Query 035721
Match_columns 308
No_of_seqs 441 out of 1432
Neff 12.0
Searched_HMMs 46136
Date Fri Mar 29 05:45:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035721.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035721hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1455 Lysophospholipase [Lip 100.0 4.3E-46 9.3E-51 273.6 26.8 298 10-308 6-305 (313)
2 PLN02298 hydrolase, alpha/beta 100.0 7.2E-42 1.6E-46 273.4 30.7 301 4-305 4-307 (330)
3 PLN02385 hydrolase; alpha/beta 100.0 2E-41 4.4E-46 272.1 28.9 274 28-303 58-333 (349)
4 PHA02857 monoglyceride lipase; 100.0 3.7E-36 8E-41 235.1 27.9 261 35-307 4-269 (276)
5 PLN02652 hydrolase; alpha/beta 100.0 4.3E-35 9.2E-40 235.7 28.9 270 31-308 110-384 (395)
6 PRK10749 lysophospholipase L2; 100.0 1.4E-34 2.9E-39 230.6 28.8 270 32-307 31-325 (330)
7 COG2267 PldB Lysophospholipase 100.0 4E-35 8.7E-40 227.2 23.6 266 30-299 8-278 (298)
8 TIGR02240 PHA_depoly_arom poly 100.0 3.1E-35 6.7E-40 229.5 20.0 253 37-308 7-263 (276)
9 PLN02824 hydrolase, alpha/beta 100.0 5.5E-35 1.2E-39 230.3 19.4 255 37-308 13-291 (294)
10 PRK00870 haloalkane dehalogena 100.0 3.9E-34 8.5E-39 226.1 22.3 251 42-308 34-298 (302)
11 PRK03592 haloalkane dehalogena 100.0 9.7E-34 2.1E-38 223.4 22.3 256 37-308 12-286 (295)
12 KOG4178 Soluble epoxide hydrol 100.0 1.5E-33 3.2E-38 211.2 20.7 264 32-308 22-317 (322)
13 TIGR01607 PST-A Plasmodium sub 100.0 6.6E-33 1.4E-37 220.0 24.6 265 36-308 2-330 (332)
14 PLN03087 BODYGUARD 1 domain co 100.0 7.2E-34 1.6E-38 231.2 19.5 259 36-307 180-475 (481)
15 PLN02679 hydrolase, alpha/beta 100.0 1.5E-33 3.3E-38 226.7 19.3 257 40-308 69-354 (360)
16 PLN02965 Probable pheophorbida 100.0 4.4E-34 9.6E-39 220.3 15.5 233 60-307 5-249 (255)
17 PRK10673 acyl-CoA esterase; Pr 100.0 3.8E-33 8.2E-38 215.9 19.2 248 43-308 2-252 (255)
18 TIGR03056 bchO_mg_che_rel puta 100.0 1.8E-32 3.9E-37 215.0 20.8 257 35-308 9-277 (278)
19 PRK10349 carboxylesterase BioH 100.0 6.2E-33 1.4E-37 214.5 17.6 242 44-307 4-252 (256)
20 PRK03204 haloalkane dehalogena 100.0 8E-33 1.7E-37 216.2 17.9 255 29-308 12-285 (286)
21 TIGR03611 RutD pyrimidine util 100.0 1.6E-32 3.5E-37 212.8 17.9 251 44-308 1-255 (257)
22 PLN03084 alpha/beta hydrolase 100.0 9.4E-32 2E-36 215.0 22.0 266 28-308 101-381 (383)
23 PLN02578 hydrolase 100.0 1.2E-31 2.6E-36 215.6 20.8 254 35-308 69-352 (354)
24 TIGR03343 biphenyl_bphD 2-hydr 100.0 5E-32 1.1E-36 212.7 17.7 250 41-308 19-280 (282)
25 PRK06489 hypothetical protein; 100.0 1.5E-31 3.3E-36 215.7 18.8 258 38-308 46-354 (360)
26 TIGR01250 pro_imino_pep_2 prol 100.0 5.3E-31 1.1E-35 207.7 19.8 254 37-308 7-287 (288)
27 COG1647 Esterase/lipase [Gener 100.0 7.1E-31 1.5E-35 184.1 15.9 224 58-308 15-241 (243)
28 KOG4409 Predicted hydrolase/ac 100.0 4.2E-30 9E-35 193.2 20.7 271 26-307 60-360 (365)
29 PRK07581 hypothetical protein; 100.0 5.8E-31 1.3E-35 211.3 16.6 258 38-307 22-332 (339)
30 TIGR02427 protocat_pcaD 3-oxoa 100.0 2.2E-31 4.9E-36 205.6 13.3 243 44-308 2-250 (251)
31 TIGR01392 homoserO_Ac_trn homo 100.0 4.5E-31 9.7E-36 212.4 14.6 260 38-308 12-350 (351)
32 TIGR01738 bioH putative pimelo 100.0 1.3E-30 2.8E-35 200.6 16.3 232 58-308 4-245 (245)
33 PRK13604 luxD acyl transferase 100.0 9.4E-29 2E-33 187.9 25.7 237 31-298 9-250 (307)
34 PF12697 Abhydrolase_6: Alpha/ 100.0 2.1E-31 4.6E-36 202.6 10.8 220 61-303 1-228 (228)
35 PLN02211 methyl indole-3-aceta 100.0 1.9E-30 4.2E-35 200.8 15.8 246 39-306 4-265 (273)
36 PRK08775 homoserine O-acetyltr 100.0 6.3E-31 1.4E-35 210.9 13.5 255 38-308 42-336 (343)
37 PRK11126 2-succinyl-6-hydroxy- 100.0 8E-31 1.7E-35 201.3 12.6 230 58-308 2-239 (242)
38 PRK00175 metX homoserine O-ace 100.0 5.8E-30 1.3E-34 207.3 17.4 262 38-308 29-371 (379)
39 PLN02511 hydrolase 100.0 7.5E-30 1.6E-34 206.5 17.4 264 28-299 68-347 (388)
40 KOG1454 Predicted hydrolase/ac 100.0 1.4E-29 3.1E-34 198.2 18.0 268 33-308 27-321 (326)
41 TIGR03695 menH_SHCHC 2-succiny 100.0 1.7E-29 3.7E-34 195.0 15.8 240 58-308 1-250 (251)
42 PLN02894 hydrolase, alpha/beta 100.0 5.3E-28 1.1E-32 196.5 22.3 251 43-307 93-381 (402)
43 TIGR01249 pro_imino_pep_1 prol 100.0 1.2E-28 2.5E-33 194.9 15.7 250 32-294 5-290 (306)
44 PRK05077 frsA fermentation/res 100.0 4.2E-27 9.2E-32 191.2 21.8 241 28-308 165-409 (414)
45 PRK14875 acetoin dehydrogenase 100.0 7.7E-28 1.7E-32 196.3 16.8 241 38-308 115-368 (371)
46 PRK10985 putative hydrolase; P 100.0 1E-27 2.2E-32 190.5 17.0 261 28-296 28-300 (324)
47 PLN02980 2-oxoglutarate decarb 100.0 2E-27 4.3E-32 220.6 16.2 239 57-308 1370-1636(1655)
48 TIGR03100 hydr1_PEP hydrolase, 99.9 7.1E-25 1.5E-29 170.1 22.4 252 38-308 8-272 (274)
49 PRK05855 short chain dehydroge 99.9 8E-26 1.7E-30 195.2 17.3 260 34-307 5-288 (582)
50 KOG2382 Predicted alpha/beta h 99.9 2.8E-25 6E-30 167.0 16.8 257 42-307 36-309 (315)
51 PRK06765 homoserine O-acetyltr 99.9 5.2E-25 1.1E-29 176.8 17.2 261 40-308 39-385 (389)
52 KOG4391 Predicted alpha/beta h 99.9 2.5E-25 5.4E-30 155.5 12.6 215 26-294 49-265 (300)
53 KOG2984 Predicted hydrolase [G 99.9 4.1E-26 8.9E-31 157.6 8.0 237 37-308 26-273 (277)
54 PLN02872 triacylglycerol lipas 99.9 4E-25 8.6E-30 177.4 13.8 276 23-308 36-386 (395)
55 PRK10566 esterase; Provisional 99.9 1.6E-23 3.4E-28 161.4 20.0 197 56-294 25-234 (249)
56 TIGR01836 PHA_synth_III_C poly 99.9 1.2E-23 2.7E-28 169.2 17.4 256 45-307 49-346 (350)
57 KOG1552 Predicted alpha/beta h 99.9 3.9E-23 8.5E-28 149.9 17.4 213 31-307 35-248 (258)
58 PF12695 Abhydrolase_5: Alpha/ 99.9 1E-22 2.2E-27 143.6 16.9 145 60-292 1-145 (145)
59 KOG4667 Predicted esterase [Li 99.9 2.3E-22 5.1E-27 140.6 17.9 234 35-303 14-250 (269)
60 COG0429 Predicted hydrolase of 99.9 4.2E-22 9.1E-27 149.6 17.8 263 27-295 45-319 (345)
61 PF00561 Abhydrolase_1: alpha/ 99.9 1.1E-24 2.3E-29 166.1 2.5 210 87-305 1-229 (230)
62 TIGR01838 PHA_synth_I poly(R)- 99.9 3.2E-21 6.9E-26 159.2 22.8 247 43-299 173-463 (532)
63 KOG1838 Alpha/beta hydrolase [ 99.9 2.4E-21 5.2E-26 150.9 20.7 264 26-296 88-368 (409)
64 PRK11071 esterase YqiA; Provis 99.9 7.9E-22 1.7E-26 143.8 16.7 183 59-307 2-187 (190)
65 COG1506 DAP2 Dipeptidyl aminop 99.9 3.2E-22 6.9E-27 171.2 16.6 240 28-307 362-612 (620)
66 KOG2564 Predicted acetyltransf 99.9 6.3E-22 1.4E-26 144.1 14.3 238 56-307 72-323 (343)
67 TIGR03101 hydr2_PEP hydrolase, 99.9 1.1E-21 2.4E-26 148.9 16.1 129 35-168 4-135 (266)
68 PRK11460 putative hydrolase; P 99.9 9.4E-21 2E-25 142.9 17.6 176 56-305 14-206 (232)
69 PF00326 Peptidase_S9: Prolyl 99.9 5.1E-21 1.1E-25 143.6 11.1 192 76-307 4-205 (213)
70 PRK07868 acyl-CoA synthetase; 99.8 1.6E-19 3.5E-24 163.1 21.1 122 43-170 48-180 (994)
71 PF06342 DUF1057: Alpha/beta h 99.8 9.5E-19 2.1E-23 129.0 20.7 231 56-306 33-294 (297)
72 COG0596 MhpC Predicted hydrola 99.8 1.5E-19 3.3E-24 140.9 16.8 249 40-306 8-277 (282)
73 TIGR01840 esterase_phb esteras 99.8 3.2E-19 6.8E-24 133.4 17.1 121 47-167 2-130 (212)
74 PF01738 DLH: Dienelactone hyd 99.8 2.6E-19 5.6E-24 134.7 16.3 176 46-294 3-191 (218)
75 PLN02442 S-formylglutathione h 99.8 1.8E-18 4E-23 134.5 19.8 212 38-294 26-264 (283)
76 COG2945 Predicted hydrolase of 99.8 1.2E-18 2.6E-23 120.2 16.2 194 32-307 5-203 (210)
77 TIGR02821 fghA_ester_D S-formy 99.8 2.3E-18 4.9E-23 133.8 19.7 210 38-294 21-258 (275)
78 PLN00021 chlorophyllase 99.8 7.5E-19 1.6E-23 137.2 15.9 185 42-297 37-246 (313)
79 PF05448 AXE1: Acetyl xylan es 99.8 1.5E-18 3.3E-23 135.7 17.5 232 28-294 53-305 (320)
80 TIGR00976 /NonD putative hydro 99.8 8.8E-19 1.9E-23 148.8 16.9 131 37-170 2-135 (550)
81 COG3208 GrsT Predicted thioest 99.8 1.1E-18 2.3E-23 126.2 14.0 220 57-307 6-232 (244)
82 PF06500 DUF1100: Alpha/beta h 99.8 1.2E-18 2.6E-23 137.1 12.7 228 28-294 162-395 (411)
83 COG0412 Dienelactone hydrolase 99.8 3.2E-17 6.9E-22 123.1 19.1 186 34-294 5-204 (236)
84 PRK10115 protease 2; Provision 99.8 2.9E-17 6.3E-22 141.8 20.7 233 28-297 413-658 (686)
85 PF03096 Ndr: Ndr family; Int 99.8 3.9E-18 8.5E-23 127.5 13.0 256 34-306 2-274 (283)
86 TIGR01839 PHA_synth_II poly(R) 99.8 3.2E-17 6.9E-22 134.2 18.3 241 43-294 200-483 (560)
87 PF02230 Abhydrolase_2: Phosph 99.8 6.2E-18 1.3E-22 126.7 13.0 182 56-306 12-214 (216)
88 KOG2931 Differentiation-relate 99.8 7.3E-17 1.6E-21 118.9 17.7 259 31-305 22-300 (326)
89 COG4757 Predicted alpha/beta h 99.8 3.1E-17 6.7E-22 116.6 14.7 254 34-307 8-279 (281)
90 PF02273 Acyl_transf_2: Acyl t 99.8 4.3E-17 9.3E-22 116.9 14.7 235 34-299 5-244 (294)
91 COG3458 Acetyl esterase (deace 99.8 1.4E-17 3E-22 121.2 11.2 228 28-294 53-302 (321)
92 COG2021 MET2 Homoserine acetyl 99.7 9.4E-17 2E-21 123.1 14.6 258 40-307 34-364 (368)
93 PF12146 Hydrolase_4: Putative 99.7 1.6E-17 3.5E-22 101.5 8.1 79 41-122 1-79 (79)
94 PF02129 Peptidase_S15: X-Pro 99.7 2.6E-17 5.6E-22 127.8 10.4 129 40-171 1-140 (272)
95 TIGR03230 lipo_lipase lipoprot 99.7 3.1E-16 6.6E-21 126.3 14.0 112 56-168 39-155 (442)
96 PRK10162 acetyl esterase; Prov 99.7 6.3E-15 1.4E-19 116.8 21.3 217 31-294 57-292 (318)
97 PF06821 Ser_hydrolase: Serine 99.7 9.2E-17 2E-21 114.2 9.4 153 61-294 1-155 (171)
98 COG0400 Predicted esterase [Ge 99.7 5.5E-16 1.2E-20 112.6 12.6 173 56-302 16-200 (207)
99 cd00707 Pancreat_lipase_like P 99.7 4.1E-16 8.9E-21 120.4 11.5 112 57-169 35-149 (275)
100 PF08538 DUF1749: Protein of u 99.7 3.7E-15 7.9E-20 112.8 15.9 239 57-307 32-301 (303)
101 TIGR01849 PHB_depoly_PhaZ poly 99.7 1.2E-14 2.5E-19 116.0 17.4 106 58-171 102-212 (406)
102 PF10230 DUF2305: Uncharacteri 99.7 6.4E-15 1.4E-19 113.0 15.5 111 58-169 2-124 (266)
103 KOG2624 Triglyceride lipase-ch 99.6 1.3E-14 2.9E-19 115.4 16.2 146 21-169 38-201 (403)
104 PF09752 DUF2048: Uncharacteri 99.6 7.2E-14 1.6E-18 107.5 19.1 246 45-307 78-345 (348)
105 PF12715 Abhydrolase_7: Abhydr 99.6 1.6E-15 3.4E-20 117.7 9.0 141 26-167 83-260 (390)
106 COG3571 Predicted hydrolase of 99.6 9.8E-14 2.1E-18 93.0 14.4 165 57-294 13-183 (213)
107 KOG3043 Predicted hydrolase re 99.6 5.4E-14 1.2E-18 100.0 12.3 180 35-294 21-211 (242)
108 PF12740 Chlorophyllase2: Chlo 99.6 3.3E-13 7.2E-18 100.5 17.1 179 48-297 8-211 (259)
109 PF05728 UPF0227: Uncharacteri 99.6 2.2E-13 4.8E-18 97.9 15.7 181 61-307 2-185 (187)
110 TIGR03502 lipase_Pla1_cef extr 99.6 3.4E-14 7.5E-19 121.6 13.3 119 34-153 420-576 (792)
111 PF07859 Abhydrolase_3: alpha/ 99.6 1.4E-13 3E-18 103.3 14.4 100 61-169 1-112 (211)
112 PF10503 Esterase_phd: Esteras 99.6 5.9E-13 1.3E-17 98.0 17.0 124 44-167 1-132 (220)
113 PRK05371 x-prolyl-dipeptidyl a 99.6 6.3E-14 1.4E-18 122.1 13.1 219 77-306 270-514 (767)
114 PF00975 Thioesterase: Thioest 99.6 8E-14 1.7E-18 106.0 12.0 102 59-168 1-105 (229)
115 PF06057 VirJ: Bacterial virul 99.6 8.7E-14 1.9E-18 97.7 10.9 181 59-307 3-188 (192)
116 COG0657 Aes Esterase/lipase [L 99.5 1.1E-11 2.5E-16 98.5 21.5 212 39-294 59-289 (312)
117 KOG2565 Predicted hydrolases o 99.5 1E-12 2.2E-17 100.5 13.3 124 36-165 128-262 (469)
118 KOG1515 Arylacetamide deacetyl 99.5 1.3E-11 2.8E-16 96.5 19.6 133 35-171 65-211 (336)
119 COG3243 PhaC Poly(3-hydroxyalk 99.5 9.1E-12 2E-16 97.4 16.8 236 50-294 99-372 (445)
120 COG3545 Predicted esterase of 99.4 3.7E-12 8E-17 87.5 11.8 156 59-294 3-158 (181)
121 COG4188 Predicted dienelactone 99.4 5.3E-13 1.1E-17 103.1 8.0 232 41-299 49-302 (365)
122 KOG2100 Dipeptidyl aminopeptid 99.4 7E-12 1.5E-16 109.2 14.7 209 40-294 506-728 (755)
123 PF03959 FSH1: Serine hydrolas 99.4 5.5E-12 1.2E-16 93.9 11.8 167 57-295 3-204 (212)
124 COG2936 Predicted acyl esteras 99.4 4.4E-12 9.5E-17 104.0 12.1 137 29-168 17-160 (563)
125 PTZ00472 serine carboxypeptida 99.4 2.1E-11 4.5E-16 100.9 16.1 136 31-168 47-217 (462)
126 COG4099 Predicted peptidase [G 99.4 1.4E-11 2.9E-16 91.6 13.0 126 36-166 166-303 (387)
127 KOG4627 Kynurenine formamidase 99.4 4.6E-12 1E-16 88.9 9.7 191 43-294 55-249 (270)
128 KOG2281 Dipeptidyl aminopeptid 99.4 5.5E-11 1.2E-15 97.3 17.2 216 32-294 614-848 (867)
129 PF07224 Chlorophyllase: Chlor 99.4 2.8E-11 6E-16 88.5 12.7 116 45-170 34-160 (307)
130 KOG2551 Phospholipase/carboxyh 99.4 7.5E-11 1.6E-15 84.3 14.5 174 57-307 4-216 (230)
131 KOG3975 Uncharacterized conser 99.3 5.2E-10 1.1E-14 81.2 18.1 240 56-307 27-299 (301)
132 PF03403 PAF-AH_p_II: Platelet 99.3 2E-11 4.3E-16 98.3 11.9 110 56-167 98-262 (379)
133 PF08840 BAAT_C: BAAT / Acyl-C 99.3 6.4E-12 1.4E-16 93.4 6.8 154 115-294 4-164 (213)
134 PRK10252 entF enterobactin syn 99.3 1.2E-10 2.5E-15 110.2 16.9 100 58-166 1068-1170(1296)
135 PF07819 PGAP1: PGAP1-like pro 99.3 7.6E-11 1.6E-15 88.2 10.6 107 57-168 3-124 (225)
136 PF06028 DUF915: Alpha/beta hy 99.2 3.5E-10 7.5E-15 85.5 12.0 205 57-307 10-251 (255)
137 KOG2112 Lysophospholipase [Lip 99.2 3.8E-10 8.3E-15 80.1 11.0 177 58-302 3-199 (206)
138 PF01674 Lipase_2: Lipase (cla 99.2 4.7E-11 1E-15 87.8 6.6 92 59-153 2-96 (219)
139 PF00151 Lipase: Lipase; Inte 99.2 1E-10 2.2E-15 92.2 7.9 114 56-170 69-190 (331)
140 COG3509 LpqC Poly(3-hydroxybut 99.2 2E-09 4.2E-14 80.7 13.3 128 38-167 41-179 (312)
141 PF03583 LIP: Secretory lipase 99.1 8.1E-09 1.8E-13 80.6 17.1 87 76-168 16-114 (290)
142 KOG1553 Predicted alpha/beta h 99.1 8.2E-11 1.8E-15 89.4 5.6 129 32-168 215-346 (517)
143 COG1505 Serine proteases of th 99.1 1.1E-09 2.4E-14 89.5 12.1 230 24-294 387-626 (648)
144 PLN02733 phosphatidylcholine-s 99.1 5.7E-10 1.2E-14 91.1 9.7 92 72-168 107-202 (440)
145 PRK10439 enterobactin/ferric e 99.1 3.5E-08 7.6E-13 80.7 19.4 125 40-167 190-323 (411)
146 PF05990 DUF900: Alpha/beta hy 99.1 2.5E-09 5.3E-14 80.6 10.8 110 57-167 17-137 (233)
147 KOG3101 Esterase D [General fu 99.1 2.1E-09 4.5E-14 76.1 9.4 129 41-169 25-178 (283)
148 PRK04940 hypothetical protein; 99.0 7E-09 1.5E-13 73.2 11.8 35 132-169 60-94 (180)
149 COG3319 Thioesterase domains o 99.0 1.8E-09 4E-14 81.3 9.0 101 59-168 1-104 (257)
150 PF11339 DUF3141: Protein of u 99.0 4.8E-08 1E-12 79.0 17.1 88 77-171 92-179 (581)
151 PF05677 DUF818: Chlamydia CHL 99.0 1.3E-08 2.9E-13 78.0 12.6 116 33-154 114-237 (365)
152 smart00824 PKS_TE Thioesterase 99.0 2.2E-08 4.8E-13 75.1 12.7 86 74-167 14-102 (212)
153 PF12048 DUF3530: Protein of u 99.0 4.4E-07 9.4E-12 71.5 19.9 132 33-167 63-229 (310)
154 KOG3847 Phospholipase A2 (plat 98.9 2.3E-08 5E-13 75.3 11.5 174 56-304 116-341 (399)
155 PF00756 Esterase: Putative es 98.9 2.7E-08 5.8E-13 76.8 11.8 128 41-168 5-151 (251)
156 KOG3253 Predicted alpha/beta h 98.9 1.7E-08 3.6E-13 82.6 9.8 163 57-294 175-347 (784)
157 COG1770 PtrB Protease II [Amin 98.9 1.4E-07 3.1E-12 78.5 14.8 145 27-171 415-566 (682)
158 KOG4840 Predicted hydrolases o 98.9 6.1E-08 1.3E-12 69.4 10.9 108 58-170 36-147 (299)
159 PF05705 DUF829: Eukaryotic pr 98.8 7.4E-07 1.6E-11 68.2 15.5 222 60-308 1-240 (240)
160 KOG2237 Predicted serine prote 98.8 2.1E-08 4.5E-13 82.7 6.8 145 25-169 435-586 (712)
161 COG4782 Uncharacterized protei 98.7 1.4E-07 3.1E-12 73.0 10.2 112 56-168 114-235 (377)
162 cd00312 Esterase_lipase Estera 98.7 4.3E-08 9.4E-13 83.3 8.3 123 43-168 78-214 (493)
163 PF11144 DUF2920: Protein of u 98.7 4.7E-06 1E-10 66.3 18.0 127 41-168 19-220 (403)
164 KOG1551 Uncharacterized conser 98.7 9.3E-07 2E-11 65.3 12.3 244 43-306 101-361 (371)
165 PF05577 Peptidase_S28: Serine 98.7 8.3E-07 1.8E-11 74.1 13.6 110 58-168 29-149 (434)
166 PF10340 DUF2424: Protein of u 98.7 1.5E-06 3.2E-11 68.9 14.0 108 56-170 120-238 (374)
167 COG3150 Predicted esterase [Ge 98.6 1.2E-06 2.5E-11 60.1 11.4 90 61-168 2-92 (191)
168 COG3946 VirJ Type IV secretory 98.6 8.9E-08 1.9E-12 74.9 6.9 90 57-154 259-348 (456)
169 PF02450 LCAT: Lecithin:choles 98.6 5E-07 1.1E-11 73.8 11.4 116 35-168 33-161 (389)
170 PF05057 DUF676: Putative seri 98.6 3E-07 6.5E-12 68.8 8.7 92 57-151 3-97 (217)
171 PLN02209 serine carboxypeptida 98.6 3.5E-05 7.5E-10 63.7 21.0 136 32-168 40-213 (437)
172 COG1073 Hydrolases of the alph 98.5 6E-06 1.3E-10 65.4 13.8 240 42-306 31-292 (299)
173 COG1075 LipA Predicted acetylt 98.5 2.9E-07 6.2E-12 73.5 6.1 102 58-168 59-165 (336)
174 PF00135 COesterase: Carboxyle 98.4 1.9E-06 4.2E-11 74.3 10.4 124 43-168 108-246 (535)
175 COG4814 Uncharacterized protei 98.4 4.9E-06 1.1E-10 61.3 10.0 108 59-168 46-177 (288)
176 COG2272 PnbA Carboxylesterase 98.4 2.3E-06 5.1E-11 69.4 8.9 125 43-168 79-218 (491)
177 PF02089 Palm_thioest: Palmito 98.4 7.5E-07 1.6E-11 67.6 5.9 107 58-167 5-116 (279)
178 PLN02633 palmitoyl protein thi 98.3 4.3E-05 9.4E-10 58.8 13.4 103 58-167 25-131 (314)
179 PF00450 Peptidase_S10: Serine 98.3 1.4E-05 3E-10 66.6 11.3 135 32-168 12-182 (415)
180 PF04301 DUF452: Protein of un 98.2 2.6E-05 5.6E-10 57.2 9.5 79 58-167 11-90 (213)
181 KOG2183 Prolylcarboxypeptidase 98.2 1.2E-05 2.5E-10 63.6 8.0 105 59-166 81-201 (492)
182 KOG3967 Uncharacterized conser 98.2 7.8E-05 1.7E-09 53.5 11.4 112 56-171 99-231 (297)
183 PF07082 DUF1350: Protein of u 98.1 4E-05 8.6E-10 57.0 10.1 99 57-165 16-123 (250)
184 PLN02606 palmitoyl-protein thi 98.1 4.9E-05 1.1E-09 58.5 10.4 102 58-167 26-132 (306)
185 KOG3724 Negative regulator of 98.1 6.2E-05 1.3E-09 64.5 11.4 107 57-168 88-221 (973)
186 KOG2541 Palmitoyl protein thio 98.0 0.00023 5.1E-09 53.2 12.1 101 59-166 24-127 (296)
187 COG0627 Predicted esterase [Ge 98.0 2.4E-05 5.2E-10 61.5 7.2 113 56-170 52-190 (316)
188 COG2819 Predicted hydrolase of 98.0 0.00036 7.8E-09 52.6 12.5 39 130-168 135-173 (264)
189 PF04083 Abhydro_lipase: Parti 98.0 1.8E-05 3.9E-10 45.7 4.4 50 24-73 5-58 (63)
190 PF08386 Abhydrolase_4: TAP-li 97.9 2.5E-05 5.3E-10 50.8 5.2 52 250-303 34-86 (103)
191 KOG2182 Hydrolytic enzymes of 97.9 0.00015 3.2E-09 59.1 9.5 111 58-168 86-208 (514)
192 PF10142 PhoPQ_related: PhoPQ- 97.9 0.0006 1.3E-08 54.7 12.7 137 130-295 170-306 (367)
193 PLN03016 sinapoylglucose-malat 97.8 0.00071 1.5E-08 56.1 12.8 137 32-168 38-211 (433)
194 COG2382 Fes Enterochelin ester 97.8 0.00068 1.5E-08 52.0 11.6 109 56-168 96-213 (299)
195 cd00741 Lipase Lipase. Lipase 97.8 9E-05 1.9E-09 52.4 6.1 55 112-167 9-67 (153)
196 PF06259 Abhydrolase_8: Alpha/ 97.7 0.0026 5.6E-08 45.6 12.2 111 56-166 17-143 (177)
197 PLN02517 phosphatidylcholine-s 97.6 0.00016 3.4E-09 60.8 6.3 91 74-167 157-263 (642)
198 COG4553 DepA Poly-beta-hydroxy 97.5 0.0028 6.1E-08 48.2 11.3 107 56-170 101-212 (415)
199 KOG2369 Lecithin:cholesterol a 97.5 0.00037 8.1E-09 56.6 6.8 86 73-165 124-223 (473)
200 cd00519 Lipase_3 Lipase (class 97.4 0.0011 2.3E-08 50.5 8.4 56 110-166 107-167 (229)
201 KOG1282 Serine carboxypeptidas 97.4 0.0042 9.1E-08 51.4 11.9 138 29-168 42-214 (454)
202 PF01083 Cutinase: Cutinase; 97.4 0.00045 9.7E-09 50.0 5.6 78 87-168 40-123 (179)
203 COG2939 Carboxypeptidase C (ca 97.4 0.0016 3.4E-08 53.7 9.2 121 46-168 89-237 (498)
204 PF01764 Lipase_3: Lipase (cla 97.3 0.00082 1.8E-08 46.7 6.1 39 113-152 46-84 (140)
205 KOG2521 Uncharacterized conser 97.3 0.016 3.4E-07 46.3 13.0 234 58-307 38-286 (350)
206 PF11187 DUF2974: Protein of u 97.2 0.0013 2.8E-08 49.3 6.2 49 116-166 70-122 (224)
207 KOG1516 Carboxylesterase and r 97.1 0.0035 7.7E-08 54.4 8.8 119 43-166 96-231 (545)
208 PF11288 DUF3089: Protein of u 97.0 0.0021 4.6E-08 47.0 5.4 75 78-153 38-116 (207)
209 COG4947 Uncharacterized protei 96.9 0.0072 1.6E-07 42.2 7.0 37 132-168 101-137 (227)
210 PF07519 Tannase: Tannase and 96.8 0.024 5.2E-07 48.0 11.2 126 38-168 9-151 (474)
211 COG2830 Uncharacterized protei 96.8 0.014 2.9E-07 40.3 7.8 77 59-166 12-89 (214)
212 KOG4388 Hormone-sensitive lipa 96.8 0.015 3.3E-07 48.8 9.4 112 45-168 384-509 (880)
213 PLN02454 triacylglycerol lipas 96.7 0.0073 1.6E-07 49.1 6.9 40 112-152 207-248 (414)
214 PF05576 Peptidase_S37: PS-10 96.6 0.0038 8.1E-08 50.2 4.4 107 57-168 62-170 (448)
215 PLN02162 triacylglycerol lipas 96.5 0.01 2.2E-07 48.9 6.6 35 116-151 263-297 (475)
216 PLN00413 triacylglycerol lipas 96.3 0.017 3.7E-07 47.7 6.7 34 117-151 270-303 (479)
217 PLN02213 sinapoylglucose-malat 96.2 0.036 7.9E-07 44.4 8.3 83 87-169 2-98 (319)
218 PLN02310 triacylglycerol lipas 96.1 0.016 3.5E-07 47.1 5.8 21 132-152 209-229 (405)
219 PLN02571 triacylglycerol lipas 96.0 0.027 5.8E-07 46.0 6.6 39 114-152 207-246 (413)
220 KOG4372 Predicted alpha/beta h 95.8 0.015 3.3E-07 46.7 4.4 88 56-149 78-167 (405)
221 TIGR03712 acc_sec_asp2 accesso 95.7 1.1 2.3E-05 37.7 16.5 124 33-169 267-392 (511)
222 PLN02408 phospholipase A1 95.7 0.026 5.7E-07 45.3 5.2 40 114-153 181-221 (365)
223 KOG1202 Animal-type fatty acid 95.6 0.041 8.8E-07 50.6 6.7 98 56-168 2121-2220(2376)
224 PLN02934 triacylglycerol lipas 95.6 0.024 5.2E-07 47.3 4.8 35 116-151 306-340 (515)
225 PLN03037 lipase class 3 family 95.4 0.018 4E-07 48.1 3.7 21 132-152 318-338 (525)
226 PF06441 EHN: Epoxide hydrolas 95.4 0.049 1.1E-06 35.8 4.9 39 32-72 68-106 (112)
227 KOG1283 Serine carboxypeptidas 95.3 0.14 3E-06 40.0 7.8 133 35-169 7-168 (414)
228 PLN02324 triacylglycerol lipas 95.3 0.039 8.5E-07 45.0 5.2 40 113-152 195-235 (415)
229 COG4287 PqaA PhoPQ-activated p 95.3 0.087 1.9E-06 41.9 6.8 48 246-294 325-372 (507)
230 PLN02847 triacylglycerol lipas 95.2 0.042 9E-07 46.8 5.2 23 130-152 249-271 (633)
231 PF05277 DUF726: Protein of un 95.2 0.086 1.9E-06 42.3 6.8 39 130-168 218-261 (345)
232 PLN02753 triacylglycerol lipas 94.9 0.032 7E-07 46.8 3.8 39 113-151 289-331 (531)
233 PLN02802 triacylglycerol lipas 94.9 0.057 1.2E-06 45.2 5.1 38 115-152 312-350 (509)
234 PLN02761 lipase class 3 family 94.7 0.07 1.5E-06 44.8 5.2 38 114-151 271-313 (527)
235 PF08237 PE-PPE: PE-PPE domain 94.7 0.12 2.7E-06 38.9 6.2 65 86-153 2-69 (225)
236 COG5153 CVT17 Putative lipase 94.5 0.11 2.3E-06 39.8 5.3 50 113-165 258-307 (425)
237 KOG4540 Putative lipase essent 94.5 0.11 2.3E-06 39.8 5.3 50 113-165 258-307 (425)
238 PLN02719 triacylglycerol lipas 94.5 0.086 1.9E-06 44.2 5.1 40 113-152 275-318 (518)
239 PLN02213 sinapoylglucose-malat 93.6 0.17 3.7E-06 40.7 5.2 58 250-307 233-313 (319)
240 KOG4569 Predicted lipase [Lipi 93.4 0.15 3.3E-06 41.1 4.7 36 116-152 156-191 (336)
241 PF09949 DUF2183: Uncharacteri 93.0 0.76 1.6E-05 29.6 6.5 84 74-162 12-97 (100)
242 KOG2029 Uncharacterized conser 92.8 0.16 3.5E-06 43.2 4.1 53 114-166 507-571 (697)
243 PF06850 PHB_depo_C: PHB de-po 92.2 0.17 3.7E-06 36.6 3.0 45 250-294 134-181 (202)
244 PF09994 DUF2235: Uncharacteri 92.0 1.8 4E-05 34.0 8.8 95 59-153 2-113 (277)
245 PF03283 PAE: Pectinacetyleste 91.8 0.84 1.8E-05 37.3 7.0 53 115-167 138-195 (361)
246 PF00450 Peptidase_S10: Serine 91.5 0.15 3.2E-06 42.8 2.5 58 250-307 330-412 (415)
247 PLN03016 sinapoylglucose-malat 91.1 0.52 1.1E-05 39.6 5.2 58 250-307 347-427 (433)
248 COG3673 Uncharacterized conser 88.9 6.4 0.00014 31.3 9.0 96 57-152 30-142 (423)
249 KOG1282 Serine carboxypeptidas 88.9 1 2.2E-05 37.8 5.2 58 250-307 363-444 (454)
250 PF06309 Torsin: Torsin; Inte 87.3 5.3 0.00011 27.0 6.8 32 56-87 50-82 (127)
251 COG0529 CysC Adenylylsulfate k 86.6 9.1 0.0002 27.7 7.9 38 57-94 21-59 (197)
252 KOG2385 Uncharacterized conser 86.3 2.2 4.7E-05 36.1 5.5 40 130-169 445-489 (633)
253 COG3340 PepE Peptidase E [Amin 85.3 4.9 0.00011 29.8 6.3 38 58-95 32-71 (224)
254 PRK05282 (alpha)-aspartyl dipe 78.8 21 0.00045 27.3 8.0 38 58-95 31-70 (233)
255 PF01583 APS_kinase: Adenylyls 78.7 6 0.00013 28.0 4.7 37 58-94 1-38 (156)
256 PRK02399 hypothetical protein; 78.2 36 0.00078 28.4 9.5 101 62-163 6-128 (406)
257 PF10081 Abhydrolase_9: Alpha/ 78.2 31 0.00068 27.1 8.7 39 130-168 107-148 (289)
258 cd01714 ETF_beta The electron 77.2 13 0.00028 27.7 6.5 72 78-163 68-145 (202)
259 PRK12467 peptide synthase; Pro 77.0 8.8 0.00019 42.5 7.4 98 58-164 3692-3792(3956)
260 COG1448 TyrB Aspartate/tyrosin 76.2 11 0.00024 30.8 6.1 88 57-165 170-263 (396)
261 TIGR02884 spore_pdaA delta-lac 74.2 5.9 0.00013 30.1 4.1 35 59-93 187-221 (224)
262 PF07519 Tannase: Tannase and 73.9 5.1 0.00011 34.4 4.0 49 246-294 349-407 (474)
263 TIGR02069 cyanophycinase cyano 73.5 31 0.00066 26.8 7.8 39 57-95 27-66 (250)
264 PF05576 Peptidase_S37: PS-10 72.4 3.9 8.5E-05 33.7 2.8 51 240-294 341-391 (448)
265 cd03146 GAT1_Peptidase_E Type 72.3 27 0.00059 26.2 7.2 39 58-96 31-70 (212)
266 PF06792 UPF0261: Uncharacteri 71.5 55 0.0012 27.4 9.0 101 62-163 4-126 (403)
267 KOG4389 Acetylcholinesterase/B 70.7 9.2 0.0002 32.5 4.6 120 43-167 120-255 (601)
268 PF12242 Eno-Rase_NADH_b: NAD( 70.6 14 0.0003 22.4 4.1 43 112-154 18-62 (78)
269 COG2240 PdxK Pyridoxal/pyridox 70.2 52 0.0011 26.0 9.6 97 64-171 11-117 (281)
270 PLN02840 tRNA dimethylallyltra 69.4 29 0.00063 29.2 7.2 78 57-140 19-119 (421)
271 cd03818 GT1_ExpC_like This fam 69.1 44 0.00096 27.9 8.6 38 61-101 2-39 (396)
272 COG4822 CbiK Cobalamin biosynt 68.7 33 0.00071 25.7 6.4 38 57-94 137-175 (265)
273 TIGR02764 spore_ybaN_pdaB poly 66.4 8.6 0.00019 28.2 3.5 35 59-93 152-188 (191)
274 PRK06490 glutamine amidotransf 66.3 58 0.0013 25.1 10.3 85 57-150 7-103 (239)
275 PF03358 FMN_red: NADPH-depend 64.8 10 0.00022 26.5 3.5 37 61-97 3-42 (152)
276 TIGR02873 spore_ylxY probable 64.4 9.5 0.00021 29.9 3.5 34 59-93 231-264 (268)
277 KOG1532 GTPase XAB1, interacts 63.4 73 0.0016 25.2 8.4 100 56-155 16-149 (366)
278 PF08484 Methyltransf_14: C-me 63.2 31 0.00067 24.6 5.5 52 111-165 51-102 (160)
279 PRK14729 miaA tRNA delta(2)-is 63.2 50 0.0011 26.5 7.2 75 60-140 5-101 (300)
280 PF13207 AAA_17: AAA domain; P 62.9 12 0.00027 24.7 3.5 31 61-94 1-32 (121)
281 cd07198 Patatin Patatin-like p 60.6 17 0.00036 26.2 4.0 22 133-154 27-48 (172)
282 KOG3551 Syntrophins (type beta 59.4 12 0.00025 30.6 3.1 43 28-70 448-497 (506)
283 PF00448 SRP54: SRP54-type pro 59.3 69 0.0015 23.8 7.0 72 77-162 74-147 (196)
284 cd07207 Pat_ExoU_VipD_like Exo 58.6 20 0.00044 26.3 4.3 33 119-153 16-48 (194)
285 PF14606 Lipase_GDSL_3: GDSL-l 58.3 44 0.00095 24.3 5.6 29 109-138 72-100 (178)
286 COG1073 Hydrolases of the alph 58.1 1.1 2.3E-05 35.4 -2.8 107 58-166 88-198 (299)
287 PF00326 Peptidase_S9: Prolyl 57.7 38 0.00082 25.2 5.7 42 57-98 143-186 (213)
288 cd03145 GAT1_cyanophycinase Ty 57.6 63 0.0014 24.4 6.7 38 58-95 29-67 (217)
289 PF00698 Acyl_transf_1: Acyl t 57.0 8.2 0.00018 31.1 2.1 21 131-151 83-103 (318)
290 TIGR03709 PPK2_rel_1 polyphosp 56.1 18 0.00039 28.2 3.6 38 58-95 55-93 (264)
291 PF11713 Peptidase_C80: Peptid 55.7 8.4 0.00018 27.3 1.7 53 92-144 59-116 (157)
292 cd07210 Pat_hypo_W_succinogene 55.6 28 0.0006 26.4 4.6 21 133-153 29-49 (221)
293 PRK06171 sorbitol-6-phosphate 55.1 72 0.0016 24.7 7.1 33 61-96 11-43 (266)
294 PLN02748 tRNA dimethylallyltra 55.1 64 0.0014 27.8 6.9 78 57-140 20-120 (468)
295 cd07225 Pat_PNPLA6_PNPLA7 Pata 54.9 24 0.00053 28.3 4.3 21 133-153 44-64 (306)
296 PRK14974 cell division protein 54.7 1.2E+02 0.0026 24.9 8.2 65 84-162 220-286 (336)
297 PF10605 3HBOH: 3HB-oligomer h 54.6 30 0.00064 30.5 4.9 38 133-170 286-324 (690)
298 PF09314 DUF1972: Domain of un 54.3 85 0.0018 23.1 9.5 92 61-152 6-114 (185)
299 PRK00091 miaA tRNA delta(2)-is 54.0 63 0.0014 26.1 6.4 67 58-127 3-92 (307)
300 PRK10279 hypothetical protein; 54.0 21 0.00045 28.6 3.8 32 120-153 23-54 (300)
301 smart00827 PKS_AT Acyl transfe 53.5 12 0.00026 29.7 2.5 21 131-151 81-101 (298)
302 PF02230 Abhydrolase_2: Phosph 52.8 58 0.0013 24.4 5.9 58 58-123 155-214 (216)
303 COG0426 FpaA Uncharacterized f 52.8 95 0.0021 25.9 7.2 74 60-157 250-332 (388)
304 PF08433 KTI12: Chromatin asso 52.3 46 0.001 26.2 5.4 39 60-98 2-41 (270)
305 KOG1200 Mitochondrial/plastidi 52.2 82 0.0018 23.5 6.1 33 61-96 16-48 (256)
306 PF03205 MobB: Molybdopterin g 51.9 44 0.00094 23.2 4.7 41 61-101 2-43 (140)
307 KOG2872 Uroporphyrinogen decar 51.3 55 0.0012 25.8 5.4 31 57-95 251-281 (359)
308 TIGR03707 PPK2_P_aer polyphosp 51.2 23 0.00051 27.0 3.5 71 58-145 30-102 (230)
309 cd07209 Pat_hypo_Ecoli_Z1214_l 50.7 27 0.00059 26.3 3.9 22 133-154 27-48 (215)
310 COG3727 Vsr DNA G:T-mismatch r 50.5 49 0.0011 22.5 4.4 15 78-92 100-114 (150)
311 TIGR03131 malonate_mdcH malona 49.9 28 0.00061 27.7 4.0 22 130-151 74-95 (295)
312 cd07228 Pat_NTE_like_bacteria 49.3 34 0.00075 24.7 4.1 22 133-154 29-50 (175)
313 cd07227 Pat_Fungal_NTE1 Fungal 49.3 16 0.00036 28.6 2.5 21 133-153 39-59 (269)
314 COG1752 RssA Predicted esteras 48.9 29 0.00062 27.9 3.9 33 119-153 28-60 (306)
315 KOG0781 Signal recognition par 48.8 88 0.0019 27.0 6.5 86 63-162 443-537 (587)
316 PF03853 YjeF_N: YjeF-related 48.6 37 0.00081 24.4 4.1 34 57-91 24-57 (169)
317 KOG1209 1-Acyl dihydroxyaceton 48.0 42 0.00091 25.3 4.2 36 58-95 6-41 (289)
318 cd07205 Pat_PNPLA6_PNPLA7_NTE1 47.6 44 0.00096 24.0 4.5 21 133-153 29-49 (175)
319 KOG2170 ATPase of the AAA+ sup 46.9 38 0.00082 27.1 4.0 31 56-86 107-138 (344)
320 PF01656 CbiA: CobQ/CobB/MinD/ 46.2 41 0.00089 24.5 4.2 34 62-95 2-36 (195)
321 PF03976 PPK2: Polyphosphate k 46.2 13 0.00028 28.3 1.5 38 58-95 30-68 (228)
322 PF05724 TPMT: Thiopurine S-me 45.8 29 0.00064 26.2 3.3 29 60-94 39-67 (218)
323 TIGR00128 fabD malonyl CoA-acy 45.6 18 0.00039 28.6 2.3 21 131-151 82-102 (290)
324 cd07208 Pat_hypo_Ecoli_yjju_li 45.3 37 0.0008 26.5 4.0 22 134-155 29-50 (266)
325 cd07230 Pat_TGL4-5_like Triacy 44.9 20 0.00044 30.3 2.6 36 119-156 90-125 (421)
326 COG1506 DAP2 Dipeptidyl aminop 44.8 1.1E+02 0.0025 27.6 7.3 64 57-126 550-615 (620)
327 cd05312 NAD_bind_1_malic_enz N 44.7 53 0.0012 25.9 4.6 83 61-151 27-125 (279)
328 cd04951 GT1_WbdM_like This fam 44.6 1.7E+02 0.0036 23.7 9.9 37 60-96 2-39 (360)
