVY 195
>gi|448681631|ref|ZP_21691722.1| acidic ribosomal protein P0 [Haloarcula argentinensis DSM 12282]
gi|445767501|gb|EMA18604.1| acidic ribosomal protein P0 [Haloarcula argentinensis DSM 12282]
Length = 347
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 86/183 (46%), Gaps = 25/183 (13%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKV----- 81
V++I + +E+Y+S+ V + + + + ++ R + + L V R + +V
Sbjct: 20 VDAIVDMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERALDEVDDGLE 79
Query: 82 --SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPEGPLEQ 133
+ ++ G GL T+ ++ F+ +++ + ++T G A + +PEG
Sbjct: 80 DLNSYITGQVGLIGTD------DNPFSLFQELEASKTPAPIGAGEVAPNDIVIPEG---D 130
Query: 134 FTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
+ PF L+ G R+ +G ++++SD V + G+ +S E A +L LGI+
Sbjct: 131 TGVDPGPFVGELQSVGADARIQEGSIQVLSDSTVLDTGEEVSQELANVLNELGIEPKEVG 190
Query: 191 LHL 193
L L
Sbjct: 191 LDL 193
>gi|407847874|gb|EKG03452.1| 60S acidic ribosomal protein P0 [Trypanosoma cruzi]
Length = 323
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 10/135 (7%)
Query: 83 KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP-- 140
K LCGNT L TN + ++ +K+ AR G+ A V +P G MEP
Sbjct: 87 KLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCDVIVPAG-----NTGMEPKA 141
Query: 141 --FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
F + + ++ KG VE+VSD V G + +A +L+ L I +++ + W
Sbjct: 142 TSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNSTATLLQKLDISPFYYQVEVQSVWD 201
Query: 199 AEDFELYREGLDESD 213
RE L +D
Sbjct: 202 -RGMLFLREDLSITD 215
>gi|384493822|gb|EIE84313.1| hypothetical protein RO3G_09023 [Rhizopus delemar RA 99-880]
Length = 309
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 84/189 (44%), Gaps = 19/189 (10%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
+E K + + + Y+SI++ + +N+ + + + R ++ + +G+ M
Sbjct: 4 RESKAAYFQKLNDYLNTYQSIFIVNVDNVSSNQMHQIRVSLRGEATVLMGKNTMVRRALK 63
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
+ K+ F+ GN G TN +++ + AR G+ A V +P G
Sbjct: 64 GLIGERPELEKLLNFVKGNIGFVFTNGDLKDIRTKIVSNRVAAPARAGAVAPADVIVPAG 123
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD + + G+ + A +L +L I
Sbjct: 124 -----NTGMEPGKTSFFQALGIPTKIARGTIEIVSDVSLVQAGEKVGASEATLLNMLNIS 178
Query: 186 MATFKLHLI 194
T+ + ++
Sbjct: 179 PFTYGMGVV 187
>gi|449299432|gb|EMC95446.1| hypothetical protein BAUCODRAFT_578183 [Baudoinia compniacensis
UAMH 10762]
Length = 322
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 82/180 (45%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY------ 79
+ ++ +E+YKSI++ + +N+ + + E R ++ ++ +G+ M R + +
Sbjct: 13 DKLKGLLEDYKSIFIVTVDNVSSQQMHEIRHAMRGKGVVLMGKNTMVRRAIKTFQNDNPE 72
Query: 80 --KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++ + GN G TN +E AR G+ A + V +P G
Sbjct: 73 YERLLPHVKGNVGFVFTNADLKETREQILSNRIAAPARAGAVAPQDVFIPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+ +D + E G + A +L +L I T+ + +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEITADLKIVEGGSKVGASEATLLNMLNISPFTYGMGI 187
>gi|361132034|gb|EHL03649.1| putative 60S acidic ribosomal protein P0 [Glarea lozoyensis 74030]
Length = 366
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 82/180 (45%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY------ 79
+ ++ +E Y SI++ + +N+ + + E R ++ ++ +G+ M R + +
Sbjct: 13 DKLKGLLEEYSSIFIVTVDNVSSQQMHEIRLALRGEGVVLMGKNTMVRRAVKGFISDNPE 72
Query: 80 --KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++ F+ GN G TN +E+ + AR G+ A V +P G
Sbjct: 73 YERLLPFVKGNVGFVFTNGDLKEIRDKILANKVAAPARAGALAPADVYVPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+ +D + E G + A +L +L I T+ + +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGNKVGASEATLLNMLNISPFTYGMGI 187
>gi|448685416|ref|ZP_21693408.1| acidic ribosomal protein P0 [Haloarcula japonica DSM 6131]
gi|445782027|gb|EMA32878.1| acidic ribosomal protein P0 [Haloarcula japonica DSM 6131]
Length = 348
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 86/183 (46%), Gaps = 25/183 (13%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKV----- 81
V++I + +E+Y+S+ V + + + + ++ R + + L V R + +V
Sbjct: 20 VDAIVDMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERALDEVDDGLE 79
Query: 82 --SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPEGPLEQ 133
+ ++ G GL T+ ++ F+ +++ + ++T G A + +PEG
Sbjct: 80 DLNSYITGQVGLIGTD------DNPFSLFQELEASKTPAPIGAGEVAPNDIVIPEG---D 130
Query: 134 FTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
+ PF L+ G R+ +G ++++SD V + G+ +S E A +L LGI+
Sbjct: 131 TGVDPGPFVGELQSVGADARIQEGSIQVLSDSTVLDTGEEVSQELANVLNELGIEPKEVG 190
Query: 191 LHL 193
L L
Sbjct: 191 LDL 193
>gi|71668472|ref|XP_821117.1| 60S acidic ribosomal protein P0 [Trypanosoma cruzi strain CL
Brener]
gi|1710588|sp|P26796.2|RLA0_TRYCR RecName: Full=60S acidic ribosomal protein P0
gi|295372|gb|AAA30236.1| ribosomal protein P0 [Trypanosoma cruzi]
gi|70886486|gb|EAN99266.1| 60S acidic ribosomal protein P0 [Trypanosoma cruzi]
Length = 323
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 83 KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP-- 140
K LCGNT L TN + ++ +K+ AR G+ A V +P G MEP
Sbjct: 87 KLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCDVIVPAG-----NTGMEPKA 141
Query: 141 --FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
F + + ++ KG VE+VSD V G + +A +L+ L I +++ + W
Sbjct: 142 TSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNSTATLLQKLDISPFYYQVEVQSVW 200
>gi|449455034|ref|XP_004145258.1| PREDICTED: 60S acidic ribosomal protein P0-2-like [Cucumis sativus]
gi|449470509|ref|XP_004152959.1| PREDICTED: 60S acidic ribosomal protein P0-2-like [Cucumis sativus]
gi|449523077|ref|XP_004168551.1| PREDICTED: 60S acidic ribosomal protein P0-2-like [Cucumis sativus]
Length = 320
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMR------------YSQAYKV 81
++ Y + + +N+ + + + R+ ++ ++ +G+ M + +
Sbjct: 22 LDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNTMMKRSIRIHSENTGNTAVTNL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV+ KY+ AR G A V +P G F
Sbjct: 82 LPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAPIDVIVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG VE+++ + ++G + A +L LGI+ ++ L ++ +
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSKLGIRPFSYGLIVVSVY 196
>gi|263173401|gb|ACY69932.1| 60S acidic ribosomal protein P0 [Cimex lectularius]
Length = 320
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 81/192 (42%), Gaps = 25/192 (13%)
Query: 19 GKEHKEV----IVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM- 73
GKE KE N + +E Y ++ +N+ + + ++ R ++ S ++ +G+ M
Sbjct: 2 GKEDKETWKSNYFNKLIQLLEEYPKCFIVGADNVGSKQMQQIRVSLRGSAVVLMGKNTMM 61
Query: 74 ---------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKV 124
R K+ + GN G T EV + + AR G+ A V
Sbjct: 62 RKAIRGHIERNQALEKIIPHIRGNVGFVFTRGELPEVRDKLLQNKVRAPARAGAIAPCPV 121
Query: 125 ELPE-----GPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARIL 179
+P GP E F + +P +++KG +E+++D + +EG + A +L
Sbjct: 122 VIPAQNTGLGP------EKTSFFQALSIPTKISKGTIEIINDVHILKEGDKVGASEATLL 175
Query: 180 RLLGIKMATFKL 191
+L I ++ L
Sbjct: 176 NMLNISPFSYGL 187
>gi|388503628|gb|AFK39880.1| unknown [Medicago truncatula]
Length = 323
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-----------RYSQAY-KV 81
++ Y I V + +N+ + + + R+ ++ ++ +G+ M + A+ +
Sbjct: 22 IDEYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNTMMKRSVRMHAEKTGNNAFLNL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 IPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG E+++ + ++G + A +L LGI+ ++ L ++ +
Sbjct: 141 FQVLNIPTKINKGTAEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVY 196
>gi|223478893|ref|YP_002582911.1| 50S ribosomal protein P0 (L10p) [Thermococcus sp. AM4]
gi|214034119|gb|EEB74945.1| LSU ribosomal protein P0 (L10p) [Thermococcus sp. AM4]
Length = 339
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 83/191 (43%), Gaps = 14/191 (7%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------RYSQAY- 79
V + ++++ I + + + R++++ LL V R + R +Q
Sbjct: 12 VEELTKIIKSHPVIALVDVAGVPAYPLSKMRDKLRGKALLRVSRNTLIELAIKRAAQELN 71
Query: 80 -----KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQF 134
K+ ++ G + T M ++ L + + A+ G+ V +P GP
Sbjct: 72 KPDLEKLVDYIEGGAAILATEMNPFKLYKLLEESKTPAPAKPGAVVPRDVVIPAGPTSLA 131
Query: 135 THEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
+ ++ G+P R+ KG V + D+ V + G+ ++ + ARIL LGI+ L+L+
Sbjct: 132 PGPLVGEMQALGIPARIEKGKVSIQKDYTVLKAGEVITEQLARILNALGIEPLEVGLNLL 191
Query: 195 CRWSAEDFELY 205
+ ED +Y
Sbjct: 192 AAY--EDGIVY 200
>gi|118486293|gb|ABK94988.1| unknown [Populus trichocarpa]
gi|118487741|gb|ABK95694.1| unknown [Populus trichocarpa]
Length = 320
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMR------YSQAYKVSKFLC- 86
++ Y I + + +N+ + + + R ++ ++ +G+ M +S+ FL
Sbjct: 22 LDEYSQILIAAADNVGSTQLQNIRRGLRGDSVVLMGKNTMMKRSVRIHSEKTANKAFLNL 81
Query: 87 -----GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 IPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG VE+++ + ++G + A +L LGI+ ++ L ++ +
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSAY 196
>gi|302348048|ref|YP_003815686.1| LSU ribosomal protein L10P [Acidilobus saccharovorans 345-15]
gi|302328460|gb|ADL18655.1| LSU ribosomal protein L10P [Acidilobus saccharovorans 345-15]
Length = 344
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 114 ARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSP 173
A+ G AT+ + +PEG M K +P + KG + + SD VV ++G +SP
Sbjct: 115 AKPGQVATKDIVVPEGDTGIRPGPMVSVFGKLKIPYEVRKGTIYIKSDTVVAKKGDVISP 174
Query: 174 ESARILRLLGIKMATFKLHLICRWSAE 200
+ A +L+ LGI+ L ++ W E
Sbjct: 175 DLASLLQQLGIQPMEIGLDIVAAWDGE 201
>gi|225448367|ref|XP_002268645.1| PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
Length = 320
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 86/196 (43%), Gaps = 19/196 (9%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMR------YSQAYKVSKFL-- 85
++ Y I + + +N+ + + + R+ ++ ++ +G+ M +++ + FL
Sbjct: 22 LDEYSQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSIRLHAEKTGNTAFLNL 81
Query: 86 ----CGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 IPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW---- 197
+ +P ++NKG VE+++ + ++G + A +L LGI+ ++ L ++ +
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGS 200
Query: 198 --SAEDFELYREGLDE 211
S E +L E L E
Sbjct: 201 VFSPEVLDLTEEDLIE 216
>gi|384501984|gb|EIE92475.1| hypothetical protein RO3G_16997 [Rhizopus delemar RA 99-880]
Length = 309
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 84/189 (44%), Gaps = 19/189 (10%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
+E K + + + Y+SI++ + +N+ + + + R ++ + +G+ M
Sbjct: 4 RESKAAYFQKLNDYLNTYQSIFIVNVDNVSSNQMHQIRVSLRGEATVLMGKNTMVRRALK 63
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
+ K+ F+ GN G TN +++ + AR G+ A V +P G
Sbjct: 64 GLIGERPELEKLLNFVKGNIGFVFTNGDLKDIRNKIVSNRVAAPARAGAVAPADVIVPAG 123
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD + + G+ + A +L +L I
Sbjct: 124 -----NTGMEPGKTSFFQALGIPTKIARGTIEIVSDVSLVQAGEKVGASEATLLNMLNIS 178
Query: 186 MATFKLHLI 194
T+ + ++
Sbjct: 179 PFTYGMGVV 187
>gi|452842237|gb|EME44173.1| hypothetical protein DOTSEDRAFT_71859 [Dothistroma septosporum
NZE10]
Length = 315
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 80/180 (44%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQ 77
+ ++ +E+YKSI++ + +N+ + + E R ++ ++ +G+ M + +
Sbjct: 13 DKLKGLLEDYKSIFIVTVDNVSSQQMHEIRISLRGQGVVLMGKNTMVRRALRTFQPDFPE 72
Query: 78 AYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++ + GN G TN +E AR G+ A V +P G
Sbjct: 73 YERLLPHVKGNVGFIFTNGDLKETREKILANRVAAPARAGAVAPADVYIPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+ +D + E G + A +L +L I T+ + +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGSKVGASEATLLNMLNISPFTYGMGI 187
>gi|403164562|ref|XP_003324651.2| 60S acidic ribosomal protein P0 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165216|gb|EFP80232.2| large subunit ribosomal protein LP0 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 312
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 86/194 (44%), Gaps = 19/194 (9%)
Query: 18 KGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM---- 73
K +E KE N +++ + + S ++ + +N+ + + + R+ ++ + +G+ M
Sbjct: 3 KPREFKEAYFNKLKDLMAQFPSAFIVNVDNVGSNQMHQIRQALRGKGTVLMGKNTMVRRA 62
Query: 74 ------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELP 127
Q ++ + GN G T+ ++V + + A+ G+ A V +P
Sbjct: 63 IRNILADNPQYERILPLVRGNIGFVFTSGDLKDVRDIITANKVAAPAKAGAFAPLDVYIP 122
Query: 128 EGPLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLG 183
G MEP F + G+P ++ +G +E+VSD + G + A +L LL
Sbjct: 123 AG-----NTGMEPGKTSFFQALGIPTKIARGTIEIVSDMKIVTAGSRVGASEATLLNLLK 177
Query: 184 IKMATFKLHLICRW 197
I T+ + ++ +
Sbjct: 178 ISPFTYGMTVVSIY 191
>gi|358054298|dbj|GAA99224.1| hypothetical protein E5Q_05917 [Mixia osmundae IAM 14324]
Length = 494
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 19/195 (9%)
Query: 18 KGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM---- 73
K K+ K +R VE Y +I+V EN+ + + + R+ ++ ++ +G+ M
Sbjct: 3 KTKDVKAAYFEKLRVLVETYPAIFVVEVENVGSNQMHQIRQALRGKAVVLMGKNTMIRRA 62
Query: 74 ------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELP 127
+ Q + ++ GN G T +EV + + AR G+ A V +
Sbjct: 63 MRGMITEFPQLERFLPYVKGNVGFVFTKSDLKEVRDIIVANKVAAPARAGAYAPLDVSIQ 122
Query: 128 EGPLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLG 183
GP MEP F + G+P ++ +G +E+VS V G + A +L +L
Sbjct: 123 AGP-----TGMEPGKTSFFQALGIPTKIARGAIEIVSVVKVVTAGTRVGASEATLLNMLN 177
Query: 184 IKMATFKLHLICRWS 198
I T+ I +S
Sbjct: 178 ISPFTYGAVPIAVFS 192
>gi|224109342|ref|XP_002315165.1| predicted protein [Populus trichocarpa]
gi|222864205|gb|EEF01336.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMR------YSQAYKVSKFLC- 86
++ Y I + + +N+ + + + R ++ ++ +G+ M +S+ FL
Sbjct: 22 LDEYSQILIAAADNVGSTQLQNIRRGLRGDSVVLMGKNTMMKRSVRIHSEKTGNKAFLNL 81
Query: 87 -----GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 IPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG VE+++ + ++G + A +L LGI+ ++ L ++ +
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSAY 196
>gi|392564258|gb|EIW57436.1| 60S acidic ribosomal protein P0 [Trametes versicolor FP-101664 SS1]
Length = 312
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
+ KE+ ++ V + SI+V + +N+ + + + R ++ ++ +G+ M
Sbjct: 5 RAQKELYFQKLKELVAKFPSIFVVNVDNVGSNQMHQIRVALRGKGVVVMGKNTMVRRALR 64
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
Y Q ++ + GN G T +E+ + + AR G+ A + V +P G
Sbjct: 65 SILSEYPQFERLLPHVRGNIGFVFTGDDLKEIREIITANKVAAPARAGALAPKDVIIPGG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+V+D V G + A +L +L I
Sbjct: 125 -----NTGMEPGKTSFFQALGIPTKIARGTIEIVADVQVVTAGTRVGTSEATLLNMLNIS 179
Query: 186 MATFKLHLICRWSAEDFELYREGLDESDVE 215
T+ + ++ + + E LD SD E
Sbjct: 180 PFTYGMSVVQIFDQGNV-FSPEVLDISDTE 208
>gi|448411817|ref|ZP_21576173.1| acidic ribosomal protein P0 [Halosimplex carlsbadense 2-9-1]
gi|445669751|gb|ELZ22359.1| acidic ribosomal protein P0 [Halosimplex carlsbadense 2-9-1]
Length = 348
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 40/217 (18%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKV----- 81
V + +E+Y S+ + + + + ++ R + + L V R + +V
Sbjct: 18 VADVVEMIESYDSVGIVDITGIPSRQLQDMRRDLYGTAELRVSRNTLMERALAEVDAGLE 77
Query: 82 --SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPEGPLEQ 133
+ ++ G GL TN E+ F Y+ + ++T G A + +PEG
Sbjct: 78 DLTDYVSGQVGLIGTN------ENPFGLYQQLEASKTPAPINAGEVAPNDIVIPEG---D 128
Query: 134 FTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
+ PF L++ G R+ +G ++++SD V E G+ +S + A +L LGI+
Sbjct: 129 TGIDPGPFVGDLQQVGADARIQEGSIQVLSDSTVLETGEEVSNDLANVLNELGIEPKEVG 188
Query: 191 LHLICRWS-------AE---DFELYREGLDESDVESA 217
L L ++ AE D E YR +D+E+A
Sbjct: 189 LDLRAVFADGVLFEPAELELDVEEYR-----ADIEAA 220
>gi|290984558|ref|XP_002674994.1| predicted protein [Naegleria gruberi]
gi|284088587|gb|EFC42250.1| predicted protein [Naegleria gruberi]
Length = 328
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 31/210 (14%)
Query: 12 LSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGR- 70
LSK +K+ + KE V S N ++ Y I N+R+ + + R ++ L +G+
Sbjct: 9 LSKDEKQ--KLKEQYVESFINMLDKYTKIIFVEANNVRSKQMADIRVGLRGKGELLMGKN 66
Query: 71 ------------YPMRY----SQAYKVSK---FLCGNTGLFLTNMPKEEVESLFNKYEDY 111
P +Y +QA ++K L GN GL TN EV+ + Y+
Sbjct: 67 TLMKKAIKVLTSAPEKYKSLAAQAANIAKIADLLKGNVGLVFTNNDLNEVKDVILSYKVG 126
Query: 112 DFARTGSTATEKVELPEGPLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEE 167
A+ G+ + KV ++ +EP F + + ++ KG VE++ + ++
Sbjct: 127 APAKQGAISPVKV-----VIQPANTGLEPTKTSFFQALNINTKITKGTVEIIKEHILLNP 181
Query: 168 GKPLSPESARILRLLGIKMATFKLHLICRW 197
G + A +L+LL IK + L L+ +
Sbjct: 182 GDKVGSSEAALLQLLNIKPFEYGLVLVNIY 211
>gi|189203257|ref|XP_001937964.1| 60S acidic ribosomal protein P0 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985063|gb|EDU50551.1| 60S acidic ribosomal protein P0 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 315
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 19/188 (10%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
KE K + ++ YKSI++ + +N+ + + E R+ ++ ++ +G+ M
Sbjct: 5 KEFKAAYFEKLEALLKEYKSIFIVTVDNVSSQQMHEIRQSLRGEGVVLMGKNTMVRRALK 64
Query: 74 ---RYSQAY-KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
S Y ++ + GN G TN +E + AR G+ A V +P G
Sbjct: 65 GLINDSPEYERLLPHVKGNVGFVFTNADLKETRNKILSNRVAAPARAGAVAPGDVYIPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+ +D + E G + A +L LL I
Sbjct: 125 -----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLIEAGNKVGASEATLLNLLNIS 179
Query: 186 MATFKLHL 193
T+ + +
Sbjct: 180 PFTYGMGI 187
>gi|118487755|gb|ABK95701.1| unknown [Populus trichocarpa]
Length = 322
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMR------YSQAYKVSKFLC- 86
++ Y I + + +N+ + + + R ++ ++ +G+ M +S+ FL
Sbjct: 22 LDEYSQILIAAADNVGSTQLQNIRRGLRGDSVVLMGKNTMMKRSVRIHSEKTGNKTFLNL 81
Query: 87 -----GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 IPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG VE+++ + ++G + A +L LGI+ ++ L ++ +
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVY 196
>gi|268612239|pdb|3A1Y|G Chain G, The Structure Of Protein Complex
Length = 284
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ +++ G+ +TNM ++ + A+ G+ + V +P GP +
Sbjct: 78 KLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAPGPIV 137
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
++ G+P R+ KG V + D V + G+ ++PE A IL LGI+ L ++ +
Sbjct: 138 GQMQALGIPARIEKGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVY-- 195
Query: 200 EDFELY 205
ED +Y
Sbjct: 196 EDGIVY 201
>gi|448636826|ref|ZP_21675274.1| acidic ribosomal protein P0 [Haloarcula sinaiiensis ATCC 33800]
gi|445765132|gb|EMA16271.1| acidic ribosomal protein P0 [Haloarcula sinaiiensis ATCC 33800]
Length = 348
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 87/189 (46%), Gaps = 25/189 (13%)
Query: 21 EHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYK 80
E K+ V++I +E+Y+S+ V + + + + ++ R + + L V R +
Sbjct: 14 EWKQEEVDAIVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERALDD 73
Query: 81 V-------SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELP 127
V + ++ G GL T+ ++ F+ +++ + ++T G A + +P
Sbjct: 74 VDDGLEDLNDYITGQVGLIGTD------DNPFSLFQELEASKTPAPIGAGEVAPNDIVIP 127
Query: 128 EGPLEQFTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
EG + PF L+ G R+ +G ++++SD V + G+ +S E A +L LGI
Sbjct: 128 EG---DTGVDPGPFVGELQSVGADARIQEGSIQVLSDSTVLDTGEEVSQELANVLNELGI 184
Query: 185 KMATFKLHL 193
+ L L
Sbjct: 185 EPKEVGLDL 193
>gi|392572491|gb|EIW65638.1| hypothetical protein TREMEDRAFT_46134 [Tremella mesenterica DSM
1558]
Length = 315
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 85/192 (44%), Gaps = 19/192 (9%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
K KE+ ++ + Y SI++ + +N+ + + R+ ++ ++ +G+ M
Sbjct: 5 KSDKELYFEKLKVLIAEYPSIFLVNIDNVSSQQLHLIRQALRGKGVVLMGKNTMVRRALR 64
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
Y Q ++ + GN G T+ ++V + + AR G+ A V +P G
Sbjct: 65 VIMPDYPQFERLLPHIKGNIGFVFTSGDLKDVREIIISNKVAAPARAGALAPNDVYVPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD V G + A +L +L I
Sbjct: 125 -----NTGMEPGKTSFFQALGIPTKIARGTIEIVSDVQVLTAGGRVGSSEATLLNMLNIS 179
Query: 186 MATFKLHLICRW 197
T+ + ++ +
Sbjct: 180 PFTYGMSVVQVY 191
>gi|171186103|ref|YP_001795022.1| acidic ribosomal protein P0 [Pyrobaculum neutrophilum V24Sta]
gi|170935315|gb|ACB40576.1| ribosomal protein L10 [Pyrobaculum neutrophilum V24Sta]
Length = 341
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 85/182 (46%), Gaps = 8/182 (4%)
Query: 21 EHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIK---PSRLLWVGRYPMRYSQ 77
+ K IV ++ Y+ +++F + + E+R +++ +++ + + +++
Sbjct: 17 QRKTRIVEEATELLKKYQYVFLFDLHGLSSRILNEYRYRLRRYGEVKVIKPTLFKIAFAK 76
Query: 78 AY-----KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLE 132
A+ +V++ + G F TN+ EV + + A+ G A + +P GP
Sbjct: 77 AFGGVPAEVAERVRGEVAFFFTNVNPAEVVKIVAENSVRRAAQPGDKAPFDIVVPAGPTN 136
Query: 133 QFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLH 192
+ K +P R+ +G + + D VV + G+ ++ E A +LR++GI+ +L
Sbjct: 137 ASPGPIISKFGKLKIPTRVQEGKIWIAKDTVVAKAGQEITAEIAEVLRVVGIEPVFEQLR 196
Query: 193 LI 194
L+
Sbjct: 197 LL 198
>gi|344212263|ref|YP_004796583.1| acidic ribosomal protein P0/50S ribosomal protein L10E [Haloarcula
hispanica ATCC 33960]
gi|343783618|gb|AEM57595.1| acidic ribosomal protein P0 / 50S ribosomal protein L10E
[Haloarcula hispanica ATCC 33960]
Length = 347
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 88/189 (46%), Gaps = 25/189 (13%)
Query: 21 EHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYK 80
E K+ V++I +E+Y+S+ V + + + + ++ R + + L V R + +
Sbjct: 14 EWKQEEVDAIVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERALDE 73
Query: 81 V-------SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELP 127
V + ++ G GL T+ ++ F+ +++ + ++T G A + +P
Sbjct: 74 VDDGLEDLNSYITGQVGLIGTD------DNPFSLFQELEASKTPAPIGAGEVAPNDIVIP 127
Query: 128 EGPLEQFTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
EG + PF L+ G R+ +G ++++SD V + G+ +S E A +L LGI
Sbjct: 128 EG---DTGVDPGPFVGELQSVGADARIQEGSIQVLSDSTVLDTGEEVSQELANVLNELGI 184
Query: 185 KMATFKLHL 193
+ L L
Sbjct: 185 EPKEVGLDL 193
>gi|224101117|ref|XP_002312149.1| predicted protein [Populus trichocarpa]
gi|222851969|gb|EEE89516.1| predicted protein [Populus trichocarpa]
Length = 322
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMR------YSQAYKVSKFLC- 86
++ Y I + + +N+ + + + R ++ ++ +G+ M +S+ FL
Sbjct: 22 LDEYSQILIAAADNVGSTQLQNIRRGLRGDSVVLMGKNTMMKRSVRIHSEKTGNKTFLNL 81
Query: 87 -----GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 IPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG VE+++ + ++G + A +L LGI+ ++ L ++ +
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVY 196
>gi|19074504|ref|NP_586010.1| 60S ACIDIC RIBOSOMAL PROTEIN P0 [Encephalitozoon cuniculi GB-M1]
gi|74621170|sp|Q8SRJ7.1|RLA0_ENCCU RecName: Full=60S acidic ribosomal protein P0; Short=A0; AltName:
Full=L10E
Length = 290
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Query: 5 KRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSR 64
KR++ T+K KE KE+ R E Y + EN+ + + K+ + Q +
Sbjct: 16 KREKFFHPGMTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNA 75
Query: 65 LLWVGR-YPMRYSQA-------YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART 116
L +G+ +R + A V + G+ +++ ++ A+
Sbjct: 76 ELLMGKNSAIRRAIADLGKPELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKV 135
Query: 117 GSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESA 176
G+ A V + E + T + + + G+ ++ KG VE++S + V EG + P A
Sbjct: 136 GNVAQRDVWV-ESCITGMTPDKTSYFQALGIATKITKGKVEIISPYKVLSEGDKVGPSQA 194
Query: 177 RILRLLGIKMATFKLHLICRWSAEDFELYREGL 209
+L +L IK +K+ + ++Y +G+
Sbjct: 195 NLLGMLNIKPFCYKMTM--------HQIYEDGV 219
>gi|217073041|gb|ACJ84880.1| unknown [Medicago truncatula]
Length = 323
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-----------RYSQAY-KV 81
++ Y I V + +N+ + + + R+ ++ ++ +G+ M + A+ +
Sbjct: 22 IDEYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNTMMKRSVRMHAEKTGNNAFLNL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 IPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG E+++ + ++G + A +L LGI ++ L ++ +
Sbjct: 141 FQVLNIPTKINKGTAEIITPVELIKKGDKVGSSEAALLAKLGITPFSYGLVVLSVY 196
>gi|14591733|ref|NP_143821.1| acidic ribosomal protein P0 [Pyrococcus horikoshii OT3]
gi|6647747|sp|O74109.1|RLA0_PYRHO RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=50S ribosomal protein L10E; AltName: Full=Anchor
protein P0; AltName: Full=L10E
gi|3258443|dbj|BAA31126.1| 342aa long hypothetical acidic ribosomal protein P0 (L10E)
[Pyrococcus horikoshii OT3]
Length = 342
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ +++ G+ +TNM ++ + A+ G+ + V +P GP +
Sbjct: 78 KLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAPGPIV 137
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
++ G+P R+ KG V + D V + G+ ++PE A IL LGI+ L ++ +
Sbjct: 138 GQMQALGIPARIEKGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVY-- 195
Query: 200 EDFELY 205
ED +Y
Sbjct: 196 EDGIVY 201
>gi|336370597|gb|EGN98937.1| hypothetical protein SERLA73DRAFT_136984 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383378|gb|EGO24527.1| hypothetical protein SERLADRAFT_349321 [Serpula lacrymans var.