329 PRK06523 short chain dehydroge 43.7 1.3E+02 0.0027 23.2 6.8 32 61-95 11-42 (260)
330 COG4088 Predicted nucleotide k 43.3 35 0.00076 25.6 3.2 35 60-94 2-37 (261)
331 COG4221 Short-chain alcohol de 43.2 45 0.00099 25.6 3.9 33 60-95 7-39 (246)
332 COG0541 Ffh Signal recognition 43.1 2.1E+02 0.0046 24.4 7.9 73 77-163 173-247 (451)
333 PRK13256 thiopurine S-methyltr 42.8 30 0.00065 26.4 3.0 29 61-95 46-74 (226)
334 PTZ00445 p36-lilke protein; Pr 42.3 1.4E+02 0.0031 22.5 6.2 65 75-142 31-102 (219)
335 TIGR00632 vsr DNA mismatch end 41.9 89 0.0019 20.9 4.7 15 78-92 99-113 (117)
336 PLN02735 carbamoyl-phosphate s 41.6 1.3E+02 0.0028 29.5 7.5 101 43-151 557-667 (1102)
337 cd07212 Pat_PNPLA9 Patatin-lik 41.4 24 0.00052 28.5 2.4 19 135-153 35-53 (312)
338 PRK00131 aroK shikimate kinase 41.2 44 0.00095 23.8 3.7 34 58-94 3-37 (175)
339 COG0552 FtsY Signal recognitio 41.0 2E+02 0.0044 23.6 9.9 94 57-170 137-234 (340)
340 COG1255 Uncharacterized protei 40.9 37 0.0008 22.5 2.7 22 74-95 24-45 (129)
341 PF09419 PGP_phosphatase: Mito 40.9 1.3E+02 0.0027 21.8 5.7 54 81-142 35-88 (168)
342 PRK12828 short chain dehydroge 40.7 45 0.00098 25.1 3.8 31 61-94 9-39 (239)
343 PF00004 AAA: ATPase family as 40.5 1.1E+02 0.0023 20.3 6.8 55 62-127 1-56 (132)
344 COG1087 GalE UDP-glucose 4-epi 40.5 2E+02 0.0043 23.3 8.7 26 77-102 15-40 (329)
345 COG3887 Predicted signaling pr 40.3 1E+02 0.0022 27.3 5.9 52 111-166 320-377 (655)
346 PF10686 DUF2493: Protein of u 40.3 75 0.0016 19.0 3.8 32 58-92 31-63 (71)
347 cd01521 RHOD_PspE2 Member of t 40.2 91 0.002 20.2 4.7 33 57-92 64-96 (110)
348 PRK09072 short chain dehydroge 40.1 52 0.0011 25.5 4.1 32 61-95 7-38 (263)
349 TIGR02883 spore_cwlD N-acetylm 39.8 1.4E+02 0.0029 22.0 6.0 38 89-127 2-41 (189)
350 KOG1252 Cystathionine beta-syn 39.8 2.1E+02 0.0046 23.5 8.7 60 35-96 187-249 (362)
351 PRK07933 thymidylate kinase; V 39.7 94 0.002 23.4 5.2 40 61-100 2-42 (213)
352 cd07232 Pat_PLPL Patain-like p 39.5 26 0.00057 29.5 2.5 40 119-160 84-123 (407)
353 TIGR01425 SRP54_euk signal rec 39.4 1.2E+02 0.0025 26.0 6.1 68 81-162 177-246 (429)
354 PRK08177 short chain dehydroge 39.4 54 0.0012 24.6 4.1 33 61-96 3-35 (225)
355 PRK07053 glutamine amidotransf 39.4 1.8E+02 0.0038 22.4 9.2 83 59-150 4-100 (234)
356 COG1763 MobB Molybdopterin-gua 39.3 79 0.0017 22.6 4.5 39 60-98 3-42 (161)
357 COG0031 CysK Cysteine synthase 39.1 2.1E+02 0.0045 23.1 9.7 97 61-165 171-291 (300)
358 COG3946 VirJ Type IV secretory 39.0 1.7E+02 0.0036 24.7 6.6 95 58-155 48-144 (456)
359 PF14253 AbiH: Bacteriophage a 38.8 21 0.00046 27.9 1.8 15 130-144 233-247 (270)
360 COG3640 CooC CO dehydrogenase 38.8 73 0.0016 24.5 4.3 34 61-94 2-37 (255)
361 cd03129 GAT1_Peptidase_E_like 38.7 1.7E+02 0.0036 21.9 7.4 38 58-95 29-66 (210)
362 PRK05368 homoserine O-succinyl 38.7 61 0.0013 26.0 4.2 37 111-152 118-154 (302)
363 KOG1199 Short-chain alcohol de 38.6 76 0.0017 22.9 4.2 84 58-147 8-97 (260)
364 TIGR00521 coaBC_dfp phosphopan 38.3 2.4E+02 0.0053 23.8 8.3 77 59-139 113-193 (390)
365 PRK00652 lpxK tetraacyldisacch 38.3 1.1E+02 0.0023 25.0 5.6 27 74-101 67-93 (325)
366 COG0482 TrmU Predicted tRNA(5- 37.8 95 0.0021 25.6 5.1 61 58-126 4-64 (356)
367 PRK11613 folP dihydropteroate 37.7 2.1E+02 0.0046 22.8 8.1 58 75-145 165-224 (282)
368 cd03131 GATase1_HTS Type 1 glu 37.6 23 0.0005 25.7 1.6 38 111-153 81-118 (175)
369 COG5441 Uncharacterized conser 37.5 2.2E+02 0.0047 22.9 8.8 100 61-161 4-122 (401)
370 cd07224 Pat_like Patatin-like 37.3 62 0.0013 24.8 4.0 21 134-154 31-51 (233)
371 PRK09135 pteridine reductase; 37.1 61 0.0013 24.7 4.1 32 61-95 8-39 (249)
372 PRK07523 gluconate 5-dehydroge 37.1 59 0.0013 25.0 4.0 32 61-95 12-43 (255)
373 PRK07326 short chain dehydroge 37.1 65 0.0014 24.3 4.2 31 61-94 8-38 (237)
374 PF06833 MdcE: Malonate decarb 37.0 93 0.002 23.8 4.7 58 88-150 67-127 (234)
375 PF03681 UPF0150: Uncharacteri 37.0 36 0.00078 18.2 2.0 32 85-122 12-43 (48)
376 KOG1610 Corticosteroid 11-beta 36.8 62 0.0013 26.0 3.9 31 60-93 30-60 (322)
377 cd01983 Fer4_NifH The Fer4_Nif 36.8 1E+02 0.0022 18.9 4.5 31 63-93 3-34 (99)
378 PF03721 UDPG_MGDP_dh_N: UDP-g 36.7 54 0.0012 24.0 3.5 30 62-95 3-32 (185)
379 PRK00726 murG undecaprenyldiph 36.5 2.4E+02 0.0052 23.1 8.0 35 61-96 5-39 (357)
380 TIGR01626 ytfJ_HI0045 conserve 36.1 1.8E+02 0.0038 21.5 6.4 54 40-94 43-102 (184)
381 COG0400 Predicted esterase [Ge 36.1 1.9E+02 0.0041 21.8 6.7 40 56-95 144-185 (207)
382 PRK08339 short chain dehydroge 35.9 68 0.0015 24.9 4.2 32 61-95 10-41 (263)
383 cd07206 Pat_TGL3-4-5_SDP1 Tria 35.6 47 0.001 26.6 3.1 22 133-154 98-119 (298)
384 cd01819 Patatin_and_cPLA2 Pata 35.5 72 0.0016 22.5 3.9 18 133-150 29-46 (155)
385 cd07229 Pat_TGL3_like Triacylg 35.4 38 0.00082 28.3 2.7 37 119-157 100-136 (391)
386 PRK05876 short chain dehydroge 35.3 68 0.0015 25.2 4.1 32 61-95 8-39 (275)
387 PF09370 TIM-br_sig_trns: TIM- 34.9 63 0.0014 25.2 3.6 83 77-165 161-248 (268)
388 cd02020 CMPK Cytidine monophos 34.7 72 0.0016 21.8 3.8 30 61-93 1-31 (147)
389 PRK06953 short chain dehydroge 34.4 76 0.0016 23.8 4.1 32 61-95 3-34 (222)
390 PRK12429 3-hydroxybutyrate deh 34.4 61 0.0013 24.8 3.7 32 61-95 6-37 (258)
391 PRK05665 amidotransferase; Pro 34.2 1E+02 0.0023 23.7 4.8 37 109-150 72-108 (240)
392 TIGR00176 mobB molybdopterin-g 34.1 97 0.0021 21.9 4.3 37 62-98 2-39 (155)
393 PRK08265 short chain dehydroge 33.7 74 0.0016 24.6 4.1 32 61-95 8-39 (261)
394 TIGR00174 miaA tRNA isopenteny 33.7 1.2E+02 0.0025 24.3 5.0 73 62-140 2-97 (287)
395 PRK06720 hypothetical protein; 33.6 84 0.0018 22.6 4.0 31 61-94 18-48 (169)
396 PRK10867 signal recognition pa 33.5 3.1E+02 0.0068 23.6 9.0 69 80-162 177-247 (433)
397 cd07211 Pat_PNPLA8 Patatin-lik 33.4 66 0.0014 25.9 3.8 17 135-151 44-60 (308)
398 PF01075 Glyco_transf_9: Glyco 33.4 66 0.0014 24.6 3.7 37 57-93 104-144 (247)
399 PRK05571 ribose-5-phosphate is 33.3 1.7E+02 0.0038 20.6 5.8 76 75-165 15-90 (148)
400 PRK08085 gluconate 5-dehydroge 33.2 77 0.0017 24.3 4.1 32 61-95 11-42 (254)
401 PRK15181 Vi polysaccharide bio 33.2 62 0.0013 26.5 3.7 31 62-95 18-48 (348)
402 PRK08703 short chain dehydroge 33.1 85 0.0018 23.8 4.3 31 61-94 8-38 (239)
403 COG4667 Predicted esterase of 33.1 36 0.00078 26.5 2.0 30 133-162 40-70 (292)
404 PRK08643 acetoin reductase; Va 33.0 79 0.0017 24.3 4.1 32 61-95 4-35 (256)
405 PRK06924 short chain dehydroge 32.9 76 0.0016 24.3 4.0 33 61-96 3-35 (251)
406 PLN02653 GDP-mannose 4,6-dehyd 32.9 1E+02 0.0022 25.1 4.9 33 61-96 8-40 (340)
407 PRK06696 uridine kinase; Valid 32.9 1.4E+02 0.0029 22.7 5.2 37 57-93 20-57 (223)
408 PRK12824 acetoacetyl-CoA reduc 32.8 77 0.0017 24.0 4.0 32 61-95 4-35 (245)
409 PRK05717 oxidoreductase; Valid 32.8 79 0.0017 24.3 4.1 32 61-95 12-43 (255)
410 PRK05786 fabG 3-ketoacyl-(acyl 32.7 70 0.0015 24.2 3.8 32 61-95 7-38 (238)
411 PF01012 ETF: Electron transfe 32.5 1.8E+02 0.004 20.6 6.1 64 76-153 48-113 (164)
412 PRK07814 short chain dehydroge 32.5 80 0.0017 24.5 4.1 32 61-95 12-43 (263)
413 PLN02924 thymidylate kinase 32.2 1.6E+02 0.0034 22.4 5.4 41 57-97 14-55 (220)
414 TIGR03127 RuMP_HxlB 6-phospho 32.1 2E+02 0.0042 20.8 6.9 32 61-93 32-63 (179)
415 PF03698 UPF0180: Uncharacteri 32.1 55 0.0012 20.1 2.4 19 76-94 11-29 (80)
416 COG0552 FtsY Signal recognitio 32.1 2.9E+02 0.0062 22.7 9.3 75 79-162 214-291 (340)
417 PRK08226 short chain dehydroge 32.1 81 0.0018 24.3 4.1 32 61-95 8-39 (263)
418 COG0331 FabD (acyl-carrier-pro 32.1 69 0.0015 25.9 3.6 21 131-151 84-104 (310)
419 PF00578 AhpC-TSA: AhpC/TSA fa 32.1 1.5E+02 0.0032 19.4 5.2 57 32-94 6-67 (124)
420 PRK08220 2,3-dihydroxybenzoate 31.9 1.4E+02 0.0031 22.7 5.4 33 61-96 10-42 (252)
421 PLN02166 dTDP-glucose 4,6-dehy 31.9 71 0.0015 27.3 3.9 33 62-97 123-155 (436)
422 PRK06550 fabG 3-ketoacyl-(acyl 31.9 88 0.0019 23.6 4.2 32 61-95 7-38 (235)
423 COG2230 Cfa Cyclopropane fatty 31.8 69 0.0015 25.4 3.4 47 114-163 58-104 (283)
424 PRK06194 hypothetical protein; 31.7 75 0.0016 25.0 3.9 32 61-95 8-39 (287)
425 PRK07454 short chain dehydroge 31.7 83 0.0018 23.9 4.0 32 61-95 8-39 (241)
426 COG1540 Uncharacterized protei 31.7 1.2E+02 0.0025 23.3 4.4 49 33-92 203-251 (252)
427 cd07231 Pat_SDP1-like Sugar-De 31.7 80 0.0017 25.6 3.8 22 131-152 95-116 (323)
428 PRK09936 hypothetical protein; 31.6 1.3E+02 0.0028 24.0 4.8 28 74-101 39-66 (296)
429 TIGR01472 gmd GDP-mannose 4,6- 31.6 80 0.0017 25.7 4.1 33 61-96 2-34 (343)
430 PRK12745 3-ketoacyl-(acyl-carr 31.6 83 0.0018 24.1 4.1 33 61-96 4-36 (256)
431 PRK03094 hypothetical protein; 31.4 62 0.0014 19.9 2.5 19 76-94 11-29 (80)
432 TIGR01963 PHB_DH 3-hydroxybuty 31.4 88 0.0019 23.9 4.1 32 61-95 3-34 (255)
433 COG0324 MiaA tRNA delta(2)-iso 31.3 2.9E+02 0.0062 22.4 7.7 76 59-140 3-101 (308)
434 TIGR01830 3oxo_ACP_reduc 3-oxo 31.2 59 0.0013 24.5 3.2 30 63-95 2-31 (239)
435 PRK07024 short chain dehydroge 31.1 79 0.0017 24.4 3.8 32 61-95 4-35 (257)
436 cd07204 Pat_PNPLA_like Patatin 31.0 85 0.0018 24.2 3.9 20 135-154 34-53 (243)
437 PRK06114 short chain dehydroge 31.0 85 0.0018 24.1 4.0 32 61-95 10-41 (254)
438 PRK03846 adenylylsulfate kinas 31.0 1.3E+02 0.0029 22.2 4.8 37 57-93 22-59 (198)
439 PLN02206 UDP-glucuronate decar 30.9 65 0.0014 27.6 3.5 34 62-98 122-155 (442)
440 KOG1465 Translation initiation 30.9 2.9E+02 0.0062 22.3 7.5 35 133-170 233-277 (353)
441 PRK07231 fabG 3-ketoacyl-(acyl 30.9 95 0.0021 23.6 4.3 32 61-95 7-38 (251)
442 PRK10751 molybdopterin-guanine 30.9 1.6E+02 0.0035 21.4 5.0 42 58-99 5-47 (173)
443 COG3529 Predicted nucleic-acid 30.8 89 0.0019 17.8 2.8 49 254-305 6-54 (66)
444 PRK07035 short chain dehydroge 30.8 85 0.0018 24.0 4.0 31 61-94 10-40 (252)
445 COG1058 CinA Predicted nucleot 30.7 2.3E+02 0.005 22.2 6.0 61 63-144 13-73 (255)
446 PRK13948 shikimate kinase; Pro 30.7 92 0.002 22.8 3.8 34 58-94 9-43 (182)
447 PLN02572 UDP-sulfoquinovose sy 30.6 95 0.0021 26.6 4.5 30 62-94 50-79 (442)
448 PRK05653 fabG 3-ketoacyl-(acyl 30.5 88 0.0019 23.7 4.0 32 61-95 7-38 (246)
449 cd02036 MinD Bacterial cell di 30.5 1.2E+02 0.0026 21.6 4.5 21 75-95 17-37 (179)
450 TIGR01829 AcAcCoA_reduct aceto 30.5 94 0.002 23.5 4.1 32 61-95 2-33 (242)
451 KOG2316 Predicted ATPase (PP-l 30.1 1.8E+02 0.0039 22.1 5.0 63 78-147 55-119 (277)
452 TIGR02816 pfaB_fam PfaB family 29.9 44 0.00095 29.4 2.3 24 130-153 263-286 (538)
453 PRK06101 short chain dehydroge 29.7 87 0.0019 23.8 3.8 31 61-94 3-33 (240)
454 PRK14194 bifunctional 5,10-met 29.5 80 0.0017 25.4 3.5 38 114-152 143-182 (301)
455 PRK07478 short chain dehydroge 29.5 98 0.0021 23.7 4.1 32 61-95 8-39 (254)
456 PRK13255 thiopurine S-methyltr 29.4 77 0.0017 24.0 3.3 15 80-94 53-67 (218)
457 cd02022 DPCK Dephospho-coenzym 29.4 80 0.0017 22.9 3.4 34 61-97 1-34 (179)
458 PRK06483 dihydromonapterin red 29.4 91 0.002 23.6 3.9 32 61-95 4-35 (236)
459 PRK06849 hypothetical protein; 29.3 1.1E+02 0.0025 25.5 4.7 22 76-97 18-39 (389)
460 PLN03209 translocon at the inn 29.3 1.1E+02 0.0024 27.2 4.6 34 59-95 80-113 (576)
461 PF13200 DUF4015: Putative gly 29.3 2.1E+02 0.0046 23.3 5.8 66 62-127 2-73 (316)
462 TIGR03371 cellulose_yhjQ cellu 29.2 1.2E+02 0.0027 23.1 4.6 39 60-98 3-42 (246)
463 TIGR02026 BchE magnesium-proto 29.2 4E+02 0.0086 23.4 8.1 24 76-99 26-50 (497)
464 PHA02114 hypothetical protein 29.1 1.1E+02 0.0023 19.6 3.3 34 59-93 83-116 (127)
465 PF03949 Malic_M: Malic enzyme 29.1 81 0.0018 24.6 3.4 84 61-151 27-126 (255)
466 PRK12481 2-deoxy-D-gluconate 3 29.1 98 0.0021 23.8 4.0 31 61-94 10-40 (251)
467 PRK07069 short chain dehydroge 29.1 92 0.002 23.8 3.9 31 62-95 2-32 (251)
468 PRK05866 short chain dehydroge 29.1 91 0.002 24.8 3.9 32 61-95 42-73 (293)
469 PRK10964 ADP-heptose:LPS hepto 29.0 1.1E+02 0.0024 24.7 4.4 34 58-91 178-215 (322)
470 TIGR03206 benzo_BadH 2-hydroxy 29.0 99 0.0022 23.5 4.1 32 61-95 5-36 (250)
471 PRK12826 3-ketoacyl-(acyl-carr 28.9 97 0.0021 23.6 4.0 32 61-95 8-39 (251)
472 PF03033 Glyco_transf_28: Glyc 28.9 70 0.0015 21.7 2.9 35 61-96 2-36 (139)
473 COG0859 RfaF ADP-heptose:LPS h 28.6 1.1E+02 0.0023 25.0 4.3 36 58-93 175-215 (334)
474 PRK05993 short chain dehydroge 28.6 91 0.002 24.4 3.8 32 61-95 6-37 (277)
475 COG1089 Gmd GDP-D-mannose dehy 28.5 1.1E+02 0.0024 24.4 4.0 36 61-99 4-39 (345)
476 PRK03482 phosphoglycerate muta 28.4 2.3E+02 0.0049 21.2 5.8 37 109-148 121-157 (215)
477 KOG1201 Hydroxysteroid 17-beta 28.4 1.2E+02 0.0025 24.4 4.1 39 58-99 37-75 (300)
478 cd07218 Pat_iPLA2 Calcium-inde 28.3 1.1E+02 0.0023 23.8 4.0 20 135-154 33-52 (245)
479 PRK06935 2-deoxy-D-gluconate 3 28.1 99 0.0022 23.8 3.9 32 61-95 17-48 (258)
480 COG3007 Uncharacterized paraqu 28.1 1.5E+02 0.0033 23.7 4.6 41 114-154 21-64 (398)
481 TIGR02821 fghA_ester_D S-formy 28.0 3E+02 0.0065 21.6 6.8 60 58-126 211-273 (275)
482 PRK07067 sorbitol dehydrogenas 28.0 1E+02 0.0022 23.7 4.0 32 61-95 8-39 (257)
483 cd02037 MRP-like MRP (Multiple 28.0 1.4E+02 0.0031 21.2 4.4 38 61-98 2-40 (169)
484 cd07221 Pat_PNPLA3 Patatin-lik 28.0 1.1E+02 0.0024 23.8 4.1 21 134-154 34-54 (252)
485 PF03575 Peptidase_S51: Peptid 27.8 59 0.0013 22.9 2.4 21 76-96 3-23 (154)
486 PRK05693 short chain dehydroge 27.8 1E+02 0.0022 24.1 4.0 32 61-95 3-34 (274)
487 PLN03050 pyridoxine (pyridoxam 27.8 1.4E+02 0.003 23.2 4.5 33 60-93 62-94 (246)
488 PRK06200 2,3-dihydroxy-2,3-dih 27.7 98 0.0021 23.9 3.8 31 61-94 8-38 (263)
489 COG0218 Predicted GTPase [Gene 27.6 83 0.0018 23.4 3.1 26 244-269 129-154 (200)
490 cd07220 Pat_PNPLA2 Patatin-lik 27.6 1.1E+02 0.0023 23.9 3.9 21 134-154 38-58 (249)
491 PF01734 Patatin: Patatin-like 27.5 63 0.0014 23.3 2.7 20 133-152 28-47 (204)
492 PRK07074 short chain dehydroge 27.5 1.1E+02 0.0023 23.6 4.0 32 61-95 4-35 (257)
493 KOG3349 Predicted glycosyltran 27.3 1.5E+02 0.0033 21.0 4.0 54 38-91 59-132 (170)
494 PRK12939 short chain dehydroge 27.3 1.1E+02 0.0024 23.3 4.0 31 61-94 9-39 (250)
495 PRK12823 benD 1,6-dihydroxycyc 27.3 1.1E+02 0.0024 23.6 4.0 32 61-95 10-41 (260)
496 PRK13394 3-hydroxybutyrate deh 27.3 99 0.0021 23.8 3.8 32 61-95 9-40 (262)
497 PRK08628 short chain dehydroge 27.3 1.1E+02 0.0024 23.5 4.1 32 61-95 9-40 (258)
498 COG2403 Predicted GTPase [Gene 27.3 1.7E+02 0.0036 24.5 4.9 50 45-95 111-164 (449)
499 PRK08945 putative oxoacyl-(acy 27.2 1.1E+02 0.0023 23.4 4.0 32 61-95 14-45 (247)
500 COG1856 Uncharacterized homolo 27.1 2.9E+02 0.0063 21.2 8.6 111 76-189 100-214 (275)
No 1
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=100.00 E-value=4.3e-46 Score=273.59 Aligned_cols=298 Identities=50% Similarity=0.853 Sum_probs=274.7
Q ss_pred cccCccCCCCcccccccccccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeE
Q 035721 10 NEQSLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFAT 89 (308)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v 89 (308)
...++|..+..++++...++.....++++.+|.++....|.|..+.+++..|+++||++..+.+.++.++..|+..||.|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v 85 (313)
T KOG1455|consen 6 NRRSLAGELSEEEYYGDGGVTYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAV 85 (313)
T ss_pred cCcccccccchhhhcCCCccceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeE
Confidence 34566778888888888888889999999999999999999977657789999999999998777889999999999999
Q ss_pred EEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 90 CAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 90 ~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
+++|++|||.|++...+..+++..++|+...++.+..+.. .+.+..++||||||.+++.++.++|+..+|+|+++|.+.
T Consensus 86 ~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~ 165 (313)
T KOG1455|consen 86 YAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCK 165 (313)
T ss_pred EEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccc
Confidence 9999999999999988888999999999999998766544 777999999999999999999999999999999999999
Q ss_pred CCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCC
Q 035721 169 ISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEE 248 (308)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (308)
..+...+.......+..+..++|+|...+.. ......+++++.+.....++..+...+++++..++++...++.+.+.+
T Consensus 166 i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~-d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~ 244 (313)
T KOG1455|consen 166 ISEDTKPHPPVISILTLLSKLIPTWKIVPTK-DIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNE 244 (313)
T ss_pred cCCccCCCcHHHHHHHHHHHhCCceeecCCc-cccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999977777 788999999999999999999999999999999999999999999999
Q ss_pred CCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 249 VEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 249 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+++|.+++||+.|.+++++.++.+++...+.+.++.+|||.-|.++ .++++..+.|+.+|
T Consensus 245 vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI 305 (313)
T KOG1455|consen 245 VTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDI 305 (313)
T ss_pred ccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHH
Confidence 9999999999999999999999999999888999999999999999 68888787777653
No 2
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=7.2e-42 Score=273.37 Aligned_cols=301 Identities=41% Similarity=0.745 Sum_probs=212.7
Q ss_pred cCCCCCccc-CccCCCCcccccccccccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHH
Q 035721 4 HPVAEANEQ-SLFGSLTPDEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLF 82 (308)
Q Consensus 4 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l 82 (308)
|+...+.++ ..|...+.++++...++..+..++...||.+|+|+.|.+....+++++|||+||++.+..+.+..++..|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L 83 (330)
T PLN02298 4 MSDHATETEVHFWGETPEEEYYALKGIKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFL 83 (330)
T ss_pred cCCCCCCCCccccccCCHHHHhhccCCccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHH
Confidence 334444444 3477788889998889999999999999999999999876432457899999999876554567788889
Q ss_pred HHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEE
Q 035721 83 AKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLI 161 (308)
Q Consensus 83 ~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~v 161 (308)
.++||+|+++|+||||.|++......+++.+++|+.++++.+..... ...+++|+||||||.+++.++.++|++|+++|
T Consensus 84 ~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lv 163 (330)
T PLN02298 84 AQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAV 163 (330)
T ss_pred HhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEE
Confidence 98999999999999999986555445788899999999999986421 34589999999999999999999999999999
Q ss_pred EeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHH
Q 035721 162 LNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRD 241 (308)
Q Consensus 162 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (308)
+++|...........+.............+........ ..................++..+..................
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (330)
T PLN02298 164 LVAPMCKISDKIRPPWPIPQILTFVARFLPTLAIVPTA-DLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDY 242 (330)
T ss_pred EecccccCCcccCCchHHHHHHHHHHHHCCCCccccCC-CcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHH
Confidence 99997654432222222222223333333332211111 11111111122222222233333333334444444444344
Q ss_pred hhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhh
Q 035721 242 LQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVF 305 (308)
Q Consensus 242 ~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~ 305 (308)
....+.++++|+|+++|++|.++|++.++.+++.++.+++++++++++||.++ ++|+...+.+.
T Consensus 243 ~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~ 307 (330)
T PLN02298 243 LGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVR 307 (330)
T ss_pred HHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHH
Confidence 55678899999999999999999999999999988656799999999999999 88876544443
No 3
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=2e-41 Score=272.14 Aligned_cols=274 Identities=35% Similarity=0.660 Sum_probs=196.8
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccC
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHI 107 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 107 (308)
++.+++.++.+.+|.+|+|..|+|.++ .++++|||+||++++...+|+.+++.|+++||+|+++|+||||.|++.....
T Consensus 58 ~~~~~~~~~~~~~g~~l~~~~~~p~~~-~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~ 136 (349)
T PLN02385 58 GIKTEESYEVNSRGVEIFSKSWLPENS-RPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYI 136 (349)
T ss_pred CcceeeeeEEcCCCCEEEEEEEecCCC-CCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCc
Confidence 455667778889999999999998654 4689999999999887656788999999889999999999999998765544
Q ss_pred CCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh
Q 035721 108 PDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
.+++++++|+.++++.+..... ...+++|+||||||.+++.++.++|++++++|+++|....................+
T Consensus 137 ~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~ 216 (349)
T PLN02385 137 PSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILL 216 (349)
T ss_pred CCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHH
Confidence 5888999999999998875421 344799999999999999999999999999999998765443222222222333333
Q ss_pred hhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccCh
Q 035721 187 AWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDP 266 (308)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 266 (308)
....+........ .+....+.+.............+...........++....+....+.++++|+|+++|++|.++++
T Consensus 217 ~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~ 295 (349)
T PLN02385 217 ANLLPKAKLVPQK-DLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDP 295 (349)
T ss_pred HHHCCCceecCCC-ccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccCh
Confidence 3333332221111 122222222222111111122222233444445555544556677889999999999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHH
Q 035721 267 ACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVEL 303 (308)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~ 303 (308)
+.++.+++.+..+++++++++++||.++ ++|+++.+.
T Consensus 296 ~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~ 333 (349)
T PLN02385 296 SVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQ 333 (349)
T ss_pred HHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHH
Confidence 9999999988656789999999999999 899874333
No 4
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=3.7e-36 Score=235.05 Aligned_cols=261 Identities=18% Similarity=0.274 Sum_probs=175.2
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
++...||.+|+|+.|.|.. .++++|+++||+++++. .|..+++.|.++||+|+++|+||||.|++......++.+++
T Consensus 4 ~~~~~~g~~l~~~~~~~~~--~~~~~v~llHG~~~~~~-~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~ 80 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPIT--YPKALVFISHGAGEHSG-RYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYV 80 (276)
T ss_pred eeecCCCCEEEEEeccCCC--CCCEEEEEeCCCccccc-hHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHH
Confidence 5667899999999998853 45788888899998877 67899999999999999999999999986443333556667
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhh-hCCCc
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAW-LVPTW 193 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 193 (308)
+|+.+.++.+.... ...+++++|||+||.+|+.++.++|++++++|+++|...... ............. ..+..
T Consensus 81 ~d~~~~l~~~~~~~-~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~----~~~~~~~~~~~~~~~~~~~ 155 (276)
T PHA02857 81 RDVVQHVVTIKSTY-PGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEA----VPRLNLLAAKLMGIFYPNK 155 (276)
T ss_pred HHHHHHHHHHHhhC-CCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccccc----ccHHHHHHHHHHHHhCCCC
Confidence 77777777665432 345899999999999999999999999999999998654211 1111111111111 11111
Q ss_pred ccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHH
Q 035721 194 RVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELY 273 (308)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 273 (308)
.... ........+.........++....................+....+.++++|+++++|++|.++|++.++.+.
T Consensus 156 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~ 232 (276)
T PHA02857 156 IVGK---LCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFM 232 (276)
T ss_pred ccCC---CCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHH
Confidence 0000 0001111111112222223322222222333333333334556678899999999999999999999999999
Q ss_pred HHhcCCCCcEEEecCCccccc-CCc---hhhHHHhhhc
Q 035721 274 KRAASKDKTLSIYPGMWHQLI-GEP---EENVELVFGE 307 (308)
Q Consensus 274 ~~~~~~~~~~~~~~~~gH~~~-~~~---~~~~~~i~~~ 307 (308)
+.+. +++++.+++++||.++ +.+ +++.+.+.++
T Consensus 233 ~~~~-~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~ 269 (276)
T PHA02857 233 QHAN-CNREIKIYEGAKHHLHKETDEVKKSVMKEIETW 269 (276)
T ss_pred HHcc-CCceEEEeCCCcccccCCchhHHHHHHHHHHHH
Confidence 8875 3689999999999999 655 3455555554
No 5
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=4.3e-35 Score=235.71 Aligned_cols=270 Identities=28% Similarity=0.452 Sum_probs=189.9
Q ss_pred ccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCc
Q 035721 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDL 110 (308)
Q Consensus 31 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 110 (308)
.....+...+|..+++..|.|..+ +++++||++||++++.. .|..+++.|.++||+|+++|+||||.|++......++
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~~~-~~~~~Vl~lHG~~~~~~-~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~ 187 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPAAG-EMRGILIIIHGLNEHSG-RYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSL 187 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCCCC-CCceEEEEECCchHHHH-HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCH
Confidence 455667788888999999988654 45789999999988766 5688999999999999999999999998865555577
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcC---CCccEEEEeCCcCCCCcCCCCCchhhhhHHHhh
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQK---GAWDGLILNGAMCGISQKFKPPWPLEHLLFTVA 187 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (308)
+.+++|+.++++.+.... +..+++++||||||.+++.++. +| ++++++|+.+|....... ............
T Consensus 188 ~~~~~Dl~~~l~~l~~~~-~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~---~~~~~~~~~l~~ 262 (395)
T PLN02652 188 DYVVEDTEAFLEKIRSEN-PGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPA---HPIVGAVAPIFS 262 (395)
T ss_pred HHHHHHHHHHHHHHHHhC-CCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccc---hHHHHHHHHHHH
Confidence 888999999999998763 4458999999999999998765 55 479999999987543321 111111112222
Q ss_pred hhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChH
Q 035721 188 WLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPA 267 (308)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~ 267 (308)
...+.+...... ........++........++.........................+.++++|+|+++|++|.++|++
T Consensus 263 ~~~p~~~~~~~~-~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~ 341 (395)
T PLN02652 263 LVAPRFQFKGAN-KRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPL 341 (395)
T ss_pred HhCCCCcccCcc-cccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHH
Confidence 233332221111 1111112222222222233333332333334344444434456678899999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEecCCccccc-C-CchhhHHHhhhcC
Q 035721 268 CVEELYKRAASKDKTLSIYPGMWHQLI-G-EPEENVELVFGEM 308 (308)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~gH~~~-~-~~~~~~~~i~~~i 308 (308)
.++.+++.+.+++++++++++++|.++ + +++++.+.+.++|
T Consensus 342 ~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL 384 (395)
T PLN02652 342 ASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWM 384 (395)
T ss_pred HHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHH
Confidence 999999987655689999999999997 5 7888988888764
No 6
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=1.4e-34 Score=230.60 Aligned_cols=270 Identities=16% Similarity=0.227 Sum_probs=178.7
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc-----c
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-----H 106 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-----~ 106 (308)
++.++...+|.+++|..+++.. ++++||++||++++.. .|..++..|.++||+|+++|+||||.|+.... .
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~~---~~~~vll~HG~~~~~~-~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~ 106 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAPH---HDRVVVICPGRIESYV-KYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGH 106 (330)
T ss_pred cceEEEcCCCCEEEEEEccCCC---CCcEEEEECCccchHH-HHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCc
Confidence 5567778899999999998753 3678999999988776 45678888888999999999999999975321 2
Q ss_pred CCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh
Q 035721 107 IPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186 (308)
Q Consensus 107 ~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
..+++++++|+.++++.+.... +..+++++||||||.+++.++.++|++++++|+++|........ ............