lacrymans S7.9]
Length = 311
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
+ KEV +R + Y SI++ + +N+ + + + R ++ ++ +G+ M
Sbjct: 5 RAQKEVYFVKLRELITKYPSIFLVNVDNVGSNQMHQIRVALRGKGVVLMGKNTMVRRALR 64
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
+ Q ++ + GN G T+ +E+ + + AR G+ A + V +P G
Sbjct: 65 SILSEFPQFERLLPHVRGNIGFVFTSSDLKEIREIIIANKVAAPARAGAFAPKDVFVPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD V G + A +L +L I
Sbjct: 125 -----NTGMEPGKTSFFQALGIPTKIARGTIEIVSDVQVVHAGTRVGSSEATLLNMLNIS 179
Query: 186 MATFKLHLI 194
T+ + ++
Sbjct: 180 PFTYGMTVV 188
>gi|147776317|emb|CAN76468.1| hypothetical protein VITISV_030042 [Vitis vinifera]
Length = 303
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 81/184 (44%), Gaps = 12/184 (6%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKVSKFLCGNTGLFL 93
++ Y I + + +N+ + + + R+ ++ ++ +G+ M + + F+C +
Sbjct: 22 LDEYSQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRMIFCLLSFVC-----LV 76
Query: 94 TNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNK 153
P EV KY+ AR G A V +P G F + +P ++NK
Sbjct: 77 VJSPIREVSEEVAKYKVGAPARVGLVAPIDVIVPPGN-TGLDPSQTSFFQVLNIPTKINK 135
Query: 154 GVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW------SAEDFELYRE 207
G VE+++ + ++G + A +L LGI+ ++ L ++ + S E +L E
Sbjct: 136 GTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEE 195
Query: 208 GLDE 211
L E
Sbjct: 196 DLIE 199
>gi|299750019|ref|XP_001836489.2| 60S acidic ribosomal protein P0 [Coprinopsis cinerea okayama7#130]
gi|298408704|gb|EAU85302.2| 60S acidic ribosomal protein P0 [Coprinopsis cinerea okayama7#130]
Length = 394
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 1 MPKSKRDRPVTLSKTKKK---GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFR 57
+P ++ +R S K + KE+ ++ + Y SI++ + +N+ + + + R
Sbjct: 54 LPGAEVNREALFSNLSSKMGASRADKELYFEKLKELLATYPSIFIVNVDNVGSNQMHQIR 113
Query: 58 EQIKPSRLLWVGRYPM----------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNK 107
++ ++ +G+ M Q ++ + GN G T+ +EV +
Sbjct: 114 VALRGKGVVLMGKNTMVRRALRSILAENPQYERLLPHVKGNVGFVFTSEDLKEVREIIVA 173
Query: 108 YEDYDFARTGSTATEKVELPEGPLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFV 163
+ AR G+ A V +P G MEP F + G+P ++ +G +E+VSD
Sbjct: 174 NKVAAPARAGALAPVDVSVPAG-----NTGMEPGKTSFFQALGIPTKIARGTIEIVSDVK 228
Query: 164 VCEEGKPLSPESARILRLLGIKMATFKLHLI 194
V G + P A +L +L I T+ + +I
Sbjct: 229 VVFAGTRVGPSEAALLNMLNISPFTYGMTVI 259
>gi|449329564|gb|AGE95835.1| 60S acidic ribosomal protein P0 [Encephalitozoon cuniculi]
Length = 290
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 27/218 (12%)
Query: 5 KRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSR 64
KR++ T+K KE KE+ R E Y + EN+ + + K+ + Q +
Sbjct: 16 KREKFFHPGMTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNA 75
Query: 65 LLWVGR-YPMRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDF---------- 113
L +G+ +R + A L G + ++ K +V +F K D
Sbjct: 76 ELLMGKNSAIRRAIADLGKPELSG-----VYDLVKGDVCFVFFKGNARDIKKAVDENVRE 130
Query: 114 --ARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPL 171
A+ G+ A V + E + T + + + G+ ++ KG VE++S + V EG +
Sbjct: 131 ACAKVGNVAQRDVWV-ESCITGMTPDKTSYFQALGIATKITKGKVEIISPYKVLSEGDKV 189
Query: 172 SPESARILRLLGIKMATFKLHLICRWSAEDFELYREGL 209
P A +L +L IK +K+ + ++Y +G+
Sbjct: 190 GPSQANLLGMLNIKPFCYKMTM--------HQIYEDGV 219
>gi|392512752|emb|CAD25614.2| 60S ACIDIC RIBOSOMAL PROTEIN P0 [Encephalitozoon cuniculi GB-M1]
Length = 266
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 86/203 (42%), Gaps = 17/203 (8%)
Query: 15 TKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGR-YPM 73
T+K KE KE+ R E Y + EN+ + + K+ + Q + L +G+ +
Sbjct: 2 TRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNSAI 61
Query: 74 RYSQA-------YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVEL 126
R + A V + G+ +++ ++ A+ G+ A V +
Sbjct: 62 RRAIADLGKPELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGNVAQRDVWV 121
Query: 127 PEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKM 186
E + T + + + G+ ++ KG VE++S + V EG + P A +L +L IK
Sbjct: 122 -ESCITGMTPDKTSYFQALGIATKITKGKVEIISPYKVLSEGDKVGPSQANLLGMLNIKP 180
Query: 187 ATFKLHLICRWSAEDFELYREGL 209
+K+ + ++Y +G+
Sbjct: 181 FCYKMTM--------HQIYEDGV 195
>gi|378755382|gb|EHY65409.1| hypothetical protein NERG_01855 [Nematocida sp. 1 ERTm2]
Length = 275
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Query: 81 VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP 140
V K + N G+ TN E+E +F K + + A+ G + V + E T E
Sbjct: 85 VEKVIKNNVGVVFTNGSLSEIEDVFEKNKVHSVAKPGDLSQCDVWI-EPIATGLTPEKTA 143
Query: 141 FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
F + G+ ++ KG +E++S EGK + A +L LLG+ +K+ ++ +S
Sbjct: 144 FFQALGIATKITKGKIEILSKCQALYEGKRVGHSEAALLALLGVTPFVYKMKVLYAYSDG 203
Query: 201 DF 202
F
Sbjct: 204 KF 205
>gi|448414178|ref|ZP_21577317.1| acidic ribosomal protein P0 [Halosarcina pallida JCM 14848]
gi|445682471|gb|ELZ34888.1| acidic ribosomal protein P0 [Halosarcina pallida JCM 14848]
Length = 348
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 40/223 (17%)
Query: 21 EHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYK 80
E K + V+ + + +ENY+S+ V S + + + + R ++ S L + R +
Sbjct: 15 EWKRIEVDELVDFLENYESVGVVSVTGIPSRQLQSMRRELHGSAALRMSRNTLLTRALED 74
Query: 81 V-------SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELP 127
V ++F+ G L TN ++ F Y++ + ++T G A + +P
Sbjct: 75 VNDGLEQLTEFVYGQVALVGTN------DNPFGLYKELEASKTPAPINAGEVAPNDIVIP 128
Query: 128 EGPLEQFTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
EG + PF L++ G R+ G +++ D V +EG+ +S E A +L LGI
Sbjct: 129 EG---DTGVDPGPFVGELQQVGASARIMDGSIKVTEDSHVLDEGEVVSEELANVLAELGI 185
Query: 185 KMATFKLHLICRWS----------AEDFELYREGLDESDVESA 217
+ L L +S A D + YR +D++SA
Sbjct: 186 EPKEVGLDLRGVYSEGVLFEPDELAIDVDEYR-----TDIQSA 223
>gi|407408604|gb|EKF31979.1| 60S acidic ribosomal protein P0 [Trypanosoma cruzi marinkellei]
Length = 323
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 83 KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP-- 140
K LCGNT L TN + ++ +K+ AR G+ A V +P G MEP
Sbjct: 87 KLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCDVIVPAG-----NTGMEPKA 141
Query: 141 --FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
F + + ++ KG VE+VS+ V G + +A +L+ L I +++ + W
Sbjct: 142 TSFFQALNIATKIAKGTVEIVSEKKVLSVGDRVDNSTATLLQKLDISPFYYQVEVQSVW 200
>gi|1710585|sp|P50345.1|RLA0_LUPLU RecName: Full=60S acidic ribosomal protein P0
gi|1143507|emb|CAA63786.1| P0 ribosomal protein [Lupinus luteus]
Length = 322
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 14/194 (7%)
Query: 17 KKGKEHKEVIVNS-IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-- 73
K K K+++ + + ++ Y I V + +N+ + + + R+ ++ ++ +G+ M
Sbjct: 4 KATKAEKKIVYDGKLCQLLDEYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNTMMK 63
Query: 74 ---------RYSQAY-KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEK 123
+QA+ + L GN GL T +EV KY+ A G A
Sbjct: 64 RSVRIHAEKTGNQAFLNLIPLLIGNVGLIFTKGYLKEVSEEVAKYKVGAPACVGLVAPID 123
Query: 124 VELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLG 183
V +P G F + +P ++NKG VE+++ + ++G + A +L LG
Sbjct: 124 VVVPPGN-TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLG 182
Query: 184 IKMATFKLHLICRW 197
I+ ++ L ++ +
Sbjct: 183 IRPFSYGLVVLSVY 196
>gi|448629069|ref|ZP_21672468.1| acidic ribosomal protein P0 [Haloarcula vallismortis ATCC 29715]
gi|445757635|gb|EMA08976.1| acidic ribosomal protein P0 [Haloarcula vallismortis ATCC 29715]
Length = 348
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 88/189 (46%), Gaps = 25/189 (13%)
Query: 21 EHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYK 80
E K+ V++I +E+Y+S+ V + + + + ++ R + + L V R + +
Sbjct: 14 EWKQEEVDAIVAMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERALDE 73
Query: 81 V-------SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELP 127
V + ++ G GL T+ ++ F+ +++ + ++T G A + +P
Sbjct: 74 VDDGLEDLNSYVTGQVGLIGTD------DNPFSLFQELEASKTPAPIGAGEIAPNDIVIP 127
Query: 128 EGPLEQFTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
EG + PF L+ G R+ +G ++++SD V + G+ +S E A +L LGI
Sbjct: 128 EG---DTGVDPGPFVGELQSVGADARIQEGSIQVLSDSTVLDTGEEVSQELANVLNELGI 184
Query: 185 KMATFKLHL 193
+ L L
Sbjct: 185 EPKEVGLDL 193
>gi|294945520|ref|XP_002784721.1| ribosomal P protein, putative [Perkinsus marinus ATCC 50983]
gi|239897906|gb|EER16517.1| ribosomal P protein, putative [Perkinsus marinus ATCC 50983]
Length = 318
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/174 (17%), Positives = 79/174 (45%), Gaps = 12/174 (6%)
Query: 23 KEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------RYS 76
K ++ ++N ++ + I + S +++ + + ++ R ++ ++ +G+ M +Y
Sbjct: 12 KTAYLDRVKNLLDTCEKILIASVDHVGSNQLQQIRIALRGKAIIVMGKNTMLRTALRQYE 71
Query: 77 QAYKVS-----KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPL 131
+ + + GN GL P +E+ + ++++ A+ G A V++P GP
Sbjct: 72 EEHDADLGHLLNVIKGNIGLIFCMAPIDEIREVISQHKVPAMAKAGMVAQCNVDIPAGP- 130
Query: 132 EQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
F + + ++ KG +E+ +D + +G+ ++ +L L I+
Sbjct: 131 TSLDPSQTNFFQALNIATKIVKGSIEISNDVALVTKGQKVTASQQALLMKLNIR 184
>gi|294899254|ref|XP_002776556.1| 60S acidic ribosomal protein P0, putative [Perkinsus marinus ATCC
50983]
gi|239883598|gb|EER08372.1| 60S acidic ribosomal protein P0, putative [Perkinsus marinus ATCC
50983]
Length = 318
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/174 (17%), Positives = 80/174 (45%), Gaps = 12/174 (6%)
Query: 23 KEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------RYS 76
K ++ ++N ++ + I + S +++ + + ++ R ++ ++ +G+ M +Y
Sbjct: 12 KTAYLDRVKNLLDTCEKILIASVDHVGSNQLQQIRIALRGKAIIVMGKNTMLRTALRQYE 71
Query: 77 QAYKVS-----KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPL 131
+ ++ + GN GL P +E+ + ++++ A+ G A V++P GP
Sbjct: 72 EEHEADLGHLLNVIKGNIGLIFCMAPIDEIREVISQHKVPAMAKAGMVAQCNVDIPTGP- 130
Query: 132 EQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
F + + ++ KG +E+ +D + +G+ ++ +L L I+
Sbjct: 131 TSLDPSQTNFFQALNIATKIVKGSIEISNDVALVTKGQKVTASQQALLMKLNIR 184
>gi|146304399|ref|YP_001191715.1| acidic ribosomal protein P0 [Metallosphaera sedula DSM 5348]
gi|145702649|gb|ABP95791.1| LSU ribosomal protein L10P [Metallosphaera sedula DSM 5348]
Length = 329
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 15/190 (7%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQA-------Y 79
V + ++N ++ + + K E R++++ + V + + A
Sbjct: 17 VAELEEKIKNSSTVMIADIQGFPTDKLHEIRKKLRGKAEIKVTKNTLFLIAAKRAGIDVS 76
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ ++ G+ +N + +K++ + G A E+V +P G +
Sbjct: 77 KIENYITGSNAFIFSNDNPFAISIFLSKFKLKRYPMPGDKADEEVVIPAGDTGMTAGPIL 136
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
K + ++ G V +V D V+ + G P+ PE+A IL+ LGI KL L
Sbjct: 137 STFGKLKVQTKVQDGKVHVVKDTVIAKPGDPIPPEAAPILQKLGIMPVYVKLKLKAA--- 193
Query: 200 EDFELYREGL 209
Y EGL
Sbjct: 194 -----YHEGL 198
>gi|448351783|ref|ZP_21540577.1| acidic ribosomal protein P0 [Natrialba taiwanensis DSM 12281]
gi|445632343|gb|ELY85555.1| acidic ribosomal protein P0 [Natrialba taiwanensis DSM 12281]
Length = 351
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 32/212 (15%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKVSKF-- 84
V+ + +ENY+S+ + + + + ++ R + + L V R ++ +A + +
Sbjct: 20 VDDLEALIENYESVGIVGIAGIPSKQLQDMRRDLHGTAELRVSRNTLQV-RALETAGLDD 78
Query: 85 ----LCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPEGPLEQF 134
+ G GL TN ++ F Y++ + ++T G A + +PEG
Sbjct: 79 LVDNVEGQVGLIGTN------DNPFTLYKELEASKTPAPINEGEVAPNDIVIPEG---DT 129
Query: 135 THEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
+ PF L+ G R+ G ++++ D V E G +S + A +L LGI+ L
Sbjct: 130 GVDPGPFVGELQSIGANARIEDGSIQVMEDSTVLEAGGEVSADLANVLNELGIEPKEVGL 189
Query: 192 HL------ICRWSAEDFELYREGLDESDVESA 217
L + ED ++ E ESDV++A
Sbjct: 190 DLRAVVAEGVLFDPEDLDIDIEAY-ESDVQTA 220
>gi|254168992|ref|ZP_04875831.1| ribosomal protein L10, putative [Aciduliprofundum boonei T469]
gi|197622098|gb|EDY34674.1| ribosomal protein L10, putative [Aciduliprofundum boonei T469]
Length = 334
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGR---YPMRYSQAYK--- 80
V+ + E Y + V + N+ + ++ R +K + VG+ + +A K
Sbjct: 12 VDKLAKLAEEYPVVGVVNINNIPAAQMQKMRRNLKDKAVFIVGKNRLIKLALEKANKKNI 71
Query: 81 --VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEM 138
++ ++ G TG+ TN+ ++E L + + A+ G A E + + G M
Sbjct: 72 KDLANYIEGQTGIIFTNINAFKLEKLMEETQTKAPAKGGEIAPEDIIVHAGETPFKPGPM 131
Query: 139 EPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
+K G+P + KG + + D V+ ++G+ +S + A++L L I T L L R +
Sbjct: 132 ISEFQKVGLPAAVQKGKIVIRKDTVLVKKGEVISRDVAQVLTKLEIYPMTVGLDL--RAA 189
Query: 199 AEDFELYREGLDESDVE 215
ED ++ + + D E
Sbjct: 190 YEDEMVFPKDVLHVDTE 206
>gi|330934827|ref|XP_003304726.1| 60S acidic ribosomal protein P0 [Pyrenophora teres f. teres 0-1]
gi|311318608|gb|EFQ87227.1| hypothetical protein PTT_17375 [Pyrenophora teres f. teres 0-1]
Length = 315
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 19/188 (10%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
KE K + ++ YKSI++ + +N+ + + E R+ ++ ++ +G+ M
Sbjct: 5 KEFKAAYFEKLEALLKEYKSIFIVTVDNVSSQQMHEIRQSLRGEGVVLMGKNTMVRRALK 64
Query: 74 ---RYSQAY-KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
S Y ++ + GN G TN +E + AR G+ A V +P G
Sbjct: 65 GLINDSPEYERLLPHVKGNVGFVFTNADLKETRNKILSNRVAAPARAGALAPGDVYIPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+ +D + E G + A +L LL I
Sbjct: 125 -----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLIEAGNKVGASEATLLNLLNIS 179
Query: 186 MATFKLHL 193
T+ + +
Sbjct: 180 PFTYGMGI 187
>gi|255571861|ref|XP_002526873.1| 60S acidic ribosomal protein P0, putative [Ricinus communis]
gi|223533772|gb|EEF35504.1| 60S acidic ribosomal protein P0, putative [Ricinus communis]
Length = 320
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMR------------YSQAYKV 81
++ Y I + + +N+ + + + R ++ ++ +G+ M +
Sbjct: 22 LDEYSQILIVAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRSIRVHADNTGNKTILNL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 IPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG VE+++ + ++G + A +L LGI+ ++ L ++ +
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLIVLSVY 196
>gi|323452332|gb|EGB08206.1| hypothetical protein AURANDRAFT_64196 [Aureococcus anophagefferens]
Length = 888
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLE--QFTHE 137
++S L G L T+ P+ + + +FA G E V L +G L+ ++
Sbjct: 19 QLSGALKGGHALIATDAPRAAIVAALEGCRAPEFATAGFVPDEHVVLEKGDLDVAKYPVS 78
Query: 138 MEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATF 189
M +K MPV + + L+ +F V + KP+S E A++L + +K+ F
Sbjct: 79 MLAVFKKMDMPVEVQDSKLVLIDNFRVASKNKPISAEQAKMLTHMDLKLHEF 130
>gi|375081933|ref|ZP_09729006.1| acidic ribosomal protein P0 [Thermococcus litoralis DSM 5473]
gi|374743373|gb|EHR79738.1| acidic ribosomal protein P0 [Thermococcus litoralis DSM 5473]
Length = 339
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 20/135 (14%)
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDF---------ARTGSTATEKVELPEGP 130
K+ + G G+ +T M N ++ Y F A+ G A + +P GP
Sbjct: 77 KLVDHIQGGAGILVTEM---------NPFKLYKFLEESKKPAPAKPGVLAPRDIVVPAGP 127
Query: 131 LEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
+ ++ G+P R+ KG V + D VV + G+ ++P+ A IL LGI+
Sbjct: 128 TPLSPGPLVGEMQALGIPARIEKGKVSIQKDTVVLKAGEIITPQLANILNQLGIEPLEVG 187
Query: 191 LHLICRWSAEDFELY 205
L L+ + ED +Y
Sbjct: 188 LKLLAAY--EDGIVY 200
>gi|346979404|gb|EGY22856.1| 60S acidic ribosomal protein P0 [Verticillium dahliae VdLs.17]
Length = 312
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 80/180 (44%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY------ 79
+ ++ +E Y SI++ + +N+ + + + R ++ ++ +G+ M R + +
Sbjct: 13 DKLKGLLEEYNSIFIVTVDNVSSQQMHQVRHSLRGDAVVLMGKNTMVRRALKTFIADSPE 72
Query: 80 --KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++ + GN G TN +E+ + AR G+ A V +P G
Sbjct: 73 YERLLPHVKGNVGFVFTNGDLKEIRDKVLANKVAAPARAGAVAPSDVWIPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+ SD + E + A +L LL I T+ L +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEITSDLKLVEANSKVGASEASLLNLLNISPFTYGLGI 187
>gi|388517655|gb|AFK46889.1| unknown [Medicago truncatula]
Length = 323
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-----------RYSQAY-KV 81
++ + I + + +N+ + + + R ++ ++ +G+ M + A+ +
Sbjct: 22 LDKFTQILIVNADNVGSKQLQNIRGGLRGDSVVLMGKNAMMKRSVRMHAEKTGNNAFLNL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 IPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG VE+++ + ++G + A +L LGI+ ++ L ++ +
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVY 196
>gi|254166650|ref|ZP_04873504.1| ribosomal protein L10, putative [Aciduliprofundum boonei T469]
gi|289596536|ref|YP_003483232.1| ribosomal protein L10 [Aciduliprofundum boonei T469]
gi|197624260|gb|EDY36821.1| ribosomal protein L10, putative [Aciduliprofundum boonei T469]
gi|289534323|gb|ADD08670.1| ribosomal protein L10 [Aciduliprofundum boonei T469]
Length = 334
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGR---YPMRYSQAYK--- 80
V+ + E Y + + + N+ + ++ R +K + VG+ + +A K
Sbjct: 12 VDKLAKLAEEYPVVGIVNINNIPAAQMQKMRRNLKDKAVFIVGKNRLIKLALEKANKKNI 71
Query: 81 --VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEM 138
++ ++ G TG+ TN+ ++E L + + A+ G A E + + G M
Sbjct: 72 KDLANYIEGQTGIIFTNINAFKLEKLMEETQTKAPAKGGEIAPEDIIVHAGETPFKPGPM 131
Query: 139 EPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
+K G+P + KG + + D V+ ++G+ +S + A++L L I T L L R +
Sbjct: 132 ISEFQKVGLPAAVQKGKIVIRKDTVLVKKGEVISRDVAQVLTKLEIYPMTVGLDL--RAA 189
Query: 199 AEDFELYREGLDESDVE 215
ED ++ + + D E
Sbjct: 190 YEDEMVFPKDVLHVDTE 206
>gi|402224916|gb|EJU04978.1| hypothetical protein DACRYDRAFT_20548 [Dacryopinax sp. DJM-731 SS1]
Length = 315
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 79/179 (44%), Gaps = 19/179 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-RYSQAYKVSKF---- 84
+R +E Y SI+V + +N+ + + + R ++ ++ +G+ M R + +S+
Sbjct: 15 LRELLETYPSIFVVNVDNVGSNQMHQIRVALRGLGVVLMGKNTMVRRALRSILSEMPHYE 74
Query: 85 -----LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
+ GN G T+ ++V AR G+ A V +P G ME
Sbjct: 75 RLLPHVRGNVGFVFTSGDLKDVRQAITANRVRAPARAGALAPVDVIVPAG-----NTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + +P ++ +G +E+V+D V G + A +L +L I T+ + ++
Sbjct: 130 PGKTSFFQALQIPTKIARGTIEIVADIKVVVAGTRVGSSEATLLNMLNISPFTYGMTVL 188
>gi|730579|sp|P39097.1|RLA0_LEIIN RecName: Full=60S acidic ribosomal protein P0
gi|430759|emb|CAA51264.1| ribosomal PO protein [Leishmania infantum]
gi|430760|emb|CAA51263.1| ribosomal PO protein [Leishmania infantum]
Length = 323
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 84 FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP--- 140
L GNTGL TN +E+ S+ + + AR G+ + V + G + MEP
Sbjct: 88 LLSGNTGLIFTNNAVQEITSVLDAHRVKRAARVGAISPCDVIVAAG-----STGMEPTQT 142
Query: 141 -FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
F + + ++ KG+VE+V++ V G + +A +L+ L I ++++++ W
Sbjct: 143 SFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNSTATLLQKLNISPFYYQVNVLSVW 200
>gi|170098939|ref|XP_001880688.1| 60S acidic ribosomal protein P0 [Laccaria bicolor S238N-H82]
gi|164644213|gb|EDR08463.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 312
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 19/172 (11%)
Query: 37 YKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQAYKVSKFLC 86
Y SI++ + +N+ + + + R ++ ++ +G+ M Y Q ++ ++
Sbjct: 22 YASIFLVNVDNVGSNQMHQIRVALRGKGVVLMGKNTMVRRALRSILAEYPQYERLLPYVK 81
Query: 87 GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP----FL 142
GN G T+ +E+ + + AR G+ A + V +P G MEP F
Sbjct: 82 GNIGFVFTDEDLKEIREIIVANKVAAPARAGAFAPKDVTVPAG-----NTGMEPGKTSFF 136
Query: 143 RKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
+ G+P ++ +G +E+VSD V G + A +L +L I T+ + ++
Sbjct: 137 QALGVPTKIARGTIEIVSDVKVVVAGTRVGTSEATLLNMLNISPFTYGMTVV 188
>gi|15225613|ref|NP_181530.1| 60S acidic ribosomal protein P0-1 [Arabidopsis thaliana]
gi|12229886|sp|O04204.1|RLA01_ARATH RecName: Full=60S acidic ribosomal protein P0-1
gi|2088654|gb|AAB95286.1| 60S acidic ribosomal protein P0 [Arabidopsis thaliana]
gi|25054858|gb|AAN71918.1| putative 60S acidic ribosomal protein P0 [Arabidopsis thaliana]
gi|330254669|gb|AEC09763.1| 60S acidic ribosomal protein P0-1 [Arabidopsis thaliana]
Length = 317
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 83/188 (44%), Gaps = 14/188 (7%)
Query: 17 KKGKEHKEVIVNS-IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-- 73
K K K+++ +S + + Y I V + +N+ + + + R+ ++ ++ +G+ M
Sbjct: 4 KATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMK 63
Query: 74 ---------RYSQAY-KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEK 123
+QA+ + L GN GL T +EV KY+ AR G A
Sbjct: 64 RSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPID 123
Query: 124 VELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLG 183
V + G F + +P ++NKG VE+++ + ++G + A +L LG
Sbjct: 124 VVVQPGN-TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLG 182
Query: 184 IKMATFKL 191
I+ ++ L
Sbjct: 183 IRPFSYGL 190
>gi|333986628|ref|YP_004519235.1| acidic ribosomal protein P0-like protein [Methanobacterium sp.
SWAN-1]
gi|333824772|gb|AEG17434.1| Acidic ribosomal protein P0-like protein [Methanobacterium sp.
SWAN-1]
Length = 335
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 92/206 (44%), Gaps = 17/206 (8%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGR-----YPMRYSQAYKV 81
V ++ +E+++ + + + ++ + ++ R +K + L + R + S+ V
Sbjct: 12 VKDLKELIESHEVVGMANLADIPGPQLQKMRRNLKGNATLKMSRKTFMSLALEESKKANV 71
Query: 82 SKF---LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEM 138
+ + G L TNM ++ + + + A+ GSTA + +P+G +
Sbjct: 72 ASLKDHMKGQPALIFTNMNPFKLYKILEESKTEAPAKPGSTAPFDIVVPKGDTAFKPGPI 131
Query: 139 EPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
L+K G+P +++KG + + D V EG +S E A IL L I + LI +
Sbjct: 132 LGELQKVGIPAKIDKGKIVITKDKTVVAEGDEISREIASILTRLDIHPMEVGIDLIAAY- 190
Query: 199 AEDFELYREGL---DE----SDVESA 217
ED +Y L DE SD++ A
Sbjct: 191 -EDQTVYTSDLLTIDEEKTLSDIQKA 215
>gi|352682979|ref|YP_004893503.1| 50S ribosomal protein L10e [Thermoproteus tenax Kra 1]
gi|350275778|emb|CCC82425.1| 50S ribosomal protein L10e [Thermoproteus tenax Kra 1]
Length = 346
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 32/213 (15%)
Query: 6 RDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRL 65
R RP +KT+ I++ + V++Y I++F + + E+R +++ +
Sbjct: 14 RTRPYPQNKTR---------ILSELEELVKHYNYIFLFDLHELSSRILHEYRYRLRGRAV 64
Query: 66 LWVGRYP-MRYS--QAY-----KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDF---- 113
+ V ++ MR + + Y +V K L G TN E +LF + + +
Sbjct: 65 IKVAKHNLMRLALRRVYGEVPPEVDKELFGERAYIFTN----ENPALFVRIVEANAVRRK 120
Query: 114 ARTGSTATEKVELPEGPLEQFTHEMEPFLRKQG---MPVRLNKGVVELVSDFVVCEEGKP 170
AR G A + P GP P L K G +P R+ +G + + D V + G+
Sbjct: 121 ARGGDVAPYDIIAPAGPTNLSPG---PILSKFGKLKIPTRVQEGKIWIAKDSPVVKAGQQ 177
Query: 171 LSPESARILRLLGIKMATFKLHLI-CRWSAEDF 202
++ E A ILR+LG++ KL L+ W F
Sbjct: 178 ITDEIADILRVLGVEPIYEKLRLLGIIWRGSRF 210
>gi|730578|sp|P39096.1|RLA0_LEICH RecName: Full=60S acidic ribosomal protein P0
gi|459866|gb|AAA29263.1| ribosomal protein P0 [Leishmania chagasi]
Length = 322
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRY---- 75
+E++E +V+ + Y + +N+R+ + + R + +G+ ++
Sbjct: 9 REYEERLVDCLTK----YSCVLFVGMDNVRSQQVHDVRRGCRGKAEFIMGKKTLQAKIVE 64
Query: 76 --SQAYKVS-------------KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTA 120
+QA S L GNTGL TN +E+ S+ + + AR G+
Sbjct: 65 KRAQAKDASPEAKPFNDQCEEYNLLSGNTGLIFTNNAVQEITSVLDGHRVKAPARVGAIP 124
Query: 121 TEKVELPEGPLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESA 176
+ V +P G + MEP F + + ++ KG+VE+V++ V G + +A
Sbjct: 125 CDVV-VPAG-----STGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNSTA 178
Query: 177 RILRLLGIKMATFKLHLICRW 197
+L+ L I ++++++ W
Sbjct: 179 TLLQKLNISPFYYQVNVLSVW 199
>gi|145523487|ref|XP_001447582.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415093|emb|CAK80185.1| unnamed protein product [Paramecium tetraurelia]
Length = 323
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 13/119 (10%)
Query: 85 LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLE------QFTHEM 138
+ G G T+ P +++S+ + + AR G+ A V +P GP QF H +
Sbjct: 100 VAGKVGFVFTDTPVFDLKSVIEENKVETPARVGAVAPIDVVIPPGPTGMDPASIQFFHAL 159
Query: 139 EPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++ KG +++ DFVV + G+ + A +L+ LG K + + ++ +
Sbjct: 160 Q-------IPTKIEKGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKKPFLYGMEVLACY 211
>gi|448648570|ref|ZP_21679701.1| acidic ribosomal protein P0 [Haloarcula californiae ATCC 33799]
gi|445775671|gb|EMA26681.1| acidic ribosomal protein P0 [Haloarcula californiae ATCC 33799]
Length = 345
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 86/189 (45%), Gaps = 25/189 (13%)
Query: 21 EHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYK 80
E K+ V++I +E+Y+S+ V + + + + ++ R + + L V R +
Sbjct: 14 EWKQEEVDAIVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERALDD 73
Query: 81 VSK-------FLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELP 127
V ++ G GL T+ ++ F+ +++ + ++T G A + +P
Sbjct: 74 VDDGLEDLNGYITGQVGLIGTD------DNPFSLFQELEASKTPAPIGAGEVAPNDIVIP 127
Query: 128 EGPLEQFTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
EG + PF L+ G R+ +G ++++SD V + G+ +S E + +L LGI
Sbjct: 128 EG---DTGVDPGPFVGELQSVGADARIQEGSIQVLSDSTVLDTGEEVSQELSNVLNELGI 184
Query: 185 KMATFKLHL 193
+ L L
Sbjct: 185 EPKEVGLDL 193
>gi|357492613|ref|XP_003616595.1| 60S acidic ribosomal protein p0 [Medicago truncatula]
gi|355517930|gb|AES99553.1| 60S acidic ribosomal protein p0 [Medicago truncatula]
Length = 323
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-----------RYSQAY-KV 81
++ + I + + +N+ + + + R ++ ++ +G+ M + A+ +
Sbjct: 22 LDEFTQILIVNADNVGSKQLQNIRGGLRGDSVVLMGKNTMMKRSVRMHAEKTGNNAFLNL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 IPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG VE+++ + ++G + A +L LGI+ ++ L ++ +
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVY 196
>gi|10642|emb|CAA46199.1| ribosomal PO protein [Trypanosoma cruzi]
Length = 321
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 83 KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP-- 140
K LCGNT L TN + ++ +K+ AR G++ + V +P G MEP
Sbjct: 87 KLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGASPCD-VIVPAG-----NTGMEPKA 140
Query: 141 --FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
F + + ++ KG VE+VSD V G + +A +L+ L I +++ + W
Sbjct: 141 TSFFQALNIATKIAKGTVEIVSDKKVLSAGDRVDNSTATLLQKLDISPFYYQVEVQSVW 199
>gi|432328067|ref|YP_007246211.1| ribosomal protein L10 [Aciduliprofundum sp. MAR08-339]
gi|432134776|gb|AGB04045.1| ribosomal protein L10 [Aciduliprofundum sp. MAR08-339]
Length = 332
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 82/182 (45%), Gaps = 8/182 (4%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGR---YPMRYSQAYK--- 80
V+ + ++ Y + + + N+ + ++ R +K + VG+ + ++ K
Sbjct: 12 VDQLVQLMDKYPVVGIVNINNIPAAQMQKMRRDLKDKAVFIVGKNRLIKLALEKSGKKNI 71
Query: 81 --VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEM 138
++ ++ G TG+ T+M ++ L K E A+ G A E + + EG M
Sbjct: 72 KELANYIEGQTGIIFTDMNAFKLAKLLEKTETKAPAKGGEIAPEDIIVHEGETPFKPGPM 131
Query: 139 EPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
+K G+P + KG + + D V+ ++G+ +S + A++L L I T L L +
Sbjct: 132 ISEFQKVGLPAAVQKGKIVIRKDTVLVKKGEVISRDVAQVLTKLEIFPMTVGLDLKAAYE 191
Query: 199 AE 200
E
Sbjct: 192 DE 193
>gi|15825949|pdb|1JJ2|G Chain G, Fully Refined Crystal Structure Of The Haloarcula
Marismortui Large Ribosomal Subunit At 2.4 Angstrom
Resolution
gi|20150994|pdb|1KQS|G Chain G, The Haloarcula Marismortui 50s Complexed With A
Pretranslocational Intermediate In Protein Synthesis
gi|22218928|pdb|1K8A|I Chain I, Co-Crystal Structure Of Carbomycin A Bound To The 50s
Ribosomal Subunit Of Haloarcula Marismortui
gi|22218962|pdb|1K9M|I Chain I, Co-Crystal Structure Of Tylosin Bound To The 50s Ribosomal
Subunit Of Haloarcula Marismortui
gi|22219005|pdb|1KD1|I Chain I, Co-crystal Structure Of Spiramycin Bound To The 50s
Ribosomal Subunit Of Haloarcula Marismortui
gi|22219332|pdb|1M1K|I Chain I, Co-Crystal Structure Of Azithromycin Bound To The 50s
Ribosomal Subunit Of Haloarcula Marismortui
gi|24159027|pdb|1M90|I Chain I, Co-Crystal Structure Of Cca-Phe-Caproic Acid-Biotin And
Sparsomycin Bound To The 50s Ribosomal Subunit
gi|34811124|pdb|1K73|I Chain I, Co-Crystal Structure Of Anisomycin Bound To The 50s
Ribosomal Subunit
gi|34811154|pdb|1KC8|I Chain I, Co-Crystal Structure Of Blasticidin S Bound To The 50s
Ribosomal Subunit
gi|34811193|pdb|1N8R|I Chain I, Structure Of Large Ribosomal Subunit In Complex With
Virginiamycin M
gi|34811223|pdb|1NJI|I Chain I, Structure Of Chloramphenicol Bound To The 50s Ribosomal
Subunit
gi|37927907|pdb|1Q7Y|I Chain I, Crystal Structure Of Ccdap-puromycin Bound At The Peptidyl
Transferase Center Of The 50s Ribosomal Subunit
gi|37927942|pdb|1Q81|I Chain I, Crystal Structure Of Minihelix With 3' Puromycin Bound To
A- Site Of The 50s Ribosomal Subunit.
gi|37927978|pdb|1Q82|I Chain I, Crystal Structure Of Cc-Puromycin Bound To The A-Site Of
The 50s Ribosomal Subunit
gi|37928014|pdb|1Q86|I Chain I, Crystal Structure Of Cca-Phe-Cap-Biotin Bound
Simultaneously At Half Occupancy To Both The A-Site And
P- Site Of The The 50s Ribosomal Subunit.
gi|39654679|pdb|1QVF|G Chain G, Structure Of A Deacylated Trna Minihelix Bound To The E
Site Of The Large Ribosomal Subunit Of Haloarcula
Marismortui
gi|39654712|pdb|1QVG|G Chain G, Structure Of Cca Oligonucleotide Bound To The Trna Binding
Sites Of The Large Ribosomal Subunit Of Haloarcula
Marismortui
gi|50513476|pdb|1S72|G Chain G, Refined Crystal Structure Of The Haloarcula Marismortui
Large Ribosomal Subunit At 2.4 Angstrom Resolution
gi|55670542|pdb|1W2B|G Chain G, Trigger Factor Ribosome Binding Domain In Complex With 50s
gi|66360790|pdb|1YHQ|G Chain G, Crystal Structure Of Azithromycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360823|pdb|1YI2|G Chain G, Crystal Structure Of Erythromycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360856|pdb|1YIJ|G Chain G, Crystal Structure Of Telithromycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360889|pdb|1YIT|G Chain G, Crystal Structure Of Virginiamycin M And S Bound To The
50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360922|pdb|1YJ9|G Chain G, Crystal Structure Of The Mutant 50s Ribosomal Subunit Of
Haloarcula Marismortui Containing A Three Residue
Deletion In L22
gi|66360955|pdb|1YJN|G Chain G, Crystal Structure Of Clindamycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360988|pdb|1YJW|G Chain G, Crystal Structure Of Quinupristin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|83753132|pdb|1VQ4|G Chain G, The Structure Of The Transition State Analogue "daa" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753164|pdb|1VQ5|G Chain G, The Structure Of The Transition State Analogue "raa" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753196|pdb|1VQ6|G Chain G, The Structure Of C-Hpmn And Cca-Phe-Cap-Bio Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753228|pdb|1VQ7|G Chain G, The Structure Of The Transition State Analogue "dca" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753259|pdb|1VQ8|G Chain G, The Structure Of Ccda-Phe-Cap-Bio And The Antibiotic
Sparsomycin Bound To The Large Ribosomal Subunit Of
Haloarcula Marismortui
gi|83753291|pdb|1VQ9|G Chain G, The Structure Of Cca-Phe-Cap-Bio And The Antibiotic
Sparsomycin Bound To The Large Ribosomal Subunit Of
Haloarcula Marismortui
gi|83753322|pdb|1VQK|G Chain G, The Structure Of Ccda-Phe-Cap-Bio Bound To The A Site Of
The Ribosomal Subunit Of Haloarcula Marismortui
gi|83753353|pdb|1VQL|G Chain G, The Structure Of The Transition State Analogue "dcsn"
Bound To The Large Ribosomal Subunit Of Haloarcula
Marismortui
gi|83753384|pdb|1VQM|G Chain G, The Structure Of The Transition State Analogue "dan" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753416|pdb|1VQN|G Chain G, The Structure Of Cc-hpmn And Cca-phe-cap-bio Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753447|pdb|1VQO|G Chain G, The Structure Of Ccpmn Bound To The Large Ribosomal
Subunit Haloarcula Marismortui
gi|83753479|pdb|1VQP|G Chain G, The Structure Of The Transition State Analogue "rap" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|145580179|pdb|2OTJ|G Chain G, 13-Deoxytedanolide Bound To The Large Subunit Of
Haloarcula Marismortui
gi|145580210|pdb|2OTL|G Chain G, Girodazole Bound To The Large Subunit Of Haloarcula
Marismortui
gi|171848843|pdb|2QA4|G Chain G, A More Complete Structure Of The The L7L12 STALK OF THE
Haloarcula Marismortui 50s Large Ribosomal Subunit
gi|206581947|pdb|3CME|G Chain G, The Structure Of Ca And Cca-Phe-Cap-Bio Bound To The Large
Ribosomal Subunit Of Haloarcula Marismortui
gi|208435501|pdb|2QEX|G Chain G, Negamycin Binds To The Wall Of The Nascent Chain Exit
Tunnel Of The 50s Ribosomal Subunit
gi|228311918|pdb|3CXC|G Chain G, The Structure Of An Enhanced Oxazolidinone Inhibitor Bound
To The 50s Ribosomal Subunit Of H. Marismortui
gi|43605|emb|CAA35795.1| unnamed protein product [Haloarcula marismortui]
Length = 348
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 86/189 (45%), Gaps = 25/189 (13%)
Query: 21 EHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYK 80
E K+ V++I +E+Y+S+ V + + + + ++ R + + L V R +
Sbjct: 14 EWKQEEVDAIVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERALDD 73
Query: 81 VSK-------FLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELP 127
V ++ G GL T+ ++ F+ +++ + ++T G A + +P
Sbjct: 74 VDDGLEDLNGYITGQVGLIGTD------DNPFSLFQELEASKTPAPIGAGEVAPNDIVIP 127
Query: 128 EGPLEQFTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
EG + PF L+ G R+ +G ++++SD V + G+ +S E + +L LGI
Sbjct: 128 EG---DTGVDPGPFVGELQSVGADARIQEGSIQVLSDSTVLDTGEEVSQELSNVLNELGI 184
Query: 185 KMATFKLHL 193
+ L L
Sbjct: 185 EPKEVGLDL 193
>gi|429217478|ref|YP_007175468.1| 50S ribosomal protein L10 [Caldisphaera lagunensis DSM 15908]
gi|429134007|gb|AFZ71019.1| ribosomal protein L10 [Caldisphaera lagunensis DSM 15908]
Length = 338
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%)
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ +L + LT+ +V + +K + A+ G+ + +++ +PEG M
Sbjct: 81 KIEPYLKKGVLVILTDTNPFKVSMMLDKLKMPAPAKAGAQSPKEIVVPEGDTNIRPGPMV 140
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
K +P + KG + + SD VV ++G +S E A +L+ LGI+ L+LI W
Sbjct: 141 SVFGKLKIPYEVRKGTIYIKSDTVVAKKGDVISQELASLLQQLGIQPFEIGLNLIIAW 198
>gi|55378200|ref|YP_136050.1| acidic ribosomal protein P0 [Haloarcula marismortui ATCC 43049]
gi|57015347|sp|P15825.2|RLA0_HALMA RecName: Full=50S ribosomal protein L10E; Short=Ribosomal protein
L10; AltName: Full=Acidic ribosomal protein P0 homolog;
AltName: Full=HMal10; AltName: Full=L10E
gi|188596008|pdb|3CC2|G Chain G, The Refined Crystal Structure Of The Haloarcula
Marismortui Large Ribosomal Subunit At 2.4 Angstrom
Resolution With Rrna Sequence For The 23s Rrna And
Genome-Derived Sequences For R-Proteins
gi|188596039|pdb|3CC4|G Chain G, Co-Crystal Structure Of Anisomycin Bound To The 50s
Ribosomal Subunit
gi|188596070|pdb|3CC7|G Chain G, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation C2487u
gi|188596101|pdb|3CCE|G Chain G, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation U2535a
gi|188596132|pdb|3CCJ|G Chain G, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation C2534u
gi|188596163|pdb|3CCL|G Chain G, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation U2535c. Density For Anisomycin Is
Visible But Not Included In Model.