T Consensus 107 ~~~~~~~~~d~~~~~~~~~~~~-~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~-~~~~~~~~~~~~ 184 (330)
T PRK10749 107 VERFNDYVDDLAAFWQQEIQPG-PYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPL-PSWMARRILNWA 184 (330)
T ss_pred cccHHHHHHHHHHHHHHHHhcC-CCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCC-CcHHHHHHHHHH
Confidence 2478899999999998875432 34589999999999999999999999999999999876543211 111111111111
Q ss_pred hhhC---CCcccc----cCCCCCCCcccccH----HHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEE
Q 035721 187 AWLV---PTWRVV----PTRGSLPMVSFKEE----WKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLI 255 (308)
Q Consensus 187 ~~~~---~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~ 255 (308)
.... ...... .............. .....+..++.........................+.++++|+|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Li 264 (330)
T PRK10749 185 EGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLL 264 (330)
T ss_pred HHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEE
Confidence 1110 000000 00000011111111 112223333322121223333444433333445667889999999
Q ss_pred EeeCCCcccChHHHHHHHHHhcC-----CCCcEEEecCCccccc-CCc---hhhHHHhhhc
Q 035721 256 CHGGDDVVCDPACVEELYKRAAS-----KDKTLSIYPGMWHQLI-GEP---EENVELVFGE 307 (308)
Q Consensus 256 i~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~-~~~---~~~~~~i~~~ 307 (308)
++|++|.+++++.++.+++.++. +++++++++|+||.++ |.+ +.+.+.+.++
T Consensus 265 i~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~f 325 (330)
T PRK10749 265 LQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDF 325 (330)
T ss_pred EEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHH
Confidence 99999999999999988887732 3568999999999999 665 3455555544
No 7
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=100.00 E-value=4e-35 Score=227.23 Aligned_cols=266 Identities=28% Similarity=0.422 Sum_probs=206.2
Q ss_pred cccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCC-CccccCC
Q 035721 30 SHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSD-GLVAHIP 108 (308)
Q Consensus 30 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~-~~~~~~~ 108 (308)
...+.++...||..++|..|.+..+ ++.+||++||++.+...| ..++..|..+||.|+++|+||||.|. +...+..
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~~--~~g~Vvl~HG~~Eh~~ry-~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~ 84 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPEP--PKGVVVLVHGLGEHSGRY-EELADDLAARGFDVYALDLRGHGRSPRGQRGHVD 84 (298)
T ss_pred ccccceeecCCCceEEEEeecCCCC--CCcEEEEecCchHHHHHH-HHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCch
Confidence 3456688899999999999987754 348999999999988755 67999999999999999999999998 6666666
Q ss_pred CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhh
Q 035721 109 DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAW 188 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (308)
++.++.+|+.++++.+.... ...+++++||||||.|++.++.+++.+++++|+.+|.......................
T Consensus 85 ~f~~~~~dl~~~~~~~~~~~-~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~ 163 (298)
T COG2267 85 SFADYVDDLDAFVETIAEPD-PGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGR 163 (298)
T ss_pred hHHHHHHHHHHHHHHHhccC-CCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccccc
Confidence 79999999999999998643 66799999999999999999999999999999999987765300011111111222223
Q ss_pred hCCCccccc--CCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHH-HhhhhcCCCCcceEEEeeCCCcccC
Q 035721 189 LVPTWRVVP--TRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSR-DLQGRFEEVEVPMLICHGGDDVVCD 265 (308)
Q Consensus 189 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~P~l~i~g~~D~~~~ 265 (308)
..+.+.... ..........+++.....+..++..........+......... ........+++|+|+++|++|.+++
T Consensus 164 ~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~ 243 (298)
T COG2267 164 IRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVD 243 (298)
T ss_pred cccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCcccc
Confidence 333333222 1113455667788888999999987777777777776666644 3344467789999999999999999
Q ss_pred -hHHHHHHHHHhcCCCCcEEEecCCcccccCCchh
Q 035721 266 -PACVEELYKRAASKDKTLSIYPGMWHQLIGEPEE 299 (308)
Q Consensus 266 -~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 299 (308)
.+...++.+....+++++++++|+.|.++.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~ 278 (298)
T COG2267 244 NVEGLARFFERAGSPDKELKVIPGAYHELLNEPDR 278 (298)
T ss_pred CcHHHHHHHHhcCCCCceEEecCCcchhhhcCcch
Confidence 7999999999888889999999999999944443
No 8
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=3.1e-35 Score=229.53 Aligned_cols=253 Identities=16% Similarity=0.106 Sum_probs=165.9
Q ss_pred EcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHH
Q 035721 37 TNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVED 116 (308)
Q Consensus 37 ~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 116 (308)
...+|.+++|..++.++ .+++|||+||++++.. .|..+.+.|.+ +|+|+++|+||||.|+.+.. .++++++++|
T Consensus 7 ~~~~~~~~~~~~~~~~~---~~~plvllHG~~~~~~-~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~~ 80 (276)
T TIGR02240 7 IDLDGQSIRTAVRPGKE---GLTPLLIFNGIGANLE-LVFPFIEALDP-DLEVIAFDVPGVGGSSTPRH-PYRFPGLAKL 80 (276)
T ss_pred eccCCcEEEEEEecCCC---CCCcEEEEeCCCcchH-HHHHHHHHhcc-CceEEEECCCCCCCCCCCCC-cCcHHHHHHH
Confidence 35588899997753222 2568999999998887 67889999976 49999999999999986543 3689999999
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhC-CCccc
Q 035721 117 AISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLV-PTWRV 195 (308)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 195 (308)
+.++++.++.+ +++|+||||||.+++.+|.++|++|+++|++++................. ....... .....
T Consensus 81 ~~~~i~~l~~~-----~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 154 (276)
T TIGR02240 81 AARMLDYLDYG-----QVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMM-ASPRRYIQPSHGI 154 (276)
T ss_pred HHHHHHHhCcC-----ceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHh-cCchhhhcccccc
Confidence 99999998766 99999999999999999999999999999999876432111100000000 0000000 00000
Q ss_pred ccCCCCCCCccc-ccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH-HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHH
Q 035721 196 VPTRGSLPMVSF-KEEWKRKLALSSPRRPVARPRAATALELLRVS-RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELY 273 (308)
Q Consensus 196 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 273 (308)
.... ......+ .++........... ............... .+....+.++++|+++++|++|++++++..+.+.
T Consensus 155 ~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~ 230 (276)
T TIGR02240 155 HIAP-DIYGGAFRRDPELAMAHASKVR---SGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLA 230 (276)
T ss_pred chhh-hhccceeeccchhhhhhhhhcc---cCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHH
Confidence 0000 0000000 01111101000000 000111111111110 1123447889999999999999999999999999
Q ss_pred HHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 274 KRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 274 ~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+.+ ++++++++++ ||+++ ++|+++++.+.+++
T Consensus 231 ~~~--~~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl 263 (276)
T TIGR02240 231 WRI--PNAELHIIDD-GHLFLITRAEAVAPIIMKFL 263 (276)
T ss_pred HhC--CCCEEEEEcC-CCchhhccHHHHHHHHHHHH
Confidence 988 6789999985 99999 99999999988763
No 9
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=5.5e-35 Score=230.35 Aligned_cols=255 Identities=19% Similarity=0.162 Sum_probs=166.7
Q ss_pred EcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc------ccCCCc
Q 035721 37 TNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV------AHIPDL 110 (308)
Q Consensus 37 ~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~------~~~~~~ 110 (308)
.+.+|.+++|...+++ .++|||+||+++++. .|+.+.+.|+++ |+|+++|+||||.|+.+. ...+++
T Consensus 13 ~~~~~~~i~y~~~G~~-----~~~vlllHG~~~~~~-~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~ 85 (294)
T PLN02824 13 WRWKGYNIRYQRAGTS-----GPALVLVHGFGGNAD-HWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTF 85 (294)
T ss_pred EEEcCeEEEEEEcCCC-----CCeEEEECCCCCChh-HHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCH
Confidence 3457889999886532 468999999999887 778999999887 899999999999998653 134689
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhC
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLV 190 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (308)
+++++|+.++++.+..+ +++++||||||.+++.+|.++|++|+++|++++....................+....
T Consensus 86 ~~~a~~l~~~l~~l~~~-----~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (294)
T PLN02824 86 ETWGEQLNDFCSDVVGD-----PAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLL 160 (294)
T ss_pred HHHHHHHHHHHHHhcCC-----CeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHH
Confidence 99999999999998776 9999999999999999999999999999999985422111111111111111111000
Q ss_pred CCcc-----cccCC-----CC-----CCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHH--HHHhhhhcCCCCcce
Q 035721 191 PTWR-----VVPTR-----GS-----LPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRV--SRDLQGRFEEVEVPM 253 (308)
Q Consensus 191 ~~~~-----~~~~~-----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~ 253 (308)
.... ..... .. +................. ............+... .......+.++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 237 (294)
T PLN02824 161 RETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRP---GLEPGAVDVFLDFISYSGGPLPEELLPAVKCPV 237 (294)
T ss_pred hchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhc---cCCchHHHHHHHHhccccccchHHHHhhcCCCe
Confidence 0000 00000 00 000000000011111100 0000011111111110 011234577899999
Q ss_pred EEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 254 LICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 254 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++|+|++|.+++.+.++.+.+.. +++++++++++||+++ ++|+++++.|.+++
T Consensus 238 lvi~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 291 (294)
T PLN02824 238 LIAWGEKDPWEPVELGRAYANFD--AVEDFIVLPGVGHCPQDEAPELVNPLIESFV 291 (294)
T ss_pred EEEEecCCCCCChHHHHHHHhcC--CccceEEeCCCCCChhhhCHHHHHHHHHHHH
Confidence 99999999999999888877765 5689999999999999 99999999988764
No 10
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=3.9e-34 Score=226.14 Aligned_cols=251 Identities=18% Similarity=0.094 Sum_probs=158.7
Q ss_pred cEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc-cCCCcchHHHHHHHH
Q 035721 42 LRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-HIPDLNPVVEDAISF 120 (308)
Q Consensus 42 ~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~d~~~~ 120 (308)
.+++|...+.+ .+|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+.. ..++++++++|+.++
T Consensus 34 ~~i~y~~~G~~----~~~~lvliHG~~~~~~-~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~ 108 (302)
T PRK00870 34 LRMHYVDEGPA----DGPPVLLLHGEPSWSY-LYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSW 108 (302)
T ss_pred EEEEEEecCCC----CCCEEEEECCCCCchh-hHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHH
Confidence 57888776543 2568999999988876 67899999988899999999999999976542 236889999999999
Q ss_pred HHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCC
Q 035721 121 FDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRG 200 (308)
Q Consensus 121 l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (308)
+++++.+ +++++||||||.+++.++.++|++|+++|++++.......... .......... ...+.........
T Consensus 109 l~~l~~~-----~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~ 181 (302)
T PRK00870 109 FEQLDLT-----DVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMP-DAFWAWRAFS-QYSPVLPVGRLVN 181 (302)
T ss_pred HHHcCCC-----CEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccch-HHHhhhhccc-ccCchhhHHHHhh
Confidence 9988765 9999999999999999999999999999999875322110000 0000000000 0000000000000
Q ss_pred CCCCcccccHHHHHHHhhCCCCCCCcchHHHHHH---------HHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHH
Q 035721 201 SLPMVSFKEEWKRKLALSSPRRPVARPRAATALE---------LLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEE 271 (308)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 271 (308)
......... .....+.................. ...........+.++++|+++|+|++|.+++... +.
T Consensus 182 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~ 259 (302)
T PRK00870 182 GGTVRDLSD-AVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AI 259 (302)
T ss_pred ccccccCCH-HHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HH
Confidence 000000000 001111000000000000000000 0001122334578899999999999999999766 77
Q ss_pred HHHHhcCCCCc---EEEecCCccccc-CCchhhHHHhhhcC
Q 035721 272 LYKRAASKDKT---LSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 272 ~~~~~~~~~~~---~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+.+.++ +++ +.+++++||+++ ++|+++++.+.++|
T Consensus 260 ~~~~~~--~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl 298 (302)
T PRK00870 260 LQKRIP--GAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFI 298 (302)
T ss_pred HHhhcc--cccccceeeecCCCccchhhChHHHHHHHHHHH
Confidence 888874 444 889999999999 99999999988764
No 11
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=9.7e-34 Score=223.37 Aligned_cols=256 Identities=13% Similarity=0.081 Sum_probs=163.6
Q ss_pred EcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHH
Q 035721 37 TNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVED 116 (308)
Q Consensus 37 ~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 116 (308)
.+.+|.+++|..++. +++|||+||++++.. .|+.+++.|.++ ++|+++|+||||.|+.+.. .++.+++++|
T Consensus 12 ~~~~g~~i~y~~~G~------g~~vvllHG~~~~~~-~w~~~~~~L~~~-~~via~D~~G~G~S~~~~~-~~~~~~~a~d 82 (295)
T PRK03592 12 VEVLGSRMAYIETGE------GDPIVFLHGNPTSSY-LWRNIIPHLAGL-GRCLAPDLIGMGASDKPDI-DYTFADHARY 82 (295)
T ss_pred EEECCEEEEEEEeCC------CCEEEEECCCCCCHH-HHHHHHHHHhhC-CEEEEEcCCCCCCCCCCCC-CCCHHHHHHH
Confidence 355888999988762 367999999998876 778999999887 6999999999999987654 3689999999
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhC-CCccc
Q 035721 117 AISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLV-PTWRV 195 (308)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 195 (308)
+.+++++++.+ +++++|||+||.+|+.++.++|++|+++|++++....................+.... .....
T Consensus 83 l~~ll~~l~~~-----~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (295)
T PRK03592 83 LDAWFDALGLD-----DVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMV 157 (295)
T ss_pred HHHHHHHhCCC-----CeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccc
Confidence 99999998776 9999999999999999999999999999999984332111000000111111111000 00000
Q ss_pred ccCC---CCCCCc----ccccHHHHHHHhhCCCCCCC-cchHHHH---------HHHHHHHHHhhhhcCCCCcceEEEee
Q 035721 196 VPTR---GSLPMV----SFKEEWKRKLALSSPRRPVA-RPRAATA---------LELLRVSRDLQGRFEEVEVPMLICHG 258 (308)
Q Consensus 196 ~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~---------~~~~~~~~~~~~~~~~i~~P~l~i~g 258 (308)
.... ...... .+.... ...+......... ....... ........+....+.++++|+++|+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 236 (295)
T PRK03592 158 LEENVFIERVLPGSILRPLSDEE-MAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINA 236 (295)
T ss_pred cchhhHHhhcccCcccccCCHHH-HHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEec
Confidence 0000 000000 011111 1111100000000 0000000 00001112234557889999999999
Q ss_pred CCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 259 GDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 259 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++|.++++....++..... +++++++++++||+++ ++|+++++.+.+++
T Consensus 237 ~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl 286 (295)
T PRK03592 237 EPGAILTTGAIRDWCRSWP-NQLEITVFGAGLHFAQEDSPEEIGAAIAAWL 286 (295)
T ss_pred cCCcccCcHHHHHHHHHhh-hhcceeeccCcchhhhhcCHHHHHHHHHHHH
Confidence 9999996655555544432 5789999999999999 99999999988764
No 12
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-33 Score=211.18 Aligned_cols=264 Identities=19% Similarity=0.147 Sum_probs=172.3
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc-cCCCc
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-HIPDL 110 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~ 110 (308)
-+..+.+.+|.+++|..-++++ .|+|+++||++.... .|+.....|+.+||+|+++|+||+|.|+.+.. ..|++
T Consensus 22 ~~hk~~~~~gI~~h~~e~g~~~----gP~illlHGfPe~wy-swr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~ 96 (322)
T KOG4178|consen 22 ISHKFVTYKGIRLHYVEGGPGD----GPIVLLLHGFPESWY-SWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTI 96 (322)
T ss_pred cceeeEEEccEEEEEEeecCCC----CCEEEEEccCCccch-hhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeH
Confidence 4456667788888887765544 799999999998766 67999999999999999999999999999877 67899
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCc----------h--
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPW----------P-- 178 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~----------~-- 178 (308)
..++.|+..++++++.+ +++++||+||+.+|+.+|..+|++|+++|+++...... ...+.. .
T Consensus 97 ~~l~~di~~lld~Lg~~-----k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p-~~~~~~~~~~~f~~~~y~~ 170 (322)
T KOG4178|consen 97 DELVGDIVALLDHLGLK-----KAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNP-KLKPLDSSKAIFGKSYYIC 170 (322)
T ss_pred HHHHHHHHHHHHHhccc-----eeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCc-ccchhhhhccccCccceeE
Confidence 99999999999999987 99999999999999999999999999999998766511 000000 0
Q ss_pred -------hhh-----hHHHhhhhCCCcccc-----cCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHH
Q 035721 179 -------LEH-----LLFTVAWLVPTWRVV-----PTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRD 241 (308)
Q Consensus 179 -------~~~-----~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (308)
... ....+...+...... +...... .........+.+........-...+.....+.+....
T Consensus 171 ~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a 249 (322)
T KOG4178|consen 171 LFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNEN-PLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEA 249 (322)
T ss_pred eccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCc-cchhhHHHHHHHHhccccccccccchhhHHHhhCchh
Confidence 000 000000000000000 0000000 0000011111111111100001111222222222111
Q ss_pred hhhhcCCCCcceEEEeeCCCcccChHHHH-HHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 242 LQGRFEEVEVPMLICHGGDDVVCDPACVE-ELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 242 ~~~~~~~i~~P~l~i~g~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
....+.++++|+++++|+.|.+.+..... .+.+.++. ..+.++++|+||+++ ++|+++++.++++|
T Consensus 250 ~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~-l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~ 317 (322)
T KOG4178|consen 250 APWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPR-LTERVVIEGIGHFVQQEKPQEVNQAILGFI 317 (322)
T ss_pred ccccccccccceEEEEecCcccccchhHHHHHHHhhcc-ccceEEecCCcccccccCHHHHHHHHHHHH
Confidence 23446788999999999999999877433 34444421 238899999999999 99999999998764
No 13
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=100.00 E-value=6.6e-33 Score=220.02 Aligned_cols=265 Identities=23% Similarity=0.341 Sum_probs=191.6
Q ss_pred EEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccch-HH------------------------HHHHHHHHHcCCeEE
Q 035721 36 ITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSW-IV------------------------QLTAVLFAKSGFATC 90 (308)
Q Consensus 36 ~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~-~~------------------------~~~~~~l~~~g~~v~ 90 (308)
+.+.||.+|++..|.+++ ++.+|+++||++.+... +. ..+++.|.++||.|+
T Consensus 2 ~~~~~g~~l~~~~~~~~~---~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~ 78 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKN---AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVY 78 (332)
T ss_pred ccCCCCCeEEEeeeeccC---CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEE
Confidence 456799999999998753 48899999999988762 11 357899999999999
Q ss_pred EecCCCCcCCCCc---cccCCCcchHHHHHHHHHHHHHHh------------------cCC-CCCEEEEEechhhHHHHH
Q 035721 91 AIDHQGHGFSDGL---VAHIPDLNPVVEDAISFFDSFRAR------------------HAP-DLPAFLYSESLGGAIALY 148 (308)
Q Consensus 91 ~~d~~G~G~s~~~---~~~~~~~~~~~~d~~~~l~~~~~~------------------~~~-~~~~~l~G~S~Gg~~a~~ 148 (308)
++|+||||.|.+. .....+++++++|+..+++.+... ... ..+++++||||||.+++.
T Consensus 79 ~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~ 158 (332)
T TIGR01607 79 GLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALR 158 (332)
T ss_pred EecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHH
Confidence 9999999999864 233347889999999999987651 002 568999999999999999
Q ss_pred HHHhcCC--------CccEEEEeCCcCCCCcCCCC-----CchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHH
Q 035721 149 ITLRQKG--------AWDGLILNGAMCGISQKFKP-----PWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKL 215 (308)
Q Consensus 149 ~a~~~p~--------~v~~~vl~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (308)
++.++++ .++++|+++|.......... ......+...+..+.+...... ......++...+.
T Consensus 159 ~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~-----~~~~~~~~~~~~~ 233 (332)
T TIGR01607 159 LLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISK-----KIRYEKSPYVNDI 233 (332)
T ss_pred HHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccC-----ccccccChhhhhH
Confidence 9876542 58999999987643211100 1112223333344444332211 1122344555666
Q ss_pred HhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCC--CcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCcccc
Q 035721 216 ALSSPRRPVARPRAATALELLRVSRDLQGRFEEV--EVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQL 293 (308)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 293 (308)
+..++.......+..+...+..........+..+ ++|+|+++|++|.+++++.++.+++.+..+++++.++++++|.+
T Consensus 234 ~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i 313 (332)
T TIGR01607 234 IKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVI 313 (332)
T ss_pred HhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCC
Confidence 7777777666667777777777665555556666 79999999999999999999999888765678999999999999
Q ss_pred c-CC-chhhHHHhhhcC
Q 035721 294 I-GE-PEENVELVFGEM 308 (308)
Q Consensus 294 ~-~~-~~~~~~~i~~~i 308 (308)
+ +. ++++.+.+.++|
T Consensus 314 ~~E~~~~~v~~~i~~wL 330 (332)
T TIGR01607 314 TIEPGNEEVLKKIIEWI 330 (332)
T ss_pred ccCCCHHHHHHHHHHHh
Confidence 9 53 577878777764
No 14
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=7.2e-34 Score=231.24 Aligned_cols=259 Identities=18% Similarity=0.160 Sum_probs=163.8
Q ss_pred EEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHH-HHHHHH---HcCCeEEEecCCCCcCCCCccccCCCcc
Q 035721 36 ITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQL-TAVLFA---KSGFATCAIDHQGHGFSDGLVAHIPDLN 111 (308)
Q Consensus 36 ~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~-~~~~l~---~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 111 (308)
+.+.+|.+++|...+|.++ +.+++|||+||++++.. +|.. +.+.|. +++|+|+++|+||||.|+.+....++++
T Consensus 180 ~~~~~~~~l~~~~~gp~~~-~~k~~VVLlHG~~~s~~-~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~ 257 (481)
T PLN03087 180 WLSSSNESLFVHVQQPKDN-KAKEDVLFIHGFISSSA-FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLR 257 (481)
T ss_pred eEeeCCeEEEEEEecCCCC-CCCCeEEEECCCCccHH-HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHH
Confidence 3345668999999888764 44689999999998877 5553 445555 3689999999999999987654456888
Q ss_pred hHHHHHH-HHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhC
Q 035721 112 PVVEDAI-SFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLV 190 (308)
Q Consensus 112 ~~~~d~~-~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (308)
++++++. .+++.++.. +++++||||||.+++.++.++|++|+++|++++......... ............ .
T Consensus 258 ~~a~~l~~~ll~~lg~~-----k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~--~~~~~~~~~~~~-~ 329 (481)
T PLN03087 258 EHLEMIERSVLERYKVK-----SFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGV--QATQYVMRKVAP-R 329 (481)
T ss_pred HHHHHHHHHHHHHcCCC-----CEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccch--hHHHHHHHHhcc-c
Confidence 8888884 777777655 999999999999999999999999999999998544321110 000000000000 0
Q ss_pred CCcccccCCCCCCCc------------ccccHHHHHH----HhhCCC---------CCCCcchHHHHHHHHHH----H-H
Q 035721 191 PTWRVVPTRGSLPMV------------SFKEEWKRKL----ALSSPR---------RPVARPRAATALELLRV----S-R 240 (308)
Q Consensus 191 ~~~~~~~~~~~~~~~------------~~~~~~~~~~----~~~~~~---------~~~~~~~~~~~~~~~~~----~-~ 240 (308)
..+...... ..... .......... ...... .............+... . .
T Consensus 330 ~~~~~~~~~-~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~ 408 (481)
T PLN03087 330 RVWPPIAFG-ASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDG 408 (481)
T ss_pred ccCCccccc-hhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhh
Confidence 000000000 00000 0000000000 000000 00000000011001100 0 1
Q ss_pred HhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc--CCchhhHHHhhhc
Q 035721 241 DLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI--GEPEENVELVFGE 307 (308)
Q Consensus 241 ~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~--~~~~~~~~~i~~~ 307 (308)
.......++++|+++++|++|.++|++..+.+++.+ +++++++++++||+++ ++|+++++.+.++
T Consensus 409 ~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i--P~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F 475 (481)
T PLN03087 409 YLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV--PRARVKVIDDKDHITIVVGRQKEFARELEEI 475 (481)
T ss_pred HHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC--CCCEEEEeCCCCCcchhhcCHHHHHHHHHHH
Confidence 112233468999999999999999999999999999 7899999999999977 7899999988765
No 15
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.5e-33 Score=226.71 Aligned_cols=257 Identities=16% Similarity=0.199 Sum_probs=161.6
Q ss_pred CCc-EEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHH
Q 035721 40 RGL-RLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAI 118 (308)
Q Consensus 40 ~g~-~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 118 (308)
+|. +++|...++.+..+..|+|||+||++++.. .|..+++.|.+ +|+|+++|+||||.|+.+....++++++++++.
T Consensus 69 ~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~-~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~ 146 (360)
T PLN02679 69 KGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIP-HWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELIL 146 (360)
T ss_pred CCceeEEEEEecCcccCCCCCeEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHH
Confidence 455 999988776422224578999999998876 67888999976 699999999999999876544568899999999
Q ss_pred HHHHHHHHhcCCCCCEEEEEechhhHHHHHHHH-hcCCCccEEEEeCCcCCCCcCCCC-Cchhhh---hHHHhhhhCCC-
Q 035721 119 SFFDSFRARHAPDLPAFLYSESLGGAIALYITL-RQKGAWDGLILNGAMCGISQKFKP-PWPLEH---LLFTVAWLVPT- 192 (308)
Q Consensus 119 ~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~-~~p~~v~~~vl~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~- 192 (308)
++++.+..+ +++++||||||.+++.++. .+|++|+++|++++.......... ...... ...........
T Consensus 147 ~~l~~l~~~-----~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (360)
T PLN02679 147 DFLEEVVQK-----PTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQR 221 (360)
T ss_pred HHHHHhcCC-----CeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhch
Confidence 999988766 9999999999999998887 479999999999986433211100 000000 00000000000
Q ss_pred -cc---cccC--C--------CCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHH--HHHhhhhcCCCCcceEEE
Q 035721 193 -WR---VVPT--R--------GSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRV--SRDLQGRFEEVEVPMLIC 256 (308)
Q Consensus 193 -~~---~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~l~i 256 (308)
.. .... . ..+................ . ................ ..+....+.++++|+|++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii 298 (360)
T PLN02679 222 GIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRG-P--ADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVL 298 (360)
T ss_pred hhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHh-h--ccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEE
Confidence 00 0000 0 0000000000111111100 0 0000111111111110 011234567899999999
Q ss_pred eeCCCcccChHH-----HHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 257 HGGDDVVCDPAC-----VEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 257 ~g~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+|++|.++|++. .+.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 299 ~G~~D~~~p~~~~~~~~~~~l~~~i--p~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL 354 (360)
T PLN02679 299 WGDQDPFTPLDGPVGKYFSSLPSQL--PNVTLYVLEGVGHCPHDDRPDLVHEKLLPWL 354 (360)
T ss_pred EeCCCCCcCchhhHHHHHHhhhccC--CceEEEEcCCCCCCccccCHHHHHHHHHHHH
Confidence 999999998763 23344445 6799999999999999 99999999988764
No 16
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=4.4e-34 Score=220.33 Aligned_cols=233 Identities=13% Similarity=0.110 Sum_probs=152.4
Q ss_pred eEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEe
Q 035721 60 VLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSE 139 (308)
Q Consensus 60 ~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~ 139 (308)
+|||+||++.+.. .|+.+++.|.+.||+|+++|+||||.|+......++++++++|+.++++.+... .+++++||
T Consensus 5 ~vvllHG~~~~~~-~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~----~~~~lvGh 79 (255)
T PLN02965 5 HFVFVHGASHGAW-CWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPD----HKVILVGH 79 (255)
T ss_pred EEEEECCCCCCcC-cHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCC----CCEEEEec
Confidence 5999999998776 778999999888899999999999999865444468899999999999987541 29999999
Q ss_pred chhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCccc--ccC-CCCCCCcccccHHHHHHH
Q 035721 140 SLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRV--VPT-RGSLPMVSFKEEWKRKLA 216 (308)
Q Consensus 140 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~ 216 (308)
||||.+++.++.++|++|+++|++++......... ..............+.. ... ..................
T Consensus 80 SmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (255)
T PLN02965 80 SIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSII----SPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYY 155 (255)
T ss_pred CcchHHHHHHHHhCchheeEEEEEccccCCCCCCc----cHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHH
Confidence 99999999999999999999999998532111100 00000000000000000 000 000000000000000000
Q ss_pred hhCCC--------CCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecC
Q 035721 217 LSSPR--------RPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPG 288 (308)
Q Consensus 217 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (308)
..... ........... ....+....+..+++|+++++|++|.++|++..+.+.+.+ ++++++++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~--~~a~~~~i~~ 229 (255)
T PLN02965 156 YNQSPLEDYTLSSKLLRPAPVRAF----QDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENW--PPAQTYVLED 229 (255)
T ss_pred hcCCCHHHHHHHHHhcCCCCCcch----hhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhC--CcceEEEecC
Confidence 00000 00000000000 0001222345578999999999999999999999999998 6789999999
Q ss_pred Cccccc-CCchhhHHHhhhc
Q 035721 289 MWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 289 ~gH~~~-~~~~~~~~~i~~~ 307 (308)
+||+++ ++|+++++.|.++
T Consensus 230 ~GH~~~~e~p~~v~~~l~~~ 249 (255)
T PLN02965 230 SDHSAFFSVPTTLFQYLLQA 249 (255)
T ss_pred CCCchhhcCHHHHHHHHHHH
Confidence 999999 9999999988765
No 17
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=3.8e-33 Score=215.89 Aligned_cols=248 Identities=14% Similarity=0.130 Sum_probs=161.2
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHH
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~ 122 (308)
++.|...++.+. ..+|+|||+||++++.. .|..++..|.+ +|+|+++|+||||.|..... ++++++++|+.++++
T Consensus 2 ~~~~~~~~~~~~-~~~~~iv~lhG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~--~~~~~~~~d~~~~l~ 76 (255)
T PRK10673 2 KLNIRAQTAQNP-HNNSPIVLVHGLFGSLD-NLGVLARDLVN-DHDIIQVDMRNHGLSPRDPV--MNYPAMAQDLLDTLD 76 (255)
T ss_pred cceeeeccCCCC-CCCCCEEEECCCCCchh-HHHHHHHHHhh-CCeEEEECCCCCCCCCCCCC--CCHHHHHHHHHHHHH
Confidence 355666555433 56899999999998877 66888999976 59999999999999987544 588999999999999
Q ss_pred HHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCC--C
Q 035721 123 SFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTR--G 200 (308)
Q Consensus 123 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 200 (308)
.+..+ +++++||||||.+++.++.++|++|+++|++++.+..... .. ............... ..... .
T Consensus 77 ~l~~~-----~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~---~~-~~~~~~~~~~~~~~~-~~~~~~~~ 146 (255)
T PRK10673 77 ALQIE-----KATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHV---RR-HDEIFAAINAVSEAG-ATTRQQAA 146 (255)
T ss_pred HcCCC-----ceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccc---hh-hHHHHHHHHHhhhcc-cccHHHHH
Confidence 88665 8999999999999999999999999999999764322110 00 001111111000000 00000 0
Q ss_pred CCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCC
Q 035721 201 SLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKD 280 (308)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 280 (308)
...................................... ....+.++++++|+++|+|++|..++.+..+.+.+.+ ++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~ 223 (255)
T PRK10673 147 AIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPH-IVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQF--PQ 223 (255)
T ss_pred HHHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHH-HhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhC--CC
Confidence 00000000111111111111000000011111111111 1112346778999999999999999999999998888 68
Q ss_pred CcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 281 KTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 281 ~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+++.+++++||+++ ++|+++++.+.++|
T Consensus 224 ~~~~~~~~~gH~~~~~~p~~~~~~l~~fl 252 (255)
T PRK10673 224 ARAHVIAGAGHWVHAEKPDAVLRAIRRYL 252 (255)
T ss_pred cEEEEeCCCCCeeeccCHHHHHHHHHHHH
Confidence 99999999999999 99999999988764
No 18
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=1.8e-32 Score=214.96 Aligned_cols=257 Identities=16% Similarity=0.126 Sum_probs=166.7
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
.+.+.+|.+++|...++.+ .++|||+||++++.. .|..+.+.|.+ +|+|+++|+||||.|+.+....+++++++
T Consensus 9 ~~~~~~~~~~~~~~~g~~~----~~~vv~~hG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 82 (278)
T TIGR03056 9 RRVTVGPFHWHVQDMGPTA----GPLLLLLHGTGASTH-SWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMA 82 (278)
T ss_pred ceeeECCEEEEEEecCCCC----CCeEEEEcCCCCCHH-HHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHH
Confidence 3446688899998765432 578999999998877 66888999976 59999999999999987665456899999
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhh--hhCCC
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVA--WLVPT 192 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 192 (308)
+|+.++++.+..+ +++++||||||.+++.++.++|++++++|++++........... .......... .....
T Consensus 83 ~~l~~~i~~~~~~-----~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 156 (278)
T TIGR03056 83 EDLSALCAAEGLS-----PDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGT-LFPYMARVLACNPFTPP 156 (278)
T ss_pred HHHHHHHHHcCCC-----CceEEEECccHHHHHHHHHhCCcccceEEEEcCccccccccccc-ccchhhHhhhhcccchH
Confidence 9999999877655 89999999999999999999999999999998754322111100 0000000000 00000
Q ss_pred cccc-cCCCCCCCcccc------cHHHHHHHhhCCCCCCCcchHHHHHHHHHH--HHHhhhhcCCCCcceEEEeeCCCcc
Q 035721 193 WRVV-PTRGSLPMVSFK------EEWKRKLALSSPRRPVARPRAATALELLRV--SRDLQGRFEEVEVPMLICHGGDDVV 263 (308)
Q Consensus 193 ~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~l~i~g~~D~~ 263 (308)
.... ............ +......+.... ............... .......++++++|+++++|++|.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~ 233 (278)
T TIGR03056 157 MMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLI---RSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKA 233 (278)
T ss_pred HHHhhcccCcchhHHhhccccccccchhhHHHHhh---cCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcc
Confidence 0000 000000000000 000000000000 000000001111100 0112345678899999999999999
Q ss_pred cChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 264 CDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+|++..+.+.+.+ ++++++.++++||+++ ++|+++++.|.+++
T Consensus 234 vp~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~ 277 (278)
T TIGR03056 234 VPPDESKRAATRV--PTATLHVVPGGGHLVHEEQADGVVGLILQAA 277 (278)
T ss_pred cCHHHHHHHHHhc--cCCeEEEECCCCCcccccCHHHHHHHHHHHh
Confidence 9999999998887 6789999999999999 99999999998764
No 19
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=6.2e-33 Score=214.47 Aligned_cols=242 Identities=19% Similarity=0.159 Sum_probs=149.7
Q ss_pred EEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHH
Q 035721 44 LFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDS 123 (308)
Q Consensus 44 l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 123 (308)
++|..+|. + .|+|||+||+++++. .|+.+.+.|.++ |+|+++|+||||.|.... .++++++++++.+
T Consensus 4 ~~y~~~G~--g---~~~ivllHG~~~~~~-~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~l~~---- 70 (256)
T PRK10349 4 IWWQTKGQ--G---NVHLVLLHGWGLNAE-VWRCIDEELSSH-FTLHLVDLPGFGRSRGFG--ALSLADMAEAVLQ---- 70 (256)
T ss_pred cchhhcCC--C---CCeEEEECCCCCChh-HHHHHHHHHhcC-CEEEEecCCCCCCCCCCC--CCCHHHHHHHHHh----
Confidence 55665542 1 346999999998887 778999999765 999999999999997543 2456555555442
Q ss_pred HHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh-hhhCCCcc--c-ccC-
Q 035721 124 FRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV-AWLVPTWR--V-VPT- 198 (308)
Q Consensus 124 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~-~~~- 198 (308)
+.. ++++++||||||.+++.+|.++|++|+++|++++..................... ........ . ...
T Consensus 71 ~~~-----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (256)
T PRK10349 71 QAP-----DKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLA 145 (256)
T ss_pred cCC-----CCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHH
Confidence 222 3999999999999999999999999999999988544321111011100111000 00000000 0 000
Q ss_pred CCCCCCcccccHHHHHHHhhCCCCCC-CcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhc
Q 035721 199 RGSLPMVSFKEEWKRKLALSSPRRPV-ARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAA 277 (308)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 277 (308)
.......... ............... ............. ..+..+.+.++++|+++++|++|.++|.+.++.+.+.+
T Consensus 146 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i- 222 (256)
T PRK10349 146 LQTMGTETAR-QDARALKKTVLALPMPEVDVLNGGLEILK-TVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW- 222 (256)
T ss_pred HHHccCchHH-HHHHHHHHHhhccCCCcHHHHHHHHHHHH-hCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhC-
Confidence 0000000000 000000000000000 0001111111111 12445667889999999999999999999988888888
Q ss_pred CCCCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 278 SKDKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 278 ~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
+++++++++++||+++ ++|+++++.+.++
T Consensus 223 -~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~ 252 (256)
T PRK10349 223 -PHSESYIFAKAAHAPFISHPAEFCHLLVAL 252 (256)
T ss_pred -CCCeEEEeCCCCCCccccCHHHHHHHHHHH
Confidence 6899999999999999 9999999988764
No 20
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=8e-33 Score=216.18 Aligned_cols=255 Identities=13% Similarity=0.098 Sum_probs=159.3
Q ss_pred ccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCC
Q 035721 29 VSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIP 108 (308)
Q Consensus 29 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 108 (308)
+++...++ ..+|.+++|...+. +++|||+||++.+.. .|+.+.+.|.+ +|+|+++|+||||.|+.+....+
T Consensus 12 ~~~~~~~~-~~~~~~i~y~~~G~------~~~iv~lHG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~ 82 (286)
T PRK03204 12 YPFESRWF-DSSRGRIHYIDEGT------GPPILLCHGNPTWSF-LYRDIIVALRD-RFRCVAPDYLGFGLSERPSGFGY 82 (286)
T ss_pred ccccceEE-EcCCcEEEEEECCC------CCEEEEECCCCccHH-HHHHHHHHHhC-CcEEEEECCCCCCCCCCCCcccc
Confidence 33444455 45777999987652 467999999987655 67888899876 59999999999999987654446
Q ss_pred CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhh-
Q 035721 109 DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVA- 187 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~- 187 (308)
+.+++++++.++++++... +++++||||||.+++.++..+|++|+++|++++....... ...........
T Consensus 83 ~~~~~~~~~~~~~~~~~~~-----~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~----~~~~~~~~~~~~ 153 (286)
T PRK03204 83 QIDEHARVIGEFVDHLGLD-----RYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADT----LAMKAFSRVMSS 153 (286)
T ss_pred CHHHHHHHHHHHHHHhCCC-----CEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCc----hhHHHHHHHhcc
Confidence 7888899999998887655 8999999999999999999999999999998775321100 00000000000
Q ss_pred -----hhCCCccc-ccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHH-H---H-HH---HHHhhhhcCC--CCc
Q 035721 188 -----WLVPTWRV-VPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALE-L---L-RV---SRDLQGRFEE--VEV 251 (308)
Q Consensus 188 -----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~-~~---~~~~~~~~~~--i~~ 251 (308)
........ ............ .......+. . ............ . . .. ..+....+.+ +++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T PRK03204 154 PPVQYAILRRNFFVERLIPAGTEHRP-SSAVMAHYR-A---VQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTK 228 (286)
T ss_pred ccchhhhhhhhHHHHHhccccccCCC-CHHHHHHhc-C---CCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCC
Confidence 00000000 000000000000 000111110 0 000001111000 0 0 00 0111111111 289
Q ss_pred ceEEEeeCCCcccChH-HHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 252 PMLICHGGDDVVCDPA-CVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 252 P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
|+++|+|++|.++++. ..+.+.+.+ +++++++++++||+++ ++|+++++.|.+++
T Consensus 229 PtliI~G~~D~~~~~~~~~~~~~~~i--p~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 229 PTLLVWGMKDVAFRPKTILPRLRATF--PDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred CeEEEecCCCcccCcHHHHHHHHHhc--CCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 9999999999988655 467788888 6899999999999999 99999999998774
No 21
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=1.6e-32 Score=212.80 Aligned_cols=251 Identities=16% Similarity=0.181 Sum_probs=161.9
Q ss_pred EEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHH
Q 035721 44 LFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDS 123 (308)
Q Consensus 44 l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 123 (308)
++|..+++.. ..+|+|||+||++++.. +|..+++.|.+ +|+|+++|+||||.|.......++++++++++.++++.
T Consensus 1 ~~~~~~~~~~--~~~~~iv~lhG~~~~~~-~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~ 76 (257)
T TIGR03611 1 MHYELHGPPD--ADAPVVVLSSGLGGSGS-YWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDA 76 (257)
T ss_pred CEEEEecCCC--CCCCEEEEEcCCCcchh-HHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHH
Confidence 3567776533 34789999999998887 66788888865 69999999999999987655556889999999999988
Q ss_pred HHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCC
Q 035721 124 FRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLP 203 (308)
Q Consensus 124 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (308)
++.. +++++||||||.+++.++.++|++++++|++++......... .........+.................