gi|188596194|pdb|3CCM|G Chain G, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2611u
gi|188596225|pdb|3CCQ|G Chain G, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation A2488u
gi|188596256|pdb|3CCR|G Chain G, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation A2488c. Density For Anisomycin Is
Visible But Not Included In The Model.
gi|188596287|pdb|3CCS|G Chain G, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2482a
gi|188596318|pdb|3CCU|G Chain G, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2482c
gi|188596349|pdb|3CCV|G Chain G, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2616a
gi|188596380|pdb|3CD6|G Chain G, Co-cystal Of Large Ribosomal Subunit Mutant G2616a With
Cc-puromycin
gi|194368711|pdb|3CPW|G Chain G, The Structure Of The Antibiotic Linezolid Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|206581914|pdb|3CMA|G Chain G, The Structure Of Cca And Cca-Phe-Cap-Bio Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|228312148|pdb|3G4S|G Chain G, Co-Crystal Structure Of Tiamulin Bound To The Large
Ribosomal Subunit
gi|228312204|pdb|3G6E|G Chain G, Co-Crystal Structure Of Homoharringtonine Bound To The
Large Ribosomal Subunit
gi|228312240|pdb|3G71|G Chain G, Co-crystal Structure Of Bruceantin Bound To The Large
Ribosomal Subunit
gi|290790042|pdb|3I55|G Chain G, Co-Crystal Structure Of Mycalamide A Bound To The Large
Ribosomal Subunit
gi|290790073|pdb|3I56|G Chain G, Co-Crystal Structure Of Triacetyloleandomcyin Bound To The
Large Ribosomal Subunit
gi|55230925|gb|AAV46344.1| 50S ribosomal protein L10E [Haloarcula marismortui ATCC 43049]
Length = 348
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 86/189 (45%), Gaps = 25/189 (13%)
Query: 21 EHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYK 80
E K+ V++I +E+Y+S+ V + + + + ++ R + + L V R +
Sbjct: 14 EWKQEEVDAIVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERALDD 73
Query: 81 VSK-------FLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELP 127
V ++ G GL T+ ++ F+ +++ + ++T G A + +P
Sbjct: 74 VDDGLEDLNGYITGQVGLIGTD------DNPFSLFQELEASKTPAPIGAGEVAPNDIVIP 127
Query: 128 EGPLEQFTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
EG + PF L+ G R+ +G ++++SD V + G+ +S E + +L LGI
Sbjct: 128 EG---DTGVDPGPFVGELQSVGADARIQEGSIQVLSDSTVLDTGEEVSQELSNVLNELGI 184
Query: 185 KMATFKLHL 193
+ L L
Sbjct: 185 EPKEVGLDL 193
>gi|169623979|ref|XP_001805396.1| hypothetical protein SNOG_15237 [Phaeosphaeria nodorum SN15]
gi|111056342|gb|EAT77462.1| hypothetical protein SNOG_15237 [Phaeosphaeria nodorum SN15]
Length = 316
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 90/217 (41%), Gaps = 28/217 (12%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
KE K + ++ YKSI++ + +N+ + + E R+ ++ ++ +G+ M
Sbjct: 5 KEFKVAYFEKLETLLKEYKSIFIVTVDNVSSQQMHEIRQSLRGDGVVLMGKNTMVRRALK 64
Query: 74 ---RYSQAY-KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
S Y ++ + GN G TN +E D + A
Sbjct: 65 GLINDSPEYERLLPHVRGNVGFVFTNADLKETR---------DKILSNRVAAPARAGALA 115
Query: 130 PLEQFT----HEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRL 181
PL+ F MEP F + G+P ++ +G +E+ +D + E G + A +L L
Sbjct: 116 PLDVFVPAGNTGMEPGKTSFFQALGVPTKIARGTIEITADLKLIEAGNKVGASEATLLNL 175
Query: 182 LGIKMATFKLHLICRW-SAEDFELYREGLDESDVESA 217
L I T+ + + + + + FE ++ES + A
Sbjct: 176 LNISPFTYGMGIYQIYDNGQTFEASVLDIEESQLLKA 212
>gi|357145407|ref|XP_003573632.1| PREDICTED: 60S acidic ribosomal protein P0-like [Brachypodium
distachyon]
Length = 323
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 72/170 (42%), Gaps = 13/170 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAYKVSK-------- 83
++ Y + V S ++ + + R I+ ++ +G+ + R + V
Sbjct: 25 LDEYPKVLVASANHVGSTQLAAIRRGIRGESVMLMGKNTLIRRCINVHAVDTGNENIKAL 84
Query: 84 --FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 85 VPLLQGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLIAPIDVVVPAGN-TGLDPTQTSF 143
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
+ +P ++NKG VE++++ + ++G + A +L LGI+ ++ L
Sbjct: 144 FQVLNIPTKINKGTVEIIANVDLIKKGDKVGSSEAALLAKLGIRPFSYGL 193
>gi|363548463|sp|Q971J2.2|RLA0_SULTO RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|342306454|dbj|BAK54543.1| 50S ribosomal protein P0 [Sulfolobus tokodaii str. 7]
Length = 334
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 51/114 (44%)
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ +L G TN E++ +K++ +A G A E+V +P G
Sbjct: 78 KLEPYLTGPNAFIFTNKNPFEIQLFLSKFKLKRYAMPGDKADEEVVIPAGDTGMPAGPAL 137
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
K + ++ G + + D V+ + G P+ P++ IL+ LGI KL++
Sbjct: 138 SIFGKLKIKTKVQDGKIHVTQDTVIAKPGDPIPPDAIPILQKLGIMPVHIKLNI 191
>gi|300122472|emb|CBK23042.2| unnamed protein product [Blastocystis hominis]
Length = 320
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 80/187 (42%), Gaps = 13/187 (6%)
Query: 19 GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----- 73
++ K + + +E Y I+V +++ + + + R+ ++ LL G+ M
Sbjct: 3 ARQKKALYFQKLHQILEEYNKIFVVEIKHVTSKQVADIRKALRGQALLLFGKKTMIRRCM 62
Query: 74 -RYSQAY------KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVEL 126
++ + + K+ + GN GL N V + + AR G A V +
Sbjct: 63 NKFVEEHPGHPIEKLIPLVHGNVGLVFVNGDMANVREIILNNKVPAPARVGVVAHVDVIV 122
Query: 127 PEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKM 186
P GP + F + + ++N+G +E+++D + G+ + P A +L L I
Sbjct: 123 PAGPTGCDPGQTSWF-QALNIATKINRGQIEIINDVPLILAGQKVQPGQAALLDKLNIHP 181
Query: 187 ATFKLHL 193
++ +H+
Sbjct: 182 FSYGMHI 188
>gi|15921650|ref|NP_377319.1| acidic ribosomal protein P0 [Sulfolobus tokodaii str. 7]
Length = 337
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 51/114 (44%)
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ +L G TN E++ +K++ +A G A E+V +P G
Sbjct: 81 KLEPYLTGPNAFIFTNKNPFEIQLFLSKFKLKRYAMPGDKADEEVVIPAGDTGMPAGPAL 140
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
K + ++ G + + D V+ + G P+ P++ IL+ LGI KL++
Sbjct: 141 SIFGKLKIKTKVQDGKIHVTQDTVIAKPGDPIPPDAIPILQKLGIMPVHIKLNI 194
>gi|15229706|ref|NP_187734.1| 60S acidic ribosomal protein P0-3 [Arabidopsis thaliana]
gi|12644551|sp|P57691.1|RLA03_ARATH RecName: Full=60S acidic ribosomal protein P0-3
gi|12321877|gb|AAG50973.1|AC073395_15 60S acidic ribosomal protein, putative; 58619-59992 [Arabidopsis
thaliana]
gi|15810223|gb|AAL07229.1| putative 60S acidic ribosomal protein [Arabidopsis thaliana]
gi|20259595|gb|AAM14140.1| putative 60S acidic ribosomal protein [Arabidopsis thaliana]
gi|332641499|gb|AEE75020.1| 60S acidic ribosomal protein P0-3 [Arabidopsis thaliana]
Length = 323
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 13/170 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMR------------YSQAYKV 81
++ Y I V + +N+ + + + R+ ++ ++ +G+ M + +
Sbjct: 21 IDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENSGNTAILNL 80
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V + G F
Sbjct: 81 LPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGN-TGLDPSQTSF 139
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
+ +P ++NKG VE+++ + ++G + A +L LGI+ ++ L
Sbjct: 140 FQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGL 189
>gi|297829676|ref|XP_002882720.1| 60S acidic ribosomal protein P0 [Arabidopsis lyrata subsp. lyrata]
gi|297328560|gb|EFH58979.1| 60S acidic ribosomal protein P0 [Arabidopsis lyrata subsp. lyrata]
Length = 323
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 13/170 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMR------------YSQAYKV 81
++ Y I V + +N+ + + + R+ ++ ++ +G+ M + +
Sbjct: 21 IDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENTGNTAILNL 80
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V + G F
Sbjct: 81 LPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGN-TGLDPSQTSF 139
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
+ +P ++NKG VE+++ + ++G + A +L LGI+ ++ L
Sbjct: 140 FQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGL 189
>gi|344249855|gb|EGW05959.1| mRNA turnover protein 4-like [Cricetulus griseus]
Length = 57
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIY-VFSFENMRNLKFKEF 56
MP SKRD+ V+L+KT KG E K+ ++ +N V K ++ +FS NMRN K K+
Sbjct: 1 MPTSKRDKKVSLTKTANKGLELKQNLIEEFQNYVGTCKYLFIIFSMANMRNSKLKDI 57
>gi|15232603|ref|NP_187531.1| 60S acidic ribosomal protein P0-2 [Arabidopsis thaliana]
gi|19884289|sp|Q42112.2|RLA02_ARATH RecName: Full=60S acidic ribosomal protein P0-2
gi|6478915|gb|AAF14020.1|AC011436_4 putative 60S acidic ribosomal protein P0 [Arabidopsis thaliana]
gi|13877925|gb|AAK44040.1|AF370225_1 putative 60S acidic ribosomal protein P0 [Arabidopsis thaliana]
gi|16323458|gb|AAL15223.1| putative 60S acidic ribosomal protein P0 [Arabidopsis thaliana]
gi|332641215|gb|AEE74736.1| 60S acidic ribosomal protein P0-2 [Arabidopsis thaliana]
Length = 320
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 13/170 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMR------------YSQAYKV 81
++ Y I V + +N+ + + + R+ ++ ++ +G+ M + +
Sbjct: 21 IDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENTGNTAILNL 80
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V + G F
Sbjct: 81 LPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGN-TGLDPSQTSF 139
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
+ +P ++NKG VE+++ + ++G + A +L LGI+ ++ L
Sbjct: 140 FQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGL 189
>gi|328863558|gb|EGG12657.1| hypothetical protein MELLADRAFT_73814 [Melampsora larici-populina
98AG31]
Length = 310
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 83/190 (43%), Gaps = 19/190 (10%)
Query: 18 KGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM---- 73
K +E K +R+ + + S ++ + +N+ + + + R+ ++ ++ +G+ M
Sbjct: 3 KTREFKAAYFTKLRDLMAEFPSAFIVNVDNVGSNQMHQIRQALRGKGIVLMGKNTMVRRA 62
Query: 74 ------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELP 127
Q ++ + GN G T+ +EV + + A+ G+ A V +P
Sbjct: 63 IRGVLAENPQYERLLPLVKGNIGFVFTSGDLKEVRDIITSNKVAAPAKAGAFAPLDVMVP 122
Query: 128 EGPLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLG 183
G MEP F + G+P ++ +G +E+VSD + G + A +L LL
Sbjct: 123 AG-----NTGMEPGKTSFFQALGIPTKIQRGTIEIVSDIKIVTAGSRVGASEATLLNLLK 177
Query: 184 IKMATFKLHL 193
I T+ + +
Sbjct: 178 ISPFTYGMTV 187
>gi|452824022|gb|EME31028.1| 60S acidic ribosomal protein P0 [Galdieria sulphuraria]
Length = 346
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 90/215 (41%), Gaps = 27/215 (12%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQI 60
MP+S+ DR K + I E + + V +N+ + + ++ R+ +
Sbjct: 1 MPQSRADR--------------KASYFDRIITYFEKFDKVLVIGVDNVGSNQLQKLRQSL 46
Query: 61 KPSRLLWVGRYPM-RYSQAYKVSK---------FLCGNTGLFLTNMPKEEVESLFNKYED 110
+ + +G+ M R + +SK L GN G T+ +++ +
Sbjct: 47 RKDCEVLMGKNTMIRKALRGHLSKNPALEKLLPHLVGNVGFIFTSGDLKQIREKIAENRV 106
Query: 111 YDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKP 170
A+ G+ A V +P GP M F + +P ++NKG +E+ SD + +EG+
Sbjct: 107 PAAAKAGTFAQCDVVIPAGP-TGMEPTMTSFFQALNIPTKINKGQIEIQSDVTLLKEGQR 165
Query: 171 LSPESARILRLLGIKMATFKLHLICRWSAEDFELY 205
+ +L+ L IK FK + + E+ +Y
Sbjct: 166 VGNSEQTLLQKLNIK--PFKYGAVIQVIYENGVIY 198
>gi|21593316|gb|AAM65265.1| 60S acidic ribosomal protein P0-C [Arabidopsis thaliana]
Length = 323
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 13/170 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMR------------YSQAYKV 81
++ Y I V + +N+ + + + R+ ++ ++ +G+ M + +
Sbjct: 21 IDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENSGNTAILNL 80
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V + G F
Sbjct: 81 LPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGN-TGLDPSQTSF 139
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
+ +P ++NKG VE+++ + ++G + A +L LGI+ ++ L
Sbjct: 140 FQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGL 189
>gi|297833676|ref|XP_002884720.1| 60S acidic ribosomal protein P0 [Arabidopsis lyrata subsp. lyrata]
gi|297330560|gb|EFH60979.1| 60S acidic ribosomal protein P0 [Arabidopsis lyrata subsp. lyrata]
Length = 322
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 13/170 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMR------------YSQAYKV 81
++ Y I V + +N+ + + + R+ ++ ++ +G+ M + +
Sbjct: 21 IDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENTGNTAILNL 80
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V + G F
Sbjct: 81 LPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGN-TGLDPSQTSF 139
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
+ +P ++NKG VE+++ + ++G + A +L LGI+ ++ L
Sbjct: 140 FQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGL 189
>gi|288551253|gb|ADC53155.1| putative mRNA turnover protein 4 [Potamophila parviflora]
Length = 30
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 28/30 (93%)
Query: 165 CEEGKPLSPESARILRLLGIKMATFKLHLI 194
CEEGKP+SPE+A+ LRLL ++MATF+L+L+
Sbjct: 1 CEEGKPISPEAAQTLRLLRMQMATFRLYLV 30
>gi|322782525|gb|EFZ10474.1| hypothetical protein SINV_15248 [Solenopsis invicta]
Length = 109
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 16/108 (14%)
Query: 10 VTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLW-- 67
V+L+KT +KG K+ I+ ++ VE Y I++ S +N RN K E R + K S+LL+
Sbjct: 1 VSLTKTNRKGLVLKQRIIEDVKKCVEEYNRIFLISVQNTRNTKLLELRAEWKDSKLLFGK 60
Query: 68 ---------VGRYPMRYSQAYKVSKFL--C---GNTGLFLTNMPKEEV 101
+ + +K++ + C G GL TN K++V
Sbjct: 61 LRIIAMGLGISKETEIAENIHKLANAMKNCSMKGQCGLLFTNRSKKQV 108
>gi|322369370|ref|ZP_08043935.1| acidic ribosomal protein P0 [Haladaptatus paucihalophilus DX253]
gi|320551102|gb|EFW92751.1| acidic ribosomal protein P0 [Haladaptatus paucihalophilus DX253]
Length = 343
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 40/217 (18%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKVS---- 82
V + + VE+Y S+ V + + + + + R + S L V R + V
Sbjct: 20 VAELTDFVESYNSVGVVNITGIPSKQLQNMRRGLHGSAELRVSRNTLVQRALDSVGAGFE 79
Query: 83 ---KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPEGPLEQ 133
+++ G GL TN ++ F Y++ + +++ G A + +PEG
Sbjct: 80 DLEEYVSGQIGLIGTN------DNPFGLYKELEASKSPAPISAGEIAPNDILIPEG---D 130
Query: 134 FTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
+ PF L++ G R+ G + + D +V EEG +S E A +L LG++
Sbjct: 131 TGVDPGPFVGELQQAGASARIMDGSIHVTEDSLVAEEGDEVSEELANVLSELGMEPKEVG 190
Query: 191 LHLICRWS----------AEDFELYREGLDESDVESA 217
L L +S A D + YR +D+E+A
Sbjct: 191 LDLRAVYSDGVMFESDELAIDVDEYR-----TDIETA 222
>gi|326578111|gb|ADZ95699.1| 60S ribosomal protein P0 [Nosema bombycis]
Length = 263
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 87 GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQG 146
GN + + +EV+ + E A+ G + V + +G + T + + + G
Sbjct: 79 GNISIVFFSKDIKEVKKKIDDNERESVAKIGDISQRDVWI-KGHITSMTSDKTGYFQTLG 137
Query: 147 MPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDF 202
+P ++ KG +E++ DF V G + P +L L+ IK +K++++ + +F
Sbjct: 138 IPTKITKGKIEIMQDFKVLSPGDKVGPSQVNLLALINIKPFRYKMNILNIYEEGEF 193
>gi|326435971|gb|EGD81541.1| arbp-prov protein [Salpingoeca sp. ATCC 50818]
Length = 311
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
Query: 37 YKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRY-------SQAY-KVSKFLCGN 88
Y I + + +N+ + + + R ++ S + G+ M + AY ++ + GN
Sbjct: 24 YPKILIVNCDNVGSKQLQNIRLALRGSCEILFGKNTMMRRAIMQTENTAYAELLPHIKGN 83
Query: 89 TGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMP 148
G T+ + L ++ AR G+ A ++V +P+GP + F + +
Sbjct: 84 VGFIFTHDDLAGIRDLLLNFKVAAPARVGAIAPDEVVVPKGP-TGLDAQKTSFFQALNIQ 142
Query: 149 VRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
++ +G +E+V+D + ++ + P A +L +LGI ++ L
Sbjct: 143 TKIARGAIEIVNDVKLLQKDDRVGPSEAALLNMLGISPFSYGL 185
>gi|255941106|ref|XP_002561322.1| Pc16g10120 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585945|emb|CAP93682.1| Pc16g10120 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 312
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R+ + Y +I++ +N+ + + E R ++ ++ +G+ M R + +
Sbjct: 15 LRSLLNEYSTIFIVGVDNVSSQQMHEIRISLRGEAVVLMGKNTMVRRALKGFVSENPEWE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
++ + GN G TN + + AR G+ A + V +P G ME
Sbjct: 75 RLLPHVRGNVGFIFTNGDLKGTKEKILANRVAAPARAGAVAPDDVWIPGG-----NTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
P F + G+P ++ +G +E+VSD + E G + A +L LL I T+ + +
Sbjct: 130 PGKTAFFQALGVPTKIARGTIEIVSDLKLVEAGNKVGASEATLLNLLNISPFTYGMTI 187
>gi|121543573|gb|ABM55512.1| putative ribosomal protein P0 [Maconellicoccus hirsutus]
Length = 317
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 77/177 (43%), Gaps = 21/177 (11%)
Query: 32 NAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQAYKV 81
N ++ Y ++ +N+ + + ++ R ++ S ++ +G+ M R ++
Sbjct: 19 NLLDEYPKCFIVGADNVGSKQMQQIRISLRGSGIVLMGKNTMMRKAIRGHIERNPALERL 78
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE-----GPLEQFTH 136
F+ GN G T E+ + + AR G+ A V +P GP
Sbjct: 79 LPFIKGNVGFVFTRSDLVEIREKLLENKVQAPARAGAIAPCPVVIPAQNTGLGP------ 132
Query: 137 EMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
E F + +P +++KG +E+++D + +EG + A +L +L I ++ L +
Sbjct: 133 EKTSFFQALSIPTKISKGTIEIINDVHILKEGDKVGASEATLLNMLNISPFSYGLGV 189
>gi|440492542|gb|ELQ75098.1| 60S acidic ribosomal protein P0 [Trachipleistophora hominis]
Length = 351
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/211 (18%), Positives = 86/211 (40%), Gaps = 21/211 (9%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAY 79
KE K+++ + ++ Y + N+ + Q++ ++ W G+ + +
Sbjct: 97 KERKQLLFSRTKDYFTQYSQFIIVGLNNVTS-------SQLQSAKQAWHGKAEFLFGKNT 149
Query: 80 KVSKFL------------CGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELP 127
V K L GN TN E++ + + FA+ G+ A V +
Sbjct: 150 TVKKALRDMGHDDIVSRIFGNVAFIFTNGDVREIKHIVEDNKRNTFAKVGAIAQTDVWI- 208
Query: 128 EGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMA 187
E + + F + G+ ++ KG VE++ + G+ ++P A +L ++ I+
Sbjct: 209 EKKVTNMGPDKTSFFQALGISTKITKGKVEIIQNSKALTAGEKVTPSQANLLAIMDIQPF 268
Query: 188 TFKLHLICRWSAEDF-ELYREGLDESDVESA 217
+ + + + + F E + + + DVE +
Sbjct: 269 VYAMKMESIYGDKQFYEPWIADITDKDVEDS 299
>gi|443898962|dbj|GAC76295.1| 60S acidic ribosomal protein P0 [Pseudozyma antarctica T-34]
Length = 313
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 19/189 (10%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-RYSQA 78
+ KE + + +E Y SI++ + +N+ + + + R+ ++ ++ +G+ M R +
Sbjct: 6 RATKEAWFDKLTELLEKYPSIFIVNIDNVSSQQMHQIRQSLRGKGVVLMGKNTMARRALR 65
Query: 79 YKVSK---------FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
V L GN G T+ ++V L AR G+ A E + + G
Sbjct: 66 MLVGDNPDYERLLPHLKGNIGFVFTSGDLKDVRDLILSNRVAAPARAGAYAPEDIFVKAG 125
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD V + G + A +L +L I
Sbjct: 126 -----NTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNRVGTSEATLLNMLNIS 180
Query: 186 MATFKLHLI 194
T+ + ++
Sbjct: 181 PFTYGMTVV 189
>gi|448364834|ref|ZP_21553410.1| acidic ribosomal protein P0 [Natrialba aegyptia DSM 13077]
gi|445657467|gb|ELZ10294.1| acidic ribosomal protein P0 [Natrialba aegyptia DSM 13077]
Length = 348
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 32/212 (15%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKVSKF-- 84
V + +ENY+S+ + + + + ++ R + + L V R ++ +A + +
Sbjct: 20 VADLEALIENYESVGIVGIAGIPSKQLQDMRRDLHGTAELRVSRNTLQV-RALETAGLDD 78
Query: 85 ----LCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPEGPLEQF 134
+ G GL TN ++ F Y++ + ++T G A + +PEG
Sbjct: 79 LVDDVEGQVGLIGTN------DNPFALYKELEASKTPAPINEGEVAPNDIVIPEG---DT 129
Query: 135 THEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
+ PF L+ G R+ G ++++ D V E G +S + A +L LGI+ L
Sbjct: 130 GVDPGPFVGELQSIGANARIEDGSIQVMEDSTVLEAGGEVSADLANVLNELGIEPKEVGL 189
Query: 192 HLIC------RWSAEDFELYREGLDESDVESA 217
L + ED ++ E ESDV++A
Sbjct: 190 DLRAVVAEGVLFDPEDLDIDIEAY-ESDVQTA 220
>gi|448362536|ref|ZP_21551142.1| acidic ribosomal protein P0 [Natrialba asiatica DSM 12278]
gi|445648016|gb|ELZ00980.1| acidic ribosomal protein P0 [Natrialba asiatica DSM 12278]
Length = 348
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 32/212 (15%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKVSKF-- 84
V + +ENY+S+ + + + + ++ R + + L V R ++ +A + +
Sbjct: 20 VADLEALIENYESVGIVGIAGIPSKQLQDMRRDLHGTAELRVSRNTLQV-RALETAGLDD 78
Query: 85 ----LCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPEGPLEQF 134
+ G GL TN ++ F Y++ + ++T G A + +PEG
Sbjct: 79 LVDDVEGQVGLIGTN------DNPFALYKELEASKTPAPINEGEVAPNDIVIPEG---DT 129
Query: 135 THEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
+ PF L+ G R+ G ++++ D V E G +S + A +L LGI+ L
Sbjct: 130 GVDPGPFVGELQSIGANARIEDGSIQVMEDSTVLEAGGEVSADLANVLNELGIEPKEVGL 189
Query: 192 HLIC------RWSAEDFELYREGLDESDVESA 217
L + ED ++ E ESDV++A
Sbjct: 190 DLRAVVAEGVLFDPEDLDIDIEAY-ESDVQTA 220
>gi|444706055|gb|ELW47417.1| mRNA turnover protein 4 like protein [Tupaia chinensis]
Length = 145
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 154 GVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
VV L+S + VC EG L+PE ARIL+L G +MA FK+ + W+
Sbjct: 38 AVVTLLSHYEVCREGDVLTPEQARILKLSGYQMAEFKVAMKYMWN 82
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFS 44
MPKSKRD+ V+L+KT KKG E K+ ++ +R +V+ + + S
Sbjct: 1 MPKSKRDKNVSLTKTTKKGLERKQNLIEELRESVDMSAVVTLLS 44
>gi|41614888|ref|NP_963386.1| acidic ribosomal protein P0 [Nanoarchaeum equitans Kin4-M]
gi|40068612|gb|AAR38947.1| NEQ091 [Nanoarchaeum equitans Kin4-M]
Length = 284
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 89 TGLFL-TNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGM 147
T L L TN ++ +F +++ + G A + + +P+G ++ LR G+
Sbjct: 80 TALLLSTNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTELRALGV 139
Query: 148 PVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLIC 195
++ G +E+V D VV +EG+ +SP+ A +L+ LGIK ++ LI
Sbjct: 140 KTKVTSGKIEIVEDAVVVKEGEIVSPKVANVLQTLGIKPIERQVTLIA 187
>gi|192910684|gb|ACF06450.1| ribosomal protein L10 [Elaeis guineensis]
Length = 321
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 85/195 (43%), Gaps = 20/195 (10%)
Query: 10 VTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVG 69
V LSK++KK + K++ ++ Y + + + +N+ + + + R+ ++ ++ +G
Sbjct: 3 VKLSKSEKKIEYDKKLC-----RLLDEYSQVLIAAADNVGSNQLQNIRKGLRGDSVVLMG 57
Query: 70 RYPMRYSQAYKVSK-------------FLCGNTGLFLTNMPKEEVESLFNKYEDYDFART 116
+ + + K+ L GN GL T +EV KY+ AR
Sbjct: 58 KNTL-IRRCIKIHAEKTGNKDYLNLLPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARV 116
Query: 117 GSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESA 176
G A V +P G F + +P ++NKG VE+++ + +G + A
Sbjct: 117 GLVAPIDVVVPPGN-TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEA 175
Query: 177 RILRLLGIKMATFKL 191
+L LGI+ ++ L
Sbjct: 176 ALLAKLGIRPFSYGL 190
>gi|238883268|gb|EEQ46906.1| 60S acidic ribosomal protein P0 [Candida albicans WO-1]
Length = 275
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 9/119 (7%)
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ F+ GN G TN + + + AR G+ A + V +P G ME
Sbjct: 38 KLLPFIKGNVGFIFTNGDLKSIRDIVVSNVVAAPARAGAVAPKDVWIPAG-----NTGME 92
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
P F + G+P ++ +G +E+VSD V E+ + P A +L +L I T+ + ++
Sbjct: 93 PGKTSFFQALGVPTKIARGTIEIVSDVKVVEQDAKVGPSEATLLNMLNISPFTYGMSVV 151
>gi|300175339|emb|CBK20650.2| unnamed protein product [Blastocystis hominis]
Length = 588
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 80/188 (42%), Gaps = 13/188 (6%)
Query: 18 KGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM---- 73
++ K + + +E Y I+V +++ + + + R+ ++ LL G+ M
Sbjct: 2 SARQKKALYFQKLHQILEEYNKIFVVEIKHVTSKQVADIRKALRGQALLLFGKKTMIRRC 61
Query: 74 --RYSQAY------KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVE 125
++ + + K+ + GN GL N V + + AR G A V
Sbjct: 62 MNKFVEEHPGHPIEKLIPLVHGNVGLVFVNGDMANVREIILNNKVPAPARVGVVAHVDVI 121
Query: 126 LPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
+P GP + F + + ++N+G +E+++D + G+ + P A +L L I
Sbjct: 122 VPAGPTGCDPGQTSWF-QALNIATKINRGQIEIINDVPLILAGQKVQPGQAALLDKLNIH 180
Query: 186 MATFKLHL 193
++ +H+
Sbjct: 181 PFSYGMHI 188
>gi|297736637|emb|CBI25508.3| unnamed protein product [Vitis vinifera]
Length = 292
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 15/138 (10%)
Query: 84 FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP--- 140
L GN GL T +EV KY+ AR G A V +P G ++P
Sbjct: 56 LLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPPG-----NTGLDPSQT 110
Query: 141 -FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW-- 197
F + +P ++NKG VE+++ + ++G + A +L LGI+ ++ L ++ +
Sbjct: 111 SFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDN 170
Query: 198 ----SAEDFELYREGLDE 211
S E +L E L E
Sbjct: 171 GSVFSPEVLDLTEEDLIE 188
>gi|325959972|ref|YP_004291438.1| acidic ribosomal protein P0 [Methanobacterium sp. AL-21]
gi|325331404|gb|ADZ10466.1| Acidic ribosomal protein P0-like protein [Methanobacterium sp.
AL-21]
Length = 333
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 82/182 (45%), Gaps = 8/182 (4%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--------RYSQA 78
V ++++ + +Y+ + + + ++ + ++ R +K S L + R + +Q
Sbjct: 12 VANLKDLINSYEVVGMANLADIPAPQLQQMRRTLKDSATLKMSRKTLMSLALNDSEKAQI 71
Query: 79 YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEM 138
+ ++ G L TNM ++ + + A+ GS A E + +P+G +
Sbjct: 72 ENLEDYMEGQPALIFTNMNPFKLYKILESSKTPAPAKAGSIAPEDIIVPKGDTAFKPGPV 131
Query: 139 EPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
L+K G+P ++ KG + + +D V+ E G+ + + A IL L I + L +
Sbjct: 132 LGELQKAGIPAKIEKGKIVITNDKVIVEAGEVIPRDVASILTRLEIFPLEVGIDLRAAYE 191
Query: 199 AE 200
AE
Sbjct: 192 AE 193
>gi|409730145|ref|ZP_11271735.1| acidic ribosomal protein P0 [Halococcus hamelinensis 100A6]
gi|448722626|ref|ZP_21705159.1| acidic ribosomal protein P0 [Halococcus hamelinensis 100A6]
gi|445789051|gb|EMA39744.1| acidic ribosomal protein P0 [Halococcus hamelinensis 100A6]
Length = 350
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 90/217 (41%), Gaps = 40/217 (18%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM---RYSQAYKVSK 83
V + + + +Y+SI + S + + + + R ++ S L V R + +A +
Sbjct: 25 VTDLADLIASYESIGIVSVAGIPSRQLQAMRRDLQGSARLRVARNTLLTRALDEADEGVD 84
Query: 84 FLC----GNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPEGPLEQ 133
L G GL TN E+ F Y + ++T G + + +PEG
Sbjct: 85 DLVDEVDGQVGLIGTN------ENPFGLYRQLEASKTPAPINAGEVSPNDITIPEG---D 135
Query: 134 FTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
+ PF L++ G R+ G +++ D V EEG+ +S A +L LGI+
Sbjct: 136 TGIDPGPFVGELQQVGAEARIMDGSIQVTDDSTVLEEGEEVSQALANVLSELGIEPKEVG 195
Query: 191 LHLICRWS----------AEDFELYREGLDESDVESA 217
L L ++ A D + YR +D+ESA
Sbjct: 196 LDLRTVYADGTLFEADELAIDIDEYR-----ADIESA 227
>gi|22759727|dbj|BAC10912.1| putative 60S acidic ribosomal protein P0 [Zinnia elegans]
Length = 203
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 83/185 (44%), Gaps = 15/185 (8%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-----------RYSQAY-KV 81
+++Y + V + +N+ + + + R+ ++ ++ +G+ M ++AY +
Sbjct: 21 LDDYNQVLVAAADNVGSNQLQNIRQGLRGDSVILMGKNTMMKRSIRMHSEKTGNKAYLNL 80
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 81 IPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGN-TGLDPSQTSF 139
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAED 201
+ +P ++NKG VE+++ + ++G + A +L LGI+ F L+ + E+
Sbjct: 140 FQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIR--PFSYGLVVQSVYEN 197
Query: 202 FELYR 206
+++
Sbjct: 198 GSVFK 202
>gi|145525288|ref|XP_001448466.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416010|emb|CAK81069.1| unnamed protein product [Paramecium tetraurelia]
Length = 323
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Query: 85 LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLE------QFTHEM 138
+ G G T+ P +++ + + + AR G+ A V +P GP QF H +
Sbjct: 100 VAGKVGFIFTDTPVFDLKPIIEENKVETPARVGAVAPIDVVIPPGPTGMDPASIQFFHAL 159
Query: 139 EPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
+ +P ++ KG +++ DFVV + G+ + A +L+ LG K + + ++ +
Sbjct: 160 Q-------IPTKIEKGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKKPFLYGMEVLACYD 212
>gi|242088805|ref|XP_002440235.1| hypothetical protein SORBIDRAFT_09g028230 [Sorghum bicolor]
gi|241945520|gb|EES18665.1| hypothetical protein SORBIDRAFT_09g028230 [Sorghum bicolor]
Length = 319
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 83/196 (42%), Gaps = 19/196 (9%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAYK----------V 81
++ Y + V +N+ + + ++ R ++ ++ +G+ + R + Y +
Sbjct: 22 LDEYTKVLVALADNVGSKQLQDIRRGLRGDSIVLMGKNTLIRRCIKVYAEKTGNNAFDPL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V + G F
Sbjct: 82 MDLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVSPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI------C 195
+ +P ++NKG VE+++ + ++G + + +L LGI+ ++ L ++
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLQIVNVYEDGS 200
Query: 196 RWSAEDFELYREGLDE 211
+S E +L E L E
Sbjct: 201 VFSPEVLDLTEEDLVE 216
>gi|325187541|emb|CCA22079.1| 60S acidic ribosomal protein P0 putative [Albugo laibachii Nc14]
Length = 318
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 81/185 (43%), Gaps = 31/185 (16%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGR-----------------YPMRYS 76
+E + I++ S +N+R+ + ++ R+ ++ + +G+ +P+
Sbjct: 19 LETFTKIFLVSVDNVRSKQMQQIRQSLRGRAEILMGKNTLMRKVFGNFLRKNPNHPLEM- 77
Query: 77 QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTH 136
V + GN G TN ++ S+ AR G+ A V +P G +
Sbjct: 78 ----VVPLIRGNIGFVFTNDDLNDIRSVLESNRVPAPARVGAVAPADVVVPPG-----ST 128
Query: 137 EMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLH 192
+P F + + ++ KG +E+VS+ ++ +EG+ + A +L+ L I ++ L
Sbjct: 129 GCDPGQTSFFQALQIATKIQKGQIEIVSEVLLIKEGEKVGNSEAALLQKLNINPFSYGLV 188
Query: 193 LICRW 197
L+ +
Sbjct: 189 LVSVY 193
>gi|48477511|ref|YP_023217.1| acidic ribosomal protein P0 [Picrophilus torridus DSM 9790]
gi|73917555|sp|Q6L1X8.1|RLA0_PICTO RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|48430159|gb|AAT43024.1| large subunit ribosomal protein L10P [Picrophilus torridus DSM
9790]
Length = 315
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 81/187 (43%), Gaps = 24/187 (12%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKP--------SRLLWVGRYPMRYSQA 78
V ++ N + + K + S + +RN +F++ R I+ +RLL + +
Sbjct: 12 VKNLENEINSRKVAAIVSIKGLRNNEFQKIRNSIRDKARIKVSRARLLRLAIENTGKNNI 71
Query: 79 YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVEL-------PEGP- 130
K+ + G L T+ +++ + K + A+ G A E + + P GP
Sbjct: 72 VKLKDYAHGQVALITTDESPKKIYDILEKSKTKAPAKGGEIAEEDIVIEPKETNFPPGPK 131
Query: 131 LEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
+ +F +K G+P + KG + + S+ ++G ++ E A +L+ L I T
Sbjct: 132 ISEF--------QKAGLPAAIEKGKIVIKSEVTFVKKGDVITREKALVLKDLEIYPITAG 183
Query: 191 LHLICRW 197
L LI +
Sbjct: 184 LDLIAAY 190
>gi|294868296|ref|XP_002765467.1| ribosomal P protein, putative [Perkinsus marinus ATCC 50983]
gi|239865510|gb|EEQ98184.1| ribosomal P protein, putative [Perkinsus marinus ATCC 50983]
Length = 318
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/174 (16%), Positives = 78/174 (44%), Gaps = 12/174 (6%)
Query: 23 KEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------RYS 76
K ++ +++ ++ + I + S +++ + + ++ R ++ ++ +G+ M +Y
Sbjct: 12 KTAYLDRVKDLLDTCEKILIASVDHVGSNQLQQIRIGLRGKAIIVMGKNTMLRTALRQYE 71
Query: 77 QAYKVS-----KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPL 131
+ + + GN GL P +E+ + ++++ A+ G A V++P GP
Sbjct: 72 EEHDADLGHLLNVIKGNIGLIFCMAPIDEIREIISQHKVPAMAKAGMVAQCNVDIPAGP- 130
Query: 132 EQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
F + + ++ KG +E+ +D + +G ++ +L L I+
Sbjct: 131 TSLDPSQTNFFQALNIATKIVKGSIEISNDVALVTKGSKVTASQQALLMKLNIR 184
>gi|393241589|gb|EJD49111.1| hypothetical protein AURDEDRAFT_112794 [Auricularia delicata
TFB-10046 SS5]
Length = 313
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 85/193 (44%), Gaps = 19/193 (9%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
+ KE ++ + Y SI++ + +N+ + + + R ++ ++ +G+ M
Sbjct: 5 RSEKEAYFVKLKELIAEYPSIFLVNVDNVGSNQMHQIRVSLRGKGVVLMGKNTMVRRALR 64
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
+ Q ++ + GN G T+ +EV L + AR G+ A + V +P G
Sbjct: 65 SVLAEFPQLERLLPHVKGNIGFVFTSGDLKEVRELIISNKVAAPARAGAFAPKDVIIPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD V + A +L +L I
Sbjct: 125 -----NTMMEPGKTSFFQALGIPTKIARGTIEIVSDVKVVSASTRVGQSEATLLNMLNIS 179
Query: 186 MATFKLHLICRWS 198
T+ + ++ +S
Sbjct: 180 PFTYGMSVVQIFS 192
>gi|302414632|ref|XP_003005148.1| 60S acidic ribosomal protein P0 [Verticillium albo-atrum VaMs.102]
gi|261356217|gb|EEY18645.1| 60S acidic ribosomal protein P0 [Verticillium albo-atrum VaMs.102]
Length = 313
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 80/180 (44%), Gaps = 19/180 (10%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY------ 79
+ ++ +E Y SI++ + +N+ + + + R ++ ++ +G+ M R + +
Sbjct: 13 DKLKGLLEEYNSIFIVTVDNVSSQQMHQVRHSLRGDAVVLMGKNTMVRRALKTFIADSPE 72
Query: 80 --KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
++ + GN G TN +++ + AR G+ A V +P G
Sbjct: 73 YERLLPHVKGNVGFVFTNGDLKDIRDKVLANKVAAPARAGAVAPSDVWIPAG-----NTG 127
Query: 138 MEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
MEP F + G+P ++ +G +E+ +D + E + A +L LL I T+ L +
Sbjct: 128 MEPGKTSFFQALGVPTKIARGTIEITTDLKLVEANSKVGASEASLLNLLNISPFTYGLGI 187
>gi|308810998|ref|XP_003082807.1| RLA0_MAIZE 60S acidic ribosomal protein P0 pir||T03944 acidic
ribosomal protein P0-maize (ISS) [Ostreococcus tauri]
gi|116054685|emb|CAL56762.1| RLA0_MAIZE 60S acidic ribosomal protein P0 pir||T03944 acidic
ribosomal protein P0-maize (ISS) [Ostreococcus tauri]
Length = 321
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 85 LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP---- 140
L GN G+ T EV ++ AR G+ A +V +P GP MEP
Sbjct: 90 LVGNVGIIFTKGDLLEVRKKVKQFVVPAPARVGAIAPVEVVVPAGP-----TGMEPSQTS 144
Query: 141 FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARIL 179
F + + ++NKG +E+++D VV + G +S +A +L
Sbjct: 145 FFQTLNIATKINKGSIEILNDIVVLKVGDRVSSSAAALL 183
>gi|346464737|gb|AEO32213.1| hypothetical protein [Amblyomma maculatum]
Length = 263
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 10 VTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVG 69
+ L+K +KK + K++ + ++ Y + + +N+ + + + R+ ++ ++ +G
Sbjct: 3 IKLTKAQKKVQYDKKLC-----SLLDQYSQVLIALADNVGSNQLQNIRKGLRGDSVVLMG 57
Query: 70 RYPM------------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTG 117
+ + + + L GN GL T +E+ KY+ AR G
Sbjct: 58 KNTLIRRCIKLHAENSGNANYLNLLPLLVGNVGLIFTKGDLKEISEEVAKYKVGAPARVG 117
Query: 118 STATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESAR 177
A V +P G F + +P ++NKG VE+++ + ++G + A
Sbjct: 118 LVAPIDVIVPPGN-TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAA 176
Query: 178 ILRLLGIKMATFKLHLICRW------SAEDFELYREGLDE 211
+L LGI+ ++ L + + S E +L E L E
Sbjct: 177 LLAKLGIRPFSYGLVVTSVYDNGSVFSPEVLDLTEEDLIE 216
>gi|327311565|ref|YP_004338462.1| 50S ribosomal protein L10 [Thermoproteus uzoniensis 768-20]
gi|326948044|gb|AEA13150.1| ribosomal protein L10 [Thermoproteus uzoniensis 768-20]
Length = 343
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 89/213 (41%), Gaps = 32/213 (15%)
Query: 6 RDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRL 65
R+RP K K I + + V++Y I+VF + E+R +++ +
Sbjct: 12 RERPYPQKKAK---------IASELEELVKSYNYIFVFDLHGLSARILHEYRFRLRGKGV 62
Query: 66 LWVGRYP-MRYS--QAY-----KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDF---- 113
+ V ++ MR + + Y V + L G TN E +LF K +
Sbjct: 63 VKVAKHNLMRIALKRVYGEVPPDVDRELFGERAYIFTN----ENPALFAKEVEAKAVRRK 118
Query: 114 ARTGSTATEKVELPEGPLEQFTHEMEPFLRKQG---MPVRLNKGVVELVSDFVVCEEGKP 170
AR G A + P GP P L K G +P R+ +G + + D V + G+
Sbjct: 119 ARAGDVAPYDIMAPAGPTNLSPG---PILSKFGKLKIPTRVQEGKIWIAKDSPVVKAGQQ 175
Query: 171 LSPESARILRLLGIKMATFKLHLI-CRWSAEDF 202
++ E A ILR+LG++ KL L+ W F
Sbjct: 176 ITDEIADILRVLGVEPIYEKLRLLGVIWRGRRF 208
>gi|443915654|gb|ELU37028.1| 60S acidic ribosomal protein P0 [Rhizoctonia solani AG-1 IA]
Length = 568
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-RYSQA 78
+ KEV ++ ++ Y SI+V + +N+ + + + R ++ ++ +G+ M R +
Sbjct: 191 RAEKEVYFEKLKQLLDTYPSIFVVNVDNVGSNQMHQIRVALRGKGVVLMGKNTMVRRAIR 250
Query: 79 YKVSK---------FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
+S+ + N G T+ ++V + + AR G+ A + V +P G
Sbjct: 251 TIISERPEFERLLPHVKLNIGFVFTSGDLKDVREIIVANKVAAPARAGALAPKDVFVPAG 310
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD V G + P A +L +L I
Sbjct: 311 -----NTGMEPGKTSFFQALGIPTKIARGTIEIVSDVKVVTGGNRVGPSEATLLNMLNIS 365
Query: 186 MATFKLHLI 194
T+ + ++
Sbjct: 366 PFTYGMTVV 374
>gi|84468360|dbj|BAE71263.1| putative 60S acidic ribosomal protein P0 [Trifolium pratense]
gi|84468386|dbj|BAE71276.1| putative 60S acidic ribosomal protein P0 [Trifolium pratense]
Length = 321
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-----------RYSQAY-KV 81
++ + I V + +N+ + + + R ++ ++ +G+ M + A+ +
Sbjct: 22 LDEFNQILVVNADNVGSNQLQSIRRGLRGDSVVLMGKNTMMKRSVRMHAEKTGNNAFLNL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 VPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG VE+++ + ++G + A +L L I+ ++ L ++ +
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLAIRPFSYGLVVLSVY 196
>gi|145518311|ref|XP_001445033.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412466|emb|CAK77636.1| unnamed protein product [Paramecium tetraurelia]
Length = 278
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 85 LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLE------QFTHEM 138
+ G G T+ P +++ + + + AR G+ A V +P GP QF H +
Sbjct: 101 VAGKVGFVFTDTPVFDLKPIIEENKVETPARVGAIAPIDVVIPPGPTGMDPASIQFFHAL 160
Query: 139 EPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
+ +P ++ KG +++ DFVV + G+ + A +L+ LG K
Sbjct: 161 Q-------IPTKIEKGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKK 200
>gi|21554645|gb|AAM63644.1| putative 60S acidic ribosomal protein P0 [Arabidopsis thaliana]
Length = 320
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 71/170 (41%), Gaps = 13/170 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMR------------YSQAYKV 81
++ Y I V + +N+ + + + R+ + ++ +G+ M + +
Sbjct: 21 IDEYTQILVVAADNVGSTQLQNIRKGLLGDSVVLMGKNTMMKRSVRIHSENTGNTAILNL 80
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V + G F
Sbjct: 81 LPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGN-TGLDPSQTSF 139
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
+ +P ++NKG VE+++ + ++G + A +L LGI+ ++ L
Sbjct: 140 FQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGL 189
>gi|297827621|ref|XP_002881693.1| 60S acidic ribosomal protein P0 [Arabidopsis lyrata subsp. lyrata]
gi|297327532|gb|EFH57952.1| 60S acidic ribosomal protein P0 [Arabidopsis lyrata subsp. lyrata]
Length = 317
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 83/188 (44%), Gaps = 14/188 (7%)
Query: 17 KKGKEHKEVIVNS-IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-- 73
K K K+++ +S + + Y I V + +N+ + + + R+ ++ ++ +G+ M
Sbjct: 4 KGTKAEKKIVYDSKLCQLLNEYPQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMK 63
Query: 74 ---------RYSQAY-KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEK 123
++A+ + L GN GL T +EV KY+ AR G A
Sbjct: 64 RSVRLHADKTGNKAFLNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPID 123
Query: 124 VELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLG 183
V + G F + +P ++NKG VE+++ + ++G + A +L LG
Sbjct: 124 VVVQPGN-TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLG 182
Query: 184 IKMATFKL 191
I+ ++ L
Sbjct: 183 IRPFSYGL 190
>gi|126465991|ref|YP_001041100.1| acidic ribosomal protein P0 [Staphylothermus marinus F1]
gi|254807077|sp|A3DNI2.1|RLA0_STAMF RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|126014814|gb|ABN70192.1| LSU ribosomal protein L10P [Staphylothermus marinus F1]
Length = 338
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%)
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K + L G L T+M E+ L +KY+ + + G A +++ +PEG +
Sbjct: 80 KFEELLTGQNLLLFTHMNAFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNTGLSPGPIL 139
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
K +P R+ + + D VV + G +S E A +L+ L I + K+++
Sbjct: 140 STFSKLKIPTRIQGNSIVITRDTVVAKPGDTISEELASLLQRLDIALKEVKINI 193
>gi|296086050|emb|CBI31491.3| unnamed protein product [Vitis vinifera]
Length = 292
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 7/134 (5%)
Query: 84 FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLR 143
L GN GL T +EV KY+ AR G A V +P G F +
Sbjct: 56 LLVGNVGLIFTRGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPPGN-TGLDPSQTSFFQ 114
Query: 144 KQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW------ 197
+P ++NKG VE+++ + +G + A +L LGI+ ++ L ++ +
Sbjct: 115 VLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVF 174
Query: 198 SAEDFELYREGLDE 211
S E +L E L E
Sbjct: 175 SPEVLDLTEEDLME 188
>gi|389749622|gb|EIM90793.1| hypothetical protein STEHIDRAFT_72429 [Stereum hirsutum FP-91666
SS1]
Length = 312
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 82/189 (43%), Gaps = 19/189 (10%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
+ KE+ ++ + + SI++ + +N+ + + + R ++ ++ +G+ M
Sbjct: 5 RAEKELYFVKLKELIAKFPSIFIVNVDNVGSNQMHQIRVALRGKGVVLMGKNTMVRRALR 64
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
Y ++ + GN G T+ ++ + + AR G+ A V +P G
Sbjct: 65 GIVSEYPSLERLLPHVKGNIGFVFTSSDLADIRDIITANKVAAPARAGAFAPLDVTIPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD V G + A +L +L I
Sbjct: 125 -----NTGMEPGKTSFFQALGIPTKIARGTIEIVSDVKVVTAGSRVGSSEATLLNMLNIS 179
Query: 186 MATFKLHLI 194
T+ + ++
Sbjct: 180 PFTYGMTVV 188
>gi|388498264|gb|AFK37198.1| unknown [Lotus japonicus]
Length = 312
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 21 EHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-----RY 75
E KE +N +++ ++ Y I + +N+ + + R ++ ++ +G+ M R
Sbjct: 5 ERKEEYLNKLKDLLDTYTKILLVRADNVGSNHMQSIRRTLRGKAVVLMGKNTMIRKGIRA 64
Query: 76 SQAYK-----VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGP 130
+ K + FL GN GL TN EV A+ G+ + +V +P+G
Sbjct: 65 NLDAKPELEAIIPFLKGNVGLVFTNGDLAEVRKNVEGLR-VSAAKAGAISPVEVIIPKG- 122
Query: 131 LEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKM 186
+EP FL+ + ++NKG ++++ D ++ G+ + A +L+ L K+
Sbjct: 123 ----DTGLEPTQTAFLQALNIATKINKGQIQILDDKLLLTVGQKVGNSEAALLQKL--KI 176
Query: 187 ATFKLHLICRWSAEDFELYREGLDESDVES 216
F L ED ++ + + ES
Sbjct: 177 NPFSYGLTAFQVYEDGSIFEPSILDKTTES 206
>gi|171686396|ref|XP_001908139.1| hypothetical protein [Podospora anserina S mat+]
gi|170943159|emb|CAP68812.1| unnamed protein product [Podospora anserina S mat+]
Length = 51
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 1 MPKSKRDRPVTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRN 50
MPKSKR + L++ KK +E+K+ + +IR+A+ ++ +VFS +NMRN
Sbjct: 1 MPKSKRAKVYHLTQVSKKTRENKDKLFANIRDAIPEFQYCWVFSVDNMRN 50
>gi|392594720|gb|EIW84044.1| hypothetical protein CONPUDRAFT_80544 [Coniophora puteana
RWD-64-598 SS2]
Length = 312
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 84/189 (44%), Gaps = 19/189 (10%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
+ K++ ++ + Y SI++ + +N+ + + + R ++ ++ +G+ M
Sbjct: 5 RAQKQIYFVKLKELITQYPSIFIVNVDNVGSNQMHQIRVALRGKGVVLMGKNTMVRRALR 64
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
Q ++ + GN G T+ ++V + + AR G+ A + V +P G
Sbjct: 65 SVLAELPQFERLLPHVRGNVGFVFTSKELKDVRDIITANKVAAPARAGAFAPKDVFVPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD V G + A +L +L I
Sbjct: 125 -----NTGMEPGKTSFFQALGIPTKIARGTIEIVSDVQVVVAGTRVGSSEATLLNMLNIS 179
Query: 186 MATFKLHLI 194
T+ + ++
Sbjct: 180 PFTYGMTVV 188
>gi|414588775|tpg|DAA39346.1| TPA: hypothetical protein ZEAMMB73_690671 [Zea mays]
Length = 33
Score = 45.4 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 16/24 (66%), Positives = 23/24 (95%)
Query: 186 MATFKLHLICRWSAEDFELYREGL 209
MATF+L+L+CRWS+++FE Y+EGL
Sbjct: 1 MATFRLYLVCRWSSDEFEAYKEGL 24
>gi|297527345|ref|YP_003669369.1| 50S ribosomal protein L10 [Staphylothermus hellenicus DSM 12710]
gi|297256261|gb|ADI32470.1| ribosomal protein L10 [Staphylothermus hellenicus DSM 12710]
Length = 337
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%)
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K + L G L T+M E+ L +KY+ + + G A +++ +PEG +
Sbjct: 80 KFEEILTGQNLLMFTHMNAFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNTGLSPGPIL 139
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
K +P R+ + + D VV + G +S E A +L+ L I + K+++
Sbjct: 140 STFSKLKIPTRIQGNSIVITRDTVVAKPGDTISEELASLLQRLDIALKEVKINI 193
>gi|242008432|ref|XP_002425010.1| ribosomal P0 protein, putative [Pediculus humanus corporis]
gi|212508639|gb|EEB12272.1| ribosomal P0 protein, putative [Pediculus humanus corporis]
Length = 324
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 74/166 (44%), Gaps = 21/166 (12%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM---------RYSQAY-KVSK 83
++ Y ++ +N+ + + ++ R ++ + ++ +G+ M +QAY K+
Sbjct: 21 LDEYPKCFIVGADNVGSKQMQQIRMSLRGTAVVLMGKNTMMRKAIKGNVEVNQAYEKILP 80
Query: 84 FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE-----GPLEQFTHEM 138
+ GN G T EV + + + A+ G+ A V +P GP E
Sbjct: 81 HIKGNVGFVFTKGDLVEVRNKILENKVRAPAKNGAIAPCAVIIPAQNTGLGP------EK 134
Query: 139 EPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
F + +P +++KG +E+ +D + +EG + A +L +L I
Sbjct: 135 TSFFQALSIPTKISKGTIEITNDVHILKEGDKVGASDATLLNMLNI 180
>gi|145501794|ref|XP_001436877.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404022|emb|CAK69480.1| unnamed protein product [Paramecium tetraurelia]
Length = 323
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Query: 85 LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLE------QFTHEM 138
+ G G T P +++ + + + AR G+ A V +P GP QF H +
Sbjct: 100 VAGKVGFIFTETPVFDLKPIIEENKVETPARVGAIAPIDVVIPPGPTGMDPASIQFFHAL 159
Query: 139 EPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++ KG +++ DFVV + G+ + A +L+ LG K + + ++ +
Sbjct: 160 Q-------IPTKIEKGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKKPFLYGMEVLACY 211
>gi|402467219|gb|EJW02557.1| hypothetical protein EDEG_03035 [Edhazardia aedis USNM 41457]
Length = 269
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 78/187 (41%), Gaps = 13/187 (6%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGR--------- 70
KE KE + + Y + +N+ + +E +++ + + +G+
Sbjct: 7 KERKESTYQAALKLFQTYDKFILVGMDNVTAFQLQEMKKEWRKDTEILLGKNTVIKKALL 66
Query: 71 --YPMRYSQAYK-VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELP 127
Y + +K + L N T + ++ + K FA G + + V L
Sbjct: 67 EIYEKTKKKVFKDLHDMLTSNLAFVFTKNDPKVLKEIMTKNSRDTFAAIGQISQKDVWLK 126
Query: 128 EGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMA 187
+ + E F + + ++ KG VE++SD +V +EG ++P A +L ++G+K
Sbjct: 127 K-HITSMGPEKTKFFQALDIFTKITKGKVEIMSDVLVLKEGTKVTPSQANLLSIMGVKAF 185
Query: 188 TFKLHLI 194
F + ++
Sbjct: 186 VFFMKIV 192
>gi|348686832|gb|EGZ26646.1| hypothetical protein PHYSODRAFT_353332 [Phytophthora sojae]
Length = 317
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM---------RYSQAYKVSKF 84
+ENY I++ +N+ + + ++ R ++ + +G+ + + + + + +F
Sbjct: 19 LENYTRIFLVGVDNVGSAQMQQIRLVLRGRAEVLMGKNTLMRKVFHNFVKKNPGHPLEQF 78
Query: 85 ---LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN G TN E+ + AR GS A V +P GP + F
Sbjct: 79 IPLLKGNVGFVFTNDDLAEIREILESNRVPAPARVGSIAPVDVIVPPGPTGADPGQTS-F 137
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
+ + ++ KG +E+V++ ++ +G+ + A +L+ L IK ++ L
Sbjct: 138 FQALQIATKIQKGQIEIVTEVLLTRKGEKVGNSEAALLQKLDIKPFSYGL 187
>gi|425772982|gb|EKV11360.1| 60S ribosomal protein P0 [Penicillium digitatum PHI26]
gi|425782138|gb|EKV20064.1| 60S ribosomal protein P0 [Penicillium digitatum Pd1]
Length = 312
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 77/178 (43%), Gaps = 19/178 (10%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY-------- 79
+R + Y +I++ +N+ + + E R ++ ++ +G+ M R + +
Sbjct: 15 LRTLLNEYSTIFIVGVDNVSSQQMHEIRMALRGEAVVLMGKNTMVRRALKGFVTENPEWE 74
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
++ + GN G T + + AR G+ A + V +P G ME
Sbjct: 75 RLLPHVRGNVGFIFTKGDLKATKEKILANRVAAPARAGAVAPDDVWVPAG-----NTGME 129
Query: 140 P----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
P F + G+P ++ +G +E+VSD + E G + A +L LL I T+ + +
Sbjct: 130 PGKTAFFQALGVPTKIARGTIEIVSDLKLVEAGNKVGASEATLLNLLNISPFTYGMTI 187
>gi|62902643|gb|AAY19281.1| acidic ribosomal P0 protein [Euplotes raikovi]
Length = 331
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 81 VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP 140
+ K L GN G+ TN +V+ + +K+ A+ G+ A V + GP +
Sbjct: 98 LGKLLKGNLGIIFTNRDLPDVKDIVDKHAREAPAKVGAVAQCDVFIKPGP-TGLDPKQTG 156
Query: 141 FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
F + +P ++ K +E+VS+ + E + + A +L+ LGI ++KL ++
Sbjct: 157 FFQNLQIPTKIVKTQIEIVSEKQIIWESEKVGSNEAALLQKLGINPFSYKLKVV 210
>gi|387592202|gb|EIJ87226.1| hypothetical protein NEQG_02561 [Nematocida parisii ERTm3]
gi|387597455|gb|EIJ95075.1| hypothetical protein NEPG_00600 [Nematocida parisii ERTm1]
Length = 275
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 74/177 (41%), Gaps = 11/177 (6%)
Query: 36 NYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKVSK----------FL 85
YK + N+ + + + R+ ++ +G+ + K+S+ +
Sbjct: 30 TYKKFMIVDMTNISSNQCQTIRQGLRGKGEFLMGKNTTIKTALKKISENVPELKDVENVI 89
Query: 86 CGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQ 145
N G+ TN ++E +F + + A+ G + V + E T E F +
Sbjct: 90 KNNVGIVFTNGSLSDIEDIFEANKVHAVAKPGDLSQCDVWI-EPIATSLTPEKTGFFQAL 148
Query: 146 GMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDF 202
G+ ++ KG +E++S EGK + A +L LLG+ +K+ ++ +S F
Sbjct: 149 GIATKITKGKIEILSKCQALYEGKRVGHSEAALLSLLGVTPFIYKMKVLYAYSDGKF 205
>gi|159905081|ref|YP_001548743.1| acidic ribosomal protein P0 [Methanococcus maripaludis C6]
gi|238686939|sp|A9A838.1|RLA0_METM6 RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|159886574|gb|ABX01511.1| ribosomal protein L10 [Methanococcus maripaludis C6]
Length = 335
Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 90/200 (45%), Gaps = 28/200 (14%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMR------------ 74
VN+++ +++ I + + ++ +E R++I+ L + R +
Sbjct: 18 VNALKELLKSTSIIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLMKRAIEEVAEETG 77
Query: 75 YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVE-------LP 127
+ K++ +L + T M ++ ++ + + G+TA +E +P
Sbjct: 78 NPEFAKLADYLDKGAAIIATEMNPFKLFKTLDESKSPAPVKGGATAPCDIEVKAGSTGMP 137
Query: 128 EGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMA 187
GP F E L+ G+P ++KG + + D VV +EG+ +S + A +L LGIK
Sbjct: 138 PGP---FLSE----LKAVGIPAAIDKGKIGIKEDKVVIKEGEVVSQKLAVVLSALGIKPV 190
Query: 188 TFKLHLICRWSAEDFELYRE 207
T L+++ + ED +Y E
Sbjct: 191 TVGLNVLGVY--EDGVIYTE 208
>gi|145506509|ref|XP_001439215.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406399|emb|CAK71818.1| unnamed protein product [Paramecium tetraurelia]
Length = 306
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 85 LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLE------QFTHEM 138
+ G G T+ P +++ + + + AR G+ A V +P GP QF H +
Sbjct: 83 VAGKVGFVFTDTPVFDLKPVIEENKVETPARVGAVAPIDVVIPPGPTGMDPASIQFFHAL 142
Query: 139 EPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
+ +P ++ KG +++ DFVV + G+ + A +L+ LG K
Sbjct: 143 Q-------IPTKIEKGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKK 182
>gi|145485981|ref|XP_001428998.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124396087|emb|CAK61600.1| unnamed protein product [Paramecium tetraurelia]
Length = 323
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 85 LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLE------QFTHEM 138
+ G G T+ +++S+ + + AR G+ A V +P GP QF H +
Sbjct: 100 VAGKVGFIFTDTAVFDLKSVIEENKVETPARVGAVAPIDVVIPPGPTGMDPASIQFFHAL 159
Query: 139 EPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
+ +P ++ KG +++ DFVV + G+ + A +L+ LG K
Sbjct: 160 Q-------IPTKIEKGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKK 199
>gi|150400014|ref|YP_001323781.1| acidic ribosomal protein P0 [Methanococcus vannielii SB]
gi|133042|sp|P15826.2|RLA0_METVS RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E; AltName: Full=ML2
gi|44743|emb|CAA33410.1| ribosomal protein L10 [Methanococcus vannielii]
gi|150012717|gb|ABR55169.1| ribosomal protein L10 [Methanococcus vannielii SB]
Length = 336
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 20/95 (21%)
Query: 115 RTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPE 174
++GST +P GP F E L+ G+P ++KG + + D VV +EG +SP+
Sbjct: 130 KSGSTG-----MPPGP---FLSE----LKAVGIPAAIDKGKIGIKEDKVVAKEGDVISPK 177
Query: 175 SARILRLLGIKMATFKLHLICRWSAEDFELYREGL 209
A +L LGIK T L+++ +Y EG+
Sbjct: 178 LAVVLSALGIKPVTVGLNVLG--------VYEEGV 204
>gi|343427805|emb|CBQ71331.1| probable RPP0-acidic ribosomal protein L10.e [Sporisorium reilianum
SRZ2]
Length = 312
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-RYSQAYKVSK--------- 83
+E Y SI++ + +N+ + + + R+ ++ ++ +G+ M R + V
Sbjct: 20 LEKYPSIFIVNIDNVSSQQMHQIRQSLRGKGVVLMGKNTMARRALRLLVGDNPDYERLMP 79
Query: 84 FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP--- 140
L GN G T+ ++V L AR G+ A + + G MEP
Sbjct: 80 HLKGNIGFVFTSGDLKDVRDLILSNRVAAPARAGAYAPADIFVKAG-----NTGMEPGKT 134
Query: 141 -FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
F + G+P ++ +G +E+VSD V + G + A +L +L I T+ + ++
Sbjct: 135 SFFQALGVPTKIARGTIEIVSDVKVVDAGNRVGTSEATLLNMLNISPFTYGMTVV 189
>gi|22257021|sp|Q8TX50.2|RLA0_METKA RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
Length = 357
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 83/180 (46%), Gaps = 11/180 (6%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKP-SRLLWVGRYP-MRYSQAYKVSK- 83
V ++ ++ Y+++ + E + + +E R +++ ++ + R MR + K+ +
Sbjct: 25 VKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNTLMRIALEEKLDER 84
Query: 84 --------FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFT 135
++ G TN+ ++ L + + A+ G A E + +PEGP
Sbjct: 85 PELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDIVVPEGPTPFEP 144
Query: 136 HEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLIC 195
+ L++ G+P ++ G V + D V+ +EG+ + ++A IL+ L I+ + ++
Sbjct: 145 GPIVSELQQAGLPAQIQDGKVVITKDTVLVKEGEEIDEKTAEILKKLEIEPMEVGVDIVA 204
>gi|62902641|gb|AAY19280.1| acidic ribosomal P0 protein [Moneuplotes minuta]
Length = 333
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 83 KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFL 142
+ L GN G+ TN +++ + +++ AR GS A V + G + F
Sbjct: 98 RLLKGNLGIIFTNHDLTDIKDIIDRHTREAPARVGSVAQCDVWIKAGGT-GLDPKQTAFF 156
Query: 143 RKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
+ +P ++ K +E+ +D + EG+ + A +L+ L I ++KL +
Sbjct: 157 QNLAIPTKIAKAQIEISADKQIITEGEKVGSNEAALLQKLNINPFSYKLSV 207
>gi|330834454|ref|YP_004409182.1| acidic ribosomal protein P0 [Metallosphaera cuprina Ar-4]
gi|329566593|gb|AEB94698.1| acidic ribosomal protein P0 [Metallosphaera cuprina Ar-4]
Length = 330
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 73/178 (41%), Gaps = 7/178 (3%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQA-------Y 79
V+ I + N K++ + + E K E R++++ + V + + A
Sbjct: 17 VSEIEEKLRNSKTLIIVNIEGFPADKLHEIRKKLRGKAEIKVTKNTLFLIAAKRAGLDTQ 76
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ ++ G+ +N + +K++ + G A E+V +P G +
Sbjct: 77 KLESYITGSNAFIFSNENPFAISIFLSKFKLKRYPMPGDKADEEVVIPAGDTGMTAGPIL 136
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
K + ++ G V ++ D V+ + G P+ E+ I++ LGI KL L +
Sbjct: 137 STFGKLKVQTKVQDGKVHVIKDTVIAKPGDPIPAEAVPIIQKLGIMPVYVKLKLKAAY 194
>gi|15790195|ref|NP_280019.1| acidic ribosomal protein P0 [Halobacterium sp. NRC-1]
gi|169235924|ref|YP_001689124.1| acidic ribosomal protein P0 [Halobacterium salinarum R1]
gi|133039|sp|P13553.1|RLA0_HALSA RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|229564302|sp|B0R4W1.1|RLA0_HALS3 RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|43534|emb|CAA31431.1| unnamed protein product [Halobacterium salinarum]
gi|10580651|gb|AAG19499.1| 50S ribosomal protein L10P [Halobacterium sp. NRC-1]
gi|167726990|emb|CAP13776.1| 50S ribosomal protein L10 [Halobacterium salinarum R1]
Length = 352
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 86/196 (43%), Gaps = 25/196 (12%)
Query: 14 KTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM 73
+T ++ E K V + + +E Y S+ V + + + + ++ R + L + R +
Sbjct: 7 RTTEEVPEWKRQEVAELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTL 66
Query: 74 -------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTA 120
+++++ G GL TN ++ F Y+ + ++T G A