T Consensus 77 ~~~~-----~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (257)
T TIGR03611 77 LNIE-----RFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTR--RCFDVRIALLQHAGPEAYVHAQALFLY 149 (257)
T ss_pred hCCC-----cEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHH--HHHHHHHHHHhccCcchhhhhhhhhhc
Confidence 7665 899999999999999999999999999999987544321100 000000001100000000000000000
Q ss_pred Cccccc---HHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCC
Q 035721 204 MVSFKE---EWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKD 280 (308)
Q Consensus 204 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 280 (308)
...+.. ............................ ..+....+.++++|+++++|++|.++|++.++.+.+.+ ++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~ 226 (257)
T TIGR03611 150 PADWISENAARLAADEAHALAHFPGKANVLRRINALE-AFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAAL--PN 226 (257)
T ss_pred cccHhhccchhhhhhhhhcccccCccHHHHHHHHHHH-cCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhc--CC
Confidence 000000 0000000000000000001100000000 12233557788999999999999999999999999888 67
Q ss_pred CcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 281 KTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 281 ~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++++.++++||+++ ++|+++++.+.++|
T Consensus 227 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 255 (257)
T TIGR03611 227 AQLKLLPYGGHASNVTDPETFNRALLDFL 255 (257)
T ss_pred ceEEEECCCCCCccccCHHHHHHHHHHHh
Confidence 89999999999999 99999999988764
No 22
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=9.4e-32 Score=215.05 Aligned_cols=266 Identities=15% Similarity=0.105 Sum_probs=169.7
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc--
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-- 105 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-- 105 (308)
++++........+|.+++|...++.+ +++|||+||++++.. .|+.+++.|.+ +|+|+++|+||||.|+.+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~y~~~G~~~----~~~ivllHG~~~~~~-~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~ 174 (383)
T PLN03084 101 GLKMGAQSQASSDLFRWFCVESGSNN----NPPVLLIHGFPSQAY-SYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGY 174 (383)
T ss_pred cccccceeEEcCCceEEEEEecCCCC----CCeEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccc
Confidence 44445555667889999998876532 578999999998876 67889999976 69999999999999987643
Q ss_pred -cCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHH
Q 035721 106 -HIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLF 184 (308)
Q Consensus 106 -~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 184 (308)
..++++++++++.++++.+..+ +++++|||+||.+++.++.++|++|+++|++++.........+ .....+..
T Consensus 175 ~~~ys~~~~a~~l~~~i~~l~~~-----~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p-~~l~~~~~ 248 (383)
T PLN03084 175 GFNYTLDEYVSSLESLIDELKSD-----KVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLP-STLSEFSN 248 (383)
T ss_pred cccCCHHHHHHHHHHHHHHhCCC-----CceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccch-HHHHHHHH
Confidence 2468999999999999998876 9999999999999999999999999999999986432110001 00100000
Q ss_pred H-hhhhCCCcccccCCCCCC--CcccccHHHHHHHhhCCCCCCC-cchHHHHHHHHHH-----HHHhhhhc--CCCCcce
Q 035721 185 T-VAWLVPTWRVVPTRGSLP--MVSFKEEWKRKLALSSPRRPVA-RPRAATALELLRV-----SRDLQGRF--EEVEVPM 253 (308)
Q Consensus 185 ~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~--~~i~~P~ 253 (308)
. ................+. ............+......... ............. ..+....+ .++++|+
T Consensus 249 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPv 328 (383)
T PLN03084 249 FLLGEIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPI 328 (383)
T ss_pred HHhhhhhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCE
Confidence 0 000000000000000000 0000001111111111000000 0001111111100 00111111 3679999
Q ss_pred EEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 254 LICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 254 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++++|++|.+++.+.++.+++.. +.++.+++++||+++ ++|+++++.|.+++
T Consensus 329 LiI~G~~D~~v~~~~~~~~a~~~---~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl 381 (383)
T PLN03084 329 TVCWGLRDRWLNYDGVEDFCKSS---QHKLIELPMAGHHVQEDCGEELGGIISGIL 381 (383)
T ss_pred EEEeeCCCCCcCHHHHHHHHHhc---CCeEEEECCCCCCcchhCHHHHHHHHHHHh
Confidence 99999999999998888887763 689999999999999 99999999998764
No 23
>PLN02578 hydrolase
Probab=100.00 E-value=1.2e-31 Score=215.60 Aligned_cols=254 Identities=17% Similarity=0.160 Sum_probs=164.6
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
.+.+.+|.+++|...++ +++|||+||++++.. .|..+.+.|.+ +|+|+++|+||||.|+++... ++.+.++
T Consensus 69 ~~~~~~~~~i~Y~~~g~------g~~vvliHG~~~~~~-~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~-~~~~~~a 139 (354)
T PLN02578 69 NFWTWRGHKIHYVVQGE------GLPIVLIHGFGASAF-HWRYNIPELAK-KYKVYALDLLGFGWSDKALIE-YDAMVWR 139 (354)
T ss_pred eEEEECCEEEEEEEcCC------CCeEEEECCCCCCHH-HHHHHHHHHhc-CCEEEEECCCCCCCCCCcccc-cCHHHHH
Confidence 33355688899877542 356999999998866 67888888976 599999999999999876543 6888889
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCC--------chhhh-hHHH
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPP--------WPLEH-LLFT 185 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~--------~~~~~-~~~~ 185 (308)
+++.++++.+..+ +++++|||+||.+++.+|.++|++|+++|++++........... ..... ....
T Consensus 140 ~~l~~~i~~~~~~-----~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (354)
T PLN02578 140 DQVADFVKEVVKE-----PAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKP 214 (354)
T ss_pred HHHHHHHHHhccC-----CeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHH
Confidence 9999999988766 99999999999999999999999999999998764432211100 00000 0000
Q ss_pred h----hhhCCCcccccCC----------CCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHH------HHHhhhh
Q 035721 186 V----AWLVPTWRVVPTR----------GSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRV------SRDLQGR 245 (308)
Q Consensus 186 ~----~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 245 (308)
. ............. ..+......+........... ............... ..+..+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (354)
T PLN02578 215 LKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPA---ADPNAGEVYYRLMSRFLFNQSRYTLDSL 291 (354)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcc---cCCchHHHHHHHHHHHhcCCCCCCHHHH
Confidence 0 0000000000000 000000000011111110000 000111111111111 0123345
Q ss_pred cCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 246 FEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 246 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+.++++|+++|+|++|.+++.+.++.+.+.+ ++.+++++ ++||+++ ++|+++++.|.+++
T Consensus 292 l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~--p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl 352 (354)
T PLN02578 292 LSKLSCPLLLLWGDLDPWVGPAKAEKIKAFY--PDTTLVNL-QAGHCPHDEVPEQVNKALLEWL 352 (354)
T ss_pred hhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCEEEEe-CCCCCccccCHHHHHHHHHHHH
Confidence 7889999999999999999999999999888 67899999 5999999 99999999998864
No 24
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=5e-32 Score=212.69 Aligned_cols=250 Identities=19% Similarity=0.116 Sum_probs=152.9
Q ss_pred CcEEEEEEecCCCCCCCcceEEEEccCCCccchHHH---HHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHH
Q 035721 41 GLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQ---LTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDA 117 (308)
Q Consensus 41 g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~---~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 117 (308)
|.+++|...+ ..|+|||+||++++.. .|. .....|.+.||+|+++|+||||.|+............++|+
T Consensus 19 ~~~~~y~~~g------~~~~ivllHG~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l 91 (282)
T TIGR03343 19 NFRIHYNEAG------NGEAVIMLHGGGPGAG-GWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAV 91 (282)
T ss_pred ceeEEEEecC------CCCeEEEECCCCCchh-hHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHH
Confidence 4567777543 1467999999987765 333 23455667789999999999999986532211222467889
Q ss_pred HHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCccc--
Q 035721 118 ISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRV-- 195 (308)
Q Consensus 118 ~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 195 (308)
.++++.+..+ +++++||||||.+++.++.++|++++++|++++.......... ...... ............
T Consensus 92 ~~~l~~l~~~-----~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~ 164 (282)
T TIGR03343 92 KGLMDALDIE-----KAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAP-MPMEGI-KLLFKLYAEPSYET 164 (282)
T ss_pred HHHHHHcCCC-----CeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCcccccc-CchHHH-HHHHHHhcCCCHHH
Confidence 9998888766 9999999999999999999999999999999875321110000 000000 000000000000
Q ss_pred --ccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHH----HHHHHhhhhcCCCCcceEEEeeCCCcccChHHH
Q 035721 196 --VPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELL----RVSRDLQGRFEEVEVPMLICHGGDDVVCDPACV 269 (308)
Q Consensus 196 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~ 269 (308)
........................... ............ ....+....++++++|+++++|++|.+++++.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~ 242 (282)
T TIGR03343 165 LKQMLNVFLFDQSLITEELLQGRWENIQR--QPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHG 242 (282)
T ss_pred HHHHHhhCccCcccCcHHHHHhHHHHhhc--CHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhH
Confidence 000000000000000000000000000 000000000000 001223345778999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 270 EELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+.+++.+ +++++++++++||+++ ++|+++.+.|.+++
T Consensus 243 ~~~~~~~--~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl 280 (282)
T TIGR03343 243 LKLLWNM--PDAQLHVFSRCGHWAQWEHADAFNRLVIDFL 280 (282)
T ss_pred HHHHHhC--CCCEEEEeCCCCcCCcccCHHHHHHHHHHHh
Confidence 9999988 6899999999999999 99999999988764
No 25
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-31 Score=215.68 Aligned_cols=258 Identities=18% Similarity=0.157 Sum_probs=157.3
Q ss_pred cCCCcEEEEEEecCCCC---CCCcceEEEEccCCCccchHH-HHHHHHH-------HHcCCeEEEecCCCCcCCCCcccc
Q 035721 38 NSRGLRLFTQWWTPLPP---AKTLGVLCVVHGFTGESSWIV-QLTAVLF-------AKSGFATCAIDHQGHGFSDGLVAH 106 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~---~~~~~~vv~~hG~~~~~~~~~-~~~~~~l-------~~~g~~v~~~d~~G~G~s~~~~~~ 106 (308)
+.+|.+++|..+++.+. .+..|+|||+||++++...|+ ..+.+.| ..++|+|+++|+||||.|+.+...
T Consensus 46 ~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 46 TLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred CcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC
Confidence 46788999998875320 011578999999998876343 2455444 135699999999999999865331
Q ss_pred ------CCCcchHHHHHHHHH-HHHHHhcCCCCCEE-EEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCch
Q 035721 107 ------IPDLNPVVEDAISFF-DSFRARHAPDLPAF-LYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWP 178 (308)
Q Consensus 107 ------~~~~~~~~~d~~~~l-~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~ 178 (308)
.++++++++++.+++ ++++.+ +++ ++||||||.+|+.++.++|++|+++|++++....... ....
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi~-----~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~--~~~~ 198 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGVK-----HLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSG--RNWM 198 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCCC-----ceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccH--HHHH
Confidence 357788888887754 666655 775 8999999999999999999999999999875321110 0000
Q ss_pred hhhh-HHHhhhhCCCcccccCCCCCCCccc----------------------ccHH-HHHHHhhCCCCCCCcchHHHHHH
Q 035721 179 LEHL-LFTVAWLVPTWRVVPTRGSLPMVSF----------------------KEEW-KRKLALSSPRRPVARPRAATALE 234 (308)
Q Consensus 179 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 234 (308)
.... ....... ..+.... . ....... .... ............. .........
T Consensus 199 ~~~~~~~~~~~~-~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 274 (360)
T PRK06489 199 WRRMLIESIRND-PAWNNGN-Y-TTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPV-TADANDFLY 274 (360)
T ss_pred HHHHHHHHHHhC-CCCCCCC-C-CCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhh-hcCHHHHHH
Confidence 0000 0001000 0000000 0 0000000 0000 0000000000000 000111111
Q ss_pred HHHH--HHHhhhhcCCCCcceEEEeeCCCcccChHHH--HHHHHHhcCCCCcEEEecCC----cccccCCchhhHHHhhh
Q 035721 235 LLRV--SRDLQGRFEEVEVPMLICHGGDDVVCDPACV--EELYKRAASKDKTLSIYPGM----WHQLIGEPEENVELVFG 306 (308)
Q Consensus 235 ~~~~--~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~i~~ 306 (308)
.... ..+..+.+.+|++|+|+|+|++|.++|++.+ +.+.+.+ +++++++++++ ||.++++|+++++.|.+
T Consensus 275 ~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~i--p~a~l~~i~~a~~~~GH~~~e~P~~~~~~i~~ 352 (360)
T PRK06489 275 QWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRV--KHGRLVLIPASPETRGHGTTGSAKFWKAYLAE 352 (360)
T ss_pred HHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhC--cCCeEEEECCCCCCCCcccccCHHHHHHHHHH
Confidence 1111 1234556889999999999999999998875 7788888 68999999996 99988999999998887
Q ss_pred cC
Q 035721 307 EM 308 (308)
Q Consensus 307 ~i 308 (308)
++
T Consensus 353 FL 354 (360)
T PRK06489 353 FL 354 (360)
T ss_pred HH
Confidence 64
No 26
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.98 E-value=5.3e-31 Score=207.72 Aligned_cols=254 Identities=17% Similarity=0.176 Sum_probs=159.3
Q ss_pred EcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc--CCCcchHH
Q 035721 37 TNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH--IPDLNPVV 114 (308)
Q Consensus 37 ~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~--~~~~~~~~ 114 (308)
.+.+|..+.|...++.+ .+++|||+||++++...+|..+...+.+.||+|+++|+||+|.|..+... .+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~---~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~ 83 (288)
T TIGR01250 7 ITVDGGYHLFTKTGGEG---EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFV 83 (288)
T ss_pred ecCCCCeEEEEeccCCC---CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHH
Confidence 45566677787765432 26789999998776665777777777766999999999999999865433 25788999
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCc-
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTW- 193 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 193 (308)
+|+.++++.++.+ +++++|||+||.+++.++.++|++++++|++++....... ..........+....
T Consensus 84 ~~~~~~~~~~~~~-----~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~------~~~~~~~~~~~~~~~~ 152 (288)
T TIGR01250 84 DELEEVREKLGLD-----KFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEY------VKELNRLRKELPPEVR 152 (288)
T ss_pred HHHHHHHHHcCCC-----cEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHH------HHHHHHHHhhcChhHH
Confidence 9999998887665 8999999999999999999999999999999875432110 000000000000000
Q ss_pred ---ccccCCCCCCCcccccHHHHHHHhhCCCC-CCCcchHHHH--------HHH-----------HHHHHHhhhhcCCCC
Q 035721 194 ---RVVPTRGSLPMVSFKEEWKRKLALSSPRR-PVARPRAATA--------LEL-----------LRVSRDLQGRFEEVE 250 (308)
Q Consensus 194 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--------~~~-----------~~~~~~~~~~~~~i~ 250 (308)
........+....... ............ .......... ... .....+....+.+++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 231 (288)
T TIGR01250 153 AAIKRCEASGDYDNPEYQE-AVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIK 231 (288)
T ss_pred HHHHHHHhccCcchHHHHH-HHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccC
Confidence 0000000000000000 000000000000 0000000000 000 000012334567889
Q ss_pred cceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 251 VPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 251 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+|+++++|++|.+ +++..+.+.+.+ +++++++++++||+++ ++|+++.+.|.+++
T Consensus 232 ~P~lii~G~~D~~-~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 287 (288)
T TIGR01250 232 VPTLLTVGEFDTM-TPEAAREMQELI--AGSRLVVFPDGSHMTMIEDPEVYFKLLSDFI 287 (288)
T ss_pred CCEEEEecCCCcc-CHHHHHHHHHhc--cCCeEEEeCCCCCCcccCCHHHHHHHHHHHh
Confidence 9999999999985 667888888877 6789999999999999 99999999998764
No 27
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.97 E-value=7.1e-31 Score=184.13 Aligned_cols=224 Identities=19% Similarity=0.186 Sum_probs=167.8
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
+.+|+|+||+.|+.. ..+.+.+.|.++||.|+++.+||||......-. .+.++|.+|+.+..+++... ....|.++
T Consensus 15 ~~AVLllHGFTGt~~-Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~-t~~~DW~~~v~d~Y~~L~~~--gy~eI~v~ 90 (243)
T COG1647 15 NRAVLLLHGFTGTPR-DVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLK-TTPRDWWEDVEDGYRDLKEA--GYDEIAVV 90 (243)
T ss_pred CEEEEEEeccCCCcH-HHHHHHHHHHHCCceEecCCCCCCCCCHHHHhc-CCHHHHHHHHHHHHHHHHHc--CCCeEEEE
Confidence 467999999999998 558999999999999999999999987643333 48899999999999999976 77899999
Q ss_pred EechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccH-HHHHHH
Q 035721 138 SESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEE-WKRKLA 216 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 216 (308)
|.||||.+++.+|..+| ++++|.++++....... .....++.+.... .+..-.+. .....+
T Consensus 91 GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~---~iie~~l~y~~~~-------------kk~e~k~~e~~~~e~ 152 (243)
T COG1647 91 GLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWR---IIIEGLLEYFRNA-------------KKYEGKDQEQIDKEM 152 (243)
T ss_pred eecchhHHHHHHHhhCC--ccceeeecCCcccccch---hhhHHHHHHHHHh-------------hhccCCCHHHHHHHH
Confidence 99999999999999998 89999999876643221 1122222222110 00000111 111111
Q ss_pred hhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc--
Q 035721 217 LSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-- 294 (308)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-- 294 (308)
... ..........+.....+....+..|..|+++++|++|+.+|.+.+..+++.+...+.++.+++++||.+.
T Consensus 153 ~~~-----~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D 227 (243)
T COG1647 153 KSY-----KDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLD 227 (243)
T ss_pred HHh-----hcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecc
Confidence 111 1112334445555556777888999999999999999999999999999999877899999999999998
Q ss_pred CCchhhHHHhhhcC
Q 035721 295 GEPEENVELVFGEM 308 (308)
Q Consensus 295 ~~~~~~~~~i~~~i 308 (308)
.+.+.+.+.|+.++
T Consensus 228 ~Erd~v~e~V~~FL 241 (243)
T COG1647 228 KERDQVEEDVITFL 241 (243)
T ss_pred hhHHHHHHHHHHHh
Confidence 67788888887764
No 28
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=4.2e-30 Score=193.22 Aligned_cols=271 Identities=20% Similarity=0.178 Sum_probs=160.9
Q ss_pred cccccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc
Q 035721 26 RHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA 105 (308)
Q Consensus 26 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 105 (308)
...+++...+....++..+......+.. ..+.++|++||+|.+...|+ .-.+.|++ .++|+++|++|+|.|+.+.-
T Consensus 60 ~~~v~~~~~~v~i~~~~~iw~~~~~~~~--~~~~plVliHGyGAg~g~f~-~Nf~~La~-~~~vyaiDllG~G~SSRP~F 135 (365)
T KOG4409|consen 60 SVPVPYSKKYVRIPNGIEIWTITVSNES--ANKTPLVLIHGYGAGLGLFF-RNFDDLAK-IRNVYAIDLLGFGRSSRPKF 135 (365)
T ss_pred hcCCCcceeeeecCCCceeEEEeecccc--cCCCcEEEEeccchhHHHHH-Hhhhhhhh-cCceEEecccCCCCCCCCCC
Confidence 3456666777777777776665555443 45889999999999888454 44567777 59999999999999988653
Q ss_pred cCC---CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcC-C------CC
Q 035721 106 HIP---DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQK-F------KP 175 (308)
Q Consensus 106 ~~~---~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~-~------~~ 175 (308)
... ....+++-++++.... +-++.+|+|||+||++|..||.+||++|+.|||++|....... . .+
T Consensus 136 ~~d~~~~e~~fvesiE~WR~~~-----~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~ 210 (365)
T KOG4409|consen 136 SIDPTTAEKEFVESIEQWRKKM-----GLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPP 210 (365)
T ss_pred CCCcccchHHHHHHHHHHHHHc-----CCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCC
Confidence 311 1223334444443333 4449999999999999999999999999999999998654432 1 11
Q ss_pred CchhhhhHHHhhhhCCCcccccCCCCCCCcccc---cHH--------HHHH-HhhCCCCCCCcchHHHHHHHHH-----H
Q 035721 176 PWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFK---EEW--------KRKL-ALSSPRRPVARPRAATALELLR-----V 238 (308)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~ 238 (308)
..+..........+.+........ .+...... ... ..+. ...-.......++.......+. +
T Consensus 211 ~~w~~~~~~~~~~~nPl~~LR~~G-p~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~A 289 (365)
T KOG4409|consen 211 PEWYKALFLVATNFNPLALLRLMG-PLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWA 289 (365)
T ss_pred hHHHhhhhhhhhcCCHHHHHHhcc-ccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchh
Confidence 111111111111111100000000 00000000 000 0000 0000011122222222222111 1
Q ss_pred HHHhhhhcCCCC--cceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 239 SRDLQGRFEEVE--VPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 239 ~~~~~~~~~~i~--~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
...+.+.+..++ ||+++|+|++|.+ +.....++...+....++.++++++||.++ ++|+.|++.|.+.
T Consensus 290 r~Pm~~r~~~l~~~~pv~fiyG~~dWm-D~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~ 360 (365)
T KOG4409|consen 290 RRPMIQRLRELKKDVPVTFIYGDRDWM-DKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEE 360 (365)
T ss_pred hhhHHHHHHhhccCCCEEEEecCcccc-cchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHH
Confidence 234455555554 9999999999965 455555555554445699999999999999 9999999998764
No 29
>PRK07581 hypothetical protein; Validated
Probab=99.97 E-value=5.8e-31 Score=211.26 Aligned_cols=258 Identities=10% Similarity=0.018 Sum_probs=153.7
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHH---HHHHHcCCeEEEecCCCCcCCCCccc--cCCCcch
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTA---VLFAKSGFATCAIDHQGHGFSDGLVA--HIPDLNP 112 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~---~~l~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~ 112 (308)
+.+|.+++|..+++... ...|+||++||++++.. +|..+. +.|..++|+|+++|+||||.|+.+.. ..++++.
T Consensus 22 ~~~~~~l~y~~~G~~~~-~~~~~vll~~~~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 99 (339)
T PRK07581 22 TLPDARLAYKTYGTLNA-AKDNAILYPTWYSGTHQ-DNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAAR 99 (339)
T ss_pred CcCCceEEEEecCccCC-CCCCEEEEeCCCCCCcc-cchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCC
Confidence 45688999999886421 12467777788776655 444332 35655679999999999999986532 1234443
Q ss_pred -----HHHHHHH----HHHHHHHhcCCCCC-EEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhh
Q 035721 113 -----VVEDAIS----FFDSFRARHAPDLP-AFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHL 182 (308)
Q Consensus 113 -----~~~d~~~----~l~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 182 (308)
+++|+.+ ++++++.. + ++|+||||||++|+.+|.++|++|+++|++++........ .......
T Consensus 100 ~~~~~~~~~~~~~~~~l~~~lgi~-----~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~--~~~~~~~ 172 (339)
T PRK07581 100 FPHVTIYDNVRAQHRLLTEKFGIE-----RLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHN--FVFLEGL 172 (339)
T ss_pred CCceeHHHHHHHHHHHHHHHhCCC-----ceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHH--HHHHHHH
Confidence 5677765 55566665 8 5799999999999999999999999999998754321100 0000000
Q ss_pred HHHhhhhCCCccccc--------------------------CCCCCCCccccc-HHHHHHHhhCCCCCCCcchHHHHHHH
Q 035721 183 LFTVAWLVPTWRVVP--------------------------TRGSLPMVSFKE-EWKRKLALSSPRRPVARPRAATALEL 235 (308)
Q Consensus 183 ~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (308)
...+.. .+.+.... ............ ..........................
T Consensus 173 ~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 251 (339)
T PRK07581 173 KAALTA-DPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWT 251 (339)
T ss_pred HHHHHh-CCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHH
Confidence 000000 00000000 000000000000 00000000000000000111111100
Q ss_pred HH------H---HHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecC-Cccccc-CCchhhHHHh
Q 035721 236 LR------V---SRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPG-MWHQLI-GEPEENVELV 304 (308)
Q Consensus 236 ~~------~---~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~-~~~~~~~~~i 304 (308)
.. . ..+....++++++|+|+|+|++|..+|++.++.+.+.+ ++++++++++ +||..+ ++++.+...|
T Consensus 252 ~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i--p~a~l~~i~~~~GH~~~~~~~~~~~~~~ 329 (339)
T PRK07581 252 WQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALI--PNAELRPIESIWGHLAGFGQNPADIAFI 329 (339)
T ss_pred hhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCeEEEeCCCCCccccccCcHHHHHHH
Confidence 00 0 01344567889999999999999999999999999888 6799999999 999999 9999999888
Q ss_pred hhc
Q 035721 305 FGE 307 (308)
Q Consensus 305 ~~~ 307 (308)
.++
T Consensus 330 ~~~ 332 (339)
T PRK07581 330 DAA 332 (339)
T ss_pred HHH
Confidence 765
No 30
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.97 E-value=2.2e-31 Score=205.56 Aligned_cols=243 Identities=18% Similarity=0.195 Sum_probs=157.2
Q ss_pred EEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHH
Q 035721 44 LFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDS 123 (308)
Q Consensus 44 l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 123 (308)
++|..+++.+ .+|+||++||++.+.. .|..+++.|. .||+|+++|+||||.|+.... .++++++++|+.++++.
T Consensus 2 ~~~~~~g~~~---~~~~li~~hg~~~~~~-~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~i~~ 75 (251)
T TIGR02427 2 LHYRLDGAAD---GAPVLVFINSLGTDLR-MWDPVLPALT-PDFRVLRYDKRGHGLSDAPEG-PYSIEDLADDVLALLDH 75 (251)
T ss_pred ceEEeecCCC---CCCeEEEEcCcccchh-hHHHHHHHhh-cccEEEEecCCCCCCCCCCCC-CCCHHHHHHHHHHHHHH
Confidence 5666665432 3789999999988877 6688888886 579999999999999976543 35888999999999988
Q ss_pred HHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhh-----hHHHhhhhCCCcccccC
Q 035721 124 FRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH-----LLFTVAWLVPTWRVVPT 198 (308)
Q Consensus 124 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 198 (308)
+..+ +++++|||+||.+++.+|.++|++++++|++++................ ...........+. .
T Consensus 76 ~~~~-----~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-- 147 (251)
T TIGR02427 76 LGIE-----RAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWF-T-- 147 (251)
T ss_pred hCCC-----ceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHc-c--
Confidence 7655 8999999999999999999999999999999875432211000000000 0000000000000 0
Q ss_pred CCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcC
Q 035721 199 RGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAAS 278 (308)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 278 (308)
. .+.. ........+...... .............. ..+....+.++++|+++++|++|.+++.+..+.+.+.+
T Consensus 148 ~-~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~-- 219 (251)
T TIGR02427 148 P-GFRE---AHPARLDLYRNMLVR-QPPDGYAGCCAAIR-DADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLV-- 219 (251)
T ss_pred c-cccc---CChHHHHHHHHHHHh-cCHHHHHHHHHHHh-cccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhC--
Confidence 0 0000 000000000000000 00000000000010 12233556788999999999999999999999888888
Q ss_pred CCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 279 KDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 279 ~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++.++++++++||+++ ++|+++.+.+.+++
T Consensus 220 ~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 250 (251)
T TIGR02427 220 PGARFAEIRGAGHIPCVEQPEAFNAALRDFL 250 (251)
T ss_pred CCceEEEECCCCCcccccChHHHHHHHHHHh
Confidence 5789999999999999 99999998887764
No 31
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.97 E-value=4.5e-31 Score=212.37 Aligned_cols=260 Identities=15% Similarity=0.105 Sum_probs=160.2
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCccch----------HHHHHH---HHHHHcCCeEEEecCCC--CcCCCC
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSW----------IVQLTA---VLFAKSGFATCAIDHQG--HGFSDG 102 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~----------~~~~~~---~~l~~~g~~v~~~d~~G--~G~s~~ 102 (308)
..+|.+|+|..+++.+. ..+++|||+||++++... +|+.++ ..|..++|+|+++|+|| ||.|..
T Consensus 12 ~~~~~~~~y~~~g~~~~-~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~ 90 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNA-ERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGP 90 (351)
T ss_pred ccCCceEEEEeccccCC-CCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCC
Confidence 45788999999987432 235789999999987632 467665 25555679999999999 565543
Q ss_pred c----cc-------cCCCcchHHHHHHHHHHHHHHhcCCCCC-EEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCC
Q 035721 103 L----VA-------HIPDLNPVVEDAISFFDSFRARHAPDLP-AFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGIS 170 (308)
Q Consensus 103 ~----~~-------~~~~~~~~~~d~~~~l~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 170 (308)
. .. ..++++++++|+.++++.++.. + ++++||||||.+++.++.++|++|+++|++++.....
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 165 (351)
T TIGR01392 91 SSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIE-----QIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHS 165 (351)
T ss_pred CCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCC-----CceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCC
Confidence 1 11 1357889999999999988766 7 9999999999999999999999999999999865432
Q ss_pred cCCCCCchhhhhHHHhhhhCCCcccccCCCC-CCCccc-----------cc-HHHHHHHhhCCCC---------------
Q 035721 171 QKFKPPWPLEHLLFTVAWLVPTWRVVPTRGS-LPMVSF-----------KE-EWKRKLALSSPRR--------------- 222 (308)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----------~~-~~~~~~~~~~~~~--------------- 222 (308)
.... .........+... ..+........ ...... .. .............
T Consensus 166 ~~~~--~~~~~~~~~~~~~-~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 242 (351)
T TIGR01392 166 AWCI--AFNEVQRQAILAD-PNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVE 242 (351)
T ss_pred HHHH--HHHHHHHHHHHhC-CCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHH
Confidence 1100 0000000000000 00000000000 000000 00 0000000000000
Q ss_pred ------------CCCcchHHHHHHHHHHH------HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEE
Q 035721 223 ------------PVARPRAATALELLRVS------RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLS 284 (308)
Q Consensus 223 ------------~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 284 (308)
................. .+..+.+++|++|+|+|+|++|.++|++.++.+.+.+ ++++++
T Consensus 243 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i--~~~~~~ 320 (351)
T TIGR01392 243 SYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKAL--PAAGLR 320 (351)
T ss_pred HHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHH--hhcCCc
Confidence 00000000000111110 1124667889999999999999999999999999999 455554
Q ss_pred -----EecCCccccc-CCchhhHHHhhhcC
Q 035721 285 -----IYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 285 -----~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
+++++||.++ ++|+++++.|.+++
T Consensus 321 v~~~~i~~~~GH~~~le~p~~~~~~l~~FL 350 (351)
T TIGR01392 321 VTYVEIESPYGHDAFLVETDQVEELIRGFL 350 (351)
T ss_pred eEEEEeCCCCCcchhhcCHHHHHHHHHHHh
Confidence 5678999999 99999999998764
No 32
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.97 E-value=1.3e-30 Score=200.58 Aligned_cols=232 Identities=20% Similarity=0.174 Sum_probs=146.3
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
+|+|||+||++++.. .|..+.+.|.+ +|+|+++|+||+|.|..... ++++++++++.+.+ ..+++++
T Consensus 4 ~~~iv~~HG~~~~~~-~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~---------~~~~~lv 70 (245)
T TIGR01738 4 NVHLVLIHGWGMNAE-VFRCLDEELSA-HFTLHLVDLPGHGRSRGFGP--LSLADAAEAIAAQA---------PDPAIWL 70 (245)
T ss_pred CceEEEEcCCCCchh-hHHHHHHhhcc-CeEEEEecCCcCccCCCCCC--cCHHHHHHHHHHhC---------CCCeEEE
Confidence 478999999998887 67889999975 59999999999999876432 35555555554432 2399999
Q ss_pred EechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCC-chhhhhHH-HhhhhCCCcc-----cccCCCCCCCcccccH
Q 035721 138 SESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPP-WPLEHLLF-TVAWLVPTWR-----VVPTRGSLPMVSFKEE 210 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 210 (308)
||||||.+++.++.++|++++++|++++........... ........ .......... ..... .+... ....
T Consensus 71 G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~ 148 (245)
T TIGR01738 71 GWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQ-TLGTP-TARQ 148 (245)
T ss_pred EEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHH-HhcCC-ccch
Confidence 999999999999999999999999998865432211100 00000010 0000000000 00000 00000 0000
Q ss_pred HHHHHHhhCCCCCCCc--chHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecC
Q 035721 211 WKRKLALSSPRRPVAR--PRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPG 288 (308)
Q Consensus 211 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (308)
.... ........... ............ .+....+.++++|+++++|++|.+++++..+.+.+.+ ++++++++++
T Consensus 149 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~ 224 (245)
T TIGR01738 149 DARA-LKQTLLARPTPNVQVLQAGLEILAT-VDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLA--PHSELYIFAK 224 (245)
T ss_pred HHHH-HHHHhhccCCCCHHHHHHHHHHhhc-ccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhC--CCCeEEEeCC
Confidence 0000 00000000000 111111111111 2334567889999999999999999999999888888 6899999999
Q ss_pred Cccccc-CCchhhHHHhhhcC
Q 035721 289 MWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 289 ~gH~~~-~~~~~~~~~i~~~i 308 (308)
+||+++ ++|+++++.|.++|
T Consensus 225 ~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 225 AAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred CCCCccccCHHHHHHHHHhhC
Confidence 999999 99999999999876
No 33
>PRK13604 luxD acyl transferase; Provisional
Probab=99.97 E-value=9.4e-29 Score=187.90 Aligned_cols=237 Identities=14% Similarity=0.108 Sum_probs=161.9
Q ss_pred ccceeEEcCCCcEEEEEEecCCCC-CCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCC-cCCCCccccCC
Q 035721 31 HSSEYITNSRGLRLFTQWWTPLPP-AKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGH-GFSDGLVAHIP 108 (308)
Q Consensus 31 ~~~~~~~~~~g~~l~~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~~ 108 (308)
..+..+.+.||.+|+.++..|++. ..+.++||++||++++.. .+..+++.|+++||.|+.+|+||+ |.|++.... .
T Consensus 9 ~~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~-~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~-~ 86 (307)
T PRK13604 9 TIDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMD-HFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDE-F 86 (307)
T ss_pred chhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChH-HHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccc-C
Confidence 455678889999999988888632 246789999999999765 467999999999999999999987 999775443 2
Q ss_pred CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhh
Q 035721 109 DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAW 188 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (308)
+......|+.+++++++.. +..++.|+||||||.+|+..|... +++++|+.+|......... . .+..
T Consensus 87 t~s~g~~Dl~aaid~lk~~--~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~------~---~~~~ 153 (307)
T PRK13604 87 TMSIGKNSLLTVVDWLNTR--GINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLE------R---ALGY 153 (307)
T ss_pred cccccHHHHHHHHHHHHhc--CCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHH------H---hhhc
Confidence 5555689999999999876 567899999999999997777643 3999999999766431110 0 0000
Q ss_pred hCCCcccccCCC--CCCCcccc-cHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccC
Q 035721 189 LVPTWRVVPTRG--SLPMVSFK-EEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCD 265 (308)
Q Consensus 189 ~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~ 265 (308)
....+....... .+...... ..........+.. ......+.++++++|+|+|||++|.+||
T Consensus 154 ~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~----------------~~~s~i~~~~~l~~PvLiIHG~~D~lVp 217 (307)
T PRK13604 154 DYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWD----------------TLDSTINKMKGLDIPFIAFTANNDSWVK 217 (307)
T ss_pred ccccCcccccccccccccccccHHHHHHHHHhcCcc----------------ccccHHHHHhhcCCCEEEEEcCCCCccC
Confidence 000000000000 00000000 0000000000000 0011224456778999999999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEEecCCcccccCCch
Q 035721 266 PACVEELYKRAASKDKTLSIYPGMWHQLIGEPE 298 (308)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 298 (308)
++.++.+++.+++.++++++++|++|.+.+++-
T Consensus 218 ~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~~~~ 250 (307)
T PRK13604 218 QSEVIDLLDSIRSEQCKLYSLIGSSHDLGENLV 250 (307)
T ss_pred HHHHHHHHHHhccCCcEEEEeCCCccccCcchH
Confidence 999999999986567999999999999987764
No 34
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.97 E-value=2.1e-31 Score=202.63 Aligned_cols=220 Identities=27% Similarity=0.349 Sum_probs=150.6
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc-cCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEe
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-HIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSE 139 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~ 139 (308)
|||+||++++.. .|..+++.|+ +||+|+++|+||+|.|+.... ..++++++++|+.++++.+..+ +++++||
T Consensus 1 vv~~hG~~~~~~-~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~-----~~~lvG~ 73 (228)
T PF12697_consen 1 VVFLHGFGGSSE-SWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIK-----KVILVGH 73 (228)
T ss_dssp EEEE-STTTTGG-GGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTS-----SEEEEEE
T ss_pred eEEECCCCCCHH-HHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccc-----ccccccc
Confidence 799999999986 6788999995 799999999999999998653 2357888999999999988775 9999999
Q ss_pred chhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCC---CCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHH
Q 035721 140 SLGGAIALYITLRQKGAWDGLILNGAMCGISQKFK---PPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLA 216 (308)
Q Consensus 140 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (308)
|+||.+++.++.++|++|+++|++++......... ...................... . ..............
T Consensus 74 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~ 148 (228)
T PF12697_consen 74 SMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASR----F-FYRWFDGDEPEDLI 148 (228)
T ss_dssp THHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH----H-HHHHHTHHHHHHHH
T ss_pred ccccccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccc----c-cccccccccccccc
Confidence 99999999999999999999999999764321100 0000000000000000000000 0 00000000001111
Q ss_pred hhCCCCCCCcchHHHHHHHHH---HHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCcccc
Q 035721 217 LSSPRRPVARPRAATALELLR---VSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQL 293 (308)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 293 (308)
.. .......... ...+....++++++|+++++|++|.+++.+..+.+.+.+ +++++++++++||++
T Consensus 149 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~ 217 (228)
T PF12697_consen 149 RS---------SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKL--PNAELVVIPGAGHFL 217 (228)
T ss_dssp HH---------HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHS--TTEEEEEETTSSSTH
T ss_pred cc---------cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHC--CCCEEEEECCCCCcc
Confidence 00 1111222221 224555677888999999999999999988999998888 689999999999999
Q ss_pred c-CCchhhHHH
Q 035721 294 I-GEPEENVEL 303 (308)
Q Consensus 294 ~-~~~~~~~~~ 303 (308)
+ ++|++++++
T Consensus 218 ~~~~p~~~~~a 228 (228)
T PF12697_consen 218 FLEQPDEVAEA 228 (228)
T ss_dssp HHHSHHHHHHH
T ss_pred HHHCHHHHhcC
Confidence 9 999998764
No 35
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.97 E-value=1.9e-30 Score=200.77 Aligned_cols=246 Identities=17% Similarity=0.155 Sum_probs=155.0
Q ss_pred CCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHH
Q 035721 39 SRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAI 118 (308)
Q Consensus 39 ~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 118 (308)
.+|.++.|.. |. +.+|+|||+||++.+.. .|..+.+.|.+.||+|+++|+||||.|.......++++++++++.
T Consensus 4 ~~~~~~~~~~--~~---~~~p~vvliHG~~~~~~-~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~ 77 (273)
T PLN02211 4 ENGEEVTDMK--PN---RQPPHFVLIHGISGGSW-CWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLI 77 (273)
T ss_pred cccccccccc--cc---CCCCeEEEECCCCCCcC-cHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHH
Confidence 4677777754 32 34789999999998876 778999999888999999999999988654433358888899999
Q ss_pred HHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh---hhhCCC---
Q 035721 119 SFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV---AWLVPT--- 192 (308)
Q Consensus 119 ~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--- 192 (308)
++++.+.. ..+++++||||||.++..++.++|++|+++|++++........ ......... ......
T Consensus 78 ~~i~~l~~----~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~ 149 (273)
T PLN02211 78 DFLSSLPE----NEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQ----TDEDMKDGVPDLSEFGDVYEL 149 (273)
T ss_pred HHHHhcCC----CCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCC----HHHHHhccccchhhhccceee
Confidence 88887642 1399999999999999999999999999999998753211100 000000000 000000
Q ss_pred -cccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHH-----HHH--HHhhhhcCCC-CcceEEEeeCCCcc
Q 035721 193 -WRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELL-----RVS--RDLQGRFEEV-EVPMLICHGGDDVV 263 (308)
Q Consensus 193 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~i-~~P~l~i~g~~D~~ 263 (308)
+...... ..................+. ............ ... .+..+...++ ++|+++|.|++|..