Sbjct: 67 LVRALEEAGDGLDTLTEYVEGEVGLVATN------DNPFGLYQQLENSKTPAPINAGEVA 120
Query: 121 TEKVELPEGPLEQFTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESAR 177
+ +PEG + PF L+ G R+ +G ++++ D VV EEG+ +S + +
Sbjct: 121 PNDIVVPEG---DTGIDPGPFVGELQTIGANARIQEGSIQVLDDSVVTEEGETVSDDVSN 177
Query: 178 ILRLLGIKMATFKLHL 193
+L LGI+ L L
Sbjct: 178 VLSELGIEPKEVGLDL 193
>gi|20094262|ref|NP_614109.1| acidic ribosomal protein P0 [Methanopyrus kandleri AV19]
gi|19887299|gb|AAM02039.1| Ribosomal protein L10 [Methanopyrus kandleri AV19]
Length = 362
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 83/180 (46%), Gaps = 11/180 (6%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKP-SRLLWVGRYP-MRYSQAYKVSK- 83
V ++ ++ Y+++ + E + + +E R +++ ++ + R MR + K+ +
Sbjct: 30 VKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNTLMRIALEEKLDER 89
Query: 84 --------FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFT 135
++ G TN+ ++ L + + A+ G A E + +PEGP
Sbjct: 90 PELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDIVVPEGPTPFEP 149
Query: 136 HEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLIC 195
+ L++ G+P ++ G V + D V+ +EG+ + ++A IL+ L I+ + ++
Sbjct: 150 GPIVSELQQAGLPAQIQDGKVVITKDTVLVKEGEEIDEKTAEILKKLEIEPMEVGVDIVA 209
>gi|448305331|ref|ZP_21495263.1| acidic ribosomal protein P0 [Natronorubrum sulfidifaciens JCM
14089]
gi|445589178|gb|ELY43414.1| acidic ribosomal protein P0 [Natronorubrum sulfidifaciens JCM
14089]
Length = 346
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 92/211 (43%), Gaps = 30/211 (14%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKVS---- 82
V+ + + ++NY+S+ + + + + ++ R + + L V R ++ +
Sbjct: 20 VDELISLIDNYESVGIVGIAGIPSKQLQDMRRDLHGTAELRVSRNTLQVRSLEETGLDDL 79
Query: 83 -KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPEGPLEQFT 135
+ G GL T+ ++ F Y++ + ++T G A + +PEG
Sbjct: 80 VTHIEGQVGLIATD------DNPFALYKELEASKTPAPINEGEVAPNDIVIPEG---DTG 130
Query: 136 HEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLH 192
+ PF L+ G R+ +G ++++ D V E G+ +S + + +L LGI+ L
Sbjct: 131 VDPGPFVGELQSIGANARIEEGSIQVMEDSTVLEAGEEVSADLSNVLSELGIEPKEVGLD 190
Query: 193 LIC------RWSAEDFELYREGLDESDVESA 217
L + ED ++ E ESDV +A
Sbjct: 191 LKAVVAEGVLFDPEDLDIDIEAY-ESDVATA 220
>gi|147815051|emb|CAN65663.1| hypothetical protein VITISV_014917 [Vitis vinifera]
Length = 379
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 81/194 (41%), Gaps = 18/194 (9%)
Query: 10 VTLSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVG 69
V LS+ KKK + +++ ++ Y I + + +NM + + ++ ++ ++ +G
Sbjct: 3 VKLSRAKKKVQYDQKLC-----RLLDEYSQILIVAVDNMGSKQLQDIHRALRGHSVVLMG 57
Query: 70 -----------RYPMRYSQAY-KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTG 117
M ++A+ + L GN GL T + V KY+ AR G
Sbjct: 58 NNTMMKRSVRLHVEMTGNKAFLSLIPLLVGNIGLIFTKEDLKGVSDEVAKYKXGAPARXG 117
Query: 118 STATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESAR 177
A V + G F + +P ++NKG VE+V + ++G + A
Sbjct: 118 VVAPIDVVIQPGS-TGLDPAXTSFFQVLNIPTKINKGAVEIVVPVQLVKKGDKVGSSEAA 176
Query: 178 ILRLLGIKMATFKL 191
+L LG K ++ L
Sbjct: 177 LLAKLGKKXFSYGL 190
>gi|266946|sp|P29764.1|RLA0_CHERU RecName: Full=60S acidic ribosomal protein P0; AltName:
Full=Light-induced 34 kDa protein
gi|18141|emb|CAA33276.1| 34kD light-induced protein [Chenopodium rubrum]
Length = 321
Score = 43.9 bits (102), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 76/172 (44%), Gaps = 13/172 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY----------KV 81
++ Y + + S +N+ + + + R ++ ++ +G+ M R + + V
Sbjct: 22 LDEYSQVLIASADNVGSNQLQAIRIGLRGDSIVLMGKNTMMKRSIRLHAENTGNENLRNV 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
+ N GL T +V +KY+ AR G A V +P G F
Sbjct: 82 EQLFLPNVGLIFTKGDLNQVREEISKYKVGAPARFGLVAPIDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
+ +P ++NKG VE+++ + ++G+ + A +L LGI+ ++ L++
Sbjct: 141 FQVLNIPTKINKGTVEIITAVELIKKGEKVGSSEAALLAKLGIRPFSYGLNV 192
>gi|301095349|ref|XP_002896775.1| 60S acidic ribosomal protein P0 [Phytophthora infestans T30-4]
gi|262108658|gb|EEY66710.1| 60S acidic ribosomal protein P0 [Phytophthora infestans T30-4]
Length = 318
Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 79/176 (44%), Gaps = 13/176 (7%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM---------RYSQA 78
+ + + +ENY I++ +N+ + + ++ R ++ + +G+ + + +
Sbjct: 13 DKLESLLENYTKIFLVGVDNVGSAQMQQIRLVLRGRAEVLMGKNTLMRKVFNNFVKKNPG 72
Query: 79 YKVSKF---LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFT 135
+ + F L GN G TN E+ + AR GS A V +P GP
Sbjct: 73 HPLELFIPLLKGNVGFVFTNDDLSEIREVLESNRVPAPARVGSIAPVDVIVPPGPTGADP 132
Query: 136 HEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
+ F + + ++ KG +E+V++ ++ +G+ + A +L+ L IK ++ L
Sbjct: 133 GQTS-FFQALQIATKIQKGQIEIVTEVMLTRKGEKVGNSEAALLQKLDIKPFSYGL 187
>gi|332373132|gb|AEE61707.1| unknown [Dendroctonus ponderosae]
Length = 315
Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 72/170 (42%), Gaps = 11/170 (6%)
Query: 32 NAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQAYKV 81
N +E Y ++ +N+ + + ++ R ++ S ++ +G+ M + K+
Sbjct: 19 NLLEEYPKCFIVGADNVGSKQMQQIRISLRGSAVVLMGKNTMMRKAIKGHVESNASLEKL 78
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
+ GN G T+ EV + + AR G+ A V +P E F
Sbjct: 79 LPHIKGNVGFVFTSGDLVEVRDRLLENKVRAPARAGAIAPLSVVIPAQN-TGLPPEKTSF 137
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
+ +P +++KG +E+V+D + G + A +L +L I ++ L
Sbjct: 138 FQALSIPTKISKGTIEIVNDVNILRPGDKVGASEATLLNMLNISPFSYGL 187
>gi|150400626|ref|YP_001324392.1| acidic ribosomal protein P0 [Methanococcus aeolicus Nankai-3]
gi|166223881|sp|A6UTF8.1|RLA0_META3 RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|150013329|gb|ABR55780.1| ribosomal protein L10 [Methanococcus aeolicus Nankai-3]
Length = 338
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 14/90 (15%)
Query: 116 TGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPES 175
GST +P GP F E L+ G+P ++KG + + D V+ +EG+ +SP+
Sbjct: 130 AGSTG-----MPPGP---FLGE----LKGAGLPAVIDKGKIAIKDDTVIVKEGEVVSPKV 177
Query: 176 ARILRLLGIKMATFKLHLICRWSAEDFELY 205
A +L LGIK L L+ + ED +Y
Sbjct: 178 AVVLSALGIKPTKVGLDLLAAY--EDGIVY 205
>gi|209877763|ref|XP_002140323.1| 60S acidic ribosomal protein P0 [Cryptosporidium muris RN66]
gi|209555929|gb|EEA05974.1| 60S acidic ribosomal protein P0, putative [Cryptosporidium muris
RN66]
Length = 308
Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 11/168 (6%)
Query: 36 NYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQAYKVSKFL 85
+Y I V + +++ + + + R ++ + +G+ M + + K+ +
Sbjct: 23 SYPRILVANADHVGSKQMADIRLALRGKAAILMGKNTMIRTALKQMLTSHPEIEKLIDLI 82
Query: 86 CGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQ 145
N GL EV + ++Y+ AR G A V +P G F +
Sbjct: 83 RLNIGLIFCIDEPSEVRKVISEYQVPAPARQGVIAPCDVTVPAGA-TGLDPSQTSFFQAL 141
Query: 146 GMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
G+ ++ KG VE+ SD + EEGK ++ A +L+ L IK ++ L +
Sbjct: 142 GIATKIVKGQVEIQSDVHLIEEGKKVTASQAVLLQKLNIKPFSYGLKI 189
>gi|52630935|gb|AAU84931.1| putative acidic p0 ribosomal protein [Toxoptera citricida]
Length = 314
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 76/177 (42%), Gaps = 21/177 (11%)
Query: 32 NAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQAYKV 81
N ++ + ++ +N+ + + ++ R ++ + ++ +G+ M R K+
Sbjct: 19 NLLDEFPKCFIVGADNVGSKQMQQIRISLRGNAVVLMGKNTMMRKAIKGHIDRNQSLEKI 78
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE-----GPLEQFTH 136
+ GN G T E+ + + AR G+ A V +P GP
Sbjct: 79 MPHIRGNVGFVFTRSDLVEIRDKLLENKVRAPARPGAIAPCPVVIPAQNTGLGP------ 132
Query: 137 EMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
E F + +P +++KG +E+++D + +EG + A +L +L I ++ L +
Sbjct: 133 EKTSFFQALSIPTKISKGTIEIINDVHILKEGDKVGASEATLLNMLNISPFSYGLAV 189
>gi|346430395|emb|CCC55651.1| 50S ribosomal protein L10p [uncultured archaeon]
Length = 292
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 83 KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFL 142
++L G L TNM E+ L + AR G AT + +P G +
Sbjct: 84 RYLSGQAMLIFTNMNPFELNMLLEQSMVEMPARAGDVATSDIVVPSGNTGMQPGPILSSF 143
Query: 143 RKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
++ +P R+ G + + D VV G+ +S + A +L LG+K
Sbjct: 144 KQFKIPTRIESGSIFVTQDTVVARAGETISADLASLLSKLGLK 186
>gi|242398375|ref|YP_002993799.1| Acidic ribosomal like protein P0 [Thermococcus sibiricus MM 739]
gi|259491696|sp|C6A1F5.1|RLA0_THESM RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|242264768|gb|ACS89450.1| Acidic ribosomal like protein P0 [Thermococcus sibiricus MM 739]
Length = 338
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 79/183 (43%), Gaps = 12/183 (6%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------------R 74
V + +++Y I + ++ + RE ++ +L V R +
Sbjct: 12 VEELTKLLQDYPVIALVDVADVPAYPLSKMRESLRDKAVLRVSRNTLIELALKKAAQELN 71
Query: 75 YSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQF 134
S K+ + + G TG+ +T + ++ + + A+ G+ A V +P GP
Sbjct: 72 DSNLEKLIEHIQGGTGILVTKINPFKLYKFLEESKKPAPAKAGAPAPRDVVVPAGPTPLS 131
Query: 135 THEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
+ ++ G+P R+ KG V + D VV + G+ ++P+ A IL LGI+ L L+
Sbjct: 132 PGPLVGEMQALGIPARIEKGKVSIQKDTVVLKAGEIITPQLANILNQLGIEPLEVGLKLL 191
Query: 195 CRW 197
+
Sbjct: 192 AAY 194
>gi|313125988|ref|YP_004036258.1| 50S ribosomal protein L10 [Halogeometricum borinquense DSM 11551]
gi|448285828|ref|ZP_21477067.1| acidic ribosomal protein P0 [Halogeometricum borinquense DSM 11551]
gi|312292353|gb|ADQ66813.1| LSU ribosomal protein L10P [Halogeometricum borinquense DSM 11551]
gi|445575858|gb|ELY30321.1| acidic ribosomal protein P0 [Halogeometricum borinquense DSM 11551]
Length = 347
Score = 43.5 bits (101), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 95/223 (42%), Gaps = 40/223 (17%)
Query: 21 EHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYK 80
E K + V + + +E Y+S+ V S + + + + R + S L + R + +
Sbjct: 15 EWKRIEVGELTDFLEEYQSVGVVSVTGIPSRQLQSMRRDLHGSAELRMSRNTLVTRALEQ 74
Query: 81 V-------SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELP 127
V + ++ G L TN ++ F Y+ + ++T G A + +P
Sbjct: 75 VNDGLEELTDYVYGQVALVGTN------DNPFGLYKQLEASKTPAPINAGEVAPNDIVIP 128
Query: 128 EGPLEQFTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
EG + PF L++ G R+ +G +++ D V +EG+ +S E + +L LGI
Sbjct: 129 EG---DTGVDPGPFVGELQQVGASARIMEGSIKVTEDSHVLDEGEVVSEELSNVLNELGI 185
Query: 185 KMATFKLHLICRWS----------AEDFELYREGLDESDVESA 217
+ L L +S A D E YR +D++SA
Sbjct: 186 EPKEVGLDLRGVYSEGVLFEPDELAIDVEEYR-----ADIQSA 223
>gi|239799209|dbj|BAH70537.1| ACYPI000079 [Acyrthosiphon pisum]
Length = 314
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 72/168 (42%), Gaps = 21/168 (12%)
Query: 32 NAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQAYKV 81
N ++ + ++ +N+ + + ++ R ++ + ++ +G+ M R K+
Sbjct: 19 NLLDEFPKCFIVGADNVGSKQMQQIRISLRGNAVVLMGKNTMMRKAIKGHIDRNQSLEKI 78
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE-----GPLEQFTH 136
+ GN G T E+ + + AR G+ A V +P GP
Sbjct: 79 MPHIRGNVGFVFTRSDLVEIRDKLLENKVRAPARPGAIALCPVVIPAQNTGLGP------ 132
Query: 137 EMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
E F + +P +++KG +E+++D + +EG + A +L +L I
Sbjct: 133 EKTSFFQALSIPTKISKGTIEIINDVHILKEGDKVGASEATLLNMLNI 180
>gi|448729684|ref|ZP_21711998.1| acidic ribosomal protein P0 [Halococcus saccharolyticus DSM 5350]
gi|445794646|gb|EMA45190.1| acidic ribosomal protein P0 [Halococcus saccharolyticus DSM 5350]
Length = 354
Score = 43.5 bits (101), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 84/209 (40%), Gaps = 40/209 (19%)
Query: 12 LSKTKKKGKEHKEVI-------VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSR 64
+S + G E I V + + +E Y+S+ V S + + + + R ++
Sbjct: 1 MSAESEAGDRQTEAIPEWKREEVADLADLIETYESVGVVSIGGIPSRQLQAMRRELHGEA 60
Query: 65 LLWVGRYPM--RYSQAY-----KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART- 116
L V R + R +A ++ + G GL T+ E+ F Y + ++T
Sbjct: 61 ELRVSRNTLLVRALEAAGEGVADLTSEIEGQVGLIGTD------ENPFGLYRQLEASKTP 114
Query: 117 -----GSTATEKVELPE-------GPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVV 164
G A + +PE GP F E L++ G R+ G + + D V
Sbjct: 115 APINAGEIAPNAITIPESDTGVDPGP---FVGE----LQQVGAAARIMDGSIHVTEDSTV 167
Query: 165 CEEGKPLSPESARILRLLGIKMATFKLHL 193
EEG+ +S + A +L LGI+ L L
Sbjct: 168 LEEGEEVSAQLANVLGELGIEPKEVGLDL 196
>gi|390594347|gb|EIN03759.1| hypothetical protein PUNSTDRAFT_56016 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 313
Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 86/194 (44%), Gaps = 19/194 (9%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
K KE ++ + ++ SI++ + +N+ + + + R ++ ++ +G+ M
Sbjct: 5 KTQKEAYFVKLKELISSHPSIFLVNVDNVGSNQMHQIRVALRGKGVVLMGKNTMVRRALR 64
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
+ Q ++ + GN G T+ +E+ + + AR G+ A + V + G
Sbjct: 65 SILAEFPQFERLLPHVKGNIGFVFTSGELKEIRDIITANKVAAPARAGALAPKDVFVAAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+V+D V G + A +L +L I
Sbjct: 125 -----NTGMEPGKTSFFQALGIPTKIARGTIEIVNDIKVVTAGTRVGTSEATLLNMLNIS 179
Query: 186 MATFKLHLICRWSA 199
T+ + ++ + A
Sbjct: 180 PFTYGMTVVQIFDA 193
>gi|396081713|gb|AFN83328.1| 60S acidic ribosomal protein P0 [Encephalitozoon romaleae SJ-2008]
Length = 277
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 35/187 (18%), Positives = 79/187 (42%), Gaps = 9/187 (4%)
Query: 15 TKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGR---- 70
TK GKE KE+ + Y + EN+ + + K+ + Q + +G+
Sbjct: 13 TKMDGKERKELTYEKAKKLFGTYSRFALVGIENVESTQLKDIKRQWGNNVEFLMGKNSAI 72
Query: 71 ----YPMRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVEL 126
+ + +V + G+ +++ ++ A+ G+ A + V +
Sbjct: 73 KRAIADLGKPELSRVLDLIKGDVCFVFFKGDARDIKKTIDENVREACAKVGNIAQKDVWV 132
Query: 127 PEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKM 186
+ + T + + + G+ ++ KG VE++S + V +G + P A +L +L IK
Sbjct: 133 -DSCITGMTPDKTSYFQVLGIATKITKGKVEIISPYKVLSKGDKVGPSQANLLGMLNIKP 191
Query: 187 ATFKLHL 193
++K+ +
Sbjct: 192 FSYKMTM 198
>gi|187117172|ref|NP_001119687.1| ribosomal protein LP0 [Acyrthosiphon pisum]
gi|89473746|gb|ABD72685.1| putative acidic p0 ribosomal protein [Acyrthosiphon pisum]
gi|239799195|dbj|BAH70530.1| ACYPI000079 [Acyrthosiphon pisum]
gi|239799197|dbj|BAH70531.1| ACYPI000079 [Acyrthosiphon pisum]
gi|239799199|dbj|BAH70532.1| ACYPI000079 [Acyrthosiphon pisum]
gi|239799201|dbj|BAH70533.1| ACYPI000079 [Acyrthosiphon pisum]
gi|239799203|dbj|BAH70534.1| ACYPI000079 [Acyrthosiphon pisum]
gi|239799205|dbj|BAH70535.1| ACYPI000079 [Acyrthosiphon pisum]
gi|239799207|dbj|BAH70536.1| ACYPI000079 [Acyrthosiphon pisum]
gi|239799211|dbj|BAH70538.1| ACYPI000079 [Acyrthosiphon pisum]
gi|239799213|dbj|BAH70539.1| ACYPI000079 [Acyrthosiphon pisum]
gi|239799215|dbj|BAH70540.1| ACYPI000079 [Acyrthosiphon pisum]
gi|239799217|dbj|BAH70541.1| ACYPI000079 [Acyrthosiphon pisum]
Length = 314
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 72/168 (42%), Gaps = 21/168 (12%)
Query: 32 NAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQAYKV 81
N ++ + ++ +N+ + + ++ R ++ + ++ +G+ M R K+
Sbjct: 19 NLLDEFPKCFIVGADNVGSKQMQQIRISLRGNAVVLMGKNTMMRKAIKGHIDRNQSLEKI 78
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE-----GPLEQFTH 136
+ GN G T E+ + + AR G+ A V +P GP
Sbjct: 79 MPHIRGNVGFVFTRSDLVEIRDKLLENKVRAPARPGAIAPCPVVIPAQNTGLGP------ 132
Query: 137 EMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
E F + +P +++KG +E+++D + +EG + A +L +L I
Sbjct: 133 EKTSFFQALSIPTKISKGTIEIINDVHILKEGDKVGASEATLLNMLNI 180
>gi|299472728|emb|CBN80296.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 285
Score = 43.1 bits (100), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Query: 85 LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRK 144
+ GN G TN ++ + + AR GS A V +P GP + F +
Sbjct: 45 VVGNVGFIFTNGELGDIRDVIEAHRVPAPARVGSIAPIDVMVPPGPTGCDPGQTS-FFQV 103
Query: 145 QGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+P ++ KG +E+ + + +G+ + A +L+ L I+ T+ L + C +
Sbjct: 104 LQVPTKITKGQIEITTQVFLVPKGQKVGSSEAALLQKLSIRPFTYGLVIDCVY 156
>gi|43454|emb|CAA33180.1| unnamed protein product [Halobacterium salinarum]
Length = 352
Score = 43.1 bits (100), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 86/196 (43%), Gaps = 25/196 (12%)
Query: 14 KTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM 73
+T ++ E K V + + +E Y S+ V + + + + ++ R + + + R +
Sbjct: 7 RTTEEVPEWKRQEVAELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAAVRMSRNTL 66
Query: 74 -------RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTA 120
+++++ G GL TN ++ F Y+ + ++T G A
Sbjct: 67 LVRALEEAGDGLDTLTEYVEGEVGLVATN------DNPFGLYQQLENSKTPAPINAGEVA 120
Query: 121 TEKVELPEGPLEQFTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESAR 177
+ +PEG + PF L+ G R+ +G ++++ D VV EEG+ +S + +
Sbjct: 121 PNDIVVPEG---DTGIDPGPFVGELQTIGANARIQEGSIQVLDDSVVTEEGETVSDDVSN 177
Query: 178 ILRLLGIKMATFKLHL 193
+L LGI+ L L
Sbjct: 178 VLSELGIEPKEVGLDL 193
>gi|347523540|ref|YP_004781110.1| 50S ribosomal protein L10 [Pyrolobus fumarii 1A]
gi|343460422|gb|AEM38858.1| ribosomal protein L10 [Pyrolobus fumarii 1A]
Length = 348
Score = 43.1 bits (100), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Query: 78 AYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHE 137
A K +L GN N+ E+ + +K A+ G A ++ +P G
Sbjct: 84 ASKFEPYLTGNNIFIFANINPFELAMILDKERARAPAKPGMKAPTEIVVPAGNTGLQPGP 143
Query: 138 MEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ K +P+R+ +G + + D VV + G +S E A +L+ LGI+ +++L +
Sbjct: 144 IMSVFSKLRIPIRVQEGTIWIAKDTVVAKPGDVISEELASLLQKLGIE--PVEIYLKLKM 201
Query: 198 SAED 201
+ ED
Sbjct: 202 AYED 205
>gi|315319175|gb|ADU04571.1| 60S acidic ribosomal protein PO [Phaseolus vulgaris]
Length = 320
Score = 42.7 bits (99), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 13/148 (8%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKVSK---------- 83
+E Y I V + +N+ + + + R+ ++ ++ +G+ M S+
Sbjct: 22 LEEYGQILVVNADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRMHSEKTGNNVYLNL 81
Query: 84 --FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 IPLLIGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGK 169
+ +P ++NKG VE+++ + +G+
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIRKGE 168
>gi|71023945|ref|XP_762202.1| hypothetical protein UM06055.1 [Ustilago maydis 521]
gi|46101706|gb|EAK86939.1| hypothetical protein UM06055.1 [Ustilago maydis 521]
Length = 313
Score = 42.7 bits (99), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-RYSQAYKVSK--------- 83
+E Y SI++ + +N+ + + + R+ ++ ++ +G+ M R + +
Sbjct: 20 LEKYPSIFIVNIDNVSSQQMHQIRQSLRGKGVVLMGKNTMARRALRMLIGDNPDYERLLP 79
Query: 84 FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP--- 140
L GN G T+ ++V + AR G+ A + + G MEP
Sbjct: 80 HLKGNIGFVFTSGDLKDVRDVILSNRVAAPARAGAYAPADIFVKAG-----NTGMEPGKT 134
Query: 141 -FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
F + G+P ++ +G +E+VSD V + G + A +L +L I T+ + ++
Sbjct: 135 SFFQALGVPTKIARGTIEIVSDVKVVDAGNRVGTSEATLLNMLNISPFTYGMTVV 189
>gi|328874599|gb|EGG22964.1| ribosomal acidic phosphoprotein P0 [Dictyostelium fasciculatum]
Length = 702
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 85 LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP---- 140
L NT + E++ + K A+ G A + V +P+GP +EP
Sbjct: 476 LKSNTAVIFAKDSLSEIKEIIKKIRVGAPAKAGVIAPQDVHVPKGPTG-----LEPTQVN 530
Query: 141 FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
FL++ + ++N+G +++ SD + + G+ + A +L+ L IK T+ L + + +
Sbjct: 531 FLQELKIATKINRGQIDIESDIHLIKTGQKVGASEATLLQKLNIKPFTYGLEPLIVY--D 588
Query: 201 DFELYREGLDESDV 214
+ Y + E D+
Sbjct: 589 EGACYSPSISEEDL 602
>gi|15679675|ref|NP_276792.1| acidic ribosomal protein P0 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|3914774|sp|O27717.1|RLA0_METTH RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|2622811|gb|AAB86153.1| ribosomal protein Lp0 (E.coli ) [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 336
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/169 (17%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYS 76
V + + ++ Y+ + + + ++ + ++ R+ ++ S L+ + + +
Sbjct: 12 VQELHDLIKGYEVVGIANLADIPARQLQKMRQTLRDSALIRMSKKTLISLALEKAGRELE 71
Query: 77 QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTH 136
+S ++ G L T+M ++ + + A+ G+ A + + +P+G
Sbjct: 72 NVDSLSDYMEGQPALIFTDMNPFKLFKILEDSKTPAPAKPGAIAPDDIVVPKGDTGFAPG 131
Query: 137 EMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
+ L++ G+P ++ KG + + +D VV + G+ + P+ A IL L I+
Sbjct: 132 PILGELQQIGIPAKIEKGKIVVSNDHVVVKAGEEIPPKVAGILTRLDIQ 180
>gi|388857327|emb|CCF49001.1| probable RPP0-acidic ribosomal protein L10.e [Ustilago hordei]
Length = 313
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 78/187 (41%), Gaps = 43/187 (22%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-RYSQAYKVSK--------- 83
+E Y SI++ + +N+ + + + R+ ++ ++ +G+ M R + V
Sbjct: 20 LEKYPSIFIVNIDNVSSQQMHQIRQSLRGKGVVLMGKNTMARRALRMLVGDNPDYERLLP 79
Query: 84 FLCGNTGLFLTNMPKEEV--ESLFNKYEDYD----------FARTGSTATEKVELPEGPL 131
L GN G T+ ++V + L N+ F + G+T
Sbjct: 80 HLKGNIGFVFTSGDLKDVRDQILSNRVAAPARAGAYAPADIFVKAGNTG----------- 128
Query: 132 EQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMA 187
MEP F + G+P ++ +G +E+VSD V + G + A +L +L I
Sbjct: 129 ------MEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGSRVGTSEATLLNMLNISPF 182
Query: 188 TFKLHLI 194
T+ + ++
Sbjct: 183 TYGMTVV 189
>gi|449018873|dbj|BAM82275.1| 60S acidic ribosomal protein P0 [Cyanidioschyzon merolae strain
10D]
Length = 323
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 73/170 (42%), Gaps = 12/170 (7%)
Query: 35 ENYKSIYVFSFENMRNLKFKEFREQIKP-SRLLWVGRYPM----------RYSQAYKVSK 83
+ Y I V +N+ + + ++ R +++ ++ G+ + R KV
Sbjct: 20 DTYDKILVVEIDNVGSKQLQDARRELRALDSVILCGKNTVIRKTLKDRVSRKPALEKVLH 79
Query: 84 FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLR 143
L GN T EV + + A+ G A V +P GP +M F +
Sbjct: 80 ALRGNVSFVFTRGDLREVRDCILRNKVPAPAKAGQIAQCDVFVPAGP-TGMPPDMTSFFQ 138
Query: 144 KQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
+P ++ +G + +VSD V ++ + +S + +L+ +GI+ T+ + +
Sbjct: 139 ALSIPTKIERGSICIVSDVQVIKQNERVSASAVALLQRMGIEPFTYGMKI 188
>gi|134046441|ref|YP_001097926.1| acidic ribosomal protein P0 [Methanococcus maripaludis C5]
gi|166223882|sp|A4FZS8.1|RLA0_METM5 RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|132664066|gb|ABO35712.1| LSU ribosomal protein L10P [Methanococcus maripaludis C5]
Length = 335
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 14/93 (15%)
Query: 115 RTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPE 174
+ GST +P GP F E L+ G+P ++KG + + D VV +EG+ +S +
Sbjct: 130 KAGSTG-----MPPGP---FLSE----LKAVGLPAAIDKGKIGIKEDTVVVKEGEVVSQK 177
Query: 175 SARILRLLGIKMATFKLHLICRWSAEDFELYRE 207
+ +L LGIK T L+++ + ED +Y E
Sbjct: 178 LSVVLSALGIKPVTVGLNVLGVY--EDGIIYTE 208
>gi|399576666|ref|ZP_10770421.1| LSU ribosomal protein l10p [Halogranum salarium B-1]
gi|399238110|gb|EJN59039.1| LSU ribosomal protein l10p [Halogranum salarium B-1]
Length = 346
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 93/217 (42%), Gaps = 40/217 (18%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFR------EQIKPSRLLWVGRYPMRYSQAYK 80
V+ + + +E Y S+ + + + + + R +++ SR V R + + +
Sbjct: 21 VDELVDFIEGYSSVGIVGVAGIPSKQLQNMRRGLHGKAEVRMSRNTLVTRALEQVDEGVE 80
Query: 81 -VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPEGPLEQ 133
+++F+ G L TN ++ F +++ + ++T G A + +PEG
Sbjct: 81 DLTEFVAGQVALIGTN------DNPFGLFKELEASKTPAPINAGEVAPNDIVIPEG---D 131
Query: 134 FTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
+ PF L++ G R+ G + + D V EG+ +S E + +L LGI+
Sbjct: 132 TGVDPGPFVGELQQVGASARIMDGSITVTEDSTVLSEGEVVSEELSNVLSELGIEPKEVG 191
Query: 191 LHLICRWS----------AEDFELYREGLDESDVESA 217
L L +S A D + YR +D++SA
Sbjct: 192 LDLKSVYSEGVLFAPEELAIDIDEYR-----ADIQSA 223
>gi|78191424|gb|ABB29933.1| P0 ribosomal protein-like [Solanum tuberosum]
gi|82623393|gb|ABB87111.1| P0 ribosomal protein-like [Solanum tuberosum]
Length = 320
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 79/176 (44%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY----------KV 81
++++ + V + +N+ + + + R+ ++ ++ +G+ M R + + +
Sbjct: 22 LDDFTQVLVAAADNVGSNQLQSIRKGLRGDSVVLMGKNTMMKRTIRVHAEKTGNETILNL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 IPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPVDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG VE+++ + ++G + A +L LGI+ ++ L ++ +
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVVSVY 196
>gi|326494674|dbj|BAJ94456.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 320
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 21/195 (10%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY----------KV 81
+E Y + + +N+ + + +E R+ ++ ++ +G+ + R + + ++
Sbjct: 22 LEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNKDFLEL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
S L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 SNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICR----- 196
+ +P ++NKG VE+ + ++G + + +L LGI+ ++ L +IC
Sbjct: 141 FQVLNIPTKINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGL-VICNVYDSG 199
Query: 197 --WSAEDFELYREGL 209
+S E +L E L
Sbjct: 200 SVFSPEVLDLTEEDL 214
>gi|326516500|dbj|BAJ92405.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 320
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 21/195 (10%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY----------KV 81
+E Y + + +N+ + + +E R+ ++ ++ +G+ + R + + ++
Sbjct: 22 LEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHSEKTGNKDFLEL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
S L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 SNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICR----- 196
+ +P ++NKG VE+ + ++G + + +L LGI+ ++ L +IC
Sbjct: 141 FQVLNIPTKINKGTVEITIPVELIKKGDKVGSSESALLAKLGIRPFSYGL-VICNVYDSG 199
Query: 197 --WSAEDFELYREGL 209
+S E +L E L
Sbjct: 200 SVFSPEVLDLTEEDL 214
>gi|448731739|ref|ZP_21714032.1| acidic ribosomal protein P0 [Halococcus salifodinae DSM 8989]
gi|445805638|gb|EMA55840.1| acidic ribosomal protein P0 [Halococcus salifodinae DSM 8989]
Length = 356
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 81/209 (38%), Gaps = 40/209 (19%)
Query: 12 LSKTKKKGKEHKEVI-------VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSR 64
+S + G E I V + +E Y+S+ V S + + + + R ++
Sbjct: 1 MSAESEAGDRRTEAIPEWKREEVADLAELIETYESVGVVSIGGIPSRQLQAMRRELHGDA 60
Query: 65 LLWVGRYPMRYSQAYKVSKFLC-------GNTGLFLTNMPKEEVESLFNKYEDYDFART- 116
L V R + + + + G GL T+ E+ F Y + ++T
Sbjct: 61 ELRVARNTLLVRALDEAGEGIADLTSEIEGQVGLIGTD------ENPFGLYRQLEASKTP 114
Query: 117 -----GSTATEKVELPE-------GPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVV 164
G A ++ +PE GP F E L++ G R+ G + + D V
Sbjct: 115 APINAGEIAPNEITIPESDTGVDPGP---FVGE----LQQVGAAARIMDGSIHVTEDSTV 167
Query: 165 CEEGKPLSPESARILRLLGIKMATFKLHL 193
EEG+ +S + A +L LGI+ L L
Sbjct: 168 LEEGEEVSGQLANVLGELGIEPKEVGLDL 196
>gi|311334512|emb|CBN08637.1| ribosomal protein, large, P0 [Microcosmus squamiger]
Length = 311
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 73/175 (41%), Gaps = 21/175 (12%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQAYKVSK 83
+E Y +V +N+ + + ++ R ++ + +G+ M ++
Sbjct: 21 LEQYPKCFVVGADNVSSRQMQKIRASLRDQATVLMGKNTMMRKAIKGHLQNNPDLERLLP 80
Query: 84 FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE-----GPLEQFTHEM 138
+ GN GL T+ EV L + + AR G+ + V +P GP E
Sbjct: 81 HIKGNVGLVFTDSDLTEVRDLLLENKVAAPARAGAISPVDVVIPAQNTGLGP------EK 134
Query: 139 EPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
F + + ++++G +E++S+ + + G + A +L +L I T+ L +
Sbjct: 135 TSFFQALAIQTKISRGTIEIISNVHILKPGDKVGASEATLLNMLKISPFTYGLEI 189
>gi|229365844|gb|ACQ57902.1| 60S acidic ribosomal protein P0 [Anoplopoma fimbria]
Length = 315
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 75/179 (41%), Gaps = 21/179 (11%)
Query: 30 IRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQAY 79
I +++Y ++ +N+ + + + R ++ ++ +G+ M
Sbjct: 17 IIQLLDDYPKCFIVGADNVGSKQMQTIRLSLRSKAVVLMGKNTMMRKAIRGHLENNPALE 76
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE-----GPLEQF 134
K+ + GN G T EV L + AR G+ A +V +P GP
Sbjct: 77 KLLPHIKGNVGFVFTKEDLAEVRDLLLTNKVPASARAGAIAPCEVTVPAQNTGLGP---- 132
Query: 135 THEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
E F + G+ ++++G +E++SD + + G + A +L +L I ++ L++
Sbjct: 133 --EKTSFFQALGITTKISRGTIEILSDVGLIKPGDKVGASEATLLNMLNISPFSYGLNI 189
>gi|17506815|ref|NP_492766.1| Protein RLA-0 [Caenorhabditis elegans]
gi|2500216|sp|Q93572.3|RLA0_CAEEL RecName: Full=60S acidic ribosomal protein P0
gi|3876334|emb|CAB02098.1| Protein RLA-0 [Caenorhabditis elegans]
Length = 312
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 23/186 (12%)
Query: 35 ENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQAYKVSKF 84
E Y + +N+ + + +E R+ ++ + +G+ M + K+
Sbjct: 22 EEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKALRGHLGKNPSLEKLLPH 81
Query: 85 LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE-----GPLEQFTHEME 139
+ N G T E+ S + A+ G+ A V+LP GP E
Sbjct: 82 IVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGP------EKT 135
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
F + +P ++ +G +E+++D + +EG + + +L +LG+ F L+ R
Sbjct: 136 SFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGV--TPFSYGLVVRQVY 193
Query: 200 EDFELY 205
+D LY
Sbjct: 194 DDGTLY 199
>gi|332717325|gb|AEE99002.1| acidic ribosomal protein P0 [Euplotes octocarinatus]
Length = 333
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 83 KFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFL 142
K L GN G+ TN +++ + ++ A+ G+ A V + GP + F
Sbjct: 99 KLLKGNLGIIFTNHDLTDIKDIVERHAREAPAKVGANAQCDVWIRAGP-TGLDPKQTLFF 157
Query: 143 RKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
+ +P ++ K +E+ SD + EG + A +L+ L I ++KL +
Sbjct: 158 QNLQIPTKIAKTQIEITSDKQIIFEGDKIGSNEAALLQKLNINPFSYKLKV 208
>gi|193875762|gb|ACF24517.1| 60S ribosomal protein L10 [Gymnochlora stellata]
Length = 252
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 37 YKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-RY-----------SQAYKVSKF 84
Y+ I F +N+++ + + R+ ++ + VG+ + RY S+ +++
Sbjct: 12 YRFIIFFKLKNIKSKQIHDVRKFLRNRAEIIVGKKTLLRYYLNNIDGKISTSKVRQLTAN 71
Query: 85 LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRK 144
L N GL TN + SL Y + A+ G+ A + +++ +G ++ + F +
Sbjct: 72 LKNNVGLLFTNTDPYCINSLLKNYCVKETAKAGTLAKKDIKIKKGI-KRLSPSQTSFFQA 130
Query: 145 QGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
G+P R+ KG +E++ + ++ ++ K ++ +L+ L I+
Sbjct: 131 LGIPTRVTKGSIEILENILLVKKNKVINSSHEVLLKKLNIR 171
>gi|374630404|ref|ZP_09702789.1| LSU ribosomal protein L10P [Methanoplanus limicola DSM 2279]
gi|373908517|gb|EHQ36621.1| LSU ribosomal protein L10P [Methanoplanus limicola DSM 2279]
Length = 284
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 86/198 (43%), Gaps = 14/198 (7%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGR-------YPMRYSQAY 79
V I+ E YK + + F+ + + ++ R ++ S +L + R + +
Sbjct: 16 VEEIKRHAEEYKLVGLVDFQGIPASQMQQMRRNLRGSAVLKMTRNTLIEHAFAEMGGEIE 75
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYD---FARTGSTATEKVELPEGPLEQFTH 136
++ + G++ L TN E L+ K ++ A+ G + E + +P+GP
Sbjct: 76 GINNHIEGHSALIFTN---ENPFRLYKKLQETMTKMAAKPGEVSPEDITVPKGPTSFPPG 132
Query: 137 EMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL-IC 195
+ L++ G+P + G V + V +EG+ ++ + A +L L IK L L I
Sbjct: 133 PIVGQLQQAGIPAAITGGKVVIRETKTVVKEGEVINAKMADVLSKLDIKPIDVGLSLQIA 192
Query: 196 RWSAEDFELYREGLDESD 213
+ FE +DE++
Sbjct: 193 FYEGTFFEPKTLAIDETE 210
>gi|409078239|gb|EKM78602.1| hypothetical protein AGABI1DRAFT_114222 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426199231|gb|EKV49156.1| hypothetical protein AGABI2DRAFT_191238 [Agaricus bisporus var.