T Consensus 150 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ 224 (273)
T PLN02211 150 GFGLGPDQ-PPTSAIIKKEFRRKILYQMS----PQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHV 224 (273)
T ss_pred eeccCCCC-CCceeeeCHHHHHHHHhcCC----CHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCC
Confidence 0000000 00000010110111100000 000000000000 000 0111223345 78999999999999
Q ss_pred cChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhh
Q 035721 264 CDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFG 306 (308)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~ 306 (308)
+|++.++.+.+.+ ++.+++.++ +||.++ ++|+++++.|.+
T Consensus 225 ip~~~~~~m~~~~--~~~~~~~l~-~gH~p~ls~P~~~~~~i~~ 265 (273)
T PLN02211 225 VKPEQQEAMIKRW--PPSQVYELE-SDHSPFFSTPFLLFGLLIK 265 (273)
T ss_pred CCHHHHHHHHHhC--CccEEEEEC-CCCCccccCHHHHHHHHHH
Confidence 9999999999988 567899997 899999 999999988875
No 36
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=6.3e-31 Score=210.86 Aligned_cols=255 Identities=15% Similarity=0.061 Sum_probs=154.0
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCccch-----------HHHHHHH---HHHHcCCeEEEecCCCCcCCCCc
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSW-----------IVQLTAV---LFAKSGFATCAIDHQGHGFSDGL 103 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~-----------~~~~~~~---~l~~~g~~v~~~d~~G~G~s~~~ 103 (308)
..+|.+++|..+|+.+ . ++||+||+.++... +|..+.+ .|...+|+|+++|+||||.|...
T Consensus 42 ~~~~~~l~y~~~G~~~----~-p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~ 116 (343)
T PRK08775 42 GLEDLRLRYELIGPAG----A-PVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV 116 (343)
T ss_pred CCCCceEEEEEeccCC----C-CEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC
Confidence 4478899999887522 2 36777666655542 5677775 56444699999999999988432
Q ss_pred cccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhH
Q 035721 104 VAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLL 183 (308)
Q Consensus 104 ~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 183 (308)
.++.+++++|+.++++.++.+. .++++||||||++|+.+|.++|++|+++|++++....... ........
T Consensus 117 ---~~~~~~~a~dl~~ll~~l~l~~----~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~---~~~~~~~~ 186 (343)
T PRK08775 117 ---PIDTADQADAIALLLDALGIAR----LHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPY---AAAWRALQ 186 (343)
T ss_pred ---CCCHHHHHHHHHHHHHHcCCCc----ceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHH---HHHHHHHH
Confidence 2477889999999999987751 3579999999999999999999999999999986432110 00000000
Q ss_pred HHhhhhCCCcccccCC----CCCCCcccccHH-HHHHHhhCCCCCC-------------------CcchHHHHHHHHHHH
Q 035721 184 FTVAWLVPTWRVVPTR----GSLPMVSFKEEW-KRKLALSSPRRPV-------------------ARPRAATALELLRVS 239 (308)
Q Consensus 184 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~ 239 (308)
................ .......+.... ....+........ ...............
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 266 (343)
T PRK08775 187 RRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESI 266 (343)
T ss_pred HHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHH
Confidence 0000000000000000 000000000000 0000000000000 000000011111110
Q ss_pred HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecC-Cccccc-CCchhhHHHhhhcC
Q 035721 240 RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPG-MWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 240 ~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~-~~~~~~~~~i~~~i 308 (308)
......+.++++|+|+++|++|.++|++..+.+.+.+. ++++++++++ +||.++ ++|+++++.|.+++
T Consensus 267 ~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~-p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL 336 (343)
T PRK08775 267 DLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLG-PRGSLRVLRSPYGHDAFLKETDRIDAILTTAL 336 (343)
T ss_pred hhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcC-CCCeEEEEeCCccHHHHhcCHHHHHHHHHHHH
Confidence 01122467899999999999999999999999888874 4789999985 999999 99999999988764
No 37
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.97 E-value=8e-31 Score=201.27 Aligned_cols=230 Identities=19% Similarity=0.190 Sum_probs=140.7
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
+|+|||+||++++.. .|+.+.+.| + +|+|+++|+||||.|+.+.. .+++++++|+.++++.+..+ +++++
T Consensus 2 ~p~vvllHG~~~~~~-~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~l~~~l~~~~~~-----~~~lv 71 (242)
T PRK11126 2 LPWLVFLHGLLGSGQ-DWQPVGEAL-P-DYPRLYIDLPGHGGSAAISV--DGFADVSRLLSQTLQSYNIL-----PYWLV 71 (242)
T ss_pred CCEEEEECCCCCChH-HHHHHHHHc-C-CCCEEEecCCCCCCCCCccc--cCHHHHHHHHHHHHHHcCCC-----CeEEE
Confidence 568999999998886 778999988 3 59999999999999987554 37889999999999987665 99999
Q ss_pred EechhhHHHHHHHHhcCCC-ccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCC----CCCCCcccccHHH
Q 035721 138 SESLGGAIALYITLRQKGA-WDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTR----GSLPMVSFKEEWK 212 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~p~~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 212 (308)
||||||.+|+.++.++|++ |++++++++.......................+.......... ...... ......
T Consensus 72 G~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 150 (242)
T PRK11126 72 GYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFAS-LNAEQR 150 (242)
T ss_pred EECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhc-cCccHH
Confidence 9999999999999999764 9999999876433211000000000000000000000000000 000000 000000
Q ss_pred HHHHhhCCCCCCCcchHHHHHHHH--HHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCc
Q 035721 213 RKLALSSPRRPVARPRAATALELL--RVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMW 290 (308)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 290 (308)
...... ..... ........... ....+..+.+.++++|+++++|++|..+. .+.+. .++++++++++|
T Consensus 151 ~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~---~~~~~~~i~~~g 220 (242)
T PRK11126 151 QQLVAK-RSNNN-GAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ---LALPLHVIPNAG 220 (242)
T ss_pred HHHHHh-cccCC-HHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH---hcCeEEEeCCCC
Confidence 000000 00000 00000000000 00013345678899999999999998552 22333 268999999999
Q ss_pred cccc-CCchhhHHHhhhcC
Q 035721 291 HQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 291 H~~~-~~~~~~~~~i~~~i 308 (308)
|+++ ++|+++++.|.+++
T Consensus 221 H~~~~e~p~~~~~~i~~fl 239 (242)
T PRK11126 221 HNAHRENPAAFAASLAQIL 239 (242)
T ss_pred CchhhhChHHHHHHHHHHH
Confidence 9999 99999999987754
No 38
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=5.8e-30 Score=207.27 Aligned_cols=262 Identities=13% Similarity=0.058 Sum_probs=159.1
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCccch------------HHHHHHH---HHHHcCCeEEEecCCCC-cCCC
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSW------------IVQLTAV---LFAKSGFATCAIDHQGH-GFSD 101 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~------------~~~~~~~---~l~~~g~~v~~~d~~G~-G~s~ 101 (308)
+.+|.+++|..+|..++ ..+|+|||+||++++... +|..++. .|...+|+|+++|++|+ |.|.
T Consensus 29 ~~~~~~~~y~~~G~~~~-~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~ 107 (379)
T PRK00175 29 VLPPVELAYETYGTLNA-DRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGST 107 (379)
T ss_pred CcCCceEEEEeccccCC-CCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCC
Confidence 34677889999985432 236899999999998762 3666652 34345799999999983 5443
Q ss_pred Cccc-------------cCCCcchHHHHHHHHHHHHHHhcCCCCC-EEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 102 GLVA-------------HIPDLNPVVEDAISFFDSFRARHAPDLP-AFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 102 ~~~~-------------~~~~~~~~~~d~~~~l~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
.+.. ..++++++++++.+++++++.. + ++++||||||.+++.++.++|++|+++|++++..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-----~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 182 (379)
T PRK00175 108 GPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGIT-----RLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSA 182 (379)
T ss_pred CCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCC-----CceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCc
Confidence 3210 1368999999999999998876 7 5899999999999999999999999999999865
Q ss_pred CCCcCCCCCchhhhhHHHhhhhCCCcccccC--------------------------------CCCCCCcc--------c
Q 035721 168 GISQKFKPPWPLEHLLFTVAWLVPTWRVVPT--------------------------------RGSLPMVS--------F 207 (308)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~--------~ 207 (308)
....... .........+.. .+.+..... ........ .
T Consensus 183 ~~~~~~~--~~~~~~~~~i~~-~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~ 259 (379)
T PRK00175 183 RLSAQNI--AFNEVARQAILA-DPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEF 259 (379)
T ss_pred ccCHHHH--HHHHHHHHHHHh-CCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccc
Confidence 4321100 000000000000 000000000 00000000 0
Q ss_pred ccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH-------HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCC-
Q 035721 208 KEEWKRKLALSSPRRPVARPRAATALELLRVS-------RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASK- 279 (308)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~- 279 (308)
................................ .++.+.+.+|++|+|+|+|++|.++|++.++.+.+.+++.
T Consensus 260 ~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~ 339 (379)
T PRK00175 260 QVESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAG 339 (379)
T ss_pred hHHHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcC
Confidence 00000000000000000000011111111110 1245667899999999999999999999999999999431
Q ss_pred -CCcEEEec-CCccccc-CCchhhHHHhhhcC
Q 035721 280 -DKTLSIYP-GMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 280 -~~~~~~~~-~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++++++++ ++||.++ ++|+++++.|.+++
T Consensus 340 ~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL 371 (379)
T PRK00175 340 ADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFL 371 (379)
T ss_pred CCeEEEEeCCCCCchhHhcCHHHHHHHHHHHH
Confidence 13777775 8999999 99999999888763
No 39
>PLN02511 hydrolase
Probab=99.97 E-value=7.5e-30 Score=206.53 Aligned_cols=264 Identities=15% Similarity=0.133 Sum_probs=161.0
Q ss_pred cccccceeEEcCCCcEEEEEEecCC--CCCCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPL--PPAKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV 104 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~--~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 104 (308)
.+.++...+.+.||..+.+.++.+. .....+|+||++||+++++. .|+..++..+.++||+|+++|+||||.|....
T Consensus 68 ~~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~ 147 (388)
T PLN02511 68 AVRYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT 147 (388)
T ss_pred CCceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC
Confidence 4556777889999998887655421 11234789999999987764 25566777777889999999999999997643
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCC--ccEEEEeCCcCCCCcC---CCCCc--
Q 035721 105 AHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGA--WDGLILNGAMCGISQK---FKPPW-- 177 (308)
Q Consensus 105 ~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--v~~~vl~~~~~~~~~~---~~~~~-- 177 (308)
... ....+++|+.++++++.... +..+++++||||||.+++.++.+++++ |.++++++++...... .....
T Consensus 148 ~~~-~~~~~~~Dl~~~i~~l~~~~-~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~ 225 (388)
T PLN02511 148 PQF-YSASFTGDLRQVVDHVAGRY-PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNN 225 (388)
T ss_pred cCE-EcCCchHHHHHHHHHHHHHC-CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHH
Confidence 322 34567899999999999864 445899999999999999999999987 8888888775543100 00000
Q ss_pred h-hhhhHHHhhhhCCCccc--ccCCCCCCCccc-ccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcce
Q 035721 178 P-LEHLLFTVAWLVPTWRV--VPTRGSLPMVSF-KEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPM 253 (308)
Q Consensus 178 ~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 253 (308)
. ...+...+......... ......+..... ......+................ .++.. .+....+.+|++|+
T Consensus 226 ~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~---~yy~~-~s~~~~L~~I~vPt 301 (388)
T PLN02511 226 VYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVD---AYYSN-SSSSDSIKHVRVPL 301 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHH---HHHHH-cCchhhhccCCCCe
Confidence 0 00011111111110000 000000000000 00000000000000000111111 11111 22345688999999
Q ss_pred EEEeeCCCcccChHHH-HHHHHHhcCCCCcEEEecCCccccc-CCchh
Q 035721 254 LICHGGDDVVCDPACV-EELYKRAASKDKTLSIYPGMWHQLI-GEPEE 299 (308)
Q Consensus 254 l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~ 299 (308)
|+|+|++|++++.+.. ....+.. +++++++++++||..+ +.|+.
T Consensus 302 LiI~g~dDpi~p~~~~~~~~~~~~--p~~~l~~~~~gGH~~~~E~p~~ 347 (388)
T PLN02511 302 LCIQAANDPIAPARGIPREDIKAN--PNCLLIVTPSGGHLGWVAGPEA 347 (388)
T ss_pred EEEEcCCCCcCCcccCcHhHHhcC--CCEEEEECCCcceeccccCCCC
Confidence 9999999999987654 3344445 7899999999999999 88865
No 40
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=1.4e-29 Score=198.17 Aligned_cols=268 Identities=26% Similarity=0.259 Sum_probs=163.0
Q ss_pred ceeEEcCCCc-EEEEEEecCCC-----CCCCcceEEEEccCCCccchHHHHHHHHHHHc-CCeEEEecCCCCc-CCCCcc
Q 035721 33 SEYITNSRGL-RLFTQWWTPLP-----PAKTLGVLCVVHGFTGESSWIVQLTAVLFAKS-GFATCAIDHQGHG-FSDGLV 104 (308)
Q Consensus 33 ~~~~~~~~g~-~l~~~~~~~~~-----~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G-~s~~~~ 104 (308)
...+....|. ++...+++... ....+++||++|||+++.. .|+.+...|.++ |+.|+++|++|+| .|..+.
T Consensus 27 ~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~-~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~ 105 (326)
T KOG1454|consen 27 STSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSF-SWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPR 105 (326)
T ss_pred ceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcc-cHhhhccccccccceEEEEEecCCCCcCCCCCC
Confidence 3344444453 55555555441 1135899999999999665 778888888776 5999999999999 555566
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEE---EeCCcCCCCcCCCCC--chh
Q 035721 105 AHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLI---LNGAMCGISQKFKPP--WPL 179 (308)
Q Consensus 105 ~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~v---l~~~~~~~~~~~~~~--~~~ 179 (308)
...|+..++++.+..++...... +++++|||+||.+|+.+|+.+|+.|+++| ++++.....+..... ...
T Consensus 106 ~~~y~~~~~v~~i~~~~~~~~~~-----~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~ 180 (326)
T KOG1454|consen 106 GPLYTLRELVELIRRFVKEVFVE-----PVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLL 180 (326)
T ss_pred CCceehhHHHHHHHHHHHhhcCc-----ceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhh
Confidence 66678888888888887777666 89999999999999999999999999999 555543322211000 000
Q ss_pred hhhHHHhhhhCCCcccccCC---CCCCCccc---ccHH-HHHHHhhCCCC-----CCCcchHHHHHHHHHHHHHhhhhcC
Q 035721 180 EHLLFTVAWLVPTWRVVPTR---GSLPMVSF---KEEW-KRKLALSSPRR-----PVARPRAATALELLRVSRDLQGRFE 247 (308)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (308)
...........+.....+.. ..+..... .+.. ........... .......................+.
T Consensus 181 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (326)
T KOG1454|consen 181 DKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIK 260 (326)
T ss_pred hhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhc
Confidence 00111111111110000000 00000000 0000 00000000000 0000000000000000012233456
Q ss_pred CCC-cceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 248 EVE-VPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 248 ~i~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++. +|+++++|++|+++|.+.+..+.+.+ +++++++++++||.++ +.|+++++.+..+|
T Consensus 261 ~i~~~pvlii~G~~D~~~p~~~~~~~~~~~--pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi 321 (326)
T KOG1454|consen 261 KIWKCPVLIIWGDKDQIVPLELAEELKKKL--PNAELVEIPGAGHLPHLERPEEVAALLRSFI 321 (326)
T ss_pred cccCCceEEEEcCcCCccCHHHHHHHHhhC--CCceEEEeCCCCcccccCCHHHHHHHHHHHH
Confidence 665 99999999999999999999999988 7999999999999999 99999999988764
No 41
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.97 E-value=1.7e-29 Score=194.95 Aligned_cols=240 Identities=22% Similarity=0.241 Sum_probs=145.6
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc-cCCCcchHHHH-HHHHHHHHHHhcCCCCCEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-HIPDLNPVVED-AISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~d-~~~~l~~~~~~~~~~~~~~ 135 (308)
+|+||++||++++.. .|..+.+.|+ +||+|+++|+||+|.|+.+.. ...++++.+++ +..+++.+..+ +++
T Consensus 1 ~~~vv~~hG~~~~~~-~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 73 (251)
T TIGR03695 1 KPVLVFLHGFLGSGA-DWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIE-----PFF 73 (251)
T ss_pred CCEEEEEcCCCCchh-hHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCC-----eEE
Confidence 368999999998887 6689999998 789999999999999976543 33466777777 55565555443 999
Q ss_pred EEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhh---hHHHhhhh-CCCccc-ccCCCCCCCcccccH
Q 035721 136 LYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH---LLFTVAWL-VPTWRV-VPTRGSLPMVSFKEE 210 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~ 210 (308)
++|||+||.+++.++.++|++|++++++++................ ....+... ...... ......+........
T Consensus 74 l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (251)
T TIGR03695 74 LVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPP 153 (251)
T ss_pred EEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCCh
Confidence 9999999999999999999999999999886543321110000000 00000000 000000 000000000000001
Q ss_pred HHHHHHhhCCCCCCCcchHHHHHHHHH--HHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecC
Q 035721 211 WKRKLALSSPRRPVARPRAATALELLR--VSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPG 288 (308)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (308)
............. ............. ...+....+.++++|+++++|++|..++ +..+.+.+.. ++++++++++
T Consensus 154 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~--~~~~~~~~~~ 229 (251)
T TIGR03695 154 EQRQALRAKRLAN-NPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLL--PNLTLVIIAN 229 (251)
T ss_pred HHhHHHHHhcccc-cchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcC--CCCcEEEEcC
Confidence 1111111110000 0011111111100 0112234467889999999999998763 5566666666 6789999999
Q ss_pred Cccccc-CCchhhHHHhhhcC
Q 035721 289 MWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 289 ~gH~~~-~~~~~~~~~i~~~i 308 (308)
+||+++ ++|+++++.+.++|
T Consensus 230 ~gH~~~~e~~~~~~~~i~~~l 250 (251)
T TIGR03695 230 AGHNIHLENPEAFAKILLAFL 250 (251)
T ss_pred CCCCcCccChHHHHHHHHHHh
Confidence 999999 99999999888764
No 42
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=5.3e-28 Score=196.51 Aligned_cols=251 Identities=18% Similarity=0.085 Sum_probs=142.9
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcch----HHHHHH
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNP----VVEDAI 118 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~----~~~d~~ 118 (308)
.+++..+.++ ..+|+|||+||++++.. .|....+.|.+. |+|+++|+||||.|+.+.....+.++ +++++.
T Consensus 93 ~~~~~~~~~~---~~~p~vvllHG~~~~~~-~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~ 167 (402)
T PLN02894 93 FINTVTFDSK---EDAPTLVMVHGYGASQG-FFFRNFDALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFE 167 (402)
T ss_pred eEEEEEecCC---CCCCEEEEECCCCcchh-HHHHHHHHHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHH
Confidence 5555544332 24789999999998776 445667888764 99999999999999765322112222 334444
Q ss_pred HHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhh----hHH-Hhhhh----
Q 035721 119 SFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH----LLF-TVAWL---- 189 (308)
Q Consensus 119 ~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~----~~~-~~~~~---- 189 (308)
++++.+. ..+++++||||||.+++.++.++|++|+++|+++|................ ... .....
T Consensus 168 ~~~~~l~-----~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (402)
T PLN02894 168 EWRKAKN-----LSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESN 242 (402)
T ss_pred HHHHHcC-----CCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcC
Confidence 5544443 339999999999999999999999999999999886433221110000000 000 00000
Q ss_pred -CCCcccccCC----------------CCCCCcccccHHHHH--HHhhCCCCCCCcchHHHHHHHH-----HHHHHhhhh
Q 035721 190 -VPTWRVVPTR----------------GSLPMVSFKEEWKRK--LALSSPRRPVARPRAATALELL-----RVSRDLQGR 245 (308)
Q Consensus 190 -~~~~~~~~~~----------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 245 (308)
.+........ ............... .+.... .............. ....+....
T Consensus 243 ~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (402)
T PLN02894 243 FTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHT--LAAKASGELCLKYIFSFGAFARKPLLES 320 (402)
T ss_pred CCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHh--hcCCCchHHHHHHhccCchhhcchHhhh
Confidence 0000000000 000000000000000 000000 00000000000000 011344556
Q ss_pred cCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 246 FEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 246 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
+.++++|+++|+|++|.+.+ .....+.+... ..+++++++++||+++ ++|++|++.|.++
T Consensus 321 l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~-~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~ 381 (402)
T PLN02894 321 ASEWKVPTTFIYGRHDWMNY-EGAVEARKRMK-VPCEIIRVPQGGHFVFLDNPSGFHSAVLYA 381 (402)
T ss_pred cccCCCCEEEEEeCCCCCCc-HHHHHHHHHcC-CCCcEEEeCCCCCeeeccCHHHHHHHHHHH
Confidence 78899999999999998765 55666666553 3589999999999999 9999999998764
No 43
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.96 E-value=1.2e-28 Score=194.89 Aligned_cols=250 Identities=16% Similarity=0.147 Sum_probs=150.1
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc-cCCCc
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA-HIPDL 110 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~ 110 (308)
...++...+|.+++|..+++++ .++|||+||++++.. .+ .+...+...+|+|+++|+||||.|+.... ..++.
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~~~----~~~lvllHG~~~~~~-~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 78 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGNPD----GKPVVFLHGGPGSGT-DP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTT 78 (306)
T ss_pred cCCeEEcCCCcEEEEEECcCCC----CCEEEEECCCCCCCC-CH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCH
Confidence 3457777889999998876432 457999999877654 32 34445555689999999999999986542 23466
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCC------CCchhhhhHH
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFK------PPWPLEHLLF 184 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~------~~~~~~~~~~ 184 (308)
+++++|+..++++++.. +++++||||||.+++.++.++|++++++|++++......... ..........
T Consensus 79 ~~~~~dl~~l~~~l~~~-----~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (306)
T TIGR01249 79 WDLVADIEKLREKLGIK-----NWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQ 153 (306)
T ss_pred HHHHHHHHHHHHHcCCC-----CEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHH
Confidence 78888998888887665 899999999999999999999999999999987644221000 0000000000
Q ss_pred HhhhhCCCccc-ccCCCCCCCcccc-cHH----HHHH---Hhh-CCCCC-----C--CcchHHHHHHHH----HH-----
Q 035721 185 TVAWLVPTWRV-VPTRGSLPMVSFK-EEW----KRKL---ALS-SPRRP-----V--ARPRAATALELL----RV----- 238 (308)
Q Consensus 185 ~~~~~~~~~~~-~~~~~~~~~~~~~-~~~----~~~~---~~~-~~~~~-----~--~~~~~~~~~~~~----~~----- 238 (308)
......+.... ......+....+. ... .... ... ..... . ..+......... ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (306)
T TIGR01249 154 RFMDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFL 233 (306)
T ss_pred HHhhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchh
Confidence 00000000000 0000000000000 000 0000 000 00000 0 001111111110 00
Q ss_pred --HHHhhhhcCCC-CcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 239 --SRDLQGRFEEV-EVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 239 --~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
.......+.++ ++|+++++|++|.++|.+.++.+++.+ +++++++++++||.++
T Consensus 234 ~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 290 (306)
T TIGR01249 234 DVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAF--PEAELKVTNNAGHSAF 290 (306)
T ss_pred cCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhC--CCCEEEEECCCCCCCC
Confidence 01133455667 699999999999999999999999998 6789999999999997
No 44
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.96 E-value=4.2e-27 Score=191.18 Aligned_cols=241 Identities=12% Similarity=0.048 Sum_probs=156.0
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccC
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHI 107 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 107 (308)
+.+.+...+...+|.+|.+..+.|... .+.|+||++||+++....+|..+++.|+++||.|+++|+||+|.|......
T Consensus 165 ~~~~e~v~i~~~~g~~l~g~l~~P~~~-~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~- 242 (414)
T PRK05077 165 PGELKELEFPIPGGGPITGFLHLPKGD-GPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLT- 242 (414)
T ss_pred CCceEEEEEEcCCCcEEEEEEEECCCC-CCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCcc-
Confidence 445677788888888899988888643 567888888887765444667788999999999999999999998653211
Q ss_pred CCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh
Q 035721 108 PDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
.+.. ....++++++..... +..+++++|||+||.+++.+|..+|++++++|++++...... .............
T Consensus 243 ~d~~---~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~--~~~~~~~~~p~~~ 317 (414)
T PRK05077 243 QDSS---LLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLL--TDPKRQQQVPEMY 317 (414)
T ss_pred ccHH---HHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhh--cchhhhhhchHHH
Confidence 1222 222455566654422 556999999999999999999999999999999998653110 0000000000000
Q ss_pred hhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH-HHhhhhc-CCCCcceEEEeeCCCccc
Q 035721 187 AWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS-RDLQGRF-EEVEVPMLICHGGDDVVC 264 (308)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~i~~P~l~i~g~~D~~~ 264 (308)
...+.. .. .... .+ .......+... ......+ .++++|+|+|+|++|.++
T Consensus 318 ~~~la~-~l-----g~~~---~~-------------------~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~iv 369 (414)
T PRK05077 318 LDVLAS-RL-----GMHD---AS-------------------DEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFS 369 (414)
T ss_pred HHHHHH-Hh-----CCCC---CC-------------------hHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCC
Confidence 000000 00 0000 00 00000000000 0001112 578999999999999999
Q ss_pred ChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 265 DPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
|++.++.+.+.. ++.++++++++ ++ +.++++.+.+.++|
T Consensus 370 P~~~a~~l~~~~--~~~~l~~i~~~---~~~e~~~~~~~~i~~wL 409 (414)
T PRK05077 370 PEEDSRLIASSS--ADGKLLEIPFK---PVYRNFDKALQEISDWL 409 (414)
T ss_pred CHHHHHHHHHhC--CCCeEEEccCC---CccCCHHHHHHHHHHHH
Confidence 999999888777 68899999986 34 78888888887653
No 45
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.96 E-value=7.7e-28 Score=196.29 Aligned_cols=241 Identities=18% Similarity=0.200 Sum_probs=153.3
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHH
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDA 117 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 117 (308)
..++.+++|..++++ +.++|||+||++++.. .|..+.+.|... |+|+++|+||||.|...... .+++++++++
T Consensus 115 ~~~~~~i~~~~~g~~----~~~~vl~~HG~~~~~~-~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~ 187 (371)
T PRK14875 115 RIGGRTVRYLRLGEG----DGTPVVLIHGFGGDLN-NWLFNHAALAAG-RPVIALDLPGHGASSKAVGA-GSLDELAAAV 187 (371)
T ss_pred eEcCcEEEEecccCC----CCCeEEEECCCCCccc-hHHHHHHHHhcC-CEEEEEcCCCCCCCCCCCCC-CCHHHHHHHH
Confidence 345677887765542 2578999999998887 567888888765 99999999999999654333 4788888888
Q ss_pred HHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCch--------hhhhHHHhhhh
Q 035721 118 ISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWP--------LEHLLFTVAWL 189 (308)
Q Consensus 118 ~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 189 (308)
..+++.+... +++++|||+||.+++.+|.++|+++.++|++++....... ..... ...+...+...
T Consensus 188 ~~~~~~~~~~-----~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 261 (371)
T PRK14875 188 LAFLDALGIE-----RAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEI-NGDYIDGFVAAESRRELKPVLELL 261 (371)
T ss_pred HHHHHhcCCc-----cEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCccc-chhHHHHhhcccchhHHHHHHHHH
Confidence 8888776544 8999999999999999999999999999999876432210 00000 00000000000
Q ss_pred CCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHH-HH---HHHHhhhhcCCCCcceEEEeeCCCcccC
Q 035721 190 VPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALEL-LR---VSRDLQGRFEEVEVPMLICHGGDDVVCD 265 (308)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~i~~P~l~i~g~~D~~~~ 265 (308)
... ....... ........................ .. ...+....+.++++|+++++|++|.++|
T Consensus 262 ~~~-----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp 329 (371)
T PRK14875 262 FAD-----------PALVTRQ-MVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIP 329 (371)
T ss_pred hcC-----------hhhCCHH-HHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccC
Confidence 000 0000000 000000000000000000000000 00 0123334567889999999999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 266 PACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
++..+.+. .++++.+++++||+++ ++|+++++.|.+++
T Consensus 330 ~~~~~~l~-----~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 368 (371)
T PRK14875 330 AAHAQGLP-----DGVAVHVLPGAGHMPQMEAAADVNRLLAEFL 368 (371)
T ss_pred HHHHhhcc-----CCCeEEEeCCCCCChhhhCHHHHHHHHHHHh
Confidence 87665432 4689999999999999 99999999887764
No 46
>PRK10985 putative hydrolase; Provisional
Probab=99.96 E-value=1e-27 Score=190.54 Aligned_cols=261 Identities=15% Similarity=0.095 Sum_probs=154.9
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH 106 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~ 106 (308)
.+......+.+.||..+.+.+........++|+||++||++++.. .+...+++.|.++||+|+++|+||||.+......
T Consensus 28 ~~~~~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~ 107 (324)
T PRK10985 28 LFTPYWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHR 107 (324)
T ss_pred CCCcceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcc
Confidence 345556678889998877654322222245789999999987744 2556789999999999999999999987543222
Q ss_pred CCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCC--ccEEEEeCCcCCCCcCC---CCC--chh
Q 035721 107 IPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGA--WDGLILNGAMCGISQKF---KPP--WPL 179 (308)
Q Consensus 107 ~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--v~~~vl~~~~~~~~~~~---~~~--~~~ 179 (308)
.+. ....+|+..+++.+.... +..+++++||||||.+++.++.++++. +.++|+++++....... ... ...
T Consensus 108 ~~~-~~~~~D~~~~i~~l~~~~-~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~ 185 (324)
T PRK10985 108 IYH-SGETEDARFFLRWLQREF-GHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVY 185 (324)
T ss_pred eEC-CCchHHHHHHHHHHHHhC-CCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHH
Confidence 122 234688888888887653 456899999999999988888877644 88999998865432110 000 000
Q ss_pred hh-hHHHhhhhCCC-cccccCCCCCCC-cccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEE
Q 035721 180 EH-LLFTVAWLVPT-WRVVPTRGSLPM-VSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLIC 256 (308)
Q Consensus 180 ~~-~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i 256 (308)
.. +...+...... ............ .........+.......... .......++.. .+..+.++++++|+++|
T Consensus 186 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~---g~~~~~~~y~~-~~~~~~l~~i~~P~lii 261 (324)
T PRK10985 186 QRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIH---GFADAIDYYRQ-CSALPLLNQIRKPTLII 261 (324)
T ss_pred HHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccC---CCCCHHHHHHH-CChHHHHhCCCCCEEEE
Confidence 00 00011100000 000000000000 00000000000000000001 11112222222 22346678999999999
Q ss_pred eeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CC
Q 035721 257 HGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GE 296 (308)
Q Consensus 257 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~ 296 (308)
+|++|++++++....+.+.. +++++++++++||+.+ +.
T Consensus 262 ~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 262 HAKDDPFMTHEVIPKPESLP--PNVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred ecCCCCCCChhhChHHHHhC--CCeEEEECCCCCceeeCCC
Confidence 99999999988777776555 6789999999999998 53
No 47
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.95 E-value=2e-27 Score=220.60 Aligned_cols=239 Identities=18% Similarity=0.182 Sum_probs=150.1
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc-------ccCCCcchHHHHHHHHHHHHHHhcC
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV-------AHIPDLNPVVEDAISFFDSFRARHA 129 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~d~~~~l~~~~~~~~ 129 (308)
.+++|||+||++++.. .|..+.+.|.+. |+|+++|+||||.|.... ...++++.+++++.++++.+..+
T Consensus 1370 ~~~~vVllHG~~~s~~-~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~-- 1445 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE-DWIPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPG-- 1445 (1655)
T ss_pred CCCeEEEECCCCCCHH-HHHHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCC--
Confidence 3679999999999987 678899999764 999999999999997542 12357788889999998887655
Q ss_pred CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhh---hhHHHh-----hhhCCCcccccCCCC
Q 035721 130 PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLE---HLLFTV-----AWLVPTWRVVPTRGS 201 (308)
Q Consensus 130 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~~~~~~~~~~~ 201 (308)
+++++||||||.+++.++.++|++|+++|++++............... .....+ ..+...+... .
T Consensus 1446 ---~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~----~ 1518 (1655)
T PLN02980 1446 ---KVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSG----E 1518 (1655)
T ss_pred ---CEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccH----H
Confidence 999999999999999999999999999999987544321110000000 000000 0000000000 0
Q ss_pred CCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHH--HHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCC
Q 035721 202 LPMVSFKEEWKRKLALSSPRRPVARPRAATALELLR--VSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASK 279 (308)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 279 (308)
+.......+.......... ................ ...+..+.+.++++|+|+|+|++|..++ +.++++.+.+++.
T Consensus 1519 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a 1596 (1655)
T PLN02980 1519 LWKSLRNHPHFNKIVASRL-LHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKS 1596 (1655)
T ss_pred HhhhhccCHHHHHHHHHHH-hcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHcccc
Confidence 0000000011110000000 0000001111111100 0123446688999999999999999874 6677777776431
Q ss_pred ----------CCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 280 ----------DKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 280 ----------~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
.+++++++++||+++ ++|+++++.|.+++
T Consensus 1597 ~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL 1636 (1655)
T PLN02980 1597 KESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFL 1636 (1655)
T ss_pred ccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHH
Confidence 258999999999999 99999999988764
No 48
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.94 E-value=7.1e-25 Score=170.05 Aligned_cols=252 Identities=14% Similarity=0.057 Sum_probs=151.2
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCcc---chHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGES---SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~---~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
..+|.++....+.|.+. .++.||++||++... ...+..+++.|+++||.|+++|+||||.|.+.. .+++++.
T Consensus 8 ~~~~~~l~g~~~~p~~~--~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~---~~~~~~~ 82 (274)
T TIGR03100 8 SCEGETLVGVLHIPGAS--HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN---LGFEGID 82 (274)
T ss_pred EcCCcEEEEEEEcCCCC--CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCHHHHH
Confidence 35577888888877653 355777777755321 113467889999999999999999999987542 3677888
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcc
Q 035721 115 EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWR 194 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (308)
+|+.++++.+.....+..+++++|||+||.+++.++.. +++|+++|+++|........... ..... ..........
T Consensus 83 ~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~-~~~~~--~~~~~~~~~~ 158 (274)
T TIGR03100 83 ADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAAS-RIRHY--YLGQLLSADF 158 (274)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHH-HHHHH--HHHHHhChHH
Confidence 99999999987642123479999999999999999765 46899999999874422111111 11010 0000000000
Q ss_pred cccCCCCCCCcccccHHHHHHHhhCCCCC--CCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHH---
Q 035721 195 VVPTRGSLPMVSFKEEWKRKLALSSPRRP--VARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACV--- 269 (308)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~--- 269 (308)
.. .+......-......+......+ ........ ....++...+..+++|+++++|.+|...+ ...
T Consensus 159 ~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~ 228 (274)
T TIGR03100 159 WR----KLLSGEVNLGSSLRGLGDALLKARQKGDEVAHG-----GLAERMKAGLERFQGPVLFILSGNDLTAQ-EFADSV 228 (274)
T ss_pred HH----HhcCCCccHHHHHHHHHHHHHhhhhcCCCcccc-----hHHHHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHh
Confidence 00 00000000000000011000000 00000000 02234455667779999999999998863 222
Q ss_pred ---HHHHHHhcCCCCcEEEecCCccccc--CCchhhHHHhhhcC
Q 035721 270 ---EELYKRAASKDKTLSIYPGMWHQLI--GEPEENVELVFGEM 308 (308)
Q Consensus 270 ---~~~~~~~~~~~~~~~~~~~~gH~~~--~~~~~~~~~i~~~i 308 (308)
..+.+.+..++++++.+++++|++. ..++++.+.|.+++
T Consensus 229 ~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL 272 (274)
T TIGR03100 229 LGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWL 272 (274)
T ss_pred ccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHH
Confidence 4445545446899999999999995 44588888887764
No 49
>PRK05855 short chain dehydrogenase; Validated
Probab=99.94 E-value=8e-26 Score=195.19 Aligned_cols=260 Identities=18% Similarity=0.155 Sum_probs=152.5
Q ss_pred eeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc-ccCCCcch
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV-AHIPDLNP 112 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~~~~ 112 (308)
..+...+|.+|+|..+++.+ .|+|||+||++++.. .|..+.+.| ..||+|+++|+||||.|+... ...+++++
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~----~~~ivllHG~~~~~~-~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 78 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPD----RPTVVLVHGYPDNHE-VWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLAR 78 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCC----CCeEEEEcCCCchHH-HHHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHH
Confidence 34556789999999886532 678999999998876 678899999 557999999999999998643 23468999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc--CCCccEEEEeCCcCCCCc-----CCCCCchhhhhHHH
Q 035721 113 VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ--KGAWDGLILNGAMCGISQ-----KFKPPWPLEHLLFT 185 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~~~~~-----~~~~~~~~~~~~~~ 185 (308)
+++|+..+++.+... .+++++||||||.+++.++.+. ++++..++.+++...... ..............
T Consensus 79 ~a~dl~~~i~~l~~~----~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (582)
T PRK05855 79 LADDFAAVIDAVSPD----RPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARA 154 (582)
T ss_pred HHHHHHHHHHHhCCC----CcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHH
Confidence 999999999988654 2599999999999998887762 344555544443211000 00000000000000
Q ss_pred hhhhCCCccc----ccC-CCCCCCcccccHHHHHHHhhCCCCCCCcchH-------HHHHHHHHH---HHHhhhhcCCCC
Q 035721 186 VAWLVPTWRV----VPT-RGSLPMVSFKEEWKRKLALSSPRRPVARPRA-------ATALELLRV---SRDLQGRFEEVE 250 (308)
Q Consensus 186 ~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~---~~~~~~~~~~i~ 250 (308)
.......+.. ... ........... ................... ......... ..........++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (582)
T PRK05855 155 LGQLLRSWYIYLFHLPVLPELLWRLGLGR-AWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTD 233 (582)
T ss_pred HHHHhhhHHHHHHhCCCCcHHHhccchhh-HHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCcc
Confidence 0000000000 000 00000000000 0000000000000000000 000000000 011122345689
Q ss_pred cceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 251 VPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 251 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
+|+++|+|++|.+++++..+.+.+.+ ++.++++++ +||+++ ++|+++.+.|.++
T Consensus 234 ~P~lii~G~~D~~v~~~~~~~~~~~~--~~~~~~~~~-~gH~~~~e~p~~~~~~i~~f 288 (582)
T PRK05855 234 VPVQLIVPTGDPYVRPALYDDLSRWV--PRLWRREIK-AGHWLPMSHPQVLAAAVAEF 288 (582)
T ss_pred CceEEEEeCCCcccCHHHhccccccC--CcceEEEcc-CCCcchhhChhHHHHHHHHH
Confidence 99999999999999999988888776 567888776 799999 9999998888765
No 50
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.94 E-value=2.8e-25 Score=167.04 Aligned_cols=257 Identities=19% Similarity=0.160 Sum_probs=167.4
Q ss_pred cEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHc-CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHH
Q 035721 42 LRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKS-GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISF 120 (308)
Q Consensus 42 ~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 120 (308)
.++.|..+.........|+++++||+.++.. -|+.+...|+.. +..|+++|.|.||.|+..... +...+++|+..+
T Consensus 36 ~~l~y~~~~~~~~~~~~Pp~i~lHGl~GS~~-Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h--~~~~ma~dv~~F 112 (315)
T KOG2382|consen 36 VRLAYDSVYSSENLERAPPAIILHGLLGSKE-NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVH--NYEAMAEDVKLF 112 (315)
T ss_pred cccceeeeecccccCCCCceEEecccccCCC-CHHHHHHHhcccccCceEEEecccCCCCcccccc--CHHHHHHHHHHH
Confidence 4566666522222356899999999999997 678999999876 789999999999999887665 688999999999
Q ss_pred HHHHHHhcCCCCCEEEEEechhh-HHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCC
Q 035721 121 FDSFRARHAPDLPAFLYSESLGG-AIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTR 199 (308)
Q Consensus 121 l~~~~~~~~~~~~~~l~G~S~Gg-~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (308)
++..+... ...++.++|||||| .+++..+...|+.+..+|+++-.+..... ...........+.............
T Consensus 113 i~~v~~~~-~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~--~~~e~~e~i~~m~~~d~~~~~~~~r 189 (315)
T KOG2382|consen 113 IDGVGGST-RLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGR--SYGEYRELIKAMIQLDLSIGVSRGR 189 (315)
T ss_pred HHHccccc-ccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCc--ccchHHHHHHHHHhccccccccccH
Confidence 99886321 22399999999999 77888888899999999988765541111 1111111111111111110000000
Q ss_pred ----CCCCCcccccHHHHHHHhhCCC------CCCCcchHHHHHHHHHH--HHHhhhhc--CCCCcceEEEeeCCCcccC
Q 035721 200 ----GSLPMVSFKEEWKRKLALSSPR------RPVARPRAATALELLRV--SRDLQGRF--EEVEVPMLICHGGDDVVCD 265 (308)
Q Consensus 200 ----~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~--~~~~~~~~--~~i~~P~l~i~g~~D~~~~ 265 (308)
..+.. ...+....+....+.. .......+.....++.. ...+...+ .....||+++.|.++..++
T Consensus 190 ke~~~~l~~-~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~ 268 (315)
T KOG2382|consen 190 KEALKSLIE-VGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVP 268 (315)
T ss_pred HHHHHHHHH-HhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcC
Confidence 00000 1111112222222221 11111122233333322 12222333 5568999999999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 266 PACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
.+.-.++.+.+ ++++++.++++||+++ |+|+++.+.|.++
T Consensus 269 ~~~~~~~~~~f--p~~e~~~ld~aGHwVh~E~P~~~~~~i~~F 309 (315)
T KOG2382|consen 269 DEHYPRMEKIF--PNVEVHELDEAGHWVHLEKPEEFIESISEF 309 (315)
T ss_pred hhHHHHHHHhc--cchheeecccCCceeecCCHHHHHHHHHHH
Confidence 99999998888 7899999999999999 9999999998875
No 51
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.93 E-value=5.2e-25 Score=176.78 Aligned_cols=261 Identities=13% Similarity=0.037 Sum_probs=159.1
Q ss_pred CCcEEEEEEecCCCCCCCcceEEEEccCCCccc------------hHHHHHHH---HHHHcCCeEEEecCCCCcCCC---
Q 035721 40 RGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS------------WIVQLTAV---LFAKSGFATCAIDHQGHGFSD--- 101 (308)
Q Consensus 40 ~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~------------~~~~~~~~---~l~~~g~~v~~~d~~G~G~s~--- 101 (308)
...+|.|..||..+. ...++||++|++++++. .||..++- .|-...|.||++|..|-|.|.
T Consensus 39 ~~~~~~Y~t~G~ln~-~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~ 117 (389)
T PRK06765 39 PDVQMGYETYGTLNR-AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPN 117 (389)
T ss_pred CCceEEEEeccccCC-CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCC
Confidence 457899999998665 44689999999988542 24554432 243345999999999876521
Q ss_pred ----C-----c--------cccCCCcchHHHHHHHHHHHHHHhcCCCCCEE-EEEechhhHHHHHHHHhcCCCccEEEEe
Q 035721 102 ----G-----L--------VAHIPDLNPVVEDAISFFDSFRARHAPDLPAF-LYSESLGGAIALYITLRQKGAWDGLILN 163 (308)
Q Consensus 102 ----~-----~--------~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~vl~ 163 (308)
+ + .-..++++++++++.+++++++.. ++. ++||||||++++.+|.++|++|+++|++
T Consensus 118 ~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~-----~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~i 192 (389)
T PRK06765 118 VITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIA-----RLHAVMGPSMGGMQAQEWAVHYPHMVERMIGV 192 (389)
T ss_pred CCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCC-----CceEEEEECHHHHHHHHHHHHChHhhheEEEE
Confidence 1 0 112257889999999999988876 776 9999999999999999999999999999
Q ss_pred CCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCC-CCCCc-----------ccc-cHHHHHHHhhC-----------
Q 035721 164 GAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRG-SLPMV-----------SFK-EEWKRKLALSS----------- 219 (308)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------~~~-~~~~~~~~~~~----------- 219 (308)
++......... ..........+ ..-+.+....... .-... ... ..+........
T Consensus 193 a~~~~~~~~~~-~~~~~~~~~ai-~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~ 270 (389)
T PRK06765 193 IGNPQNDAWTS-VNVLQNWAEAI-RLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKV 270 (389)
T ss_pred ecCCCCChhHH-HHHHHHHHHHH-HhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccc
Confidence 87544221100 00000000000 0111110000000 00000 000 00000000000
Q ss_pred -------------CCCCCCcchHHHHHHHHHHHH---------HhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhc
Q 035721 220 -------------PRRPVARPRAATALELLRVSR---------DLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAA 277 (308)
Q Consensus 220 -------------~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 277 (308)
............+..+.+... ++.+.+.++++|+++|+|++|.++|++.++.+.+.++
T Consensus 271 ~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp 350 (389)
T PRK06765 271 STLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQ 350 (389)
T ss_pred cchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 000000000111111111111 3455677899999999999999999999999999885
Q ss_pred C--CCCcEEEecC-Cccccc-CCchhhHHHhhhcC
Q 035721 278 S--KDKTLSIYPG-MWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 278 ~--~~~~~~~~~~-~gH~~~-~~~~~~~~~i~~~i 308 (308)
. ++++++++++ +||..+ ++|+++.+.|.+++
T Consensus 351 ~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL 385 (389)
T PRK06765 351 KQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFL 385 (389)
T ss_pred hcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHH
Confidence 3 3689999985 999999 99999999888764
No 52
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.93 E-value=2.5e-25 Score=155.54 Aligned_cols=215 Identities=17% Similarity=0.209 Sum_probs=161.2
Q ss_pred cccccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHH-HcCCeEEEecCCCCcCCCCcc
Q 035721 26 RHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFA-KSGFATCAIDHQGHGFSDGLV 104 (308)
Q Consensus 26 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~-~~g~~v~~~d~~G~G~s~~~~ 104 (308)
..+++++...+.+.|..++...+...++ +.|+++++||..|+.... -..+..+- .-+..|+.+++||+|.|.+.+
T Consensus 49 ~~n~pye~i~l~T~D~vtL~a~~~~~E~---S~pTlLyfh~NAGNmGhr-~~i~~~fy~~l~mnv~ivsYRGYG~S~Gsp 124 (300)
T KOG4391|consen 49 EFNMPYERIELRTRDKVTLDAYLMLSES---SRPTLLYFHANAGNMGHR-LPIARVFYVNLKMNVLIVSYRGYGKSEGSP 124 (300)
T ss_pred ccCCCceEEEEEcCcceeEeeeeecccC---CCceEEEEccCCCcccch-hhHHHHHHHHcCceEEEEEeeccccCCCCc
Confidence 3488999999999999999987776443 599999999999998733 34555443 447899999999999999865
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhH
Q 035721 105 AHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLL 183 (308)
Q Consensus 105 ~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 183 (308)
. -+.+.-|..++++++..+.. +..+++++|.|+||.+|+.+|++..+++.++|+-+++...+....+-...
T Consensus 125 s----E~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p---- 196 (300)
T KOG4391|consen 125 S----EEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFP---- 196 (300)
T ss_pred c----ccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheecc----
Confidence 3 34456688889999988765 78899999999999999999999999999999999876653221110000
Q ss_pred HHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcc
Q 035721 184 FTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVV 263 (308)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 263 (308)
...+.+ .... .+........+...+.|.|++.|.+|.+
T Consensus 197 -~~~k~i------------~~lc-----------------------------~kn~~~S~~ki~~~~~P~LFiSGlkDel 234 (300)
T KOG4391|consen 197 -FPMKYI------------PLLC-----------------------------YKNKWLSYRKIGQCRMPFLFISGLKDEL 234 (300)
T ss_pred -chhhHH------------HHHH-----------------------------HHhhhcchhhhccccCceEEeecCcccc
Confidence 000000 0000 0000111233446688999999999999
Q ss_pred cChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 264 CDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
+||..++++++.+++...++..+|++.|+-.
T Consensus 235 VPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT 265 (300)
T KOG4391|consen 235 VPPVMMRQLYELCPSRTKRLAEFPDGTHNDT 265 (300)
T ss_pred CCcHHHHHHHHhCchhhhhheeCCCCccCce
Confidence 9999999999999888899999999999866
No 53
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.93 E-value=4.1e-26 Score=157.60 Aligned_cols=237 Identities=19% Similarity=0.170 Sum_probs=157.3
Q ss_pred EcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHc-CCeEEEecCCCCcCCCCccccCCCcchHHH
Q 035721 37 TNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKS-GFATCAIDHQGHGFSDGLVAHIPDLNPVVE 115 (308)
Q Consensus 37 ~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 115 (308)
...+|..|.|..++..+. .|++++|.-++....|.+....|.+. .+.++++|.||+|.|.++.... ..+-+.+
T Consensus 26 v~vng~ql~y~~~G~G~~-----~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf-~~~ff~~ 99 (277)
T KOG2984|consen 26 VHVNGTQLGYCKYGHGPN-----YILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKF-EVQFFMK 99 (277)
T ss_pred eeecCceeeeeecCCCCc-----eeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccc-hHHHHHH
Confidence 356899999999886543 58999998877654455544444332 4899999999999998876652 4444444
Q ss_pred ---HHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCC
Q 035721 116 ---DAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPT 192 (308)
Q Consensus 116 ---d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (308)
+...+++.++.+ ++.++|+|-||..|+..|+++++.|..+|+.++......... .....++...++.+.
T Consensus 100 Da~~avdLM~aLk~~-----~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~---ma~kgiRdv~kWs~r 171 (277)
T KOG2984|consen 100 DAEYAVDLMEALKLE-----PFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGA---MAFKGIRDVNKWSAR 171 (277)
T ss_pred hHHHHHHHHHHhCCC-----CeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhH---HHHhchHHHhhhhhh
Confidence 444555555555 999999999999999999999999999999888655442211 011111111111111
Q ss_pred cccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH------HHhhhhcCCCCcceEEEeeCCCcccCh
Q 035721 193 WRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS------RDLQGRFEEVEVPMLICHGGDDVVCDP 266 (308)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~P~l~i~g~~D~~~~~ 266 (308)
.+..... .+....+...+ ....+..... .-.+..+++++||++|++|++|++++.
T Consensus 172 ~R~P~e~-~Yg~e~f~~~w------------------a~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~ 232 (277)
T KOG2984|consen 172 GRQPYED-HYGPETFRTQW------------------AAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGD 232 (277)
T ss_pred hcchHHH-hcCHHHHHHHH------------------HHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCC
Confidence 1110000 00011111111 1111111111 123456889999999999999999998
Q ss_pred HHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhcC
Q 035721 267 ACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGEM 308 (308)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~i 308 (308)
..+.-+.... +.+++.+.|.++|.++ ..+++|+..+.+++
T Consensus 233 ~hv~fi~~~~--~~a~~~~~peGkHn~hLrya~eFnklv~dFl 273 (277)
T KOG2984|consen 233 PHVCFIPVLK--SLAKVEIHPEGKHNFHLRYAKEFNKLVLDFL 273 (277)
T ss_pred CCccchhhhc--ccceEEEccCCCcceeeechHHHHHHHHHHH
Confidence 8888777777 6799999999999999 99999999988764
No 54
>PLN02872 triacylglycerol lipase
Probab=99.93 E-value=4e-25 Score=177.38 Aligned_cols=276 Identities=13% Similarity=0.097 Sum_probs=168.4
Q ss_pred ccccccccccceeEEcCCCcEEEEEEecCCC---CCCCcceEEEEccCCCccchHH-----HHHHHHHHHcCCeEEEecC
Q 035721 23 FYARHSVSHSSEYITNSRGLRLFTQWWTPLP---PAKTLGVLCVVHGFTGESSWIV-----QLTAVLFAKSGFATCAIDH 94 (308)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~---~~~~~~~vv~~hG~~~~~~~~~-----~~~~~~l~~~g~~v~~~d~ 94 (308)
+....+++.++..+++.||..|...+..+.. +..++|+|+++||+++++..|. +.++..|+++||+|+++|+
T Consensus 36 ~i~~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~ 115 (395)
T PLN02872 36 LIHPAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNV 115 (395)
T ss_pred HHHHcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccc
Confidence 3455689999999999999999987764332 1134689999999987766321 3566778899999999999
Q ss_pred CCCcCCCCc-------cc-cCCCcchHH-HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC---CccEEEE
Q 035721 95 QGHGFSDGL-------VA-HIPDLNPVV-EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG---AWDGLIL 162 (308)
Q Consensus 95 ~G~G~s~~~-------~~-~~~~~~~~~-~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl 162 (308)
||++.|.+. .. ..+++++++ .|+.++++++... ...+++++|||+||.+++.++ .+|+ +|+.+++
T Consensus 116 RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~--~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~ 192 (395)
T PLN02872 116 RGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSI--TNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAAL 192 (395)
T ss_pred cccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhc--cCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHH
Confidence 998866331 11 124677777 7999999998754 346999999999999998555 5665 6888999
Q ss_pred eCCcCCCCcCCCCCchhhhhHH----HhhhhCCCcccccCCCCCCC----cccc-------------------cHHHHHH
Q 035721 163 NGAMCGISQKFKPPWPLEHLLF----TVAWLVPTWRVVPTRGSLPM----VSFK-------------------EEWKRKL 215 (308)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~----~~~~-------------------~~~~~~~ 215 (308)
++|.........+. ...+.. .+...+....+.+.. .... ..+. +......
T Consensus 193 l~P~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~ 269 (395)
T PLN02872 193 LCPISYLDHVTAPL--VLRMVFMHLDQMVVAMGIHQLNFRS-DVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDY 269 (395)
T ss_pred hcchhhhccCCCHH--HHHHHHHhHHHHHHHhcCceecCCc-HHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhH
Confidence 99876543211111 000000 000001100000000 0000 0000 0000000
Q ss_pred HhhCCCCCCCcchHHHHHHHHHHH----------------------HHhhhhcCCC--CcceEEEeeCCCcccChHHHHH
Q 035721 216 ALSSPRRPVARPRAATALELLRVS----------------------RDLQGRFEEV--EVPMLICHGGDDVVCDPACVEE 271 (308)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~i--~~P~l~i~g~~D~~~~~~~~~~ 271 (308)
+... .....+.+....+.... ....-.++++ ++|+++++|++|.+++++.++.
T Consensus 270 ~~~~---~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~ 346 (395)
T PLN02872 270 YLEY---EPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEH 346 (395)
T ss_pred HHhc---CCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHH
Confidence 0000 00001111111111100 0111135666 5899999999999999999999
Q ss_pred HHHHhcCCCCcEEEecCCccc---cc-CCchhhHHHhhhcC
Q 035721 272 LYKRAASKDKTLSIYPGMWHQ---LI-GEPEENVELVFGEM 308 (308)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~gH~---~~-~~~~~~~~~i~~~i 308 (308)
+.+.++. .++++.++++||. .. +.|+++.+.|++++
T Consensus 347 l~~~Lp~-~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL 386 (395)
T PLN02872 347 TLAELPS-KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFF 386 (395)
T ss_pred HHHHCCC-ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHH
Confidence 9999853 3688899999995 34 77888888887753
No 55
>PRK10566 esterase; Provisional
Probab=99.92 E-value=1.6e-23 Score=161.36 Aligned_cols=197 Identities=21% Similarity=0.180 Sum_probs=124.3
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCc-------chHHHHHHHHHHHHHHhc
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDL-------NPVVEDAISFFDSFRARH 128 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~-------~~~~~d~~~~l~~~~~~~ 128 (308)
++.|+||++||++++.. .+..+++.|+++||.|+++|+||+|.+...... ..+ ....+|+.++++++....
T Consensus 25 ~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 102 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKL-VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEA-RRLNHFWQILLQNMQEFPTLRAAIREEG 102 (249)
T ss_pred CCCCEEEEeCCCCcccc-hHHHHHHHHHhCCCEEEEecCCcccccCCCccc-cchhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45789999999988876 567899999999999999999999976432111 111 123466777777776543
Q ss_pred C-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCccc
Q 035721 129 A-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSF 207 (308)
Q Consensus 129 ~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (308)
. +.++++++|||+||.+++.++.++|+....++++++... ..... ...+.. . ....
T Consensus 103 ~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~-----------~~~~~---~~~~~~-----~--~~~~-- 159 (249)
T PRK10566 103 WLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYF-----------TSLAR---TLFPPL-----I--PETA-- 159 (249)
T ss_pred CcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHH-----------HHHHH---Hhcccc-----c--cccc--
Confidence 2 567999999999999999999988863333444433110 00000 000000 0 0000
Q ss_pred ccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCC-CcceEEEeeCCCcccChHHHHHHHHHhcCC----CCc
Q 035721 208 KEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEV-EVPMLICHGGDDVVCDPACVEELYKRAASK----DKT 282 (308)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----~~~ 282 (308)
..... .......... .+....+.++ ++|+|+++|++|.+++++.++.+.+.++.. +++
T Consensus 160 ~~~~~----------------~~~~~~~~~~-~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~ 222 (249)
T PRK10566 160 AQQAE----------------FNNIVAPLAE-WEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLT 222 (249)
T ss_pred ccHHH----------------HHHHHHHHhh-cChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceE
Confidence 00000 0000000000 1122334555 689999999999999999999999988542 367
Q ss_pred EEEecCCccccc
Q 035721 283 LSIYPGMWHQLI 294 (308)
Q Consensus 283 ~~~~~~~gH~~~ 294 (308)
++.++++||.+.
T Consensus 223 ~~~~~~~~H~~~ 234 (249)
T PRK10566 223 CLWEPGVRHRIT 234 (249)
T ss_pred EEecCCCCCccC
Confidence 888999999876
No 56
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.92 E-value=1.2e-23 Score=169.18 Aligned_cols=256 Identities=13% Similarity=0.012 Sum_probs=149.7
Q ss_pred EEEEecCCCCCCCcceEEEEccCCCccchH----HHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHH-HHHH
Q 035721 45 FTQWWTPLPPAKTLGVLCVVHGFTGESSWI----VQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVE-DAIS 119 (308)
Q Consensus 45 ~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~----~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~-d~~~ 119 (308)
....+.+......+++||++||+..+...+ ++.+++.|.++||+|+++|++|+|.|+.. .++++++. ++.+
T Consensus 49 ~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~----~~~~d~~~~~~~~ 124 (350)
T TIGR01836 49 VLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY----LTLDDYINGYIDK 124 (350)
T ss_pred EEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc----CCHHHHHHHHHHH
Confidence 333455543323456799999975443211 35799999999999999999999976532 36677764 4788
Q ss_pred HHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhh---hHHHhhh--hCCCcc
Q 035721 120 FFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH---LLFTVAW--LVPTWR 194 (308)
Q Consensus 120 ~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~ 194 (308)
+++.+.... +..+++++||||||.+++.++..+|++++++|+++++..+............ ....... .++...
T Consensus 125 ~v~~l~~~~-~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 203 (350)
T TIGR01836 125 CVDYICRTS-KLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGEL 203 (350)
T ss_pred HHHHHHHHh-CCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHH
Confidence 888887654 5568999999999999999999999999999999988765432110000000 0000000 000000
Q ss_pred -------cccCCCCCCC------cccccHHHHHHHhh--CCCCCCCcchHHHHHHHHHHH---HH----------hhhhc
Q 035721 195 -------VVPTRGSLPM------VSFKEEWKRKLALS--SPRRPVARPRAATALELLRVS---RD----------LQGRF 246 (308)
Q Consensus 195 -------~~~~~~~~~~------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~----------~~~~~ 246 (308)
..+.. .... ....++.....+.. ...............++.... .. ....+
T Consensus 204 ~~~~f~~l~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l 282 (350)
T TIGR01836 204 LNLTFLMLKPFS-LGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDL 282 (350)
T ss_pred HHHHHHhcCcch-hhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccH
Confidence 00000 0000 00011111100000 000000011111222222111 00 01235
Q ss_pred CCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCc---hhhHHHhhhc
Q 035721 247 EEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEP---EENVELVFGE 307 (308)
Q Consensus 247 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~---~~~~~~i~~~ 307 (308)
.++++|+++++|++|.++|++.++.+.+.+++.+.++++++ +||... .++ +++...+.++
T Consensus 283 ~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~w 346 (350)
T TIGR01836 283 KNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKW 346 (350)
T ss_pred HhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHH
Confidence 67899999999999999999999999999865567788887 789887 443 5666666654
No 57
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.92 E-value=3.9e-23 Score=149.94 Aligned_cols=213 Identities=18% Similarity=0.179 Sum_probs=155.2
Q ss_pred ccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHH-cCCeEEEecCCCCcCCCCccccCCC
Q 035721 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAK-SGFATCAIDHQGHGFSDGLVAHIPD 109 (308)
Q Consensus 31 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~ 109 (308)
.+.....+..|..+....+.+... ..+++++.||...+.... ..+...|.. -+++|+.+|++|+|.|.+.+..
T Consensus 35 v~v~~~~t~rgn~~~~~y~~~~~~--~~~~lly~hGNa~Dlgq~-~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE--- 108 (258)
T KOG1552|consen 35 VEVFKVKTSRGNEIVCMYVRPPEA--AHPTLLYSHGNAADLGQM-VELFKELSIFLNCNVVSYDYSGYGRSSGKPSE--- 108 (258)
T ss_pred cceEEeecCCCCEEEEEEEcCccc--cceEEEEcCCcccchHHH-HHHHHHHhhcccceEEEEecccccccCCCccc---
Confidence 344556677777776666666543 468999999996665523 234444444 2699999999999999987643
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhh
Q 035721 110 LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWL 189 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (308)
....+|+.++.++++...++.++++++|+|+|+..++.+|.+.| ++++||.+|.........+
T Consensus 109 -~n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~-------------- 171 (258)
T KOG1552|consen 109 -RNLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFP-------------- 171 (258)
T ss_pred -ccchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhcc--------------
Confidence 35678999999999988534689999999999999999999998 9999999996542211100
Q ss_pred CCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHH
Q 035721 190 VPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACV 269 (308)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~ 269 (308)
..... ..-+ . ....+..+.+++|+|++||++|.+++....
T Consensus 172 --~~~~~---------~~~d-----~------------------------f~~i~kI~~i~~PVLiiHgtdDevv~~sHg 211 (258)
T KOG1552|consen 172 --DTKTT---------YCFD-----A------------------------FPNIEKISKITCPVLIIHGTDDEVVDFSHG 211 (258)
T ss_pred --CcceE---------Eeec-----c------------------------ccccCcceeccCCEEEEecccCceeccccc
Confidence 00000 0000 0 111355678899999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEecCCcccccCCchhhHHHhhhc
Q 035721 270 EELYKRAASKDKTLSIYPGMWHQLIGEPEENVELVFGE 307 (308)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~~ 307 (308)
.++++.++. ..+..++.|+||.-.+...++.+.+.++
T Consensus 212 ~~Lye~~k~-~~epl~v~g~gH~~~~~~~~yi~~l~~f 248 (258)
T KOG1552|consen 212 KALYERCKE-KVEPLWVKGAGHNDIELYPEYIEHLRRF 248 (258)
T ss_pred HHHHHhccc-cCCCcEEecCCCcccccCHHHHHHHHHH
Confidence 999999964 3688999999999886555566665543
No 58
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.91 E-value=1e-22 Score=143.61 Aligned_cols=145 Identities=30% Similarity=0.449 Sum_probs=115.8
Q ss_pred eEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEe
Q 035721 60 VLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSE 139 (308)
Q Consensus 60 ~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~ 139 (308)
+||++||++++.. .+..+++.|+++||.|+.+|+|++|.+.. ..++.++++.+.....+..+++++||
T Consensus 1 ~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~i~l~G~ 68 (145)
T PF12695_consen 1 VVVLLHGWGGSRR-DYQPLAEALAEQGYAVVAFDYPGHGDSDG-----------ADAVERVLADIRAGYPDPDRIILIGH 68 (145)
T ss_dssp EEEEECTTTTTTH-HHHHHHHHHHHTTEEEEEESCTTSTTSHH-----------SHHHHHHHHHHHHHHCTCCEEEEEEE
T ss_pred CEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEecCCCCccch-----------hHHHHHHHHHHHhhcCCCCcEEEEEE
Confidence 5899999999876 56899999999999999999999998722 12445555544221115679999999
Q ss_pred chhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhC
Q 035721 140 SLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSS 219 (308)
Q Consensus 140 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (308)
|+||.+++.++.+. .+++++|++++...
T Consensus 69 S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~--------------------------------------------------- 96 (145)
T PF12695_consen 69 SMGGAIAANLAARN-PRVKAVVLLSPYPD--------------------------------------------------- 96 (145)
T ss_dssp THHHHHHHHHHHHS-TTESEEEEESESSG---------------------------------------------------
T ss_pred ccCcHHHHHHhhhc-cceeEEEEecCccc---------------------------------------------------
Confidence 99999999999988 68999999998200
Q ss_pred CCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccc
Q 035721 220 PRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQ 292 (308)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 292 (308)
.+.+.+.++|+++++|++|..++++..+.+++.++ .+.+++++++++|+
T Consensus 97 -----------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 -----------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP-GPKELYIIPGAGHF 145 (145)
T ss_dssp -----------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC-SSEEEEEETTS-TT
T ss_pred -----------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC-CCcEEEEeCCCcCc
Confidence 13345667799999999999999999999999996 46899999999995
No 59
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.91 E-value=2.3e-22 Score=140.57 Aligned_cols=234 Identities=20% Similarity=0.273 Sum_probs=149.8
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchH
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPV 113 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 113 (308)
.+....+.++....... .+..++|++||+-++.. .+...++..|.+.|+.++.+|++|.|+|.+.-.+ ......
T Consensus 14 vi~n~~ne~lvg~lh~t----gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~-Gn~~~e 88 (269)
T KOG4667|consen 14 VIPNSRNEKLVGLLHET----GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY-GNYNTE 88 (269)
T ss_pred EeccCCCchhhcceecc----CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc-Ccccch
Confidence 34444454544433222 23678999999988765 3456789999999999999999999999886554 255666
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCc
Q 035721 114 VEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTW 193 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (308)
++|+..+++++... ...--+++|||-||.+++.++.++++ ++-+|.+++......... .+.....+.++..- ..+
T Consensus 89 adDL~sV~q~~s~~--nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~-eRlg~~~l~~ike~-Gfi 163 (269)
T KOG4667|consen 89 ADDLHSVIQYFSNS--NRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGIN-ERLGEDYLERIKEQ-GFI 163 (269)
T ss_pred HHHHHHHHHHhccC--ceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchh-hhhcccHHHHHHhC-Cce
Confidence 79999999999865 22233589999999999999999987 888888877544321110 00111111111100 000
Q ss_pred ccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCC--CcceEEEeeCCCcccChHHHHH
Q 035721 194 RVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEV--EVPMLICHGGDDVVCDPACVEE 271 (308)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~P~l~i~g~~D~~~~~~~~~~ 271 (308)
...+....+.. ....... +.+...++.+...+| +||||-++|..|.++|.+.+.+
T Consensus 164 d~~~rkG~y~~---------------------rvt~eSl--mdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~Ake 220 (269)
T KOG4667|consen 164 DVGPRKGKYGY---------------------RVTEESL--MDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKE 220 (269)
T ss_pred ecCcccCCcCc---------------------eecHHHH--HHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHH
Confidence 00000000000 0001111 111113444444445 8999999999999999999999
Q ss_pred HHHHhcCCCCcEEEecCCcccccCCchhhHHH
Q 035721 272 LYKRAASKDKTLSIYPGMWHQLIGEPEENVEL 303 (308)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 303 (308)
+++.+ ++.++.++||+.|....+..+....
T Consensus 221 fAk~i--~nH~L~iIEgADHnyt~~q~~l~~l 250 (269)
T KOG4667|consen 221 FAKII--PNHKLEIIEGADHNYTGHQSQLVSL 250 (269)
T ss_pred HHHhc--cCCceEEecCCCcCccchhhhHhhh
Confidence 99999 6789999999999998444434433
No 60
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.90 E-value=4.2e-22 Score=149.57 Aligned_cols=263 Identities=16% Similarity=0.143 Sum_probs=161.0
Q ss_pred ccccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc
Q 035721 27 HSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA 105 (308)
Q Consensus 27 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 105 (308)
..+.+....+.++||..+-..+..++.. ..+|.||++||+.|++. .|.+.+.+.+.++||.|+++++|||+.+.....
T Consensus 45 ~~~~~~re~v~~pdg~~~~ldw~~~p~~-~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p 123 (345)
T COG0429 45 PKVAYTRERLETPDGGFIDLDWSEDPRA-AKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSP 123 (345)
T ss_pred cccccceEEEEcCCCCEEEEeeccCccc-cCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCc
Confidence 4566677788999998877766665433 56789999999987764 577899999999999999999999999876433
Q ss_pred cCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC--CccEEEEeCCcCCCCcC---CCCCch--
Q 035721 106 HIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG--AWDGLILNGAMCGISQK---FKPPWP-- 178 (308)
Q Consensus 106 ~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~---~~~~~~-- 178 (308)
..+. ..+.+|+..++++++... .+.++..+|.|+||.+...+..+..+ .+.+.+.++.+..+... ....+.
T Consensus 124 ~~yh-~G~t~D~~~~l~~l~~~~-~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ 201 (345)
T COG0429 124 RLYH-SGETEDIRFFLDWLKARF-PPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLR 201 (345)
T ss_pred ceec-ccchhHHHHHHHHHHHhC-CCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhh
Confidence 3322 333599999999998865 78899999999999655555544332 34555555544332110 011111
Q ss_pred --hhhhHHHhhhhCCCcccccCCCCCCCcc-cccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEE
Q 035721 179 --LEHLLFTVAWLVPTWRVVPTRGSLPMVS-FKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLI 255 (308)
Q Consensus 179 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~ 255 (308)
...+...+.+........... ...... ..-........-+.........+....++++. ....+.+++|.+|+++
T Consensus 202 ly~r~l~~~L~~~~~~kl~~l~~-~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~-aSs~~~L~~Ir~PtLi 279 (345)
T COG0429 202 LYSRYLLRNLKRNAARKLKELEP-SLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQ-ASSLPLLPKIRKPTLI 279 (345)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCc-ccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHh-ccccccccccccceEE
Confidence 111111111111110000000 000000 00000011111122222222334444455544 3345778999999999
Q ss_pred EeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-C
Q 035721 256 CHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-G 295 (308)
Q Consensus 256 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~ 295 (308)
|++.+|++++++..-...... ++++.+..-+.+||.-+ .
T Consensus 280 i~A~DDP~~~~~~iP~~~~~~-np~v~l~~t~~GGHvGfl~ 319 (345)
T COG0429 280 INAKDDPFMPPEVIPKLQEML-NPNVLLQLTEHGGHVGFLG 319 (345)
T ss_pred EecCCCCCCChhhCCcchhcC-CCceEEEeecCCceEEecc
Confidence 999999999987766655533 37899999999999988 5
No 61
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.90 E-value=1.1e-24 Score=166.14 Aligned_cols=210 Identities=19% Similarity=0.211 Sum_probs=129.7
Q ss_pred CeEEEecCCCCcCCCC---ccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEe
Q 035721 87 FATCAIDHQGHGFSDG---LVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILN 163 (308)
Q Consensus 87 ~~v~~~d~~G~G~s~~---~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~ 163 (308)
|+|+++|+||+|.|++ .....++.+++++++..+++.++.+ +++++||||||.+++.++.++|++|+++|++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~ 75 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIK-----KINLVGHSMGGMLALEYAAQYPERVKKLVLI 75 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTS-----SEEEEEETHHHHHHHHHHHHSGGGEEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCC-----CeEEEEECCChHHHHHHHHHCchhhcCcEEE
Confidence 6899999999999996 4445568888999999999988877 8999999999999999999999999999999
Q ss_pred CCcC----CCCcCCCCC-chhhhhHHHhhh-hCCCcccccCCCCCC--CcccccH----HHHHHHhhCCCCCCCcchHHH
Q 035721 164 GAMC----GISQKFKPP-WPLEHLLFTVAW-LVPTWRVVPTRGSLP--MVSFKEE----WKRKLALSSPRRPVARPRAAT 231 (308)
Q Consensus 164 ~~~~----~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 231 (308)
++.. ......... ............ ......... . ... ....... .....................
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (230)
T PF00561_consen 76 SPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLL-G-RWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDN 153 (230)
T ss_dssp SESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHH
T ss_pred eeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhh-h-hhhhheeeccCccccchhhccchhhhhHHHHHHHHhh
Confidence 9852 100000000 000000000000 000000000 0 000 0000000 000000000000000000000
Q ss_pred H---HHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhh
Q 035721 232 A---LELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVF 305 (308)
Q Consensus 232 ~---~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~ 305 (308)
. ........+....+.++++|+++++|++|.++|++....+.+.+ ++.++++++++||+.+ ++|+++.+.|.
T Consensus 154 ~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 154 MFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLI--PNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHS--TTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred hccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhc--CCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 0 01111123445667889999999999999999999999988888 6799999999999999 99999988775
No 62
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.90 E-value=3.2e-21 Score=159.16 Aligned_cols=247 Identities=11% Similarity=0.028 Sum_probs=145.6
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCccchHH-----HHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHH-H
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIV-----QLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVE-D 116 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~-d 116 (308)
.+....|.|......+++||++||+..... .+ +.+++.|.++||+|+++|++|+|.+.... ++++++. +
T Consensus 173 ~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~y-ilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~----~~ddY~~~~ 247 (532)
T TIGR01838 173 LFQLIQYEPTTETVHKTPLLIVPPWINKYY-ILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADK----TFDDYIRDG 247 (532)
T ss_pred cEEEEEeCCCCCcCCCCcEEEECcccccce-eeecccchHHHHHHHHCCcEEEEEECCCCCcccccC----ChhhhHHHH
Confidence 455555666654345789999999875543 33 37999999999999999999999885532 3445553 4
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEechhhHHHH----HHHHhc-CCCccEEEEeCCcCCCCcCCCCCchh-hhhHHHhhhh-
Q 035721 117 AISFFDSFRARHAPDLPAFLYSESLGGAIAL----YITLRQ-KGAWDGLILNGAMCGISQKFKPPWPL-EHLLFTVAWL- 189 (308)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~----~~a~~~-p~~v~~~vl~~~~~~~~~~~~~~~~~-~~~~~~~~~~- 189 (308)
+.+.++.+.... +..+++++|||+||.++. .++... +++|++++++++...+........+. ......+...
T Consensus 248 i~~al~~v~~~~-g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~ 326 (532)
T TIGR01838 248 VIAALEVVEAIT-GEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQN 326 (532)
T ss_pred HHHHHHHHHHhc-CCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHH
Confidence 666666665432 455899999999999852 345555 78899999999987765422111110 0011111111
Q ss_pred -----CCCcccccCCCCCCC--cccccHHHHHHHhhCCC-------CC---CCcchHHHHHHHHHHH---H---------
Q 035721 190 -----VPTWRVVPTRGSLPM--VSFKEEWKRKLALSSPR-------RP---VARPRAATALELLRVS---R--------- 240 (308)
Q Consensus 190 -----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~~~~~~---~--------- 240 (308)
++........ .+.+ ....+.... .+..... .+ ..........++++.. .
T Consensus 327 ~~~G~lpg~~m~~~F-~~lrp~~l~w~~~v~-~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v 404 (532)
T TIGR01838 327 GGGGYLDGRQMAVTF-SLLRENDLIWNYYVD-NYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEV 404 (532)
T ss_pred HhcCCCCHHHHHHHH-HhcChhhHHHHHHHH-HHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEE
Confidence 1110000000 0000 000000000 0111000 00 0111222222222111 0
Q ss_pred -HhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchh
Q 035721 241 -DLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEE 299 (308)
Q Consensus 241 -~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~ 299 (308)
+....+.+|++|+++++|++|.++|++.+..+.+.+ ++.+.++++++||..+ ++|..
T Consensus 405 ~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i--~~~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 405 CGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALL--GGPKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred CCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHC--CCCEEEEECCCCCchHhhCCCC
Confidence 112357789999999999999999999999998888 4678889999999999 87753
No 63
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.89 E-value=2.4e-21 Score=150.94 Aligned_cols=264 Identities=17% Similarity=0.147 Sum_probs=165.8
Q ss_pred cccccccceeEEcCCCcEEEEEEecCCCC-----CCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcC
Q 035721 26 RHSVSHSSEYITNSRGLRLFTQWWTPLPP-----AKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGF 99 (308)
Q Consensus 26 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~-----~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~ 99 (308)
...+.++...+++.||..+.+.+..+... ....|+||++||+.+++. .+.+.++..+.++||+|++++.||+|.
T Consensus 88 ~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g 167 (409)
T KOG1838|consen 88 KPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGG 167 (409)
T ss_pred CCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCC
Confidence 34667888999999999999988755443 135799999999987764 577888999999999999999999999
Q ss_pred CCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC---CccEEEEeCCcCCC--CcCCC
Q 035721 100 SDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG---AWDGLILNGAMCGI--SQKFK 174 (308)
Q Consensus 100 s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~--~~~~~ 174 (308)
+.-.....++ ..+.+|+.+++++++.++ +..++..+|.||||++.+.|..+..+ .+.++++++|+-.+ .....
T Consensus 168 ~~LtTpr~f~-ag~t~Dl~~~v~~i~~~~-P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~ 245 (409)
T KOG1838|consen 168 SKLTTPRLFT-AGWTEDLREVVNHIKKRY-PQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIE 245 (409)
T ss_pred CccCCCceee-cCCHHHHHHHHHHHHHhC-CCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHh
Confidence 8765444333 345799999999999988 77899999999999999999987654 35666666665432 11111
Q ss_pred CCchhhhhHHH----hhhhCCCccc-ccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCC
Q 035721 175 PPWPLEHLLFT----VAWLVPTWRV-VPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEV 249 (308)
Q Consensus 175 ~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 249 (308)
........... +.......+. ............+....++..........+... ..++++. ......+.+|
T Consensus 246 ~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~---~deYY~~-aSs~~~v~~I 321 (409)
T KOG1838|consen 246 TPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKS---VDEYYKK-ASSSNYVDKI 321 (409)
T ss_pred cccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCc---HHHHHhh-cchhhhcccc
Confidence 11001111111 1111111110 000000011111111122221111111222222 2223332 2345668899
Q ss_pred CcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CC
Q 035721 250 EVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GE 296 (308)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~ 296 (308)
++|+++|++.+|+++|.+. ....+...++++-+++-..+||.-+ +.
T Consensus 322 ~VP~L~ina~DDPv~p~~~-ip~~~~~~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 322 KVPLLCINAADDPVVPEEA-IPIDDIKSNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred cccEEEEecCCCCCCCccc-CCHHHHhcCCcEEEEEeCCCceeeeecc
Confidence 9999999999999998753 3333333447888888889999988 55
No 64
>PRK11071 esterase YqiA; Provisional
Probab=99.89 E-value=7.9e-22 Score=143.78 Aligned_cols=183 Identities=15% Similarity=0.071 Sum_probs=116.8
Q ss_pred ceEEEEccCCCccchHH-HHHHHHHHHc--CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEE
Q 035721 59 GVLCVVHGFTGESSWIV-QLTAVLFAKS--GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~-~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~ 135 (308)
|+||++||++++...+. ..+.+.+.+. +|+|+++|+||++ ++.++++.++++.+..+ +++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~~~~-----~~~ 64 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEHGGD-----PLG 64 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHcCCC-----CeE
Confidence 57999999999887332 2355666553 6999999999985 24567777777765554 999
Q ss_pred EEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHH
Q 035721 136 LYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKL 215 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (308)
++|||+||.+++.+|.++|. .+|+++|..... . .+......... . ..........
T Consensus 65 lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~~---------~----~~~~~~~~~~~-~---~~~~~~~~~~----- 119 (190)
T PRK11071 65 LVGSSLGGYYATWLSQCFML---PAVVVNPAVRPF---------E----LLTDYLGENEN-P---YTGQQYVLES----- 119 (190)
T ss_pred EEEECHHHHHHHHHHHHcCC---CEEEECCCCCHH---------H----HHHHhcCCccc-c---cCCCcEEEcH-----
Confidence 99999999999999999983 467888854311 0 11111110000 0 0000000000
Q ss_pred HhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCcccccC
Q 035721 216 ALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIG 295 (308)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 295 (308)
....+... .+. ..+. ..+|+++++|++|.++|++.+.++++. ++.++++|++|.+..