bisporus H97]
Length = 312
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 81/186 (43%), Gaps = 19/186 (10%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------ 73
+ K+V ++ + Y S+++ + +N+ + + + R ++ ++ +G+ M
Sbjct: 5 RADKQVYFEKLKELLYAYPSVFIVNVDNVGSNQMHQIRVALRGKGVVLMGKNTMVRRALR 64
Query: 74 ----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
Q ++ + GN G T +E+ + + AR G+ A + V +P G
Sbjct: 65 TLIPESPQFERLLPHVRGNVGFVFTKSDLKEIRDIIVANKVAAPARAGAFAPKDVIVPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + G+P ++ +G +E+VSD V + P A +L +L I
Sbjct: 125 -----NTGMEPGKTSFFQALGIPTKIARGTIEIVSDVKVVTALTRVGPSEATLLNMLNIS 179
Query: 186 MATFKL 191
T+ +
Sbjct: 180 PFTYGM 185
>gi|378754523|gb|EHY64554.1| hypothetical protein NERG_02364 [Nematocida sp. 1 ERTm2]
Length = 211
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 92 FLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPL---------EQFTHEMEPFL 142
LT++P+E+++S+ K +D+ R G T + + +P G L E++ L
Sbjct: 93 LLTDLPQEKIQSIVEKVTHFDYERKGDTLCKDIVIPVGELLNEESVKVSNTLFKEIQA-L 151
Query: 143 RKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
Q + + +E+ V+ +G+ ++ E ++ ++LG+K
Sbjct: 152 GIQNIIINPKTNSIEVTEQIVLARKGEHMTEEQEKMAKILGLK 194
>gi|123489652|ref|XP_001325439.1| ribosomal protein L10 [Trichomonas vaginalis G3]
gi|121908338|gb|EAY13216.1| ribosomal protein L10, putative [Trichomonas vaginalis G3]
Length = 235
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 76/179 (42%), Gaps = 11/179 (6%)
Query: 17 KKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKP-SRLLWVGRYPMRY 75
K ++K+ + + NY + V + + +++ + + R I + +++ MR
Sbjct: 5 KSAHQNKDDYFKILHDLFHNYNKVAVVTSQQVKSNQLMKIRTDISSFAEIVFCKNSLMRR 64
Query: 76 S---------QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVEL 126
+ ++ K+L GL TN + ++ + + Y A+ GS A V +
Sbjct: 65 AVDQLKREIPSITELEKYLTNGAGLIFTNGSFKAIKEVIDANCRYSAAKAGSIAPCDVII 124
Query: 127 PEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
+E F Q +P ++ KG +E+ + +G+ + AR+L +LGIK
Sbjct: 125 KRQLTSIPYYEYNLFFDLQ-IPCKIFKGTIEVAGKKQLVWKGQKIRASEARVLEMLGIK 182
>gi|408382759|ref|ZP_11180301.1| acidic ribosomal protein P0 [Methanobacterium formicicum DSM 3637]
gi|407814561|gb|EKF85186.1| acidic ribosomal protein P0 [Methanobacterium formicicum DSM 3637]
Length = 334
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 73/166 (43%), Gaps = 8/166 (4%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--------RYSQA 78
V +++ +E++ + + ++ + ++ R+ ++ S L + R + + S
Sbjct: 12 VKELKDLIESHTVVGMADLSDIPAPQLQKMRQSLRGSAKLKMSRKTLMDLALNDSKKSNV 71
Query: 79 YKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEM 138
+ + G L T+M ++ + + AR GSTA + +P+G +
Sbjct: 72 KVLVDHMDGQPALIFTDMNPFKLYKILEDSKTPAPARAGSTAIADIVVPKGDTGFMPGPI 131
Query: 139 EPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
L+K G+P ++ KG + + D + EG +S + A +L L I
Sbjct: 132 LGELQKIGIPAKIEKGKIVVTEDKTIVAEGDVISRDVAGMLTRLDI 177
>gi|242080463|ref|XP_002445000.1| hypothetical protein SORBIDRAFT_07g002560 [Sorghum bicolor]
gi|241941350|gb|EES14495.1| hypothetical protein SORBIDRAFT_07g002560 [Sorghum bicolor]
Length = 319
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 84/196 (42%), Gaps = 19/196 (9%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAYK----------V 81
++ Y + + +N+ + + ++ R ++ ++ +G+ + R +AY +
Sbjct: 22 LDEYTKVLIALADNVGSKQLQDIRRGLRGDSVVLMGKNTLIRRCIKAYAEKTGNHTFDPL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 MDLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI------C 195
+ +P ++NKG VE+++ + ++G + + +L LGI+ ++ L +
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLQVTNVYEDGS 200
Query: 196 RWSAEDFELYREGLDE 211
+S E +L E L E
Sbjct: 201 VFSPEVLDLSEEDLIE 216
>gi|387593395|gb|EIJ88419.1| hypothetical protein NEQG_01109 [Nematocida parisii ERTm3]
gi|387597052|gb|EIJ94672.1| hypothetical protein NEPG_00195 [Nematocida parisii ERTm1]
Length = 210
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 92 FLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPL---------EQFTHEMEPFL 142
L+++P+E+V+S+ ++ D+ + G T + + LP G L E+E L
Sbjct: 92 LLSDLPQEKVQSIVDRISHLDYEKVGDTLSSDIVLPVGELLNEESVKVSNTLFKEIEK-L 150
Query: 143 RKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
Q + + +E+ V+ +G+ ++ E A++ +++G+K
Sbjct: 151 GIQNIIINPKTNSIEVTEQIVLGRKGEQMTEEQAKMSKIIGLK 193
>gi|219850848|ref|YP_002465280.1| acidic ribosomal protein P0 [Methanosphaerula palustris E1-9c]
gi|219545107|gb|ACL15557.1| ribosomal protein L10 [Methanosphaerula palustris E1-9c]
Length = 284
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Query: 81 VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP 140
+ ++ GN+ + TN ++ L K + A+ G A E + +P+GP +
Sbjct: 77 IKDYISGNSAMIFTNENPFKLYKLLAKTQTKMAAKAGQIAPEDIVVPKGPTSFKPGPIVG 136
Query: 141 FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICR-WSA 199
L++ G+P + G V++ V + G ++ + A +L L IK L L +
Sbjct: 137 ELQQAGIPAAIEAGKVKIKETKTVVKAGGVINAKLATVLAKLDIKPVDVGLMLQAAFYQG 196
Query: 200 EDFELYREGLDES 212
FE +DES
Sbjct: 197 SIFEPSTLNIDES 209
>gi|448578427|ref|ZP_21643862.1| acidic ribosomal protein P0 [Haloferax larsenii JCM 13917]
gi|445726968|gb|ELZ78584.1| acidic ribosomal protein P0 [Haloferax larsenii JCM 13917]
Length = 346
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 81/183 (44%), Gaps = 25/183 (13%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFR------EQIKPSRLLWVGRYPMRYSQAYK 80
V+ + + +E Y+S+ V + + + + R Q++ SR V R ++
Sbjct: 20 VDELVDFIEGYESVGVVGVAGIPSRQLQAMRRELHGSAQVRMSRNTLVNRALDEVDDGFE 79
Query: 81 -VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPEGPLEQ 133
+ +++ G L TN ++ F +++ + ++T G A + +PEG
Sbjct: 80 ELKEYVAGQVALIGTN------DNPFALFKELEASKTPAPINAGEVAPNDIVIPEG---D 130
Query: 134 FTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
+ PF L++ G R+ G +++ D V +EG+ +S E + +L LGI+
Sbjct: 131 TGVDPGPFVGELQQVGASARIMDGSIKVTEDSQVLDEGEEVSEELSNVLAELGIEPKEVG 190
Query: 191 LHL 193
L L
Sbjct: 191 LDL 193
>gi|82617222|emb|CAI64128.1| acidic ribosomal protein P0 [uncultured archaeon]
gi|268322954|emb|CBH36542.1| 50S ribosomal protein L10E [uncultured archaeon]
Length = 313
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 5/199 (2%)
Query: 12 LSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRY 71
+ K K+ ++ KE V SI + + +Y +I + + + + + R++ + LL V +
Sbjct: 1 MKKKVKRARKWKEEQVASINSLLGSYDTIGLAKIRGLGSKQLQRIRKEFRGDALLKVSKN 60
Query: 72 PMRY-----SQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVEL 126
M S + F+ L T++ + + K + + G+ A + +
Sbjct: 61 SMIARSFGGSGMNDMVDFIDDQMALIFTDLDAFALYKVLEKGKIPAPIKAGAVAPIDIVI 120
Query: 127 PEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKM 186
EGP + L+ G+P ++ G V + V EEG+ +SPE A +L L I
Sbjct: 121 EEGPTSLRPGPVVGELQNLGIPSGIDGGKVVVKQRKVAVEEGEIVSPELADMLAKLEIYP 180
Query: 187 ATFKLHLICRWSAEDFELY 205
T L L + + + L+
Sbjct: 181 ITEGLDLCAVYDSGESVLF 199
>gi|448592503|ref|ZP_21651610.1| acidic ribosomal protein P0 [Haloferax elongans ATCC BAA-1513]
gi|445731508|gb|ELZ83092.1| acidic ribosomal protein P0 [Haloferax elongans ATCC BAA-1513]
Length = 347
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 81/183 (44%), Gaps = 25/183 (13%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFR------EQIKPSRLLWVGRYPMRYSQAYK 80
V+ + + +E Y+S+ V + + + + R Q++ SR V R ++
Sbjct: 20 VDELVDFIEGYESVGVVGVAGIPSRQLQAMRRELHGSAQVRMSRNTLVNRALDEVDDGFE 79
Query: 81 -VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPEGPLEQ 133
+ +++ G L TN ++ F +++ + ++T G A + +PEG
Sbjct: 80 GLKEYVAGQVALIGTN------DNPFALFKELEASKTPAPINAGEVAPNDIVIPEG---D 130
Query: 134 FTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
+ PF L++ G R+ G +++ D V +EG+ +S E + +L LGI+
Sbjct: 131 TGVDPGPFVGELQQVGASARIMDGSIKVTEDSQVLDEGEEVSEELSNVLAELGIEPKEVG 190
Query: 191 LHL 193
L L
Sbjct: 191 LDL 193
>gi|239799221|dbj|BAH70543.1| ACYPI000079 [Acyrthosiphon pisum]
Length = 314
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/168 (19%), Positives = 72/168 (42%), Gaps = 21/168 (12%)
Query: 32 NAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQAYKV 81
N ++ + ++ +N+ + + ++ R ++ + ++ +G+ M R K+
Sbjct: 19 NLLDEFPKCFIVGADNVGSKQMQQIRISLRGNAVVLMGKNTMMRKAIKGHIDRNQSLEKI 78
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE-----GPLEQFTH 136
+ GN G T E+ + + AR G+ A V +P GP +
Sbjct: 79 MPHIRGNVGFVFTRSDLVEIRDKLLENKVRAPARPGAIAPCPVVIPAQNTGLGPGKT--- 135
Query: 137 EMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
F + +P +++KG +E+++D + +EG + A +L +L I
Sbjct: 136 ---SFFQALSIPTKISKGTIEIINDVHILKEGDKVGASEATLLNMLNI 180
>gi|396081362|gb|AFN82979.1| hypothetical protein EROM_050460 [Encephalitozoon romaleae SJ-2008]
Length = 186
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 67/179 (37%), Gaps = 35/179 (19%)
Query: 17 KKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYS 76
KK KE ++ + IRN E Y + V + N+ K+ RE K + + R M S
Sbjct: 6 KKNKEKRQAEMEKIRNYAEKYPLVAVIENPGIPNVILKKIREDFKGTSKILFTRKKMA-S 64
Query: 77 QAYKVSKFLCGNTGLFLTNMPKEEVESLF------------NKYEDYDFARTGSTATEKV 124
Y NMP +S F YE DF +V
Sbjct: 65 AVY---------------NMPSMPADSFFLMFGDEGAIEKAKSYEYEDFLEENDICPSRV 109
Query: 125 ELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLG 183
+ + + EM L PV + ++L D+VVCE G+ + A+IL+ G
Sbjct: 110 VIEKQVVRN--KEMIEIL-----PVTMKDEKMQLNEDYVVCEAGETVDERKAKILKFFG 161
>gi|353235061|emb|CCA67079.1| probable RPP0-acidic ribosomal protein L10.e [Piriformospora indica
DSM 11827]
Length = 367
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMR----- 74
+ KE+ ++ + Y SI++ + +N+ + + + R ++ ++ +G+ M
Sbjct: 5 RAQKELYFTKLKELLVKYPSIFIVNVDNVGSNQMHQIRTALRGKGVVLMGKNTMVRRALR 64
Query: 75 --YSQAYKVSKFLC---GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG 129
+++ + + L GN G T+ ++V + + AR G+ A V +P G
Sbjct: 65 NILTESPQFERLLPNVKGNIGFVFTSGDLKDVREIIVANKVKAPARAGAVAPVDVVVPAG 124
Query: 130 PLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
MEP F + +P ++ +G +E+VSD V +G + P A +L +L I
Sbjct: 125 -----NTGMEPGKTSFFQALQIPTKIARGTIEIVSDIKVVVKGNKVGPSEATLLNMLNIS 179
Query: 186 MATFKL 191
T+ +
Sbjct: 180 PFTYGM 185
>gi|389848192|ref|YP_006350431.1| 50S ribosomal protein L10 [Haloferax mediterranei ATCC 33500]
gi|448618399|ref|ZP_21666636.1| acidic ribosomal protein P0 [Haloferax mediterranei ATCC 33500]
gi|388245498|gb|AFK20444.1| ribosomal protein L10 [Haloferax mediterranei ATCC 33500]
gi|445746770|gb|ELZ98228.1| acidic ribosomal protein P0 [Haloferax mediterranei ATCC 33500]
Length = 344
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 101/235 (42%), Gaps = 47/235 (20%)
Query: 16 KKKGKEHKEVI-------VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ------IKP 62
+ G EVI V + + +++Y+S+ V + + + + R + ++
Sbjct: 2 SESGTRQTEVIPQWKRDEVEELVDFIDSYESVGVVGVAGIPSKQLQAMRRELHGSAAVRM 61
Query: 63 SRLLWVGRYPMRYSQAYK-VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART----- 116
SR V R + ++ + +++ G L TN ++ F Y++ + ++T
Sbjct: 62 SRNTLVNRALDEVNDGFEELKEYIAGQVALIGTN------DNPFALYKELEASKTPAPIN 115
Query: 117 -GSTATEKVELPEGPLEQFTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLS 172
G A + +PEG + PF L++ G R+ +G +++ D V +EG+ +S
Sbjct: 116 AGEVAPNDIVIPEG---DTGVDPGPFVGELQQVGASARIMEGSIKVTEDSHVLDEGEEVS 172
Query: 173 PESARILRLLGIKMATFKLHLICRWS----------AEDFELYREGLDESDVESA 217
E A +L LGI+ L L +S A D + YR +D++SA
Sbjct: 173 EELANVLVELGIEPKEVGLDLRGVFSEGVLFEPDELAIDVDEYR-----ADIQSA 222
>gi|145332006|ref|NP_001078125.1| 60S acidic ribosomal protein P0-2 [Arabidopsis thaliana]
gi|332641216|gb|AEE74737.1| 60S acidic ribosomal protein P0-2 [Arabidopsis thaliana]
Length = 287
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 84 FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLR 143
L GN GL T +EV KY+ AR G A V + G F +
Sbjct: 50 LLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGN-TGLDPSQTSFFQ 108
Query: 144 KQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
+P ++NKG VE+++ + ++G + A +L LGI+ ++ L
Sbjct: 109 VLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGL 156
>gi|413941829|gb|AFW74478.1| hypothetical protein ZEAMMB73_076912 [Zea mays]
Length = 197
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAYK----------V 81
++ Y + + +N+ + + ++ R ++ ++ +G+ + R + Y +
Sbjct: 22 LDEYTKVLIALADNVGSKQLQDIRRGLRGDSVVLMGKNTLIRRCIKVYAEKTGNHTFDPL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 MDLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG VE+++ + ++G+ + + +L LGI+ ++ L + +
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIKKGEKVGSSESALLAKLGIRPFSYGLQVTSVY 196
>gi|300711074|ref|YP_003736888.1| acidic ribosomal protein P0 [Halalkalicoccus jeotgali B3]
gi|448296830|ref|ZP_21486880.1| acidic ribosomal protein P0 [Halalkalicoccus jeotgali B3]
gi|299124757|gb|ADJ15096.1| acidic ribosomal protein P0 [Halalkalicoccus jeotgali B3]
gi|445580507|gb|ELY34885.1| acidic ribosomal protein P0 [Halalkalicoccus jeotgali B3]
Length = 348
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 91/210 (43%), Gaps = 32/210 (15%)
Query: 12 LSKTKKKGKEHKEVI-------VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSR 64
+S T+ +G+ E + V+ + +++Y+S+ V + + + + + R + S
Sbjct: 1 MSTTQAEGERKTENLPEWKREEVDELVEMLDSYESVGVVNIAGIPSRQLQNMRRDLHGSA 60
Query: 65 LLWVGRYPM--RYSQAY-----KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART- 116
L V R + R +A +++ + G G+ TN ++ F Y+ + +++
Sbjct: 61 ELRVSRNTLLTRALEAVDDGLEQLTGHVAGQVGVIGTN------DNPFGLYKQLEESKSP 114
Query: 117 -----GSTATEKVELPEGPLEQFTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEG 168
G A + +PEG + PF L++ G R+ G + + D V EG
Sbjct: 115 APIGAGEVAPNDIVIPEG---DTGVDPGPFVGELQQVGAAARIQDGSIHVTEDSQVLSEG 171
Query: 169 KPLSPESARILRLLGIKMATFKLHLICRWS 198
+ +S + + +L LGI+ L L +S
Sbjct: 172 EEVSQDLSNVLSELGIEPKEVGLDLRSVYS 201
>gi|304314034|ref|YP_003849181.1| 50S ribosomal protein L10P [Methanothermobacter marburgensis str.
Marburg]
gi|302587493|gb|ADL57868.1| 50S ribosomal protein L10P [Methanothermobacter marburgensis str.
Marburg]
Length = 336
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/169 (18%), Positives = 82/169 (48%), Gaps = 10/169 (5%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGR---YPMRYSQAYK--- 80
V +++ +++++ + + + ++ + ++ R+ ++ S L+ + + + +A K
Sbjct: 12 VQELQDLIKSHEVVGIANLADIPARQLQKMRQTLRDSALIRMSKKTLISLALEKAGKELE 71
Query: 81 ----VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTH 136
+S ++ G L T+M ++ + + A+ G+ A + +P+G
Sbjct: 72 NVDSLSDYMEGQPALIFTDMNPFKLFKILEDSKTPAPAKPGAIAPADIVVPKGDTGFAPG 131
Query: 137 EMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
+ L++ G+P ++ KG + + +D VV + G+ + P+ A IL L I+
Sbjct: 132 PILGELQQIGIPAKIEKGKIVVSNDHVVVKAGEEIPPKVAGILTRLDIQ 180
>gi|148642681|ref|YP_001273194.1| acidic ribosomal protein P0 [Methanobrevibacter smithii ATCC 35061]
gi|222445822|ref|ZP_03608337.1| hypothetical protein METSMIALI_01466 [Methanobrevibacter smithii
DSM 2375]
gi|166223884|sp|A5UKU8.1|RLA0_METS3 RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|148551698|gb|ABQ86826.1| ribosomal protein L10p [Methanobrevibacter smithii ATCC 35061]
gi|222435387|gb|EEE42552.1| ribosomal protein L10 [Methanobrevibacter smithii DSM 2375]
Length = 335
Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 77/171 (45%), Gaps = 16/171 (9%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGR-----YPMRYSQAYK- 80
VN +++ ++ Y I + N+ + +E R+ + ++ + + + A K
Sbjct: 12 VNELKSLIDKYDVIGIVDLLNIPAKQLQEMRKSLHNKAVIRMSKKNLIDLALEDCNASKN 71
Query: 81 ----VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTH 136
+S+ + G + T M ++ + + A+ G+ AT+ + +PEG
Sbjct: 72 NIVDLSEHMEGQVAVIATEMNPFKLYKILEDSKTSAPAKPGAIATDDIVIPEG---DTGF 128
Query: 137 EMEPFL---RKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
E PFL ++ G+P +++KG + + + V+ E G+ +S A L + I
Sbjct: 129 EPGPFLGELQQVGIPAKIDKGKIVVSKETVLVEAGEEVSAAVASTLSRMDI 179
>gi|452209593|ref|YP_007489707.1| LSU ribosomal protein P0 (L10p) [Methanosarcina mazei Tuc01]
gi|452099495|gb|AGF96435.1| LSU ribosomal protein P0 (L10p) [Methanosarcina mazei Tuc01]
Length = 347
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 84/196 (42%), Gaps = 12/196 (6%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKV----- 81
+ +I+ ++++K + E + K ++ R +K +L V R + ++
Sbjct: 19 IENIKELIQSHKVFGMVGIEGILATKIQKIRRDLKDVAVLKVSRNTLTERALNQLGESIP 78
Query: 82 --SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
+++L T L TN ++ L + + + G+ A E + + +GP +
Sbjct: 79 EMTRYLDNQTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPTSFPPGPIL 138
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
L+ G+P ++ G V + VVC+ G+ + + A +L L I L L R +
Sbjct: 139 GELQSAGIPASIDAGKVAVKETKVVCKAGEAVPQKLATMLSKLEIYPLIVGLDL--RAAY 196
Query: 200 EDFELYRE---GLDES 212
+D +Y +DES
Sbjct: 197 DDGTIYEPELLAVDES 212
>gi|162460698|ref|NP_001105482.1| 60S acidic ribosomal protein P0 [Zea mays]
gi|6094102|sp|O24573.3|RLA0_MAIZE RecName: Full=60S acidic ribosomal protein P0
gi|1550814|emb|CAA69256.1| 60S acidic ribosomal protein P0 [Zea mays]
Length = 319
Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 86/193 (44%), Gaps = 16/193 (8%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAYK----------V 81
++ Y + + +N+ + + ++ R ++ ++ +G+ + R + Y +
Sbjct: 22 LDEYTKVLIALADNVGSKQLQDIRRGLRGDSVVLMGKNTLIRRCIKVYAEKTGNHTFDPL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 MDLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAED 201
+ +P ++NKG VE+++ + ++G+ + + +L LGI+ ++ L + + ED
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIKKGEKVGSSESALLAKLGIRPFSYGLQVTSVY--ED 198
Query: 202 FELYR-EGLDESD 213
++ E LD S+
Sbjct: 199 GSVFSPEVLDLSE 211
>gi|219884161|gb|ACL52455.1| unknown [Zea mays]
Length = 319
Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAYK----------V 81
++ Y + + +N+ + + ++ R ++ ++ +G+ + R + Y +
Sbjct: 22 LDEYTKVLIALADNVGSKQLQDIRRGLRGDSVVLMGKNTLIRRCIKVYAEKTGNHTFDPL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 MDLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG VE+++ + ++G+ + + +L LGI+ ++ L + +
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIKKGEKVGSSESALLAKLGIRPFSYGLQVTSVY 196
>gi|226509268|ref|NP_001141489.1| uncharacterized protein LOC100273601 [Zea mays]
gi|194704778|gb|ACF86473.1| unknown [Zea mays]
gi|413921355|gb|AFW61287.1| hypothetical protein ZEAMMB73_391125 [Zea mays]
Length = 319
Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAYK----------V 81
++ Y + + +N+ + + ++ R ++ ++ +G+ + R + Y +
Sbjct: 22 LDEYTKVLIALADNVGSKQLQDIRRGLRGDSVVLMGKNTLIRRCIKVYAEKTGNHTFDPL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 MDLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
+ +P ++NKG VE+++ + ++G+ + + +L LGI+ ++ L + +
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIKKGEKVGSSESALLAKLGIRPFSYGLQVTSVY 196
>gi|194699266|gb|ACF83717.1| unknown [Zea mays]
gi|413941828|gb|AFW74477.1| 60S acidic ribosomal protein P0 [Zea mays]
Length = 319
Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 86/193 (44%), Gaps = 16/193 (8%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAYK----------V 81
++ Y + + +N+ + + ++ R ++ ++ +G+ + R + Y +
Sbjct: 22 LDEYTKVLIALADNVGSKQLQDIRRGLRGDSVVLMGKNTLIRRCIKVYAEKTGNHTFDPL 81
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPF 141
L GN GL T +EV KY+ AR G A V +P G F
Sbjct: 82 MDLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGN-TGLDPSQTSF 140
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAED 201
+ +P ++NKG VE+++ + ++G+ + + +L LGI+ ++ L + + ED
Sbjct: 141 FQVLNIPTKINKGTVEIITPVELIKKGEKVGSSESALLAKLGIRPFSYGLQVTSVY--ED 198
Query: 202 FELYR-EGLDESD 213
++ E LD S+
Sbjct: 199 GSVFSPEVLDLSE 211
>gi|321463232|gb|EFX74249.1| hypothetical protein DAPPUDRAFT_307348 [Daphnia pulex]
Length = 320
Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/168 (19%), Positives = 71/168 (42%), Gaps = 11/168 (6%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQAYKVSK 83
++ Y ++ +N+ + + ++ R ++ ++ +G+ M K+
Sbjct: 21 LDEYPKCFIVGADNVGSKQLQQIRRSLRDHAVVLMGKNTMIRKAIRGHLENNPALEKLLP 80
Query: 84 FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLR 143
+ GN G T +V + AR G+ A V++ E E F +
Sbjct: 81 HIRGNVGFVFTKNDLVDVRDRLTENRVRAPARAGALAPMPVDI-EPQNTGLGPEKTSFFQ 139
Query: 144 KQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
+P +++KG +E+++ V +EG+ + +A +L +L I T+ L
Sbjct: 140 ALSIPTKISKGTIEIITTVNVIKEGERVDASAATLLNMLNISPFTYGL 187
>gi|448546336|ref|ZP_21626500.1| acidic ribosomal protein P0 [Haloferax sp. ATCC BAA-646]
gi|448548323|ref|ZP_21627590.1| acidic ribosomal protein P0 [Haloferax sp. ATCC BAA-645]
gi|448557517|ref|ZP_21632706.1| acidic ribosomal protein P0 [Haloferax sp. ATCC BAA-644]
gi|445702789|gb|ELZ54729.1| acidic ribosomal protein P0 [Haloferax sp. ATCC BAA-646]
gi|445714074|gb|ELZ65841.1| acidic ribosomal protein P0 [Haloferax sp. ATCC BAA-644]
gi|445714418|gb|ELZ66180.1| acidic ribosomal protein P0 [Haloferax sp. ATCC BAA-645]
Length = 348
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 95/217 (43%), Gaps = 40/217 (18%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ------IKPSRLLWVGRYPMRYSQAYK 80
V+ + + +E+Y+S+ V + + + + R + ++ SR V R + ++
Sbjct: 20 VDELVDFIESYESVGVVGVAGIPSRQLQSMRRELHGSAAVRMSRNTLVNRALDEVNDGFE 79
Query: 81 -VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPEGPLEQ 133
+ +++ G L TN ++ F +++ + ++T G A + +PEG
Sbjct: 80 ELKEYIAGQVALIGTN------DNPFALFKELEASKTPAPINAGEVAPNDIVIPEG---D 130
Query: 134 FTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
+ PF L++ G R+ G +++ D V EG+ +S E A +L LGI+
Sbjct: 131 TGVDPGPFVGELQQVGASARIMDGSIKVTEDSNVLSEGEEVSEELANVLAELGIEPKEVG 190
Query: 191 LHLICRWS----------AEDFELYREGLDESDVESA 217
L L +S A D + YR +D++SA
Sbjct: 191 LDLRGVFSEGVLFEPDELAIDVDEYR-----ADIQSA 222
>gi|323508789|dbj|BAJ77288.1| cgd4_2260 [Cryptosporidium parvum]
gi|323510551|dbj|BAJ78169.1| cgd4_2260 [Cryptosporidium parvum]
Length = 310
Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 88 NTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGM 147
N GL EV + +Y AR G A V +P G F + G+
Sbjct: 85 NVGLIFCIDEPSEVRKIIEEYRVPAPARQGVIAPCNVVVPAGA-TGLDPSQTSFFQALGI 143
Query: 148 PVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
++ KG VE+ SD + +EGK ++ A +L+ L IK ++ L +
Sbjct: 144 ATKIVKGQVEIQSDVNLIDEGKKVTASQAVLLQKLNIKPFSYGLKV 189
>gi|67623867|ref|XP_668216.1| ribosomal P protein [Cryptosporidium hominis TU502]
gi|54659401|gb|EAL37979.1| ribosomal P protein [Cryptosporidium hominis]
Length = 310
Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 88 NTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGM 147
N GL EV + +Y AR G A V +P G F + G+
Sbjct: 85 NVGLIFCIDEPSEVRKIIEEYRVPAPARQGVIAPCNVVVPAGA-TGLDPSQTSFFQALGI 143
Query: 148 PVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
++ KG VE+ SD + +EGK ++ A +L+ L IK ++ L +
Sbjct: 144 ATKIVKGQVEIQSDVNLIDEGKKVTASQAVLLQKLNIKPFSYGLKV 189
>gi|66357276|ref|XP_625816.1| ribosomal protein PO like protein of the L10 family
[Cryptosporidium parvum Iowa II]
gi|46226972|gb|EAK87938.1| ribosomal protein PO like protein of the L10 family
[Cryptosporidium parvum Iowa II]
Length = 318
Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 88 NTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGM 147
N GL EV + +Y AR G A V +P G F + G+
Sbjct: 93 NVGLIFCIDEPSEVRKIIEEYRVPAPARQGVIAPCNVVVPAGA-TGLDPSQTSFFQALGI 151
Query: 148 PVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
++ KG VE+ SD + +EGK ++ A +L+ L IK ++ L +
Sbjct: 152 ATKIVKGQVEIQSDVNLIDEGKKVTASQAVLLQKLNIKPFSYGLKV 197
>gi|3914776|sp|O52705.1|RLA0_METTL RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|2895648|gb|AAC64511.1| ribosomal protein L10 [Methanothermococcus thermolithotrophicus]
Length = 338
Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 14/91 (15%)
Query: 115 RTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPE 174
+ GST +P GP F E L+ G+P + KG + + D VV + G+ +S +
Sbjct: 130 KAGSTG-----MPPGP---FLGE----LKSVGIPAAIEKGKIGIKEDKVVAKAGEVVSHK 177
Query: 175 SARILRLLGIKMATFKLHLICRWSAEDFELY 205
A +L LGIK T L+L+ + ED +Y
Sbjct: 178 LAVVLSALGIKPVTVGLNLLAAY--EDGVIY 206
>gi|401826989|ref|XP_003887587.1| 60S acidic ribosomal protein P0 [Encephalitozoon hellem ATCC 50504]
gi|392998593|gb|AFM98606.1| 60S acidic ribosomal protein P0 [Encephalitozoon hellem ATCC 50504]
Length = 266
Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 114 ARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSP 173
A+ G+ A + V + + + T + + + G+ ++ KG VE++S + V EG + P
Sbjct: 109 AKVGNVAQKDVWV-DNCITGMTPDKTSYFQVLGIATKITKGKVEIISPYKVLSEGDRVGP 167
Query: 174 ESARILRLLGIKMATFKLHL 193
A +L +L IK ++K+ +
Sbjct: 168 SQANLLGMLNIKPFSYKMTM 187
>gi|401412674|ref|XP_003885784.1| 60S acidic ribosomal protein P0 [Neospora caninum Liverpool]
gi|147842866|dbj|BAF62528.1| ribosomal phosphoprotein P0 [Neospora caninum]
gi|325120204|emb|CBZ55758.1| 60S acidic ribosomal protein P0 [Neospora caninum Liverpool]
Length = 311
Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 87/195 (44%), Gaps = 22/195 (11%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-------RYSQAYKVSKFLC 86
+E Y + V +++ + + + R ++ ++ +G+ M + S+ ++ K L
Sbjct: 22 LEQYPRVLVVEADHVGSKQMADIRLALRGKAVVLMGKNTMIRTALKQKMSEMPQLEKLLP 81
Query: 87 G---NTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP--- 140
N G EV + + + AR G A V +P GP M+P
Sbjct: 82 LVRLNVGFIFCIEDPAEVRKIVSANKVPAPARQGVFAPIDVFIPAGP-----TGMDPGST 136
Query: 141 -FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
F + G+ ++ KG +E+ ++ + +EG ++ +A +L+ LGIK F+ L +
Sbjct: 137 SFFQALGIATKIVKGQIEIQTEVHLIKEGDKVTASAATLLQKLGIK--PFEYGLAIQHVY 194
Query: 200 EDFELYREG-LDESD 213
+D +Y+ LD +D
Sbjct: 195 DDGSVYKASVLDITD 209
>gi|448565331|ref|ZP_21636198.1| acidic ribosomal protein P0 [Haloferax prahovense DSM 18310]
gi|445715075|gb|ELZ66831.1| acidic ribosomal protein P0 [Haloferax prahovense DSM 18310]
Length = 346
Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 40/217 (18%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ------IKPSRLLWVGRYPMRYSQAYK 80
V+ + + +E+Y+S+ V + + + + R + ++ SR V R ++
Sbjct: 20 VDELVDFIESYESVGVVGVAGIPSRQLQAMRRELHGSAAVRMSRNTLVNRALDEVDDGFE 79
Query: 81 -VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPEGPLEQ 133
+ +++ G L TN ++ F +++ + ++T G A + +PEG
Sbjct: 80 DLKEYIAGQVALIGTN------DNPFALFKELEASKTPAPINAGEVAPNDIVIPEG---D 130
Query: 134 FTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
+ PF L++ G R+ G +++ D V EG+ +S E A +L LGI+
Sbjct: 131 TGVDPGPFVGELQQVGASARIMDGSIKVTEDSNVLSEGEEVSEELANVLAELGIEPKEVG 190
Query: 191 LHLICRWS----------AEDFELYREGLDESDVESA 217
L L +S A D + YR +D++SA
Sbjct: 191 LDLRGVFSEGVLFEPDELAIDVDEYR-----ADIQSA 222
>gi|21227115|ref|NP_633037.1| acidic ribosomal protein P0 [Methanosarcina mazei Go1]
gi|23822065|sp|Q8PY51.1|RLA0_METMA RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|20905444|gb|AAM30709.1| LSU ribosomal protein L10P [Methanosarcina mazei Go1]
Length = 347
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 84/196 (42%), Gaps = 12/196 (6%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKV----- 81
+ +I+ ++++K + E + K ++ R +K +L V R + ++
Sbjct: 19 IENIKELIQSHKVFGMVRIEGILATKIQKIRRDLKDVAVLKVSRNTLTERALNQLGESIP 78
Query: 82 --SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
+++L T L TN ++ L + + + G+ A E + + +GP +
Sbjct: 79 EMTRYLDNQTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPTSFPPGPIL 138
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
L+ G+P ++ G V + VVC+ G+ + + A +L L I L L R +
Sbjct: 139 GELQSAGIPASIDAGKVAVKETKVVCKAGEAVPQKLATMLSKLEIYPLIVGLDL--RAAY 196
Query: 200 EDFELYRE---GLDES 212
+D +Y +DES
Sbjct: 197 DDGTIYEPELLAVDES 212
>gi|268566771|ref|XP_002639809.1| C. briggsae CBR-RPA-0 protein [Caenorhabditis briggsae]
Length = 312
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 76/186 (40%), Gaps = 23/186 (12%)
Query: 35 ENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQAYKVSKF 84
E Y + +N+ + + +E R+ ++ + +G+ M + K+
Sbjct: 22 EEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKALRGHLGKNPSLEKLLPH 81
Query: 85 LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE-----GPLEQFTHEME 139
+ N G T E+ S + A+ G+ A V+LP GP E
Sbjct: 82 IVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGP------EKT 135
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
F + +P ++ +G +E++++ + +EG + + +L +LG+ F L+ R
Sbjct: 136 SFFQALQIPTKIARGTIEILNEVHLIKEGDKVGASESALLNMLGV--TPFSYGLVVRQVY 193
Query: 200 EDFELY 205
+D LY
Sbjct: 194 DDGTLY 199
>gi|261349633|ref|ZP_05975050.1| acidic ribosomal protein P0-like protein [Methanobrevibacter
smithii DSM 2374]
gi|288861591|gb|EFC93889.1| acidic ribosomal protein P0-like protein [Methanobrevibacter
smithii DSM 2374]
Length = 335
Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 77/171 (45%), Gaps = 16/171 (9%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGR-----YPMRYSQAYK- 80
VN +++ ++ Y I + N+ + +E R+ + ++ + + + A K
Sbjct: 12 VNELKSLIDKYDVIGIVDLLNIPAKQLQEMRKSLHNKAVIRMSKKNLIDLALEDCNASKN 71
Query: 81 ----VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTH 136
+S+ + G + T M ++ + + A+ G+ AT+ + +PEG
Sbjct: 72 NIVDLSEHMEGQVAVIATEMNPFKLYKILEDSKTSAPAKPGAIATDDIVIPEG---DTGF 128
Query: 137 EMEPFL---RKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
E PFL ++ G+P +++KG + + + V+ E G+ +S A L + I
Sbjct: 129 EPGPFLGELQQVGIPAKIDKGKIVVSKETVLVEAGEEVSVAVASTLSRMDI 179
>gi|308499693|ref|XP_003112032.1| CRE-RPA-0 protein [Caenorhabditis remanei]
gi|308268513|gb|EFP12466.1| CRE-RPA-0 protein [Caenorhabditis remanei]
Length = 312
Score = 39.7 bits (91), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 76/186 (40%), Gaps = 23/186 (12%)
Query: 35 ENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQAYKVSKF 84
E Y + +N+ + + +E R+ ++ + +G+ M + K+
Sbjct: 22 EEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKALRGHLGKNPSLEKLLPH 81
Query: 85 LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE-----GPLEQFTHEME 139
+ N G T E+ S + A+ G+ A V+LP GP E
Sbjct: 82 IVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGP------EKT 135
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
F + +P ++ +G +E++++ + +EG + + +L +LG+ F L+ R
Sbjct: 136 SFFQALQIPTKIARGTIEILNEVHLIKEGDKVGASESALLNMLGV--TPFSYGLVVRQVY 193
Query: 200 EDFELY 205
+D LY
Sbjct: 194 DDGTLY 199
>gi|296242678|ref|YP_003650165.1| 50S ribosomal protein L10 [Thermosphaera aggregans DSM 11486]
gi|296095262|gb|ADG91213.1| LSU ribosomal protein L10P [Thermosphaera aggregans DSM 11486]
Length = 332
Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 48/110 (43%)
Query: 84 FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLR 143
L G +F TN +V + D+ + G +++ +PEG M
Sbjct: 80 LLTGQNIVFFTNENPFDVALKIHNIVTMDYYKPGEKTDKEIVIPEGNTGIPPGPMLSVFG 139
Query: 144 KQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
K + ++ V+ + D VV + G +SPE + IL+ LG+ + +L L
Sbjct: 140 KLKIQTKVQANVIHVAKDTVVAKPGDVISPELSSILQKLGLALKEIRLRL 189
>gi|110456380|gb|ABG74704.1| putative acidic p0 ribosomal protein, partial [Diaphorina citri]
Length = 220
Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 114 ARTGSTATEKVELPE-----GPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
AR G+ A V +P GP E F + +P +++KG +E+++D + +EG
Sbjct: 15 ARNGAIAPCPVTIPAQNTGLGP------EKTSFFQALSIPTKISKGTIEIINDVHILKEG 68
Query: 169 KPLSPESARILRLLGIKMATFKL 191
+ P A +L +L I ++ L
Sbjct: 69 DKVGPSEATLLNMLNISPFSYGL 91
>gi|323447734|gb|EGB03645.1| hypothetical protein AURANDRAFT_39285 [Aureococcus anophagefferens]
Length = 323
Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 13/177 (7%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQ 77
+E K+ + ++ Y I++ S +N+ + +F++ R ++ ++ +G+ M +
Sbjct: 5 RERKQEYFEKMEGLLDMYSKIFIVSCDNVGSKQFQQIRIALRGEAVVLMGKNTMMRKVVT 64
Query: 78 AYKVSKF----------LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELP 127
AY V + GN G TN +V L AR G+ A V +P
Sbjct: 65 AYLVKNPGHPYEMLLPKIMGNIGFVFTNGDLGKVRELIEDNRVPAPARVGAIAPIDVIVP 124
Query: 128 EGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
GP + + F + + ++ KG +E+ S + + G + A +L+ L I
Sbjct: 125 PGPTDCDPGQTN-FFQTLQIATKIVKGRIEITSPVNLLKAGDKVGNSEAVLLQKLHI 180
>gi|323447498|gb|EGB03416.1| hypothetical protein AURANDRAFT_39351 [Aureococcus anophagefferens]
Length = 323
Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 13/177 (7%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQ 77
+E K+ + ++ Y I++ S +N+ + +F++ R ++ ++ +G+ M +
Sbjct: 5 RERKQEYFEKMEGLLDMYSKIFIVSCDNVGSKQFQQIRIALRGEAVVLMGKNTMMRKVVT 64
Query: 78 AYKVSKF----------LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELP 127
AY V + GN G TN +V L AR G+ A V +P
Sbjct: 65 AYLVKNPGHPYEMLLPKIMGNIGFVFTNGDLGKVRELIEDNRVPAPARVGAIAPIDVIVP 124
Query: 128 EGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
GP + + F + + ++ KG +E+ S + + G + A +L+ L I
Sbjct: 125 PGPTDCDPGQTN-FFQTLQIATKIVKGRIEITSPVNLLKAGDKVGNSEAVLLQKLHI 180
>gi|219128864|ref|XP_002184623.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404073|gb|EEC44022.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 273
Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Query: 87 GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQG 146
GN G TN E+ + AR GS A V +P+GP F +
Sbjct: 84 GNVGFVFTNGDLGEIREVLESNTRPAPARVGSVAPINVVVPKGP-TGCDPGQTAFFQTLQ 142
Query: 147 MPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
+ ++ +G +E+V+D + + G ++ A +L L I+ T+ L L
Sbjct: 143 IATKITRGQIEMVNDTALIQAGDRVTASQAALLLKLDIEPFTYGLVL 189
>gi|403360440|gb|EJY79897.1| Acidic ribosomal protein P0 [Oxytricha trifallax]
Length = 335
Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/114 (20%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ L GNTG+ +N +++ + + A+ G+ A + V + G +
Sbjct: 101 KIVTLLKGNTGIIFSNGDLSDIKKVLDDQSREAPAKVGAVAPDDVWIRAGS-TGLDPKQT 159
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
F ++ + ++ K +++V+D + G+ + A +L L I+ ++K+H+
Sbjct: 160 SFFQQLSISTKIVKTQIDIVADKKIITSGQKIEATHAALLDKLKIRPFSYKMHV 213
>gi|443690429|gb|ELT92567.1| hypothetical protein CAPTEDRAFT_167366, partial [Capitella teleta]
Length = 320
Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 37/196 (18%), Positives = 81/196 (41%), Gaps = 24/196 (12%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAY----------KVSK 83
++ Y ++ +N+ + + ++ R ++ ++ +G+ M K+
Sbjct: 21 IDEYPKCFLVGVDNVGSKQMQQIRIALRGHGVVLMGKNTMMRKAIRSHLENNPSLEKLLN 80
Query: 84 FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE-----GPLEQFTHEM 138
++ GN G T EV + + A+ G+ A V + GP E
Sbjct: 81 YIKGNVGFVFTKGDLTEVRKIIQENRVGAPAKAGALAPLSVMVTARNTGLGP------EK 134
Query: 139 EPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWS 198
F + +P ++ KG +E+++D + +EG+ + A +L +L K+ F L+ +
Sbjct: 135 TSFFQALAIPTKITKGTIEILNDVQLIKEGEKVGASEATLLTML--KIMPFSYGLVIQQV 192
Query: 199 AEDFELYREG-LDESD 213
+ ++ LD SD
Sbjct: 193 YDSGTVFHPSILDMSD 208
>gi|397582798|gb|EJK52423.1| hypothetical protein THAOC_28299 [Thalassiosira oceanica]
Length = 321
Score = 39.7 bits (91), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 76/177 (42%), Gaps = 13/177 (7%)
Query: 29 SIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRY------------S 76
+++ + NY +++ +N+ + + ++ R ++ + +G+ M S
Sbjct: 14 TMKGHMANYSKMFIVQVDNVGSKQIQQTRVALRGKAEILMGKNTMMRKCIREFVEENPGS 73
Query: 77 QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTH 136
++ GN G TN EV + AR G+ A V +P+GP
Sbjct: 74 PIEQLEACCRGNVGFVFTNGDLGEVREVIESNVRPAPARVGAVAPIDVIVPKGPTGCDPG 133
Query: 137 EMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHL 193
+ F + + ++ +G +E+ +D + G+ ++ A +L+ L I+ T+ ++L
Sbjct: 134 QT-AFFQTLQISTKITRGQIEMTNDTHLIAVGEKVTASQAALLQKLNIEPFTYGMNL 189
>gi|288559743|ref|YP_003423229.1| acidic ribosomal protein P0 RplPO [Methanobrevibacter ruminantium
M1]
gi|288542453|gb|ADC46337.1| acidic ribosomal protein P0 RplPO [Methanobrevibacter ruminantium
M1]
Length = 335
Score = 39.7 bits (91), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 39/212 (18%), Positives = 92/212 (43%), Gaps = 27/212 (12%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYS 76
VN ++ +++ + + + + N+ + +E R+ + + + + + +
Sbjct: 12 VNELKGIIDSAEVVGIVNLLNIPARQLQEMRKTLSGKATIRLSKINLMKLALEDCVNEKA 71
Query: 77 QAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG----PLE 132
++S ++ G L T+M + + + A+ G+ A E + +P G P
Sbjct: 72 NITELSDYMEGQPALVCTDMNPFRLYKILEDSKTSAPAKAGAIAPEDIVVPAGDTGFPPG 131
Query: 133 QFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLH 192
F + L++ G+P +++KG + + D V E G+P+ A L + IK +
Sbjct: 132 PFLGD----LQQIGVPAKIDKGKIVVQKDTTVVEAGEPVPKAVAAALTRMDIKPMEVGMD 187
Query: 193 LICRWSAEDFELYRE---GLDE----SDVESA 217
L + ED +++ +DE +D+++A
Sbjct: 188 LKAVY--EDGSIFKADVLAIDEEETFADIQNA 217
>gi|305663815|ref|YP_003860103.1| 50S ribosomal protein L10 [Ignisphaera aggregans DSM 17230]
gi|304378384|gb|ADM28223.1| ribosomal protein L10 [Ignisphaera aggregans DSM 17230]
Length = 361
Score = 39.7 bits (91), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 54/121 (44%)
Query: 73 MRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLE 132
M Y+ + S+FL G TN+ E++ L +K AR G ++ +P E
Sbjct: 92 MGYANVDEFSRFLTGPNVAIFTNLNPFEIKLLLDKISMPMRARPGDKIDREIVVPPMRTE 151
Query: 133 QFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLH 192
+ K +P+++ GV+ + + + G ++PE A + LG++ + K +
Sbjct: 152 LKPGPIMSLFGKLKIPIQVRDGVIWIAKEATIARPGDVVTPELASLFDKLGVEPSFIKAN 211
Query: 193 L 193
+
Sbjct: 212 V 212
>gi|45357822|ref|NP_987379.1| acidic ribosomal protein P0 [Methanococcus maripaludis S2]
gi|340623441|ref|YP_004741894.1| acidic ribosomal protein P0 [Methanococcus maripaludis X1]
gi|74555884|sp|Q6M0L1.1|RLA0_METMP RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|45047382|emb|CAF29815.1| LSU ribosomal protein L10E [Methanococcus maripaludis S2]
gi|339903709|gb|AEK19151.1| acidic ribosomal protein P0 [Methanococcus maripaludis X1]
Length = 335
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 14/93 (15%)
Query: 115 RTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPE 174
+ GST +P GP F E L+ G+P ++KG + + D +V +EG+ +S +
Sbjct: 130 KAGSTG-----MPPGP---FLSE----LKAVGIPAAIDKGKIGIKEDKIVVKEGEVVSQK 177
Query: 175 SARILRLLGIKMATFKLHLICRWSAEDFELYRE 207
A +L L IK T L+++ + ED +Y E
Sbjct: 178 LAVVLSALDIKPVTVGLNVLGVY--EDGVIYTE 208
>gi|341883769|gb|EGT39704.1| hypothetical protein CAEBREN_29720 [Caenorhabditis brenneri]
gi|341883794|gb|EGT39729.1| hypothetical protein CAEBREN_11107 [Caenorhabditis brenneri]
Length = 312
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 76/186 (40%), Gaps = 23/186 (12%)
Query: 35 ENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQAYKVSKF 84
E Y + +N+ + + +E R+ ++ + +G+ M + K+
Sbjct: 22 EEYPRCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKALRGHLGKNPSLEKLLPH 81
Query: 85 LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE-----GPLEQFTHEME 139
+ N G T E+ + + A+ G+ A V+LP GP E
Sbjct: 82 IVENVGFVFTKEDLGEIRAKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGP------EKT 135
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
F + +P ++ KG +E++++ + +EG + + +L +LG+ F L+ R
Sbjct: 136 SFFQALQIPTKIAKGTIEILNEVHLIKEGDKVGASESALLNMLGV--TPFSYGLVVRQVY 193
Query: 200 EDFELY 205
+D LY
Sbjct: 194 DDGTLY 199
>gi|323450214|gb|EGB06096.1| hypothetical protein AURANDRAFT_60208 [Aureococcus anophagefferens]
Length = 281
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 77/178 (43%), Gaps = 15/178 (8%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQ 77
+E K+ + +++Y I++ +N+ + +F++ R ++ ++ +G+ M +
Sbjct: 5 RERKQEYFEKMEGLLDDYSKIFIVHCDNVGSKQFQQIRIALRGKAVVLMGKNTMMRKVLN 64
Query: 78 AYK-----------VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVEL 126
AY + K L GN G TN +V L AR G+TA V +
Sbjct: 65 AYLAKNPGHPYEMLLPKVL-GNVGFVFTNEDLADVRELIEANRVPAPARVGATAPIDVIV 123
Query: 127 PEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
P GP + + F + + ++ KG +E+ + + +G + A +L+ L I
Sbjct: 124 PPGPTDCDPGQTN-FFQTLQIATKIVKGRIEITNPVNLLRKGDRVGNSEAVLLQKLHI 180
>gi|310771934|emb|CBH28904.1| 60S ACIDIC RIBOSOMAL PROTEIN P0 [Anncaliia algerae]
Length = 261
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 114 ARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSP 173
A+TGS A + + ++ F + +P ++NKG +E++SD V +G + P
Sbjct: 115 AKTGSYAQDDYIIKPXVTALGADKVSXF-QALNIPYKVNKGKLEILSDLKVLTKGTKVGP 173
Query: 174 ESARILRLLGIKMATFKLHL 193
A +L LLGI T+ + +
Sbjct: 174 AHATLLSLLGISPYTYYMKI 193
>gi|225434640|ref|XP_002279500.1| PREDICTED: 60S acidic ribosomal protein P0-1-like [Vitis vinifera]
Length = 286
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 7/136 (5%)
Query: 63 SRLLWV----GRYPMRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGS 118
S++L V G +R S+ K+ + GN GL T + V KY+ AR G
Sbjct: 26 SQILIVAGLRGSEKIRVSE--KMGRSYLGNVGLIFTKGDLKGVSDEVAKYKVGAPARAGV 83
Query: 119 TATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARI 178
A V + G + F + +P ++NKG VE+V + ++G + A +
Sbjct: 84 VAPIDVVIQPGS-TGLDPALTSFFQVLNIPTKINKGAVEIVVPVQLVKKGDKVGSSEAAL 142
Query: 179 LRLLGIKMATFKLHLI 194
L LG K ++ L ++
Sbjct: 143 LAKLGKKSFSYGLVVL 158
>gi|292656874|ref|YP_003536771.1| 50S ribosomal protein L10 [Haloferax volcanii DS2]
gi|448290875|ref|ZP_21482020.1| acidic ribosomal protein P0 [Haloferax volcanii DS2]
gi|347595691|sp|P41198.2|RLA0_HALVD RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|291370202|gb|ADE02429.1| ribosomal protein L10 [Haloferax volcanii DS2]
gi|445577928|gb|ELY32348.1| acidic ribosomal protein P0 [Haloferax volcanii DS2]
Length = 348
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 40/217 (18%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ------IKPSRLLWVGRYPMRYSQAYK 80
V+ + + +E+Y+S+ V + + + + R + ++ SR V R + ++
Sbjct: 20 VDELVDFIESYESVGVVGVAGIPSRQLQSMRRELHGSAAVRMSRNTLVNRALDEVNDGFE 79
Query: 81 -VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPEGPLEQ 133
+ +++ G L TN ++ F +++ + ++T G A + +PEG
Sbjct: 80 ELKEYIAGQVALIGTN------DNPFALFKELEASKTPAPINAGEVAPNDIVIPEG---D 130
Query: 134 FTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
+ PF L++ G R+ G + + D V EG+ +S E A +L LGI+
Sbjct: 131 TGVDPGPFVGELQQVGASARIMDGSIMVTEDSNVLSEGEEVSEELANVLAELGIEPKEVG 190
Query: 191 LHLICRWS----------AEDFELYREGLDESDVESA 217
L L +S A D + YR +D++SA
Sbjct: 191 LDLRGVFSEGVLFEPDELAIDVDEYR-----ADIQSA 222
>gi|313018|emb|CAA41724.1| ribosomal protein L10e [Haloferax volcanii]
Length = 350
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 40/217 (18%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQ------IKPSRLLWVGRYPMRYSQAYK 80
V+ + + +E+Y+S+ V + + + + R + ++ SR V R + ++
Sbjct: 20 VDELVDFIESYESVGVVGVAGIPSRQLQSMRRELHGSAAVRMSRNTLVNRALDEVNDGFE 79
Query: 81 -VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPEGPLEQ 133
+ +++ G L TN ++ F +++ + ++T G A + +PEG
Sbjct: 80 ELKEYIAGQVALIGTN------DNPFALFKELEASKTPAPINAGEVAPNDIVIPEG---D 130
Query: 134 FTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
+ PF L++ G R+ G + + D V EG+ +S E A +L LGI+
Sbjct: 131 TGVDPGPFVGELQQVGASARIMDGSIMVTEDSNVLSEGEEVSEELANVLAELGIEPKEVG 190
Query: 191 LHLICRWS----------AEDFELYREGLDESDVESA 217
L L +S A D + YR +D++SA
Sbjct: 191 LDLRGVFSEGVLFEPDELAIDVDEYR-----ADIQSA 222
>gi|115474653|ref|NP_001060923.1| Os08g0130500 [Oryza sativa Japonica Group]
gi|730580|sp|P41095.3|RLA0_ORYSJ RecName: Full=60S acidic ribosomal protein P0
gi|315113295|pdb|3IZR|SS Chain s, Localization Of The Large Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
gi|455401|dbj|BAA04668.1| acidic ribosomal protein P0 [Oryza sativa Japonica Group]
gi|29467534|dbj|BAC66723.1| 60S acidic ribosomal protein P0 [Oryza sativa Japonica Group]
gi|113622892|dbj|BAF22837.1| Os08g0130500 [Oryza sativa Japonica Group]
gi|215694045|dbj|BAG89244.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 319
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 74/171 (43%), Gaps = 15/171 (8%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKVSK---------- 83
++ Y + + +N+ + + +E R+ ++ ++ +G+ + + KV
Sbjct: 22 LDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTL-IRRCIKVHADNTGNKEFLE 80
Query: 84 ---FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP 140
L GN GL T +EV KY+ AR G A V +P G
Sbjct: 81 LMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGN-TGLDPSQTS 139
Query: 141 FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
F + +P ++NKG VE+++ + ++G + + +L LGI+ ++ L
Sbjct: 140 FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGL 190
>gi|7674331|sp|Q9Y8J3.1|RLA0_METVO RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|4894939|gb|AAD32665.1|AF139164_2 ribosomal protein L10 [Methanococcus voltae]
Length = 297
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 85/195 (43%), Gaps = 22/195 (11%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKVSK--- 83
VNS++ +++ I + + +++ +E R+ I+ S L + R + +V++
Sbjct: 18 VNSLKELLKSGNVIALIDMMEVPSVQLQEIRDTIRDSMTLKMSRNTLMKRAIEEVAEETG 77
Query: 84 -------FLCGNTG--LFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEG----P 130
C G L T M ++ N+ + + G+TA +E+ G P
Sbjct: 78 NPSFTKLIDCMEKGAALIATEMNPFKLYKTLNESKSPAPIKAGATAPCDIEIKAGSTGMP 137
Query: 131 LEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
F E L+ G+P + KG + + D +V +EG +S + A +L L IK
Sbjct: 138 PGPFLSE----LKAVGLPAAIEKGKIGIKEDTIVAKEGDVVSAKLAVVLSKLDIKPMEVG 193
Query: 191 LHLICRWSAEDFELY 205
L+++ + ED +Y
Sbjct: 194 LNVLGVY--EDGIVY 206
>gi|77552928|gb|ABA95724.1| 60S acidic ribosomal protein P0, putative, expressed [Oryza sativa
Japonica Group]
gi|125578417|gb|EAZ19563.1| hypothetical protein OsJ_35136 [Oryza sativa Japonica Group]
Length = 320
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 74/171 (43%), Gaps = 15/171 (8%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKVSK---------- 83
++ Y + + +N+ + + +E R+ ++ ++ +G+ + + KV
Sbjct: 22 LDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTL-IRRCIKVHADNTGNKDFLE 80
Query: 84 ---FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP 140
L GN GL T +EV KY+ AR G A V +P G
Sbjct: 81 LMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGN-TGLDPSQTS 139
Query: 141 FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
F + +P ++NKG VE+++ + ++G + + +L LGI+ ++ L
Sbjct: 140 FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGL 190
>gi|77548531|gb|ABA91328.1| 60S acidic ribosomal protein P0, putative, expressed [Oryza sativa
Japonica Group]
gi|125533290|gb|EAY79838.1| hypothetical protein OsI_34997 [Oryza sativa Indica Group]
gi|125602086|gb|EAZ41411.1| hypothetical protein OsJ_25933 [Oryza sativa Japonica Group]
Length = 320
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 74/171 (43%), Gaps = 15/171 (8%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKVSK---------- 83
++ Y + + +N+ + + +E R+ ++ ++ +G+ + + KV
Sbjct: 22 LDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTL-IRRCIKVHADNTGNKDFLE 80
Query: 84 ---FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP 140
L GN GL T +EV KY+ AR G A V +P G
Sbjct: 81 LMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGN-TGLDPSQTS 139
Query: 141 FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
F + +P ++NKG VE+++ + ++G + + +L LGI+ ++ L
Sbjct: 140 FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGL 190
>gi|125535694|gb|EAY82182.1| hypothetical protein OsI_37384 [Oryza sativa Indica Group]
gi|346703724|emb|CBX24392.1| hypothetical_protein [Oryza glaberrima]
Length = 320
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 74/171 (43%), Gaps = 15/171 (8%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKVSK---------- 83
++ Y + + +N+ + + +E R+ ++ ++ +G+ + + KV
Sbjct: 22 LDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTL-IRRCIKVHADNTGNKDFLE 80
Query: 84 ---FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP 140
L GN GL T +EV KY+ AR G A V +P G
Sbjct: 81 LMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGN-TGLDPSQTS 139
Query: 141 FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
F + +P ++NKG VE+++ + ++G + + +L LGI+ ++ L
Sbjct: 140 FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGL 190
>gi|397779353|ref|YP_006543826.1| Acidic ribosomal protein P0 [Methanoculleus bourgensis MS2]
gi|396937855|emb|CCJ35110.1| Acidic ribosomal protein P0 homolog AltName: Full=L10E
[Methanoculleus bourgensis MS2]
Length = 341
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 72/166 (43%), Gaps = 7/166 (4%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-------RYSQAY 79
V I+ ++E + + V + + ++ R ++ + + + R +
Sbjct: 16 VAEIKRSIEEHTLVGVVDMYGIPASQVQQIRRSLRGTARVKMARNTLIEHALSDLGGSVA 75
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
+++ G + L TN ++ L K + A+ G TA E + +P+GP +
Sbjct: 76 ALNEHATGQSALIFTNENPFKLFKLLEKTKTKMAAKPGETAPEDIVVPKGPTSFKPGPIV 135
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
L++ G+P + G V++ V +EG+ +S + A L LGIK
Sbjct: 136 GELQQVGIPAAIEGGKVKIREAKTVVKEGETISKKVADALVKLGIK 181
>gi|66807939|ref|XP_637692.1| ribosomal acidic phosphoprotein P0 [Dictyostelium discoideum AX4]
gi|166208566|sp|P22685.2|RLA0_DICDI RecName: Full=60S acidic ribosomal protein P0
gi|60466112|gb|EAL64177.1| ribosomal acidic phosphoprotein P0 [Dictyostelium discoideum AX4]
Length = 305
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 78/187 (41%), Gaps = 19/187 (10%)
Query: 19 GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----- 73
G + K V + Y + V + + + + ++ R+ I+ + +G+ M
Sbjct: 5 GSKRKNVFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVI 64
Query: 74 -----RYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE 128
+ ++ +L NT + EV+ + N A+ G A V +P
Sbjct: 65 RDLADSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPA 124
Query: 129 GPLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
GP MEP FL+ + ++N+G +++V++ + + G+ + A +L+ L I
Sbjct: 125 GP-----TGMEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQKLNI 179
Query: 185 KMATFKL 191
K T+ L
Sbjct: 180 KPFTYGL 186
>gi|449668830|ref|XP_002154455.2| PREDICTED: 60S acidic ribosomal protein P0-like [Hydra
magnipapillata]
Length = 316
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
K+ +L GN G T EV L + A+ GS A V +P G E
Sbjct: 77 KILPYLVGNIGFIFTKEDLTEVRDLVLSNKKNAPAKAGSIAPLDVFIPAGN-TGMGPEKT 135
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
F + + ++ KG +E++SD + ++ + A +L +L I+
Sbjct: 136 SFFQALSIQTKITKGTIEILSDIHLIKKDVKVGASEAALLAMLNIQ 181
>gi|269860044|ref|XP_002649745.1| LSU ribosomal protein L10P [Enterocytozoon bieneusi H348]
gi|220066804|gb|EED44275.1| LSU ribosomal protein L10P [Enterocytozoon bieneusi H348]
Length = 259
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Query: 113 FARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLS 172
FA+ G A E V +PEGP +++ F + ++ KG +E+ + G+ +
Sbjct: 110 FAKFGDKALEDVIVPEGPTGLGPDQIQLF-HAAKINTKIVKGKIEIAVSHKLISAGEVVG 168
Query: 173 PESARILRLLGIKMATFKLHLICRWSAED 201
A IL LGIK F L ++ + D
Sbjct: 169 ISEANILAKLGIKPFNFGLDILKIFEGND 197
>gi|315229959|ref|YP_004070395.1| LSU ribosomal protein P0 (L10p) [Thermococcus barophilus MP]
gi|315182987|gb|ADT83172.1| LSU ribosomal protein P0 (L10p) [Thermococcus barophilus MP]
Length = 339
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAED 201
++ G+P R+ +G V + D VV + G+ ++P+ A IL LGI+ L+L+ + ED
Sbjct: 139 MQALGIPARIERGKVTIQKDTVVLKAGEIITPQLANILNKLGIEPLEVGLNLLAAY--ED 196
Query: 202 FELY 205
+Y
Sbjct: 197 GIIY 200
>gi|7337|emb|CAA39657.1| ribosomal acidic phosphoprotein P0 [Dictyostelium discoideum]
Length = 305
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 9/115 (7%)
Query: 81 VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP 140
++ +L NT + EV+ + N A+ G A V +P GP MEP
Sbjct: 77 LNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPAGP-----TGMEP 131
Query: 141 ----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
FL+ + ++N+G +++V++ + + G+ + A +L+ L IK T+ L
Sbjct: 132 TQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPFTYGL 186
>gi|300521630|gb|ADK26026.1| r-protein L10p [Candidatus Nitrososphaera gargensis]
Length = 294
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%)
Query: 81 VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP 140
+SK L G L TN+ ++ +F + + + A+ G AT++V +P G +
Sbjct: 82 LSKQLEGQCALMFTNISPFKLNLIFAQNKVFLPAKGGDIATKEVVVPAGNTGIAPGPVLS 141
Query: 141 FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
+ +P ++++G + + D VV + G +S + A +L L +K
Sbjct: 142 EFKVANVPTKIDQGTIWVSKDTVVAKPGDVISMQLASLLSKLNVK 186
>gi|408402711|ref|YP_006860694.1| acidic ribosomal protein P0 [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|408363307|gb|AFU57037.1| acidic ribosomal protein P0 [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 298
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%)
Query: 81 VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP 140
+SK L G L TN+ ++ +F + + + A+ G AT++V +P G +
Sbjct: 86 LSKQLEGQCALMFTNISPFKLNLIFAQNKVFLPAKGGDIATKEVVVPAGNTGIAPGPVLS 145
Query: 141 FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
+ +P ++++G + + D VV + G +S + A +L L +K
Sbjct: 146 EFKVANVPTKIDQGTIWVSKDTVVAKPGDVISMQLASLLSKLNVK 190
>gi|20093065|ref|NP_619140.1| acidic ribosomal protein P0 [Methanosarcina acetivorans C2A]
gi|22257020|sp|Q8TI80.1|RLA0_METAC RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|19918389|gb|AAM07620.1| acidic ribosomal protein P0-like protein [Methanosarcina
acetivorans C2A]
Length = 347
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 82/196 (41%), Gaps = 12/196 (6%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKVSKFLC 86
+ +I+ ++++K + E + K ++ R +K +L V R + ++ + +
Sbjct: 19 IENIKELIQSHKVFGMVGIEGILATKMQKIRRDLKDVAVLKVSRNTLTERALNQLGETIP 78
Query: 87 G-------NTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
G T L TN ++ L + + R G+ A + + +GP +