T Consensus 120 --------------~~~~d~~~--~~~-~~i~-~~~~v~iihg~~De~V~~~~a~~~~~~-----~~~~~~~ggdH~f~~ 176 (190)
T PRK11071 120 --------------RHIYDLKV--MQI-DPLE-SPDLIWLLQQTGDEVLDYRQAVAYYAA-----CRQTVEEGGNHAFVG 176 (190)
T ss_pred --------------HHHHHHHh--cCC-ccCC-ChhhEEEEEeCCCCcCCHHHHHHHHHh-----cceEEECCCCcchhh
Confidence 00000000 011 1133 677889999999999999999999885 356788999999862
Q ss_pred CchhhHHHhhhc
Q 035721 296 EPEENVELVFGE 307 (308)
Q Consensus 296 ~~~~~~~~i~~~ 307 (308)
. ++..+.+.++
T Consensus 177 ~-~~~~~~i~~f 187 (190)
T PRK11071 177 F-ERYFNQIVDF 187 (190)
T ss_pred H-HHhHHHHHHH
Confidence 2 6667776664
No 65
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.89 E-value=3.2e-22 Score=171.17 Aligned_cols=240 Identities=14% Similarity=0.083 Sum_probs=157.7
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCc--ceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCc-
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTL--GVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGL- 103 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~--~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~- 103 (308)
-...+...+...||.+|++..+.|.+..+.+ |+||++||.+.... +.+....+.|+.+||.|+.+++||.+.-...
T Consensus 362 ~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F 441 (620)
T COG1506 362 LAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREF 441 (620)
T ss_pred cCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHH
Confidence 3456778889999999999999997764333 89999999874433 2345678889999999999999976542211
Q ss_pred --cccCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhh
Q 035721 104 --VAHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLE 180 (308)
Q Consensus 104 --~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~ 180 (308)
.....--....+|+.+.++.+..... +.+++.|.|+|+||++++..+...| ++++.+...+...........
T Consensus 442 ~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~---- 516 (620)
T COG1506 442 ADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGES---- 516 (620)
T ss_pred HHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhcccc----
Confidence 11101223346788888886655433 7789999999999999999999988 677777666643311100000
Q ss_pred hhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCC
Q 035721 181 HLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGD 260 (308)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~ 260 (308)
...+. .........+. . ....+.. ........++++|+|+|||++
T Consensus 517 ---------~~~~~------~~~~~~~~~~~----------~---------~~~~~~~-~sp~~~~~~i~~P~LliHG~~ 561 (620)
T COG1506 517 ---------TEGLR------FDPEENGGGPP----------E---------DREKYED-RSPIFYADNIKTPLLLIHGEE 561 (620)
T ss_pred ---------chhhc------CCHHHhCCCcc----------c---------ChHHHHh-cChhhhhcccCCCEEEEeecC
Confidence 00000 00000000000 0 0000000 122244678999999999999
Q ss_pred CcccChHHHHHHHHHhc--CCCCcEEEecCCccccc--CCchhhHHHhhhc
Q 035721 261 DVVCDPACVEELYKRAA--SKDKTLSIYPGMWHQLI--GEPEENVELVFGE 307 (308)
Q Consensus 261 D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~--~~~~~~~~~i~~~ 307 (308)
|..|+.+++.++.+.+. +.+++++++|+.||.+. ++.....+.++++
T Consensus 562 D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~ 612 (620)
T COG1506 562 DDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDW 612 (620)
T ss_pred CccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHH
Confidence 99999999999999986 35689999999999988 4444455555544
No 66
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.89 E-value=6.3e-22 Score=144.06 Aligned_cols=238 Identities=16% Similarity=0.150 Sum_probs=138.7
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHc-CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKS-GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
+..|.++++||++.+.- .|..++..|..+ ..+|+++|+||||++........+.+.+++|+.++++.+-.+ ...++
T Consensus 72 t~gpil~l~HG~G~S~L-SfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge--~~~~i 148 (343)
T KOG2564|consen 72 TEGPILLLLHGGGSSAL-SFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGE--LPPQI 148 (343)
T ss_pred CCccEEEEeecCcccch-hHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhcc--CCCce
Confidence 56899999999887665 667888888765 567889999999999887776679999999999999988765 66789
Q ss_pred EEEEechhhHHHHHHHHh--cCCCccEEEEeCCcCCCCcCC---------CCCchhhhhHHHhhhhCCCcccccCCCCCC
Q 035721 135 FLYSESLGGAIALYITLR--QKGAWDGLILNGAMCGISQKF---------KPPWPLEHLLFTVAWLVPTWRVVPTRGSLP 203 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (308)
++|||||||.||.+.|.. -|. +.|+++++-.-+..-.. ..+.........+.+........ ...
T Consensus 149 ilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtAmeAL~~m~~fL~~rP~~F~Si~~Ai~W~v~sg~~R----n~~ 223 (343)
T KOG2564|consen 149 ILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTAMEALNSMQHFLRNRPKSFKSIEDAIEWHVRSGQLR----NRD 223 (343)
T ss_pred EEEeccccchhhhhhhhhhhchh-hhceEEEEEechHHHHHHHHHHHHHhcCCccccchhhHHHHHhcccccc----ccc
Confidence 999999999999887764 354 88999887643211000 00000000000111100000000 000
Q ss_pred CcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHH-HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCc
Q 035721 204 MVSFKEEWKRKLALSSPRRPVARPRAATALELLRVS-RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKT 282 (308)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 282 (308)
.....-+....... .-..+.....+.....+...+ ..+...+-...+|-++|....|..-.--..-+ .+ -..+
T Consensus 224 SArVsmP~~~~~~~-eGh~yvwrtdL~kte~YW~gWF~gLS~~Fl~~p~~klLilAg~d~LDkdLtiGQ----MQ-Gk~Q 297 (343)
T KOG2564|consen 224 SARVSMPSQLKQCE-EGHCYVWRTDLEKTEQYWKGWFKGLSDKFLGLPVPKLLILAGVDRLDKDLTIGQ----MQ-GKFQ 297 (343)
T ss_pred cceEecchheeecc-CCCcEEEEeeccccchhHHHHHhhhhhHhhCCCccceeEEecccccCcceeeee----ec-ccee
Confidence 00000000000000 000111111222222222221 22334455678898888888776432111111 12 2468
Q ss_pred EEEecCCccccc-CCchhhHHHhhhc
Q 035721 283 LSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 283 ~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
+.+++.+||+.+ +.|..++..+..+
T Consensus 298 ~~vL~~~GH~v~ED~P~kva~~~~~f 323 (343)
T KOG2564|consen 298 LQVLPLCGHFVHEDSPHKVAECLCVF 323 (343)
T ss_pred eeeecccCceeccCCcchHHHHHHHH
Confidence 999999999999 8898888877643
No 67
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.89 E-value=1.1e-21 Score=148.86 Aligned_cols=129 Identities=24% Similarity=0.313 Sum_probs=103.2
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccc---hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcc
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS---WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLN 111 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~---~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 111 (308)
++....| .+....+.|.+. .++++||++||++++.. ..|..+++.|+++||.|+++|+||||.|.+.... .+++
T Consensus 4 ~l~~~~g-~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~-~~~~ 80 (266)
T TIGR03101 4 FLDAPHG-FRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA-ARWD 80 (266)
T ss_pred EecCCCC-cEEEEEecCCCC-CCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc-CCHH
Confidence 4555555 455555655543 45789999999986432 3567789999999999999999999999765443 4677
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 112 PVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
.+++|+..+++.+... +..+++++||||||.+++.++.++|++++++|+++|...
T Consensus 81 ~~~~Dv~~ai~~L~~~--~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 81 VWKEDVAAAYRWLIEQ--GHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred HHHHHHHHHHHHHHhc--CCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 8899999999888765 556999999999999999999999999999999998644
No 68
>PRK11460 putative hydrolase; Provisional
Probab=99.87 E-value=9.4e-21 Score=142.91 Aligned_cols=176 Identities=17% Similarity=0.130 Sum_probs=120.6
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc----------cCC---CcchHHHHHHHHHH
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA----------HIP---DLNPVVEDAISFFD 122 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~----------~~~---~~~~~~~d~~~~l~ 122 (308)
+++++||++||++++.. .|..+++.|...++.+..++.+|...+..... ... ++.+..+.+.++++
T Consensus 14 ~~~~~vIlLHG~G~~~~-~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPV-AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCcEEEEEeCCCCChH-HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 45789999999999987 56789999987766666666666533211100 000 11222334444555
Q ss_pred HHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCC
Q 035721 123 SFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGS 201 (308)
Q Consensus 123 ~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (308)
.+..+.+ +..+++++|||+||.+++.++.++|+.+.+++.+++....
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~-------------------------------- 140 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS-------------------------------- 140 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc--------------------------------
Confidence 5544433 5568999999999999999999999878888876652110
Q ss_pred CCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcC--C
Q 035721 202 LPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAAS--K 279 (308)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~ 279 (308)
.. .......|+++++|++|+++|.+.++++.+.+.. .
T Consensus 141 ~~-----------------------------------------~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~ 179 (232)
T PRK11460 141 LP-----------------------------------------ETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGG 179 (232)
T ss_pred cc-----------------------------------------ccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCC
Confidence 00 0011357999999999999999999999888853 3
Q ss_pred CCcEEEecCCccccc-CCchhhHHHhh
Q 035721 280 DKTLSIYPGMWHQLI-GEPEENVELVF 305 (308)
Q Consensus 280 ~~~~~~~~~~gH~~~-~~~~~~~~~i~ 305 (308)
++++++++++||.+. +.-+...+.+.
T Consensus 180 ~~~~~~~~~~gH~i~~~~~~~~~~~l~ 206 (232)
T PRK11460 180 DVTLDIVEDLGHAIDPRLMQFALDRLR 206 (232)
T ss_pred CeEEEEECCCCCCCCHHHHHHHHHHHH
Confidence 568899999999998 65555554443
No 69
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.85 E-value=5.1e-21 Score=143.55 Aligned_cols=192 Identities=17% Similarity=0.171 Sum_probs=123.8
Q ss_pred HHHHHHHHHcCCeEEEecCCCCcCCCCcccc---CCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHH
Q 035721 76 QLTAVLFAKSGFATCAIDHQGHGFSDGLVAH---IPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITL 151 (308)
Q Consensus 76 ~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~---~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~ 151 (308)
......|+++||.|+.+|+||.+........ ...-...++|+.++++++..... +..++.++|+|+||.+++.++.
T Consensus 4 ~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 4 NWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAAT 83 (213)
T ss_dssp SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHH
T ss_pred eHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhc
Confidence 3456788899999999999998754332111 11223457899999999987755 7789999999999999999999
Q ss_pred hcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHH
Q 035721 152 RQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAAT 231 (308)
Q Consensus 152 ~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (308)
++|++++++|..++............. + ............. .
T Consensus 84 ~~~~~f~a~v~~~g~~d~~~~~~~~~~----------------------------~----~~~~~~~~~~~~~---~--- 125 (213)
T PF00326_consen 84 QHPDRFKAAVAGAGVSDLFSYYGTTDI----------------------------Y----TKAEYLEYGDPWD---N--- 125 (213)
T ss_dssp HTCCGSSEEEEESE-SSTTCSBHHTCC----------------------------H----HHGHHHHHSSTTT---S---
T ss_pred ccceeeeeeeccceecchhcccccccc----------------------------c----ccccccccCccch---h---
Confidence 999999999999987654322110000 0 0000000000000 0
Q ss_pred HHHHHHHHHHhhhhcCC--CCcceEEEeeCCCcccChHHHHHHHHHhcC--CCCcEEEecCCccccc--CCchhhHHHhh
Q 035721 232 ALELLRVSRDLQGRFEE--VEVPMLICHGGDDVVCDPACVEELYKRAAS--KDKTLSIYPGMWHQLI--GEPEENVELVF 305 (308)
Q Consensus 232 ~~~~~~~~~~~~~~~~~--i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~--~~~~~~~~~i~ 305 (308)
...+.. ......+.+ +++|+|+++|++|..||++.+..+++.+.. .+++++++|++||.+. +......+.++
T Consensus 126 -~~~~~~-~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~ 203 (213)
T PF00326_consen 126 -PEFYRE-LSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERIL 203 (213)
T ss_dssp -HHHHHH-HHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHH
T ss_pred -hhhhhh-hccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHH
Confidence 000111 111233444 789999999999999999999999988853 3589999999999665 44444555555
Q ss_pred hc
Q 035721 306 GE 307 (308)
Q Consensus 306 ~~ 307 (308)
++
T Consensus 204 ~f 205 (213)
T PF00326_consen 204 DF 205 (213)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 70
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.85 E-value=1.6e-19 Score=163.08 Aligned_cols=122 Identities=13% Similarity=0.124 Sum_probs=85.3
Q ss_pred EEEEEEecCCCC----CCCcceEEEEccCCCccchHHHH-----HHHHHHHcCCeEEEecCCCCcCCCCcccc-CCCcch
Q 035721 43 RLFTQWWTPLPP----AKTLGVLCVVHGFTGESSWIVQL-----TAVLFAKSGFATCAIDHQGHGFSDGLVAH-IPDLNP 112 (308)
Q Consensus 43 ~l~~~~~~~~~~----~~~~~~vv~~hG~~~~~~~~~~~-----~~~~l~~~g~~v~~~d~~G~G~s~~~~~~-~~~~~~ 112 (308)
.+..+.|.|... ...+++|||+||+..+.. .|+. +.+.|.++||+|+++|+ |.++.+... ..++.+
T Consensus 48 ~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~-~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~ 123 (994)
T PRK07868 48 MYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSAD-MWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLAD 123 (994)
T ss_pred cEEEEEeCCCCccccccCCCCcEEEECCCCCCcc-ceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHH
Confidence 344445555432 134689999999987776 5554 47899999999999994 566554332 235555
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc-CCCccEEEEeCCcCCCC
Q 035721 113 VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ-KGAWDGLILNGAMCGIS 170 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~ 170 (308)
++..+.+.++.+... ...+++++||||||.+++.++..+ +++|+++|++++...+.
T Consensus 124 ~i~~l~~~l~~v~~~--~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~ 180 (994)
T PRK07868 124 HVVALSEAIDTVKDV--TGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTL 180 (994)
T ss_pred HHHHHHHHHHHHHHh--hCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccC
Confidence 555555555554433 334899999999999999988755 56899999988876543
No 71
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.85 E-value=9.5e-19 Score=128.98 Aligned_cols=231 Identities=13% Similarity=0.112 Sum_probs=152.8
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEE
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~ 135 (308)
.+..+||-+||.+|+.. .++.+.+.|.+.|.+++.+++||+|.+++.....++-.+...-+.++++.+.... +++
T Consensus 33 s~~gTVv~~hGsPGSH~-DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~----~~i 107 (297)
T PF06342_consen 33 SPLGTVVAFHGSPGSHN-DFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKG----KLI 107 (297)
T ss_pred CCceeEEEecCCCCCcc-chhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCC----ceE
Confidence 34679999999999887 5689999999999999999999999999988877888888999999999998875 999
Q ss_pred EEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHH
Q 035721 136 LYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKL 215 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (308)
++|||.||-.|+.++..+| ..++++++|..........+........++...++... .+......
T Consensus 108 ~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~~~-------------~~~i~~~~ 172 (297)
T PF06342_consen 108 FLGHSRGCENALQLAVTHP--LHGLVLINPPGLRPHKGIRPLSRMETINYLYDLLPRFI-------------INAIMYFY 172 (297)
T ss_pred EEEeccchHHHHHHHhcCc--cceEEEecCCccccccCcCHHHHHHHHHHHHHHhhHHH-------------HHHHHHHH
Confidence 9999999999999999996 67999999875544333332222222223222222210 00000001
Q ss_pred HhhCCCCC-CCcchHHHHHHHHH----HHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcC------------
Q 035721 216 ALSSPRRP-VARPRAATALELLR----VSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAAS------------ 278 (308)
Q Consensus 216 ~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~------------ 278 (308)
+...-... ...........+.. ......+.+.+-++|+++++|.+|.++..+...+++....+
T Consensus 173 y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~~~~~se 252 (297)
T PF06342_consen 173 YRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNIEKEISE 252 (297)
T ss_pred HHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceeeecCCCh
Confidence 10000000 01111111111111 11233455666679999999999999887766666544321
Q ss_pred -------------CCCcEEEecCCccccc-CCchhhHHHhhh
Q 035721 279 -------------KDKTLSIYPGMWHQLI-GEPEENVELVFG 306 (308)
Q Consensus 279 -------------~~~~~~~~~~~gH~~~-~~~~~~~~~i~~ 306 (308)
.....+.+.+.||+.+ .+++-+++.+..
T Consensus 253 ee~~kI~~~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~i~~ 294 (297)
T PF06342_consen 253 EEKPKILKSFASGQKGASVFFAKDGHFQQKFRADLIAEAIKK 294 (297)
T ss_pred hHHHHHHHHHhcCCceeEEEEecCChHHhHHHHHHHHHHHHH
Confidence 1223456777899999 888877776654
No 72
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.84 E-value=1.5e-19 Score=140.88 Aligned_cols=249 Identities=26% Similarity=0.289 Sum_probs=139.1
Q ss_pred CCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHc--CCeEEEecCCCCcCCCCccccCCCcchHHHHH
Q 035721 40 RGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKS--GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDA 117 (308)
Q Consensus 40 ~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 117 (308)
.+..+.|...+.. .|+++++||++++...+ ......+... .|+++++|+||||.|. .. .+.....++++
T Consensus 8 ~~~~~~~~~~~~~-----~~~i~~~hg~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~ 78 (282)
T COG0596 8 DGVRLAYREAGGG-----GPPLVLLHGFPGSSSVW-RPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDL 78 (282)
T ss_pred CCeEEEEeecCCC-----CCeEEEeCCCCCchhhh-HHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHH
Confidence 3445555554433 44899999999887733 3422333322 1899999999999997 11 12444448888
Q ss_pred HHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCC------chhhhhHHHhhhh-C
Q 035721 118 ISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPP------WPLEHLLFTVAWL-V 190 (308)
Q Consensus 118 ~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~------~~~~~~~~~~~~~-~ 190 (308)
..+++.++.. +++++|||+||.+++.++.++|++++++|++++........... ............. .
T Consensus 79 ~~~~~~~~~~-----~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (282)
T COG0596 79 AALLDALGLE-----KVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDA 153 (282)
T ss_pred HHHHHHhCCC-----ceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccch
Confidence 8888877765 79999999999999999999999999999999865411110000 0000000000000 0
Q ss_pred C----CcccccCCCCCCC-------cccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeC
Q 035721 191 P----TWRVVPTRGSLPM-------VSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGG 259 (308)
Q Consensus 191 ~----~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~ 259 (308)
. ............. ....... ......................... ........++++|+++++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~ 230 (282)
T COG0596 154 AAFAALLAALGLLAALAAAARAGLAEALRAPL-LGAAAAAFARAARADLAAALLALLD--RDLRAALARITVPTLIIHGE 230 (282)
T ss_pred hhhhhhhhcccccccccccchhcccccccccc-chhHhhhhhhhcccccchhhhcccc--cccchhhccCCCCeEEEecC
Confidence 0 0000000000000 0000000 0000000000000000000000000 01223456778999999999
Q ss_pred CCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhh
Q 035721 260 DDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFG 306 (308)
Q Consensus 260 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~ 306 (308)
+|.+.+......+.+.++. ..++.+++++||+++ ++|+.+.+.+.+
T Consensus 231 ~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 277 (282)
T COG0596 231 DDPVVPAELARRLAAALPN-DARLVVIPGAGHFPHLEAPEAFAAALLA 277 (282)
T ss_pred CCCcCCHHHHHHHHhhCCC-CceEEEeCCCCCcchhhcHHHHHHHHHH
Confidence 9977766655666666632 489999999999999 999988877764
No 73
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.84 E-value=3.2e-19 Score=133.39 Aligned_cols=121 Identities=15% Similarity=0.120 Sum_probs=87.3
Q ss_pred EEecCCCCCCCcceEEEEccCCCccchHH--HHHHHHHHHcCCeEEEecCCCCcCCCCccccC-----CCcchHHHHHHH
Q 035721 47 QWWTPLPPAKTLGVLCVVHGFTGESSWIV--QLTAVLFAKSGFATCAIDHQGHGFSDGLVAHI-----PDLNPVVEDAIS 119 (308)
Q Consensus 47 ~~~~~~~~~~~~~~vv~~hG~~~~~~~~~--~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~-----~~~~~~~~d~~~ 119 (308)
.+|.|++.+.+.|+||++||.+++...+. ..+.+.+.+.||.|+++|++|++.+....... ........++..
T Consensus 2 ~ly~P~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (212)
T TIGR01840 2 YVYVPAGLTGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQ 81 (212)
T ss_pred EEEcCCCCCCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHH
Confidence 34556554456899999999987765331 12455555679999999999987543211100 011234677888
Q ss_pred HHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 120 FFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 120 ~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
+++.+..+.. +.++++|+|||+||.+++.++.++|+++.+++.+++..
T Consensus 82 ~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 82 LIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred HHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 8888877654 66799999999999999999999999999998888754
No 74
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.84 E-value=2.6e-19 Score=134.70 Aligned_cols=176 Identities=20% Similarity=0.173 Sum_probs=121.1
Q ss_pred EEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcC-CCC-ccccCC--------CcchHHH
Q 035721 46 TQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGF-SDG-LVAHIP--------DLNPVVE 115 (308)
Q Consensus 46 ~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~-s~~-~~~~~~--------~~~~~~~ 115 (308)
.++..|.+. .+.|.||++|+..|-.. ..+.+++.|+++||.|+++|+.+-.. ... ...... ..+...+
T Consensus 3 ay~~~P~~~-~~~~~Vvv~~d~~G~~~-~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (218)
T PF01738_consen 3 AYVARPEGG-GPRPAVVVIHDIFGLNP-NIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAA 80 (218)
T ss_dssp EEEEEETTS-SSEEEEEEE-BTTBS-H-HHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHH
T ss_pred EEEEeCCCC-CCCCEEEEEcCCCCCch-HHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHH
Confidence 445667665 57899999999987665 55789999999999999999865444 111 110000 1234567
Q ss_pred HHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcc
Q 035721 116 DAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWR 194 (308)
Q Consensus 116 d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (308)
++.+.++.+..... +..++.++|+|+||.+++.++.+. +.++++|..-|....
T Consensus 81 ~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~------------------------- 134 (218)
T PF01738_consen 81 DLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP------------------------- 134 (218)
T ss_dssp HHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG-------------------------
T ss_pred HHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC-------------------------
Confidence 88888888887632 457999999999999999999887 579999977661000
Q ss_pred cccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHH
Q 035721 195 VVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYK 274 (308)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~ 274 (308)
........++++|+++++|++|+.++.+..+.+.+
T Consensus 135 ---------------------------------------------~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~ 169 (218)
T PF01738_consen 135 ---------------------------------------------PPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEE 169 (218)
T ss_dssp ---------------------------------------------GGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHH
T ss_pred ---------------------------------------------CcchhhhcccCCCEeecCccCCCCCChHHHHHHHH
Confidence 01123356788999999999999999998888888
Q ss_pred Hhc--CCCCcEEEecCCccccc
Q 035721 275 RAA--SKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 275 ~~~--~~~~~~~~~~~~gH~~~ 294 (308)
.+. +...++++|+|++|.+.
T Consensus 170 ~l~~~~~~~~~~~y~ga~HgF~ 191 (218)
T PF01738_consen 170 ALKAAGVDVEVHVYPGAGHGFA 191 (218)
T ss_dssp HHHCTTTTEEEEEETT--TTTT
T ss_pred HHHhcCCcEEEEECCCCccccc
Confidence 883 35689999999999998
No 75
>PLN02442 S-formylglutathione hydrolase
Probab=99.83 E-value=1.8e-18 Score=134.51 Aligned_cols=212 Identities=18% Similarity=0.220 Sum_probs=129.1
Q ss_pred cCCCcEEEEEEecCCCC-CCCcceEEEEccCCCccchHH--HHHHHHHHHcCCeEEEecCCCCcC-----CCC----cc-
Q 035721 38 NSRGLRLFTQWWTPLPP-AKTLGVLCVVHGFTGESSWIV--QLTAVLFAKSGFATCAIDHQGHGF-----SDG----LV- 104 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~--~~~~~~l~~~g~~v~~~d~~G~G~-----s~~----~~- 104 (308)
..-|..+.|.++.|+.. ..+.|+|+++||++++...+. ..+.+.+...|+.|+.+|..++|. +.. ..
T Consensus 26 ~~l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~ 105 (283)
T PLN02442 26 STLGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGA 105 (283)
T ss_pred cccCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCc
Confidence 34577899999988632 246799999999988765221 234566677799999999887662 110 00
Q ss_pred c-----cC-----CC-cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCC
Q 035721 105 A-----HI-----PD-LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKF 173 (308)
Q Consensus 105 ~-----~~-----~~-~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~ 173 (308)
. .. .. .....+++...++...... +..+++++||||||..|+.++.++|+++++++++++.......
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~-~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~- 183 (283)
T PLN02442 106 GFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQL-DTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINC- 183 (283)
T ss_pred ceeeccccCCCcccchhhhHHHHHHHHHHHHHHhc-CCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccC-
Confidence 0 00 00 1113445555554432211 5568999999999999999999999999999999987543210
Q ss_pred CCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcce
Q 035721 174 KPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPM 253 (308)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 253 (308)
..... .+...+.. +.. .... ... ......+...++|+
T Consensus 184 --~~~~~----~~~~~~g~----------------~~~---~~~~-----------------~d~-~~~~~~~~~~~~pv 220 (283)
T PLN02442 184 --PWGQK----AFTNYLGS----------------DKA---DWEE-----------------YDA-TELVSKFNDVSATI 220 (283)
T ss_pred --chhhH----HHHHHcCC----------------Chh---hHHH-----------------cCh-hhhhhhccccCCCE
Confidence 00000 00000000 000 0000 000 11223345568999
Q ss_pred EEEeeCCCcccChH-HHHHHHHHhc--CCCCcEEEecCCccccc
Q 035721 254 LICHGGDDVVCDPA-CVEELYKRAA--SKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 254 l~i~g~~D~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~gH~~~ 294 (308)
++++|++|.+++.. .++.+.+.+. +.+++++++++.+|...
T Consensus 221 li~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 221 LIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred EEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 99999999998863 3455555443 23589999999999876
No 76
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.83 E-value=1.2e-18 Score=120.23 Aligned_cols=194 Identities=25% Similarity=0.293 Sum_probs=138.9
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCC---Cccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccC
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFT---GESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHI 107 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~---~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 107 (308)
.+..+.-.-| ++..+.- +.+ .++.|+.|++|.-+ ++.. -..+.++..|.+.||.++.+|+||.|.|.+..+.
T Consensus 5 ~~v~i~Gp~G-~le~~~~-~~~-~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~- 80 (210)
T COG2945 5 PTVIINGPAG-RLEGRYE-PAK-TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDN- 80 (210)
T ss_pred CcEEecCCcc-cceeccC-CCC-CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccC-
Confidence 3445544445 4444332 222 25688999999753 2222 1235788899999999999999999999987654
Q ss_pred CCcchHHHHHHHHHHHHHHhcCCCCCE-EEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh
Q 035721 108 PDLNPVVEDAISFFDSFRARHAPDLPA-FLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
..-+ .+|..+++++++.+. +..+. .+.|+|+|++|+..+|.+.|+ ....+.+.|.....
T Consensus 81 -GiGE-~~Da~aaldW~~~~h-p~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~---------------- 140 (210)
T COG2945 81 -GIGE-LEDAAAALDWLQARH-PDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAY---------------- 140 (210)
T ss_pred -Ccch-HHHHHHHHHHHHhhC-CCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCch----------------
Confidence 3333 689999999999885 33333 688999999999999999986 55555555533200
Q ss_pred hhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccCh
Q 035721 187 AWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDP 266 (308)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 266 (308)
+ ...+....+|.++|+|+.|.+++.
T Consensus 141 ------------------------------------------------------d-fs~l~P~P~~~lvi~g~~Ddvv~l 165 (210)
T COG2945 141 ------------------------------------------------------D-FSFLAPCPSPGLVIQGDADDVVDL 165 (210)
T ss_pred ------------------------------------------------------h-hhhccCCCCCceeEecChhhhhcH
Confidence 0 022345678999999999999998
Q ss_pred HHHHHHHHHhcCCCCcEEEecCCcccccCCchhhHHHhhhc
Q 035721 267 ACVEELYKRAASKDKTLSIYPGMWHQLIGEPEENVELVFGE 307 (308)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~~ 307 (308)
....++++.. ..+++++++++|+++.+-..+.+.+.++
T Consensus 166 ~~~l~~~~~~---~~~~i~i~~a~HFF~gKl~~l~~~i~~~ 203 (210)
T COG2945 166 VAVLKWQESI---KITVITIPGADHFFHGKLIELRDTIADF 203 (210)
T ss_pred HHHHHhhcCC---CCceEEecCCCceecccHHHHHHHHHHH
Confidence 8887777663 5789999999999997777777777654
No 77
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.82 E-value=2.3e-18 Score=133.83 Aligned_cols=210 Identities=18% Similarity=0.184 Sum_probs=124.1
Q ss_pred cCCCcEEEEEEecCCCC-CCCcceEEEEccCCCccchH-HHHHHHHH-HHcCCeEEEecC--CCCcCCCCccc-------
Q 035721 38 NSRGLRLFTQWWTPLPP-AKTLGVLCVVHGFTGESSWI-VQLTAVLF-AKSGFATCAIDH--QGHGFSDGLVA------- 105 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~-~~~~~~~l-~~~g~~v~~~d~--~G~G~s~~~~~------- 105 (308)
..-+.++.|.++.|+.. ..+.|+|+++||++++...+ +......+ .+.|+.|+++|. +|+|.+.....
T Consensus 21 ~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~ 100 (275)
T TIGR02821 21 ETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGA 100 (275)
T ss_pred cccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCc
Confidence 34567888999988642 24579999999999877623 12223344 456999999998 55553321100
Q ss_pred ------------cCCCcch-HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcC
Q 035721 106 ------------HIPDLNP-VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQK 172 (308)
Q Consensus 106 ------------~~~~~~~-~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~ 172 (308)
..+...+ .++++..+++....- +..+++++||||||.+|+.++.++|+.+++++++++......
T Consensus 101 ~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~- 177 (275)
T TIGR02821 101 GFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPL--DGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSR- 177 (275)
T ss_pred cccccCCcCcccccchHHHHHHHHHHHHHHhhCCC--CCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCccc-
Confidence 0011111 234444444432111 456899999999999999999999999999999998754321
Q ss_pred CCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcc
Q 035721 173 FKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVP 252 (308)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 252 (308)
.... . ......+. .+...... ... ....... ....|
T Consensus 178 --~~~~-~---~~~~~~l~--------------------------~~~~~~~~-------~~~----~~~~~~~-~~~~p 213 (275)
T TIGR02821 178 --CPWG-Q---KAFSAYLG--------------------------ADEAAWRS-------YDA----SLLVADG-GRHST 213 (275)
T ss_pred --Ccch-H---HHHHHHhc--------------------------ccccchhh-------cch----HHHHhhc-ccCCC
Confidence 0000 0 00000000 00000000 000 0111111 24569
Q ss_pred eEEEeeCCCcccCh-HHHHHHHHHhcC--CCCcEEEecCCccccc
Q 035721 253 MLICHGGDDVVCDP-ACVEELYKRAAS--KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 253 ~l~i~g~~D~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 294 (308)
+++++|+.|..++. .....+.+.+.. ..+++.++||++|.+.
T Consensus 214 lli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~ 258 (275)
T TIGR02821 214 ILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYY 258 (275)
T ss_pred eeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccch
Confidence 99999999999998 455566655542 3478999999999887
No 78
>PLN00021 chlorophyllase
Probab=99.82 E-value=7.5e-19 Score=137.24 Aligned_cols=185 Identities=17% Similarity=0.134 Sum_probs=123.3
Q ss_pred cEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHH
Q 035721 42 LRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFF 121 (308)
Q Consensus 42 ~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l 121 (308)
..+.+.++.|... ...|+|||+||++.+.. +|..+++.|+++||.|+++|++|++.+... ..+ ++..+++
T Consensus 37 ~~~p~~v~~P~~~-g~~PvVv~lHG~~~~~~-~y~~l~~~Las~G~~VvapD~~g~~~~~~~----~~i----~d~~~~~ 106 (313)
T PLN00021 37 PPKPLLVATPSEA-GTYPVLLFLHGYLLYNS-FYSQLLQHIASHGFIVVAPQLYTLAGPDGT----DEI----KDAAAVI 106 (313)
T ss_pred CCceEEEEeCCCC-CCCCEEEEECCCCCCcc-cHHHHHHHHHhCCCEEEEecCCCcCCCCch----hhH----HHHHHHH
Confidence 4566777878654 55799999999998876 568899999999999999999986533211 112 2233333
Q ss_pred HHHHHh--------cC-CCCCEEEEEechhhHHHHHHHHhcCC-----CccEEEEeCCcCCCCcCCCCCchhhhhHHHhh
Q 035721 122 DSFRAR--------HA-PDLPAFLYSESLGGAIALYITLRQKG-----AWDGLILNGAMCGISQKFKPPWPLEHLLFTVA 187 (308)
Q Consensus 122 ~~~~~~--------~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (308)
+++... .. +..+++++|||+||.+|+.++.++++ +++++|+++|..........
T Consensus 107 ~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~------------ 174 (313)
T PLN00021 107 NWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQT------------ 174 (313)
T ss_pred HHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccCC------------
Confidence 333221 00 34689999999999999999998874 68999999986543210000
Q ss_pred hhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCc-----
Q 035721 188 WLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDV----- 262 (308)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~----- 262 (308)
.... ........++.+|++++.+..|.
T Consensus 175 ---------------~p~i---------------------------------l~~~~~s~~~~~P~liig~g~~~~~~~~ 206 (313)
T PLN00021 175 ---------------PPPV---------------------------------LTYAPHSFNLDIPVLVIGTGLGGEPRNP 206 (313)
T ss_pred ---------------CCcc---------------------------------cccCcccccCCCCeEEEecCCCcccccc
Confidence 0000 00011123478999999998763
Q ss_pred c----cChH-HHHHHHHHhcCCCCcEEEecCCccccc-CCc
Q 035721 263 V----CDPA-CVEELYKRAASKDKTLSIYPGMWHQLI-GEP 297 (308)
Q Consensus 263 ~----~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~ 297 (308)
. .|.. ...++++.++ +.+...+++++||+-+ ++.
T Consensus 207 ~~p~~ap~~~~~~~f~~~~~-~~~~~~~~~~~gH~~~~~~~ 246 (313)
T PLN00021 207 LFPPCAPDGVNHAEFFNECK-APAVHFVAKDYGHMDMLDDD 246 (313)
T ss_pred cccccCCCCCCHHHHHHhcC-CCeeeeeecCCCcceeecCC
Confidence 2 2233 3477888876 4688899999999988 544
No 79
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.82 E-value=1.5e-18 Score=135.68 Aligned_cols=232 Identities=22% Similarity=0.223 Sum_probs=139.7
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc---
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV--- 104 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~--- 104 (308)
++......+...+|..|+...+.|.....+.|+||.+||.++....+. ... .++..||.|+.+|.||+|......
T Consensus 53 ~~~vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~-~~~-~~a~~G~~vl~~d~rGqg~~~~d~~~~ 130 (320)
T PF05448_consen 53 GVEVYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPF-DLL-PWAAAGYAVLAMDVRGQGGRSPDYRGS 130 (320)
T ss_dssp SEEEEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHH-HHH-HHHHTT-EEEEE--TTTSSSS-B-SSB
T ss_pred CEEEEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcc-ccc-ccccCCeEEEEecCCCCCCCCCCcccc
Confidence 455567788889999999999999854467899999999998865332 332 467889999999999999322110
Q ss_pred ------cc----CCC------cchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 105 ------AH----IPD------LNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 105 ------~~----~~~------~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
.+ ..+ +..+..|...+++.+..... +..++.+.|.|+||.+++.+|+..+ +|++++...|..
T Consensus 131 ~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l 209 (320)
T PF05448_consen 131 SGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFL 209 (320)
T ss_dssp SSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESS
T ss_pred CCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCc
Confidence 00 001 12245688888888887655 7789999999999999999999886 699999988854
Q ss_pred CCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHh-hCCCCCCCcchHHHHHHHHHHHHHhhhhc
Q 035721 168 GISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLAL-SSPRRPVARPRAATALELLRVSRDLQGRF 246 (308)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (308)
.-.. ........ ...+ ........ .+.. ........+.+.. .|.....
T Consensus 210 ~d~~---------~~~~~~~~---------------~~~y--~~~~~~~~~~d~~----~~~~~~v~~~L~Y-~D~~nfA 258 (320)
T PF05448_consen 210 CDFR---------RALELRAD---------------EGPY--PEIRRYFRWRDPH----HEREPEVFETLSY-FDAVNFA 258 (320)
T ss_dssp SSHH---------HHHHHT-----------------STTT--HHHHHHHHHHSCT----HCHHHHHHHHHHT-T-HHHHG
T ss_pred cchh---------hhhhcCCc---------------cccH--HHHHHHHhccCCC----cccHHHHHHHHhh-hhHHHHH
Confidence 3210 00000000 0000 00000000 0000 0011111111111 4556677
Q ss_pred CCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 247 EEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 247 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
+.|++|+++..|-.|.+|||......++.+++ .+++.+++..||...
T Consensus 259 ~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~-~K~l~vyp~~~He~~ 305 (320)
T PF05448_consen 259 RRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG-PKELVVYPEYGHEYG 305 (320)
T ss_dssp GG--SEEEEEEETT-SSS-HHHHHHHHCC--S-SEEEEEETT--SSTT
T ss_pred HHcCCCEEEEEecCCCCCCchhHHHHHhccCC-CeeEEeccCcCCCch
Confidence 88999999999999999999999999999975 589999999999877
No 80
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.82 E-value=8.8e-19 Score=148.82 Aligned_cols=131 Identities=15% Similarity=0.160 Sum_probs=105.9
Q ss_pred EcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccc---hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchH
Q 035721 37 TNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS---WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPV 113 (308)
Q Consensus 37 ~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~---~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 113 (308)
.+.||.+|++.++.|... .+.|+||++||++.+.. .+.......|+++||.|+++|+||+|.|.+..... + ...
T Consensus 2 ~~~DG~~L~~~~~~P~~~-~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~-~-~~~ 78 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGG-GPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLL-G-SDE 78 (550)
T ss_pred cCCCCCEEEEEEEecCCC-CCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEec-C-ccc
Confidence 467899999999988653 46899999999987642 11123456788899999999999999999865432 3 567
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCC
Q 035721 114 VEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGIS 170 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 170 (308)
++|+.++++++..+.....+++++|+|+||.+++.+|..+|++++++|..++.....
T Consensus 79 ~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 79 AADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLY 135 (550)
T ss_pred chHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchh
Confidence 899999999998764334699999999999999999999999999999988876543
No 81
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.81 E-value=1.1e-18 Score=126.23 Aligned_cols=220 Identities=15% Similarity=0.111 Sum_probs=140.4
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHH-HHHhcCCCCCEE
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDS-FRARHAPDLPAF 135 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~-~~~~~~~~~~~~ 135 (308)
.+..++++|-.|+++. .++.+...|... +.++++++||+|..-..+.. .+++.+++.+...+.. . ...++.
T Consensus 6 ~~~~L~cfP~AGGsa~-~fr~W~~~lp~~-iel~avqlPGR~~r~~ep~~-~di~~Lad~la~el~~~~-----~d~P~a 77 (244)
T COG3208 6 ARLRLFCFPHAGGSAS-LFRSWSRRLPAD-IELLAVQLPGRGDRFGEPLL-TDIESLADELANELLPPL-----LDAPFA 77 (244)
T ss_pred CCceEEEecCCCCCHH-HHHHHHhhCCch-hheeeecCCCcccccCCccc-ccHHHHHHHHHHHhcccc-----CCCCee
Confidence 4677889988888887 558888888664 99999999999987554433 3777777777776663 2 334999
Q ss_pred EEEechhhHHHHHHHHhcC---CCccEEEEeCCcCCCCcCC--CCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccH
Q 035721 136 LYSESLGGAIALYITLRQK---GAWDGLILNGAMCGISQKF--KPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEE 210 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (308)
++||||||++|.++|.+.. ....++.+.+......... ........++..+..+- ......+.++
T Consensus 78 lfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lg----------G~p~e~led~ 147 (244)
T COG3208 78 LFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLG----------GTPPELLEDP 147 (244)
T ss_pred ecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhC----------CCChHHhcCH
Confidence 9999999999999998753 2366677666543311110 11111111222222111 1122233333
Q ss_pred HHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCc
Q 035721 211 WKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMW 290 (308)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 290 (308)
+...... +.++........ ..+.. -..+.||+.++.|++|..+..+....+.+..+ ...++.+++ +|
T Consensus 148 El~~l~L---------PilRAD~~~~e~-Y~~~~-~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~-~~f~l~~fd-Gg 214 (244)
T COG3208 148 ELMALFL---------PILRADFRALES-YRYPP-PAPLACPIHAFGGEKDHEVSRDELGAWREHTK-GDFTLRVFD-GG 214 (244)
T ss_pred HHHHHHH---------HHHHHHHHHhcc-cccCC-CCCcCcceEEeccCcchhccHHHHHHHHHhhc-CCceEEEec-Cc
Confidence 3322211 111111111111 11111 24689999999999999999999999998885 378999999 88
Q ss_pred cccc-CCchhhHHHhhhc
Q 035721 291 HQLI-GEPEENVELVFGE 307 (308)
Q Consensus 291 H~~~-~~~~~~~~~i~~~ 307 (308)
|++. ++.+++...+.+.