Sbjct: 79 GMKEYLDKQTALIFTNESPFKLYKLLEQTKTPSPIRGGAIAPADITVQKGPTSFPPGPIL 138
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
L+ G+P ++ G V + VVC+ G+ + + A +L L I L L R +
Sbjct: 139 GELQSAGIPASIDAGKVAVKETKVVCKAGEVVPQKLATMLSKLEIYPLIVGLDL--RAAY 196
Query: 200 EDFELYRE---GLDES 212
+D +Y +DES
Sbjct: 197 DDGTIYEPELLAVDES 212
>gi|303389937|ref|XP_003073200.1| 60S acidic ribosomal protein P0 [Encephalitozoon intestinalis ATCC
50506]
gi|303302345|gb|ADM11840.1| 60S acidic ribosomal protein P0 [Encephalitozoon intestinalis ATCC
50506]
Length = 266
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 114 ARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSP 173
A+ G+ A + V + E + T + + + G+ ++ KG VE++S + V G + P
Sbjct: 109 AKVGNIAQKDVWV-ENCITGMTPDKTSYFQVLGIATKITKGKVEIISPYKVLSVGDKVGP 167
Query: 174 ESARILRLLGIKMATFKLHLICRWSAEDFELYREGL 209
A +L +L IK ++K ++ ED +Y L
Sbjct: 168 SQANLLGMLNIKPFSYK--MVMHQVYEDGVIYDSSL 201
>gi|290986534|ref|XP_002675979.1| predicted protein [Naegleria gruberi]
gi|284089578|gb|EFC43235.1| predicted protein [Naegleria gruberi]
Length = 299
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 14/111 (12%)
Query: 80 KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDF---ARTGSTATEKVELPEGPLEQFTH 136
K+ ++L GN GL TN E+E L + + + F A+ G + + + G FT
Sbjct: 87 KICEYLNGNVGLIFTN--SSEIEELIEQIQSFKFETRAKIGERSPRNIYIRSG----FTA 140
Query: 137 E-----MEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLL 182
+ P ++ G+ R G VE D ++ EG+ + A +L +L
Sbjct: 141 TIPVPILAPMFQQLGVVFRTIVGQVESCRDCLILSEGEKIGKMQADLLEML 191
>gi|257076139|ref|ZP_05570500.1| acidic ribosomal protein P0 [Ferroplasma acidarmanus fer1]
Length = 318
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 74/187 (39%), Gaps = 22/187 (11%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKVSK--- 83
VN++ + V S + +RN +F++ R I+ + V R + K +K
Sbjct: 12 VNALTEELNESPVSAVISIKGLRNKEFQKIRSDIRGKVKIEVLRARLLRLALQKSNKKNI 71
Query: 84 -----FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTAT-------EKVELPEGPL 131
G L T+ + V + AR G A ++ P GP
Sbjct: 72 AGMTEHATGQIALITTSETPKTVYDMLVSKRTKAAARGGEIAEEDIIIEPKETSFPPGP- 130
Query: 132 EQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
M +K G+P + KG + + S+ + ++G+ +S E A++L L I T L
Sbjct: 131 ------MISVFQKAGIPAGIEKGKIVIKSEVTLVKKGEVISKEKAQVLEKLEILPVTVGL 184
Query: 192 HLICRWS 198
+I +S
Sbjct: 185 EMIAAYS 191
>gi|282164746|ref|YP_003357131.1| acidic ribosomal protein P0 homolog [Methanocella paludicola SANAE]
gi|282157060|dbj|BAI62148.1| acidic ribosomal protein P0 homolog [Methanocella paludicola SANAE]
Length = 303
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 76/169 (44%), Gaps = 12/169 (7%)
Query: 28 NSIRNAVENYKSIYVFSFENMRNL---KFKEFREQIKPSRLLWVGRYPMRY--------- 75
+ I+ V+N S V ++R + ++ R++++ + + + R +
Sbjct: 18 DEIKEIVDNVHSHKVTGIVDVRGVPADALQQMRQKLRGTVAMKMIRNTLTTIAFDSLPED 77
Query: 76 SQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFT 135
+A +++K++ G L TN ++ L + A++G TA V + +GP
Sbjct: 78 DKARELAKYVDGQIVLVYTNSNPFKLYKLLEGTKTKAPAKSGDTAPADVAVSKGPTSFKP 137
Query: 136 HEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
+ +++ G+P + G V + SD VV ++G + + A IL L I
Sbjct: 138 GPIVGEMQQAGIPAGIEGGKVVIKSDKVVVKKGDKFTAKQAEILGRLEI 186
>gi|239799219|dbj|BAH70542.1| ACYPI000079 [Acyrthosiphon pisum]
Length = 167
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/152 (19%), Positives = 65/152 (42%), Gaps = 21/152 (13%)
Query: 32 NAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM----------RYSQAYKV 81
N ++ + ++ +N+ + + ++ R ++ + ++ +G+ M R K+
Sbjct: 19 NLLDEFPKCFIVGADNVGSKQMQQIRISLRGNAVVLMGKNTMMRKAIKGHIDRNQSLEKI 78
Query: 82 SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE-----GPLEQFTH 136
+ GN G T E+ + + AR G+ A V +P GP
Sbjct: 79 MPHIRGNVGFVFTRSDLVEIRDKLLENKVRAPARPGAIAPCPVVIPAQNTGLGP------ 132
Query: 137 EMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 168
E F + +P +++KG +E+++D + +EG
Sbjct: 133 EKTSFFQALSIPTKISKGTIEIINDVHILKEG 164
>gi|448484158|ref|ZP_21605943.1| acidic ribosomal protein P0 [Halorubrum arcis JCM 13916]
gi|445820331|gb|EMA70157.1| acidic ribosomal protein P0 [Halorubrum arcis JCM 13916]
Length = 348
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 25/181 (13%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKV-------SKFLC 86
+++Y+S+ + + + + + R ++ S + + R + +V ++++
Sbjct: 25 IDSYQSVGIVGVAGIPSRQLQAMRRELHGSAAVRMSRNTLTNRALEEVDDGVEALTEYVS 84
Query: 87 GNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPEGPLEQFTHEMEP 140
G L TN ++ F ++ + ++T G A + +PEG + P
Sbjct: 85 GQVALVGTN------DNPFGLFKQLEASKTPAPINAGEVAPNDIVIPEG---DTGVDPGP 135
Query: 141 F---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
F L+ G R+ G +++ D V EEG+ + + A +L LGI+ L L +
Sbjct: 136 FVGELQTVGASARIMDGSIKVTEDSTVLEEGEVVDDDLANVLVELGIEPKEVGLDLRAVY 195
Query: 198 S 198
S
Sbjct: 196 S 196
>gi|448463142|ref|ZP_21597920.1| acidic ribosomal protein P0 [Halorubrum kocurii JCM 14978]
gi|445817137|gb|EMA67013.1| acidic ribosomal protein P0 [Halorubrum kocurii JCM 14978]
Length = 346
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 79/188 (42%), Gaps = 25/188 (13%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKV----- 81
V+ + + +E++ S+ + + + + + R ++ S + + R + +V
Sbjct: 18 VDELVDFIESFNSVGIVGVAGIPSRQLQAMRRELHGSADVRMSRNTLTVRALEEVNDGVE 77
Query: 82 --SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPEGPLEQ 133
++++ G L TN ++ F ++ + ++T G A V +PEG
Sbjct: 78 ELTQYVAGQVALIGTN------DNPFGLFKQLEASKTPAPINAGEVAPNDVVIPEG---D 128
Query: 134 FTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
+ PF L+ G R+ G + + D V EEG+ + + A +L LGI+
Sbjct: 129 TGVDPGPFVGELQTVGAAARIQDGSIMVTEDSKVLEEGEVVDDDLANVLTELGIEPKEVG 188
Query: 191 LHLICRWS 198
L L +S
Sbjct: 189 LDLKGVYS 196
>gi|448441581|ref|ZP_21589188.1| acidic ribosomal protein P0 [Halorubrum saccharovorum DSM 1137]
gi|445688617|gb|ELZ40868.1| acidic ribosomal protein P0 [Halorubrum saccharovorum DSM 1137]
Length = 345
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 79/188 (42%), Gaps = 25/188 (13%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKV----- 81
V+ + + +E++ S+ + + + + + R ++ S + + R + +V
Sbjct: 18 VDELVDFIESFNSVGIVGVAGIPSRQLQAMRRELHGSADVRMSRNTLTVRALEEVNDGVE 77
Query: 82 --SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPEGPLEQ 133
++++ G L TN ++ F ++ + ++T G A V +PEG
Sbjct: 78 ELTQYVAGQVALIGTN------DNPFGLFKQLEASKTPAPINAGEVAPNDVVIPEG---D 128
Query: 134 FTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
+ PF L+ G R+ G + + D V EEG+ + + A +L LGI+
Sbjct: 129 TGVDPGPFVGELQTVGAAARIQDGSIMVTEDSKVLEEGEVVDDDLANVLTELGIEPKEVG 188
Query: 191 LHLICRWS 198
L L +S
Sbjct: 189 LDLKGVYS 196
>gi|297745924|emb|CBI15980.3| unnamed protein product [Vitis vinifera]
Length = 245
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Query: 87 GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQG 146
GN GL T + V KY+ AR G A V + G + F +
Sbjct: 11 GNVGLIFTKGDLKGVSDEVAKYKVGAPARAGVVAPIDVVIQPGS-TGLDPALTSFFQVLN 69
Query: 147 MPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
+P ++NKG VE+V + ++G + A +L LG K ++ L ++
Sbjct: 70 IPTKINKGAVEIVVPVQLVKKGDKVGSSEAALLAKLGKKSFSYGLVVL 117
>gi|294461217|gb|ADE76171.1| unknown [Picea sitchensis]
Length = 266
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 84 FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLR 143
L GN GL T +EV KY+ AR G A V +P G F +
Sbjct: 29 LLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGN-TGLDPSQTSFFQ 87
Query: 144 KQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
+P ++NKG VE+++ + ++G+ + A +L LGI+ ++ L
Sbjct: 88 VLNIPTKINKGTVEIITPVELIKKGEKVGSSEAALLAKLGIRPFSYGL 135
>gi|448426605|ref|ZP_21583454.1| acidic ribosomal protein P0 [Halorubrum terrestre JCM 10247]
gi|445679485|gb|ELZ31952.1| acidic ribosomal protein P0 [Halorubrum terrestre JCM 10247]
Length = 348
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 25/181 (13%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKV-------SKFLC 86
+++Y+S+ + + + + + R ++ S + + R + +V ++++
Sbjct: 25 IDSYQSVGIVGVAGIPSRQLQAMRRELHGSAAVRMSRNTLTNRALEEVDDGVEALTEYVS 84
Query: 87 GNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPEGPLEQFTHEMEP 140
G L TN ++ F ++ + ++T G A + +PEG + P
Sbjct: 85 GQVALVGTN------DNPFGLFKQLEASKTPAPINAGEVAPNDIVIPEG---DTGVDPGP 135
Query: 141 F---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 197
F L+ G R+ G +++ D V EEG+ + + A +L LGI+ L L +
Sbjct: 136 FVGELQTVGASARIMDGSIKVTEDSTVLEEGEVVDDDLANVLVELGIEPKEVGLDLRAVY 195
Query: 198 S 198
S
Sbjct: 196 S 196
>gi|222480940|ref|YP_002567177.1| acidic ribosomal protein P0 [Halorubrum lacusprofundi ATCC 49239]
gi|222453842|gb|ACM58107.1| ribosomal protein L10 [Halorubrum lacusprofundi ATCC 49239]
Length = 345
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 79/188 (42%), Gaps = 25/188 (13%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYKV----- 81
V+ + + +E++ S+ + + + + + R ++ S + + R + +V
Sbjct: 18 VDELVDFIESFNSVGIVGVAGIPSRQLQAMRRELHGSADVRMSRNTLTVRALEEVNDGVE 77
Query: 82 --SKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPEGPLEQ 133
++++ G L TN ++ F ++ + ++T G A V +PEG
Sbjct: 78 ELTQYVAGQVALIGTN------DNPFGLFKQLEASKTPAPINAGEVAPNDVVIPEG---D 128
Query: 134 FTHEMEPF---LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFK 190
+ PF L+ G R+ G + + D V EEG+ + + A +L LGI+
Sbjct: 129 TGVDPGPFVGELQTVGAAARIQDGSIMVTEDSKVLEEGEVVDDDLANVLTELGIEPKEVG 188
Query: 191 LHLICRWS 198
L L +S
Sbjct: 189 LDLKGVYS 196
>gi|14579678|gb|AAK69358.1|AF390866_1 ribosomal phosphoprotein P0 [Toxoplasma gondii]
Length = 314
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 87/195 (44%), Gaps = 22/195 (11%)
Query: 34 VENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM-------RYSQAYKVSKFLC 86
+E Y + V +++ + + + R ++ ++ +G+ M + S+ ++ K L
Sbjct: 22 LEKYPRVLVVEADHVGSKQMADIRLALRGKAVVLMGKNTMIRTALKQKMSEMPQLEKLLP 81
Query: 87 G---NTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP--- 140
N G EV + + + AR G A V +P GP M+P
Sbjct: 82 LVRLNVGFIFCIEDPAEVRRIVAENKVPAPARQGVFAPIDVFIPAGP-----TGMDPGST 136
Query: 141 -FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
F + G+ ++ KG++E+ ++ + +EG ++ +A +L+ L IK F+ L +
Sbjct: 137 SFFQALGIATKIVKGIIEIQNEVHLIKEGDKVTASAATLLQKLNIK--PFEYGLAIQHVY 194
Query: 200 EDFELYREG-LDESD 213
+D +Y+ LD +D
Sbjct: 195 DDGSVYKASVLDITD 209
>gi|284162830|ref|YP_003401453.1| 50S ribosomal protein L10 [Archaeoglobus profundus DSM 5631]
gi|284012827|gb|ADB58780.1| ribosomal protein L10 [Archaeoglobus profundus DSM 5631]
Length = 336
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 9/196 (4%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM------RYSQAYK 80
V +R +++ + + SF + + + + R +++ L+ V + + YK
Sbjct: 16 VEELRKMFKSHPVVAIVSFRGVPSNQMQRIRRELRGKALIKVVKNTLVEKALEELEDNYK 75
Query: 81 -VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEME 139
+ +FL T L T+M ++ L + ++ + + V + +GP M
Sbjct: 76 KLEEFLYDQTALVFTDMNPFKLYKLLEETKEPSPLKPNQISPVDVVVEKGPTPIPPGPMM 135
Query: 140 PFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSA 199
L+ G+PV + +G V + V + G+ + PE AR L +LGIK K+ L R
Sbjct: 136 AELQNAGIPVAIERGKVVVRETVTVVKAGEVVKPEVARALSVLGIK--PIKIGLDTRVIY 193
Query: 200 EDFELYREGLDESDVE 215
++ L + DVE
Sbjct: 194 DNGILLTPDILAIDVE 209
>gi|374636064|ref|ZP_09707648.1| ribosomal protein L10 [Methanotorris formicicus Mc-S-70]
gi|373560322|gb|EHP86589.1| ribosomal protein L10 [Methanotorris formicicus Mc-S-70]
Length = 340
Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 91/201 (45%), Gaps = 34/201 (16%)
Query: 27 VNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQAY----- 79
VN+++ +++ + + + + +E R++I+ +L + R + R Q
Sbjct: 19 VNTLKELLKSKPIVAIIDMMEVPARQLQEIRDKIRGKMILRMSRNSLIIRAIQELSEETN 78
Query: 80 -----KVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFART------GSTATEKVELPE 128
K++ ++ + +T+M + F Y++ + ++T G+ A +++ +
Sbjct: 79 NPEFAKLTDYVEKGAAILVTDM------NPFKLYKELEASKTPAPIKGGAIAPCDIKVQK 132
Query: 129 G----PLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGI 184
G P F E L+ G+P + KG + + D VV + G+ +S + A +L LGI
Sbjct: 133 GSTGMPPGPFLGE----LKSVGIPAAIEKGKIAIKEDKVVVKAGEVVSHKLATVLSALGI 188
Query: 185 KMATFKLHLICRWSAEDFELY 205
K L+L+ + ED +Y
Sbjct: 189 KPIKVGLNLLAAY--EDGIIY 207
>gi|62902645|gb|AAY19282.1| acidic ribosomal P0 protein [Euplotes vannus]
Length = 232
Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 87 GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQG 146
GN G+ TN +++ + ++ A+ G+ A V + GP + F +
Sbjct: 2 GNLGIIFTNHDLTDIKDIVERHAREAPAKIGAVAQCDVWIRAGP-TGLDPKQTLFFQNLQ 60
Query: 147 MPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
+P ++ K +E+ SD + EG + A +L+ L I ++KL
Sbjct: 61 IPTKIAKTQIEITSDKQIIFEGDKVGSNEAALLQKLNINPFSYKL 105
>gi|126651791|ref|ZP_01723993.1| hypothetical protein BB14905_15305 [Bacillus sp. B14905]
gi|126591469|gb|EAZ85576.1| hypothetical protein BB14905_15305 [Bacillus sp. B14905]
Length = 284
Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 88 NTGLFLTNMPKEEVESLFNKYEDYDFART--GSTATEKVELPEGPLEQFTHEMEPFLRKQ 145
N LF N+ ++ L++ +E YD + T G+TA+E L G + FTH M LR +
Sbjct: 139 NPVLFSLNL----MQYLYSSFE-YDPSATDVGTTASEAFALKRGVCQDFTHVMLGVLRSK 193
Query: 146 GMPVRLNKG 154
G+P R G
Sbjct: 194 GIPARYVSG 202
>gi|326578109|gb|ADZ95698.1| 60S ribosomal protein P0 [Nosema bombycis]
Length = 139
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 35/68 (51%)
Query: 135 THEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
T + + + G+P + KG +E++ DF V G + P +L L+ +K +K++++
Sbjct: 2 TSDYTGYFQTLGIPTIITKGKIEIMQDFKVLSPGDKVGPSQVNLLALINMKPFRYKMNIL 61
Query: 195 CRWSAEDF 202
+ +F
Sbjct: 62 NIYEEGEF 69
>gi|213032425|emb|CAS05791.1| 60S acidic ribosomal protein P0 [Blaptica dubia]
Length = 218
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 11/110 (10%)
Query: 87 GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE-----GPLEQFTHEMEPF 141
GN G T EV + + AR G+ A V +P GP E F
Sbjct: 30 GNVGFVFTRGDLVEVRDKLLENKVRAPARNGAIAPCPVIIPAQNTGLGP------EKTSF 83
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
+ +P +++KG +E+++D + +EG + A +L +L I ++ L
Sbjct: 84 FQALSIPTKISKGTIEIINDVHILKEGDKVGASDATLLNMLNISPFSYGL 133
>gi|323448330|gb|EGB04230.1| hypothetical protein AURANDRAFT_32917 [Aureococcus anophagefferens]
Length = 156
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 65/153 (42%), Gaps = 13/153 (8%)
Query: 20 KEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPM--RYSQ 77
+E K+ + ++ Y I++ S +N+ + +F++ R ++ ++ +G+ M +
Sbjct: 5 RERKQEYFEKMEGLLDMYSKIFIVSCDNVGSKQFQQIRIALRGEAVVLMGKNTMMRKVVT 64
Query: 78 AYKVSKF----------LCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELP 127
AY V + GN G TN +V L AR G+ A V +P
Sbjct: 65 AYLVKNPGHPYEMLLPKIMGNIGFVFTNGDLGKVRELIEDNRVPAPARVGAIAPIDVIVP 124
Query: 128 EGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVS 160
GP + + F + + ++ KG +E+ S
Sbjct: 125 PGPTDCDPGQTN-FFQTLQIATKIVKGRIEITS 156
>gi|403049506|ref|ZP_10903990.1| prolyl-tRNA ligase [SAR86 cluster bacterium SAR86D]
Length = 265
Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 19 GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGR-YPMRYSQ 77
G H+EVI + IRN V++YK + + N+ ++ K FR++++P + GR + M+ S
Sbjct: 107 GPTHEEVITDLIRNNVKSYKELPL----NIYQIQTK-FRDEVRPRYGVMRGREFLMKDSY 161
Query: 78 AYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE--DYDFARTGSTATEK 123
++ + + T L + N K+ +E + +Y+ D G A+E+
Sbjct: 162 SFNIDEACLEETYLAMRNTYKKVLERMGLEYKIVSADSGAIGGDASEE 209
>gi|390938924|ref|YP_006402662.1| 50S ribosomal protein L10 [Desulfurococcus fermentans DSM 16532]
gi|390192031|gb|AFL67087.1| LSU ribosomal protein L10P [Desulfurococcus fermentans DSM 16532]
Length = 335
Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%)
Query: 84 FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLR 143
+L G + TNM E+ L + + + + G ++ +PEG M
Sbjct: 83 YLTGQILVVFTNMNAFELAMLMDSHVTKSYFKPGEKTDREIIIPEGNTGIPPGPMLSVFG 142
Query: 144 KQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
+ +P ++ VV + D VV + G +S + A +L+ LG+ + +L
Sbjct: 143 RLKIPTKVQGNVVYVAKDTVVAKPGDVVSGDLASLLQKLGLALKEIRL 190
>gi|401826303|ref|XP_003887245.1| ribosomal protein L10-like protein [Encephalitozoon hellem ATCC
50504]
gi|392998404|gb|AFM98264.1| ribosomal protein L10-like protein [Encephalitozoon hellem ATCC
50504]
Length = 186
Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 13/168 (7%)
Query: 17 KKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKP-SRLLWVGRYPMRY 75
KK KE + + ++ + Y + V ++ N+ K+ RE + S++L+V R M
Sbjct: 6 KKSKEKRHAEMEKVKKYADKYPLVAVVENPSIPNVILKKIREDFEGISKILFV-RKKMA- 63
Query: 76 SQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFT 135
S Y + + L N EE YE DF + + + ++ +
Sbjct: 64 SALYNMPSMPKDSFFLMFGN---EEAIEKAKSYEYEDFLEENDVCPSRAVIEKQVVK--S 118
Query: 136 HEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLG 183
EM L PV + ++L D+VVCE G+ + + ARILR G
Sbjct: 119 KEMIEIL-----PVSMKDEKMQLTEDYVVCEAGETVDEKKARILRFFG 161
>gi|218884413|ref|YP_002428795.1| acidic ribosomal protein P0 [Desulfurococcus kamchatkensis 1221n]
gi|218766029|gb|ACL11428.1| Acidic ribosomal protein P0 - like protein [Desulfurococcus
kamchatkensis 1221n]
Length = 333
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 84 FLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLR 143
+L G + TNM E+ L + + + + G ++ +PEG M
Sbjct: 80 YLTGQILVVFTNMNAFELAMLMDTHITKSYFKPGEKTDREIIIPEGNTGIPPGPMLSVFG 139
Query: 144 KQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKL 191
+ +P ++ VV + D VV + G+ +S + A +L+ LG+ + +L
Sbjct: 140 RLKIPTKVQGNVVYVAKDTVVAKPGEVVSGDLASLLQKLGLALKEIRL 187
>gi|424812664|ref|ZP_18237904.1| ribosomal protein L10 [Candidatus Nanosalinarum sp. J07AB56]
gi|339756886|gb|EGQ40469.1| ribosomal protein L10 [Candidatus Nanosalinarum sp. J07AB56]
Length = 291
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 82/193 (42%), Gaps = 8/193 (4%)
Query: 14 KTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIK---PSRLLWVGR 70
K K+ + KE IV + +E++ + + +++ + +E + ++ R++
Sbjct: 5 KPKQLTRSDKEEIVENTAEMIESHSIVGILDMQSLPARQLQEIKGELSEFASVRMVRKTL 64
Query: 71 YPMRYSQAYK--VSKFL---CGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVE 125
+ QA K + L L + ++ L ++ + A+ G A +++
Sbjct: 65 MEIAVDQAEKDGIDAVLENPALQPALIFSEKSPFQLYRLIDENKTSAAAQGGEVAPDQIT 124
Query: 126 LPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
+PEG M L++ G V++ G + + + V+ EEG + ++ +L LGI+
Sbjct: 125 IPEGDTGIGPGPMLGKLQQFGAQVQVQDGSIHVQEETVMLEEGDTIDDDAVEVLNQLGIE 184
Query: 186 MATFKLHLICRWS 198
L L +S
Sbjct: 185 PLEIGLDLKVAYS 197
>gi|432329854|ref|YP_007247997.1| ribosomal protein L10 [Methanoregula formicicum SMSP]
gi|432136563|gb|AGB01490.1| ribosomal protein L10 [Methanoregula formicicum SMSP]
Length = 282
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 50/105 (47%)
Query: 81 VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP 140
++K+L G++ + TN ++ K + A+ G A E + +P GP +
Sbjct: 77 LTKYLSGHSAIIFTNDNPFKLYKQLEKTKTKMAAKAGEKAPEDIVVPAGPTSFKPGPIVG 136
Query: 141 FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
L++ G+P + G V++ V ++G ++P+ A L L +K
Sbjct: 137 ELQQAGIPAAIEGGKVKIRETKTVVKKGAVINPKLAAALVKLDVK 181
>gi|88601952|ref|YP_502130.1| acidic ribosomal protein P0 [Methanospirillum hungatei JF-1]
gi|88187414|gb|ABD40411.1| LSU ribosomal protein L10P [Methanospirillum hungatei JF-1]
Length = 282
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 7/134 (5%)
Query: 81 VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP 140
+S L G++ L TN ++ S+ K + AR G TA E + + +GP +
Sbjct: 77 LSSHLSGHSALIFTNENPFKLYSMLEKTKTKMAARPGETAPEDIVVSKGPTSFRPGPIVG 136
Query: 141 FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAE 200
L++ G+P + G V + V + G+ ++ + A L L IK + LI + +
Sbjct: 137 ELQQAGIPAAIEAGKVTIRETKTVVKAGQEINKKLADALAKLDIK--PMDVGLILQAA-- 192
Query: 201 DFELYREGLDESDV 214
Y + ESDV
Sbjct: 193 ---FYEGSIYESDV 203
>gi|373956435|ref|ZP_09616395.1| Tyrosyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
gi|373893035|gb|EHQ28932.1| Tyrosyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
Length = 427
Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 75 YSQAYKVSKFLCGNTGL-FLTNMPKEEVESLFNKYEDYDFARTG-STATEKVELPEGPLE 132
Y +A K S+FL GNTG+ FL + +EV +LF+ ++ AR + V+L
Sbjct: 311 YEKAIKSSEFLFGNTGIEFLNELSDKEVLALFSGVPNFTIARADFGSGVNVVDLLAAQSA 370
Query: 133 QFTHEMEPFLRKQGMPVRLNK----GVVELVSD-------FVVCEEGK 169
F + E Q V +NK V E+ SD F+V ++GK
Sbjct: 371 VFPSKGEAKKMIQSGGVAINKLKVASVDEVYSDAQLINNKFLVAQKGK 418
>gi|303389247|ref|XP_003072856.1| hypothetical protein Eint_050470 [Encephalitozoon intestinalis ATCC
50506]
gi|303301999|gb|ADM11496.1| hypothetical protein Eint_050470 [Encephalitozoon intestinalis ATCC
50506]
Length = 187
Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 68/173 (39%), Gaps = 13/173 (7%)
Query: 12 LSKTKKKGKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKP-SRLLWVGR 70
+ KK KE K + + E Y + V ++ N+ K+ RE SR+L+V +
Sbjct: 1 MGAVTKKSKEKKHAELEKVGKYAEEYPLVAVIENPSISNVILKKIREDFSGVSRILFVRK 60
Query: 71 YPMRYSQAYKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGP 130
R Y + FL E +E Y+ DF G +V + +
Sbjct: 61 KMAR--AVYNMPSM--PKDSFFLMFGDTEAIERA-KTYQYEDFLEKGDVCPARVVIEKQV 115
Query: 131 LEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLG 183
+ EM L PV + ++L D+V CE G+ + A+ILR G
Sbjct: 116 IR--NKEMIEIL-----PVSMKDEQMQLKEDYVACEAGEEVDEVKAKILRFFG 161
>gi|402584249|gb|EJW78191.1| hypothetical protein WUBG_10902, partial [Wuchereria bancrofti]
Length = 82
Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 26 IVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGR 70
+V+ IR V+ Y+ +++F ENMR+ KF E R++ K + + G+
Sbjct: 16 LVDEIRKCVDTYEHLFLFKIENMRSSKFIEIRQKYKNNSRFFYGK 60
>gi|159042315|ref|YP_001541567.1| acidic ribosomal protein P0 [Caldivirga maquilingensis IC-167]
gi|157921150|gb|ABW02577.1| ribosomal protein L10 [Caldivirga maquilingensis IC-167]
Length = 303
Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 44/105 (41%)
Query: 81 VSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP 140
+ K+L G G TN ++ + +A+ G + +P G +
Sbjct: 89 IEKYLSGENGFIFTNENPFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAGNTGINPGPVLS 148
Query: 141 FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIK 185
K +P ++ G + + D V + G ++PE A +LRL+ +K
Sbjct: 149 RFSKLKIPTQIRDGKIWVARDTQVAKPGDTVTPELADLLRLINVK 193
>gi|410720443|ref|ZP_11359799.1| ribosomal protein L10 [Methanobacterium sp. Maddingley MBC34]
gi|410601225|gb|EKQ55745.1| ribosomal protein L10 [Methanobacterium sp. Maddingley MBC34]
Length = 335
Score = 36.6 bits (83), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 114 ARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSP 173
AR GS A + + +P+G + L+K G+P ++ KG + + D + EG +S
Sbjct: 107 ARAGSIAIDDIVVPKGDTGFMPGPILGELQKIGIPAKIEKGKIVITEDKTIVAEGDVISR 166
Query: 174 ESARILRLLGI 184
+ A +L L I
Sbjct: 167 DVAGMLTRLDI 177
>gi|78190545|gb|ABB29594.1| ribosomal protein P0 large subunit [Platynereis dumerilii]
Length = 273
Score = 36.6 bits (83), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 11/113 (9%)
Query: 87 GNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPE-----GPLEQFTHEMEPF 141
GN G T + EV + + A+TG+ A V +P GP E F
Sbjct: 48 GNVGFVFTKLDLSEVREIIMANKVAAPAKTGAIAPCDVSIPAQNTGLGP------EKTSF 101
Query: 142 LRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLI 194
+ +P ++ +G +E++++ + G + A +L +L + T+ L ++
Sbjct: 102 FQALAIPTKIARGTIEILNEVKLLRTGDKVGMSEATLLNMLNVSPFTYGLVIL 154
>gi|403049681|ref|ZP_10904165.1| prolyl-tRNA ligase, partial [SAR86 cluster bacterium SAR86D]
Length = 404
Score = 36.6 bits (83), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 19 GKEHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGR-YPMRYSQ 77
G H+EVI + IRN V++YK + + N+ ++ K FR++++P + GR + M+ S
Sbjct: 107 GPTHEEVITDLIRNNVKSYKELPL----NIYQIQTK-FRDEVRPRYGVMRGREFLMKDSY 161
Query: 78 AYKVSKFLCGNTGLFLTNMPKEEVESLFNKYE--DYDFARTGSTATEK 123
++ + + T L + N K+ +E + +Y+ D G A+E+
Sbjct: 162 SFNIDEACLEETYLAMRNTYKKVLERMGLEYKIVSADSGAIGGDASEE 209
>gi|333910817|ref|YP_004484550.1| 50S ribosomal protein L10 [Methanotorris igneus Kol 5]
gi|63109222|gb|AAY33767.1| ribosomal protein L10 [Methanotorris igneus]
gi|333751406|gb|AEF96485.1| ribosomal protein L10 [Methanotorris igneus Kol 5]
Length = 342
Score = 36.6 bits (83), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 14/89 (15%)
Query: 117 GSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESA 176
GST +P GP F E L+ G+P + KG + + D VV + G+ +S + A
Sbjct: 133 GSTG-----MPPGP---FLGE----LKSVGIPAAIEKGKIVIKEDKVVVKAGEVVSHKLA 180
Query: 177 RILRLLGIKMATFKLHLICRWSAEDFELY 205
IL LGIK L+L+ + ED +Y
Sbjct: 181 TILSTLGIKPIKVGLNLLAAY--EDGIIY 207
>gi|423472066|ref|ZP_17448809.1| tagatose-6-phosphate kinase [Bacillus cereus BAG6O-2]
gi|402429531|gb|EJV61616.1| tagatose-6-phosphate kinase [Bacillus cereus BAG6O-2]
Length = 311
Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 96 MPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGV 155
+ KEE + K+E T S T LP+G F ++M K G+PV ++
Sbjct: 109 LSKEEGTTFLEKFEC--LLTTASLVTISGSLPKGLPTNFYYQMLEICNKNGIPVIMDSSG 166
Query: 156 VELVSDFVVCEEGKPLSPESARILRLLGIKM 186
L + V E+ + P +A + +LLGI M
Sbjct: 167 ESLKNALVNKEKPFAIKPNTAELSQLLGINM 197
>gi|307594167|ref|YP_003900484.1| 50S ribosomal protein L10 [Vulcanisaeta distributa DSM 14429]
gi|307549368|gb|ADN49433.1| ribosomal protein L10 [Vulcanisaeta distributa DSM 14429]
Length = 353
Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 72/182 (39%), Gaps = 25/182 (13%)
Query: 21 EHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRLLWVGRYPMRYSQAYK 80
E K IVN ++ Y++++V N +E+R W+ R R +A
Sbjct: 19 EKKVRIVNELKELFSKYENVFVIDIHETSNRVLQEYR--------FWLRRRGARVIKAKN 70
Query: 81 VSKF-----LCGNTGLFLTNMPKEEVESLFNKYEDYDFAR-TGSTATEKVELPE------ 128
L GN + + E +F+ ++ A+ T + +P
Sbjct: 71 TLVLIALRQLMGNVSEDIEKLFTGENLLIFSNENPFELAKWIWGTGVRREAMPGDIAPFD 130
Query: 129 --GPLEQFTHEMEPFLRKQG---MPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLG 183
P P + K G +P+++ G + +V D VV ++G ++ ++A IL+ L
Sbjct: 131 LVAPAGNTNMSPGPIMSKFGKLKIPIKVQDGKIWIVKDTVVVKKGDKINEDAAEILKKLN 190
Query: 184 IK 185
IK
Sbjct: 191 IK 192
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,288,678,385
Number of Sequences: 23463169
Number of extensions: 129517553
Number of successful extensions: 346250
Number of sequences better than 100.0: 938
Number of HSP's better than 100.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 381
Number of HSP's that attempted gapping in prelim test: 344691
Number of HSP's gapped (non-prelim): 958
length of query: 217
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 80
effective length of database: 9,144,741,214
effective search space: 731579297120
effective search space used: 731579297120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)