T Consensus 215 HFfl~~~~~~v~~~i~~~ 232 (244)
T COG3208 215 HFFLNQQREEVLARLEQH 232 (244)
T ss_pred ceehhhhHHHHHHHHHHH
Confidence 9999 8888888877654
No 82
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.80 E-value=1.2e-18 Score=137.13 Aligned_cols=228 Identities=17% Similarity=0.099 Sum_probs=129.1
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccC
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHI 107 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 107 (308)
+.+.++..+...+ .+|....+.|... .+.|+||++.|+.+....++..+.+.|.++|+.++++|.||.|.|...+-.
T Consensus 162 ~~~i~~v~iP~eg-~~I~g~LhlP~~~-~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~- 238 (411)
T PF06500_consen 162 DYPIEEVEIPFEG-KTIPGYLHLPSGE-KPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT- 238 (411)
T ss_dssp SSEEEEEEEEETT-CEEEEEEEESSSS-S-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--
T ss_pred CCCcEEEEEeeCC-cEEEEEEEcCCCC-CCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-
Confidence 4445666665554 7888888888744 678999999998887765666667789999999999999999998653322
Q ss_pred CCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh
Q 035721 108 PDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
.+.+.. ..++++++..... +..+|.++|.|+||++|.++|..+++|++++|..++.....- .............
T Consensus 239 ~D~~~l---~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~f--t~~~~~~~~P~my 313 (411)
T PF06500_consen 239 QDSSRL---HQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFF--TDPEWQQRVPDMY 313 (411)
T ss_dssp S-CCHH---HHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGG--H-HHHHTTS-HHH
T ss_pred cCHHHH---HHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhh--ccHHHHhcCCHHH
Confidence 233333 3466677766544 777999999999999999999999899999999998643210 0000000000000
Q ss_pred hhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhh--hhc--CCCCcceEEEeeCCCc
Q 035721 187 AWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQ--GRF--EEVEVPMLICHGGDDV 262 (308)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~i~~P~l~i~g~~D~ 262 (308)
...+.. .+......+......... ..+. ..+ .+..+|+|.+.|++|+
T Consensus 314 ~d~LA~--------rlG~~~~~~~~l~~el~~---------------------~SLk~qGlL~~rr~~~plL~i~~~~D~ 364 (411)
T PF06500_consen 314 LDVLAS--------RLGMAAVSDESLRGELNK---------------------FSLKTQGLLSGRRCPTPLLAINGEDDP 364 (411)
T ss_dssp HHHHHH--------HCT-SCE-HHHHHHHGGG---------------------GSTTTTTTTTSS-BSS-EEEEEETT-S
T ss_pred HHHHHH--------HhCCccCCHHHHHHHHHh---------------------cCcchhccccCCCCCcceEEeecCCCC
Confidence 000000 000000001111111110 1111 123 5678999999999999
Q ss_pred ccChHHHHHHHHHhcCCCCcEEEecCCc-cccc
Q 035721 263 VCDPACVEELYKRAASKDKTLSIYPGMW-HQLI 294 (308)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~~ 294 (308)
++|.+..+-++..- .+.+...++... |.-+
T Consensus 365 v~P~eD~~lia~~s--~~gk~~~~~~~~~~~gy 395 (411)
T PF06500_consen 365 VSPIEDSRLIAESS--TDGKALRIPSKPLHMGY 395 (411)
T ss_dssp SS-HHHHHHHHHTB--TT-EEEEE-SSSHHHHH
T ss_pred CCCHHHHHHHHhcC--CCCceeecCCCccccch
Confidence 99999988887765 355677776443 4443
No 83
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.79 E-value=3.2e-17 Score=123.12 Aligned_cols=186 Identities=20% Similarity=0.187 Sum_probs=142.5
Q ss_pred eeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCC-cCCCCcc----c--c
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGH-GFSDGLV----A--H 106 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~----~--~ 106 (308)
..+...+ .++..++..|... .+.|.||++|+..+-.. ..+.+++.|+..||.|+++|+-+. |.+.... . .
T Consensus 5 v~~~~~~-~~~~~~~a~P~~~-~~~P~VIv~hei~Gl~~-~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~ 81 (236)
T COG0412 5 VTIPAPD-GELPAYLARPAGA-GGFPGVIVLHEIFGLNP-HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELET 81 (236)
T ss_pred eEeeCCC-ceEeEEEecCCcC-CCCCEEEEEecccCCch-HHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhh
Confidence 3454555 6888888888765 33499999999988776 668999999999999999998763 3222211 0 0
Q ss_pred ----CCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhh
Q 035721 107 ----IPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH 181 (308)
Q Consensus 107 ----~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~ 181 (308)
..+..+...|+.+.++++..... +..+|.++|+||||.+++.++.+.| .+++.+..-+......
T Consensus 82 ~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~---------- 150 (236)
T COG0412 82 GLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADD---------- 150 (236)
T ss_pred hhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCc----------
Confidence 01235677899999999987642 5778999999999999999999887 6899887666322110
Q ss_pred hHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCC
Q 035721 182 LLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDD 261 (308)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 261 (308)
.....++++|+++.+|+.|
T Consensus 151 -------------------------------------------------------------~~~~~~~~~pvl~~~~~~D 169 (236)
T COG0412 151 -------------------------------------------------------------TADAPKIKVPVLLHLAGED 169 (236)
T ss_pred -------------------------------------------------------------ccccccccCcEEEEecccC
Confidence 0113578899999999999
Q ss_pred cccChHHHHHHHHHhcCC--CCcEEEecCCccccc
Q 035721 262 VVCDPACVEELYKRAASK--DKTLSIYPGMWHQLI 294 (308)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~ 294 (308)
..+|......+.+.+... ++++.+++++.|.++
T Consensus 170 ~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~ 204 (236)
T COG0412 170 PYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFA 204 (236)
T ss_pred CCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccc
Confidence 999999888888887644 688999999999998
No 84
>PRK10115 protease 2; Provisional
Probab=99.79 E-value=2.9e-17 Score=141.75 Aligned_cols=233 Identities=12% Similarity=0.072 Sum_probs=152.1
Q ss_pred cccccceeEEcCCCcEEEEEE-ecCCC-CCCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCcc
Q 035721 28 SVSHSSEYITNSRGLRLFTQW-WTPLP-PAKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLV 104 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~-~~~~~-~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 104 (308)
.+..+..++++.||.+|.+.+ +.+.. ...+.|+||++||..+.+. ..|......|.++||.|+.++.||-|.-....
T Consensus 413 ~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w 492 (686)
T PRK10115 413 NYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQW 492 (686)
T ss_pred ccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHH
Confidence 456677788999999999844 44432 1245699999999776553 23455566788999999999999976544311
Q ss_pred cc---CCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhh
Q 035721 105 AH---IPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLE 180 (308)
Q Consensus 105 ~~---~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~ 180 (308)
.. ...-....+|+.+.++++..+.. ++.++.+.|.|.||.++..++.++|++++++|+..|.......+....
T Consensus 493 ~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~--- 569 (686)
T PRK10115 493 YEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDES--- 569 (686)
T ss_pred HHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCC---
Confidence 11 00111346788888888876644 788999999999999999999999999999999998766432110000
Q ss_pred hhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcc-eEEEeeC
Q 035721 181 HLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVP-MLICHGG 259 (308)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l~i~g~ 259 (308)
.+.. ..+ ...+ .+ +.-.....++.. ......+.+++.| +|+++|.
T Consensus 570 ---------~p~~---------------~~~-~~e~-G~-------p~~~~~~~~l~~-~SP~~~v~~~~~P~lLi~~g~ 615 (686)
T PRK10115 570 ---------IPLT---------------TGE-FEEW-GN-------PQDPQYYEYMKS-YSPYDNVTAQAYPHLLVTTGL 615 (686)
T ss_pred ---------CCCC---------------hhH-HHHh-CC-------CCCHHHHHHHHH-cCchhccCccCCCceeEEecC
Confidence 0000 000 0000 00 000011111111 1222445677889 5677999
Q ss_pred CCcccChHHHHHHHHHhcC--CCCcEEEe---cCCcccccCCc
Q 035721 260 DDVVCDPACVEELYKRAAS--KDKTLSIY---PGMWHQLIGEP 297 (308)
Q Consensus 260 ~D~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~gH~~~~~~ 297 (308)
+|..|++.++.++..++.. .+.+++++ +++||......
T Consensus 616 ~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~~r 658 (686)
T PRK10115 616 HDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGR 658 (686)
T ss_pred CCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCcCH
Confidence 9999999999999988853 34677788 89999855433
No 85
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.78 E-value=3.9e-18 Score=127.47 Aligned_cols=256 Identities=14% Similarity=0.125 Sum_probs=145.7
Q ss_pred eeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHH-----HHHHHHcCCeEEEecCCCCcCCCC--ccc-
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLT-----AVLFAKSGFATCAIDHQGHGFSDG--LVA- 105 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~-----~~~l~~~g~~v~~~d~~G~G~s~~--~~~- 105 (308)
..+.+.-| .+++.++|..++ ++|++|-.|..|.+....++.+ .+.+.++ +.++-+|.||+..-.. +.+
T Consensus 2 h~v~t~~G-~v~V~v~G~~~~--~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y 77 (283)
T PF03096_consen 2 HDVETPYG-SVHVTVQGDPKG--NKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGY 77 (283)
T ss_dssp EEEEETTE-EEEEEEESS--T--TS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT-
T ss_pred ceeccCce-EEEEEEEecCCC--CCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCcccccccc
Confidence 34566667 788888886553 5999999999998876433433 4455555 9999999999976443 222
Q ss_pred cCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHH
Q 035721 106 HIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFT 185 (308)
Q Consensus 106 ~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 185 (308)
...+++++++++..++++++.+ .++-+|-..||+|..++|..+|++|.|+||+++...... +.......
T Consensus 78 ~yPsmd~LAe~l~~Vl~~f~lk-----~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~g------w~Ew~~~K 146 (283)
T PF03096_consen 78 QYPSMDQLAEMLPEVLDHFGLK-----SVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAG------WMEWFYQK 146 (283)
T ss_dssp ----HHHHHCTHHHHHHHHT--------EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---------HHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHhCCcc-----EEEEEeeccchhhhhhccccCccceeEEEEEecCCCCcc------HHHHHHHH
Confidence 2358999999999999999998 999999999999999999999999999999999755321 11111111
Q ss_pred hh-hhCCCcccccCCC-CCCCcccc------cHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEe
Q 035721 186 VA-WLVPTWRVVPTRG-SLPMVSFK------EEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICH 257 (308)
Q Consensus 186 ~~-~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~ 257 (308)
+. ..+.......... .+....|. +....+.+............+..+...+....++....+...||+|++.
T Consensus 147 ~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvv 226 (283)
T PF03096_consen 147 LSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVV 226 (283)
T ss_dssp HH-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEE
T ss_pred HhcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEE
Confidence 11 1111100000000 00000000 1111222222211222223344444444444666666778889999999
Q ss_pred eCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhh
Q 035721 258 GGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFG 306 (308)
Q Consensus 258 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~ 306 (308)
|+..+.. +.+.++..++...+.++..+++||=.+. ++|..+++.+.=
T Consensus 227 G~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~l 274 (283)
T PF03096_consen 227 GDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKL 274 (283)
T ss_dssp ETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHH
T ss_pred ecCCcch--hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHH
Confidence 9998775 6778888888656789999999999999 999999887653
No 86
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.78 E-value=3.2e-17 Score=134.20 Aligned_cols=241 Identities=12% Similarity=0.019 Sum_probs=146.0
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCccchHH-----HHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHH
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIV-----QLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDA 117 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~ 117 (308)
.+....|.|.....-+.+||+++++-.... .+ +.+++.|.++||.|+.+|+++-+.+.. ..+++++++.+
T Consensus 200 l~eLiqY~P~te~v~~~PLLIVPp~INK~Y-IlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r----~~~ldDYv~~i 274 (560)
T TIGR01839 200 VLELIQYKPITEQQHARPLLVVPPQINKFY-IFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR----EWGLSTYVDAL 274 (560)
T ss_pred ceEEEEeCCCCCCcCCCcEEEechhhhhhh-eeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc----CCCHHHHHHHH
Confidence 344555666554445788999999763322 22 579999999999999999998665532 24789999999
Q ss_pred HHHHHHHHHhcCCCCCEEEEEechhhHHHHH----HHHhcCC-CccEEEEeCCcCCCCcCCCCCchh-hhhHHHhh----
Q 035721 118 ISFFDSFRARHAPDLPAFLYSESLGGAIALY----ITLRQKG-AWDGLILNGAMCGISQKFKPPWPL-EHLLFTVA---- 187 (308)
Q Consensus 118 ~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~----~a~~~p~-~v~~~vl~~~~~~~~~~~~~~~~~-~~~~~~~~---- 187 (308)
.++++.+.... +..++.++|+|+||.++.. +++++++ +|++++++.+...+.......... ........
T Consensus 275 ~~Ald~V~~~t-G~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~ 353 (560)
T TIGR01839 275 KEAVDAVRAIT-GSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSY 353 (560)
T ss_pred HHHHHHHHHhc-CCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHH
Confidence 99999988765 6678999999999999986 7888885 899999999888765422111111 11111100
Q ss_pred --hhCCCcccccCCCCCCCc--ccccHHHH-------------HHHhhCCCCCCCcchHHHHHHHHHHHHHhhh------
Q 035721 188 --WLVPTWRVVPTRGSLPMV--SFKEEWKR-------------KLALSSPRRPVARPRAATALELLRVSRDLQG------ 244 (308)
Q Consensus 188 --~~~~~~~~~~~~~~~~~~--~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 244 (308)
..++........ .+.+. .+...... ..+..+.... .......+..++.. ..+..
T Consensus 354 ~~G~lpg~~ma~~F-~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~l-Pg~~~~e~l~ly~~-N~L~~pG~l~v 430 (560)
T TIGR01839 354 QAGVLDGSEMAKVF-AWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRL-PAAFHGDLLDMFKS-NPLTRPDALEV 430 (560)
T ss_pred hcCCcCHHHHHHHH-HhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccc-hHHHHHHHHHHHhc-CCCCCCCCEEE
Confidence 111110000000 00000 00000000 0000010000 00111122222211 12211
Q ss_pred -----hcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 245 -----RFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 245 -----~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
.+++|++|++++.|++|.++|++.+..+.+.+.+ +++++..+ +||.--
T Consensus 431 ~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs-~~~fvl~~-gGHIgg 483 (560)
T TIGR01839 431 CGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGG-KRRFVLSN-SGHIQS 483 (560)
T ss_pred CCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCC-CeEEEecC-CCcccc
Confidence 3678999999999999999999999999998875 57777765 889755
No 87
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.78 E-value=6.2e-18 Score=126.75 Aligned_cols=182 Identities=20% Similarity=0.215 Sum_probs=104.9
Q ss_pred CCcceEEEEccCCCccchHHHHHHH-HHHHcCCeEEEecCCC------CcC---CCCccc---c-----CCCcchHHHHH
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAV-LFAKSGFATCAIDHQG------HGF---SDGLVA---H-----IPDLNPVVEDA 117 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~-~l~~~g~~v~~~d~~G------~G~---s~~~~~---~-----~~~~~~~~~d~ 117 (308)
+..++||++||+|.+.. .+..+.. .+......++.++-|- .|. +-.... . ...+...++.+
T Consensus 12 ~~~~lvi~LHG~G~~~~-~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l 90 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSED-LFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERL 90 (216)
T ss_dssp T-SEEEEEE--TTS-HH-HHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHH
T ss_pred CCceEEEEECCCCCCcc-hhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHH
Confidence 46899999999998875 4333333 1222346677765442 122 111000 0 00122233455
Q ss_pred HHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCccccc
Q 035721 118 ISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVP 197 (308)
Q Consensus 118 ~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (308)
.++++.......+..++++.|+|+||.+|+.++.++|+.+.++|.+++........
T Consensus 91 ~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~------------------------ 146 (216)
T PF02230_consen 91 DELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL------------------------ 146 (216)
T ss_dssp HHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC------------------------
T ss_pred HHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc------------------------
Confidence 55555443221166799999999999999999999999999999999854322100
Q ss_pred CCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhc
Q 035721 198 TRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAA 277 (308)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 277 (308)
........ ++|++++||.+|+++|.+.++...+.+.
T Consensus 147 ------------------------------------------~~~~~~~~--~~pi~~~hG~~D~vvp~~~~~~~~~~L~ 182 (216)
T PF02230_consen 147 ------------------------------------------EDRPEALA--KTPILIIHGDEDPVVPFEWAEKTAEFLK 182 (216)
T ss_dssp ------------------------------------------HCCHCCCC--TS-EEEEEETT-SSSTHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccccC--CCcEEEEecCCCCcccHHHHHHHHHHHH
Confidence 00001111 6899999999999999999999888886
Q ss_pred C--CCCcEEEecCCccccc-CCchhhHHHhhh
Q 035721 278 S--KDKTLSIYPGMWHQLI-GEPEENVELVFG 306 (308)
Q Consensus 278 ~--~~~~~~~~~~~gH~~~-~~~~~~~~~i~~ 306 (308)
. .+++++.++++||.+. +.-..+.+-+.+
T Consensus 183 ~~~~~v~~~~~~g~gH~i~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 183 AAGANVEFHEYPGGGHEISPEELRDLREFLEK 214 (216)
T ss_dssp CTT-GEEEEEETT-SSS--HHHHHHHHHHHHH
T ss_pred hcCCCEEEEEcCCCCCCCCHHHHHHHHHHHhh
Confidence 4 3579999999999988 555544444433
No 88
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.77 E-value=7.3e-17 Score=118.92 Aligned_cols=259 Identities=12% Similarity=0.065 Sum_probs=168.1
Q ss_pred ccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHH-----HHHHHHcCCeEEEecCCCCcCCCC--c
Q 035721 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLT-----AVLFAKSGFATCAIDHQGHGFSDG--L 103 (308)
Q Consensus 31 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~-----~~~l~~~g~~v~~~d~~G~G~s~~--~ 103 (308)
.++..+.+..| .+++.++|..++ ++|++|-.|..+.+....++.+ +..+.++ |.|+-+|-||+-.-.+ +
T Consensus 22 ~~e~~V~T~~G-~v~V~V~Gd~~~--~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p 97 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYGDPKG--NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFP 97 (326)
T ss_pred ceeeeeccccc-cEEEEEecCCCC--CCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCC
Confidence 45667777777 688888887664 5888999999998876433432 4556666 9999999999855433 2
Q ss_pred cc-cCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhh
Q 035721 104 VA-HIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHL 182 (308)
Q Consensus 104 ~~-~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 182 (308)
.+ ...+++++++++..++++++.+ .++-+|...|++|..++|..+|++|-++||+++.+...... .|...++
T Consensus 98 ~~y~yPsmd~LAd~l~~VL~~f~lk-----~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwi--ew~~~K~ 170 (326)
T KOG2931|consen 98 EGYPYPSMDDLADMLPEVLDHFGLK-----SVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWI--EWAYNKV 170 (326)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCcc-----eEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHH--HHHHHHH
Confidence 22 2358999999999999999998 89999999999999999999999999999999865533211 1111111
Q ss_pred HHHhhh------hCCCcccccCCCCCCCc-ccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcC----CCCc
Q 035721 183 LFTVAW------LVPTWRVVPTRGSLPMV-SFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFE----EVEV 251 (308)
Q Consensus 183 ~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~~ 251 (308)
...+.. ......... .+.+. .-.+....+.+............+..++..+....|+..... .++|
T Consensus 171 ~s~~l~~~Gmt~~~~d~ll~H---~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc 247 (326)
T KOG2931|consen 171 SSNLLYYYGMTQGVKDYLLAH---HFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKC 247 (326)
T ss_pred HHHHHHhhchhhhHHHHHHHH---HhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccc
Confidence 110000 000000000 00000 011222223333322222222334444444433344433333 4569
Q ss_pred ceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhh
Q 035721 252 PMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVF 305 (308)
Q Consensus 252 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~ 305 (308)
|++++.|+..+.+ +.+..+...+...+.++..+.++|-.+. ++|..+++.+.
T Consensus 248 ~vllvvGd~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~ 300 (326)
T KOG2931|consen 248 PVLLVVGDNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFK 300 (326)
T ss_pred cEEEEecCCCchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHH
Confidence 9999999998876 5667777777556789999999999999 79999888764
No 89
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.77 E-value=3.1e-17 Score=116.58 Aligned_cols=254 Identities=18% Similarity=0.174 Sum_probs=153.8
Q ss_pred eeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc--cCCCcc
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA--HIPDLN 111 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~ 111 (308)
..+...||..+....|...+. ....++.-.+.+ -...+++.++..+.++||.|+.+|+||.|.|..... ..+.+.
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~--~~g~~~va~a~G-v~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~ 84 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGK--ASGRLVVAGATG-VGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYL 84 (281)
T ss_pred cccccCCCccCccccccCCCC--CCCcEEecccCC-cchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchh
Confidence 456678999999988865432 222344444444 444477999999999999999999999999987433 234566
Q ss_pred hHH-HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhh---------
Q 035721 112 PVV-EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEH--------- 181 (308)
Q Consensus 112 ~~~-~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~--------- 181 (308)
+++ .|+.++++.++... ...+...+|||+||.+.-.+. +++ +..+....+........+........
T Consensus 85 DwA~~D~~aal~~~~~~~-~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p 161 (281)
T COG4757 85 DWARLDFPAALAALKKAL-PGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGP 161 (281)
T ss_pred hhhhcchHHHHHHHHhhC-CCCceEEeeccccceeecccc-cCc-ccceeeEeccccccccchhhhhcccceeecccccc
Confidence 665 58999999888744 566899999999998655444 445 56666665555443332211000000
Q ss_pred hHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCC
Q 035721 182 LLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDD 261 (308)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 261 (308)
.+.......+........ ++....+++ + ......+..+...+.. ....+..+.+.+|++++...+|
T Consensus 162 ~lt~w~g~~p~~l~G~G~-d~p~~v~Rd-W--~RwcR~p~y~fddp~~----------~~~~q~yaaVrtPi~~~~~~DD 227 (281)
T COG4757 162 PLTFWKGYMPKDLLGLGS-DLPGTVMRD-W--ARWCRHPRYYFDDPAM----------RNYRQVYAAVRTPITFSRALDD 227 (281)
T ss_pred chhhccccCcHhhcCCCc-cCcchHHHH-H--HHHhcCccccccChhH----------hHHHHHHHHhcCceeeeccCCC
Confidence 000111111111111110 111111111 1 1112222222222222 2344556778999999999999
Q ss_pred cccChHHHHHHHHHhcCCCCcEEEecC----Cccccc-CCc-hhhHHHhhhc
Q 035721 262 VVCDPACVEELYKRAASKDKTLSIYPG----MWHQLI-GEP-EENVELVFGE 307 (308)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~gH~~~-~~~-~~~~~~i~~~ 307 (308)
+.+|+...+.+.+...+...+...++. -||+-. .++ |...++++.+
T Consensus 228 ~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w 279 (281)
T COG4757 228 PWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGW 279 (281)
T ss_pred CcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHh
Confidence 999999999999888655566666664 499988 666 7666666654
No 90
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.76 E-value=4.3e-17 Score=116.93 Aligned_cols=235 Identities=16% Similarity=0.109 Sum_probs=129.9
Q ss_pred eeEEcCCCcEEEEEEecCCCCCC-CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCC-cCCCCccccCCCcc
Q 035721 34 EYITNSRGLRLFTQWWTPLPPAK-TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGH-GFSDGLVAHIPDLN 111 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~~~~-~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~~~~~ 111 (308)
..+...+|.+|+.+.-.|++..+ ..++||+.+||+.... .+..++.+|+.+||+|+.+|.-.| |.|++.... +++.
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmd-h~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~e-ftms 82 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMD-HFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINE-FTMS 82 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGG-GGHHHHHHHHTTT--EEEE---B--------------HH
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHH-HHHHHHHHHhhCCeEEEeccccccccCCCCChhh-cchH
Confidence 45667789999998888876533 4589999999998877 447999999999999999998876 888887555 5888
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhh-hC
Q 035721 112 PVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAW-LV 190 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 190 (308)
...+++..+++++... +..++.++.-|+.|.+|...+.+- .+.-+|...+...+.. .+.+.... ++
T Consensus 83 ~g~~sL~~V~dwl~~~--g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~---------TLe~al~~Dyl 149 (294)
T PF02273_consen 83 IGKASLLTVIDWLATR--GIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRD---------TLEKALGYDYL 149 (294)
T ss_dssp HHHHHHHHHHHHHHHT--T---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHH---------HHHHHHSS-GG
T ss_pred HhHHHHHHHHHHHHhc--CCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHH---------HHHHHhccchh
Confidence 8899999999999966 788999999999999999999854 3777777666544221 11111100 00
Q ss_pred CCccc-ccCCCCCCCcccccHHHH-HHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHH
Q 035721 191 PTWRV-VPTRGSLPMVSFKEEWKR-KLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPAC 268 (308)
Q Consensus 191 ~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~ 268 (308)
..... .+....+........... +...... .........++.+.+|++.+++++|.+|....
T Consensus 150 ~~~i~~lp~dldfeGh~l~~~vFv~dc~e~~w----------------~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~e 213 (294)
T PF02273_consen 150 QLPIEQLPEDLDFEGHNLGAEVFVTDCFEHGW----------------DDLDSTINDMKRLSIPFIAFTANDDDWVKQSE 213 (294)
T ss_dssp GS-GGG--SEEEETTEEEEHHHHHHHHHHTT-----------------SSHHHHHHHHTT--S-EEEEEETT-TTS-HHH
T ss_pred hcchhhCCCcccccccccchHHHHHHHHHcCC----------------ccchhHHHHHhhCCCCEEEEEeCCCccccHHH
Confidence 00000 000001111111111111 1111110 00123345677889999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEecCCcccccCCchh
Q 035721 269 VEELYKRAASKDKTLSIYPGMWHQLIGEPEE 299 (308)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 299 (308)
+.++...+.+...+++.++|++|.+.+++-.
T Consensus 214 V~~~~~~~~s~~~klysl~Gs~HdL~enl~v 244 (294)
T PF02273_consen 214 VEELLDNINSNKCKLYSLPGSSHDLGENLVV 244 (294)
T ss_dssp HHHHHTT-TT--EEEEEETT-SS-TTSSHHH
T ss_pred HHHHHHhcCCCceeEEEecCccchhhhChHH
Confidence 9999988877789999999999999887753
No 91
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.75 E-value=1.4e-17 Score=121.21 Aligned_cols=228 Identities=19% Similarity=0.212 Sum_probs=154.2
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCC----c
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDG----L 103 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~----~ 103 (308)
.++.-+.+++..+|.+|..+...|...+.+.|.||-.||+++... .|..+. .++..||.|+.+|.||.|.|.. +
T Consensus 53 ~ve~ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g-~~~~~l-~wa~~Gyavf~MdvRGQg~~~~dt~~~ 130 (321)
T COG3458 53 RVEVYDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGG-EWHDML-HWAVAGYAVFVMDVRGQGSSSQDTADP 130 (321)
T ss_pred ceEEEEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCC-Cccccc-cccccceeEEEEecccCCCccccCCCC
Confidence 344556788899999999999999877677899999999998876 444443 3456799999999999998732 1
Q ss_pred ccc----------------CCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCc
Q 035721 104 VAH----------------IPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAM 166 (308)
Q Consensus 104 ~~~----------------~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 166 (308)
+.. .+-......|+..+++.+..-.. +.+++.+.|.|.||.+++.++...| +++++++.-|.
T Consensus 131 p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pf 209 (321)
T COG3458 131 PGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPF 209 (321)
T ss_pred CCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccc
Confidence 111 01123445677777777665444 7779999999999999999999887 79999988876
Q ss_pred CCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHH-HHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhh
Q 035721 167 CGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEW-KRKLALSSPRRPVARPRAATALELLRVSRDLQGR 245 (308)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (308)
..-..... ......+. ....+.+.- .+.-......+.. .+....
T Consensus 210 l~df~r~i-----------------------------~~~~~~~ydei~~y~k~h-----~~~e~~v~~TL~y-fD~~n~ 254 (321)
T COG3458 210 LSDFPRAI-----------------------------ELATEGPYDEIQTYFKRH-----DPKEAEVFETLSY-FDIVNL 254 (321)
T ss_pred cccchhhe-----------------------------eecccCcHHHHHHHHHhc-----CchHHHHHHHHhh-hhhhhH
Confidence 44221100 00000000 000000000 0001111111111 456666
Q ss_pred cCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 246 FEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 246 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
...+++|+|+..|--|++|||...-..++.+.. .+++.+++.-+|.-.
T Consensus 255 A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~-~K~i~iy~~~aHe~~ 302 (321)
T COG3458 255 AARIKVPVLMSVGLMDPVCPPSTQFAAYNALTT-SKTIEIYPYFAHEGG 302 (321)
T ss_pred HHhhccceEEeecccCCCCCChhhHHHhhcccC-CceEEEeeccccccC
Confidence 788999999999999999999999999999974 578888887778766
No 92
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.74 E-value=9.4e-17 Score=123.15 Aligned_cols=258 Identities=17% Similarity=0.134 Sum_probs=150.4
Q ss_pred CCcEEEEEEecCCCCCCCcceEEEEccCCCccc--h--------HHHHHHH---HHHHcCCeEEEecCCCCc-CCCCcc-
Q 035721 40 RGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS--W--------IVQLTAV---LFAKSGFATCAIDHQGHG-FSDGLV- 104 (308)
Q Consensus 40 ~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~--~--------~~~~~~~---~l~~~g~~v~~~d~~G~G-~s~~~~- 104 (308)
++..|.|..|+.-+. ....+|+++|++.+++. . ||+.++- .+-...|-||+.|-.|.+ .|+++.
T Consensus 34 ~~~~vay~T~Gtln~-~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s 112 (368)
T COG2021 34 SDARVAYETYGTLNA-EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSS 112 (368)
T ss_pred cCcEEEEEecccccc-cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCC
Confidence 467899999997765 45678999999988543 1 5554431 233345999999999875 444321
Q ss_pred ---c--------cCCCcchHHHHHHHHHHHHHHhcCCCCCEE-EEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcC
Q 035721 105 ---A--------HIPDLNPVVEDAISFFDSFRARHAPDLPAF-LYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQK 172 (308)
Q Consensus 105 ---~--------~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~ 172 (308)
. ...+++++++.-..++++++++ ++. ++|-||||+.|+.++..+|++|.++|.+++.......
T Consensus 113 ~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~-----~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~ 187 (368)
T COG2021 113 INPGGKPYGSDFPVITIRDMVRAQRLLLDALGIK-----KLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQ 187 (368)
T ss_pred cCCCCCccccCCCcccHHHHHHHHHHHHHhcCcc-----eEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHH
Confidence 1 1235667777777788888887 666 9999999999999999999999999998875443211
Q ss_pred CCCCchhhhhHHHhhhhCCCcccccCCC-CCCCccc-----------cc----------------------HHHHHHHhh
Q 035721 173 FKPPWPLEHLLFTVAWLVPTWRVVPTRG-SLPMVSF-----------KE----------------------EWKRKLALS 218 (308)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----------~~----------------------~~~~~~~~~ 218 (308)
. .......+..-..-|.+.-..... ....... +. ....+.+..
T Consensus 188 ~---ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~ 264 (368)
T COG2021 188 N---IAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLD 264 (368)
T ss_pred H---HHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHH
Confidence 0 000000000000011110000000 0000000 00 000011110
Q ss_pred -CCCCCCCcchHHHHHHHHHHH---------HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEec-
Q 035721 219 -SPRRPVARPRAATALELLRVS---------RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYP- 287 (308)
Q Consensus 219 -~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~- 287 (308)
.-..+........+..+.+.. .++...++++++|++++.-+.|.++|++..+++.+.++...+ +++++
T Consensus 265 ~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~-~~~i~S 343 (368)
T COG2021 265 YQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGA-LREIDS 343 (368)
T ss_pred HHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCc-eEEecC
Confidence 000111111111112222221 123344788999999999999999999999999999964333 65554
Q ss_pred CCccccc-CCchhhHHHhhhc
Q 035721 288 GMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 288 ~~gH~~~-~~~~~~~~~i~~~ 307 (308)
..||.-+ .+.+.+...|.++
T Consensus 344 ~~GHDaFL~e~~~~~~~i~~f 364 (368)
T COG2021 344 PYGHDAFLVESEAVGPLIRKF 364 (368)
T ss_pred CCCchhhhcchhhhhHHHHHH
Confidence 6899998 7676666666554
No 93
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.74 E-value=1.6e-17 Score=101.51 Aligned_cols=79 Identities=37% Similarity=0.654 Sum_probs=70.9
Q ss_pred CcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHH
Q 035721 41 GLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISF 120 (308)
Q Consensus 41 g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 120 (308)
|.+|+++.|.|++. ++.+|+++||++.++. .+..+++.|+++||.|+++|+||||.|++......+++++++|+..+
T Consensus 1 G~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~-ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~ 77 (79)
T PF12146_consen 1 GTKLFYRRWKPENP--PKAVVVIVHGFGEHSG-RYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQF 77 (79)
T ss_pred CcEEEEEEecCCCC--CCEEEEEeCCcHHHHH-HHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHH
Confidence 67899999998874 6999999999998888 45899999999999999999999999998777777899999999988
Q ss_pred HH
Q 035721 121 FD 122 (308)
Q Consensus 121 l~ 122 (308)
++
T Consensus 78 ~~ 79 (79)
T PF12146_consen 78 IQ 79 (79)
T ss_pred hC
Confidence 64
No 94
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.73 E-value=2.6e-17 Score=127.83 Aligned_cols=129 Identities=17% Similarity=0.204 Sum_probs=97.3
Q ss_pred CCcEEEEEEecC--CCCCCCcceEEEEccCCCccchHHHH---------HHHHHHHcCCeEEEecCCCCcCCCCccccCC
Q 035721 40 RGLRLFTQWWTP--LPPAKTLGVLCVVHGFTGESSWIVQL---------TAVLFAKSGFATCAIDHQGHGFSDGLVAHIP 108 (308)
Q Consensus 40 ~g~~l~~~~~~~--~~~~~~~~~vv~~hG~~~~~~~~~~~---------~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~ 108 (308)
||++|...++.| ..+ .+.|+||..|+++......... ....|+++||.|+..|.||.|.|.+.....
T Consensus 1 DGv~L~adv~~P~~~~~-~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~- 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGG-GPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM- 78 (272)
T ss_dssp TS-EEEEEEEEE--TTS-SSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT-
T ss_pred CCCEEEEEEEecCCCCC-CcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC-
Confidence 789999999999 433 6789999999998654211111 112388999999999999999999876642
Q ss_pred CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCc
Q 035721 109 DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQ 171 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~ 171 (308)
.....+|..++|+++..+.+...+|.++|.|++|..++.+|...|..+++++...+......
T Consensus 79 -~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 79 -SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp -SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCC
T ss_pred -ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccc
Confidence 56678999999999998755566999999999999999999988889999999888766554
No 95
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.71 E-value=3.1e-16 Score=126.27 Aligned_cols=112 Identities=14% Similarity=0.049 Sum_probs=85.7
Q ss_pred CCcceEEEEccCCCccc--hHHHHHHHHHHH--cCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-C
Q 035721 56 KTLGVLCVVHGFTGESS--WIVQLTAVLFAK--SGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-P 130 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~--~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~-~ 130 (308)
..+|++|++||++.+.. .+...+.+.|.. ..|+|+++|++|+|.+..+.... .....++++.++++.+....+ +
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~-~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAA-YTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccc-cHHHHHHHHHHHHHHHHHhhCCC
Confidence 34789999999987542 132346665542 25999999999999886553332 345677888888888864322 4
Q ss_pred CCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 131 DLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 131 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
..+++|+||||||.+|..++.+.|++|.++++++|...
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 56999999999999999999999999999999999754
No 96
>PRK10162 acetyl esterase; Provisional
Probab=99.71 E-value=6.3e-15 Score=116.79 Aligned_cols=217 Identities=18% Similarity=0.185 Sum_probs=128.9
Q ss_pred ccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCC---ccchHHHHHHHHHHH-cCCeEEEecCCCCcCCCCcccc
Q 035721 31 HSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTG---ESSWIVQLTAVLFAK-SGFATCAIDHQGHGFSDGLVAH 106 (308)
Q Consensus 31 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~ 106 (308)
.++..+...+| .+..++|.|.. ...|+||++||.+. +.. .+..+++.|+. .|+.|+++|+|.....
T Consensus 57 ~~~~~i~~~~g-~i~~~~y~P~~--~~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~Vv~vdYrlape~------ 126 (318)
T PRK10162 57 TRAYMVPTPYG-QVETRLYYPQP--DSQATLFYLHGGGFILGNLD-THDRIMRLLASYSGCTVIGIDYTLSPEA------ 126 (318)
T ss_pred EEEEEEecCCC-ceEEEEECCCC--CCCCEEEEEeCCcccCCCch-hhhHHHHHHHHHcCCEEEEecCCCCCCC------
Confidence 34455666666 58888888854 34689999999773 333 45677888877 4999999999964322
Q ss_pred CCCcchHHHHHHHHHHHHHHh---cC-CCCCEEEEEechhhHHHHHHHHhc------CCCccEEEEeCCcCCCCcCCCCC
Q 035721 107 IPDLNPVVEDAISFFDSFRAR---HA-PDLPAFLYSESLGGAIALYITLRQ------KGAWDGLILNGAMCGISQKFKPP 176 (308)
Q Consensus 107 ~~~~~~~~~d~~~~l~~~~~~---~~-~~~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~~~~~~~~~~ 176 (308)
.+....+|+.++++++... .+ +..+++|+|+|+||.+|+.++.+. +.++++++++.|....... ..
T Consensus 127 --~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~--~s 202 (318)
T PRK10162 127 --RFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDS--VS 202 (318)
T ss_pred --CCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCC--hh
Confidence 2333456666666665432 22 456999999999999999888753 3578999999886653210 00
Q ss_pred chhhhhHHHhhhhCCCcccccCCCCCCCcccccHH---HHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcce
Q 035721 177 WPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEW---KRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPM 253 (308)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 253 (308)
.. ..... .. .+.... ....+..+..... .+.. ......+..--.|+
T Consensus 203 ------~~---~~~~~---------~~--~l~~~~~~~~~~~y~~~~~~~~-~p~~----------~p~~~~l~~~lPp~ 251 (318)
T PRK10162 203 ------RR---LLGGV---------WD--GLTQQDLQMYEEAYLSNDADRE-SPYY----------CLFNNDLTRDVPPC 251 (318)
T ss_pred ------HH---HhCCC---------cc--ccCHHHHHHHHHHhCCCccccC-Cccc----------CcchhhhhcCCCCe
Confidence 00 00000 00 000000 0111111100000 0000 00001121122599
Q ss_pred EEEeeCCCcccChHHHHHHHHHhcC--CCCcEEEecCCccccc
Q 035721 254 LICHGGDDVVCDPACVEELYKRAAS--KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 254 l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 294 (308)
++++|+.|.+.+ ..+.+++.+.. ..+++++++|..|.+.
T Consensus 252 ~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H~f~ 292 (318)
T PRK10162 252 FIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGTLHAFL 292 (318)
T ss_pred EEEecCCCcCcC--hHHHHHHHHHHcCCCEEEEEECCCceehh
Confidence 999999999874 56677777643 3589999999999876
No 97
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.70 E-value=9.2e-17 Score=114.15 Aligned_cols=153 Identities=20% Similarity=0.188 Sum_probs=99.7
Q ss_pred EEEEccCCCccch-HHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEe
Q 035721 61 LCVVHGFTGESSW-IVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSE 139 (308)
Q Consensus 61 vv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~ 139 (308)
|+++||++++... |+..+.+.|... ++|-..++ +. .+.+++...+.+.+..+. .++++|||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~------~~-----P~~~~W~~~l~~~i~~~~------~~~ilVaH 62 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW------DN-----PDLDEWVQALDQAIDAID------EPTILVAH 62 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--------TS-------HHHHHHHHHHCCHC-T------TTEEEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc------CC-----CCHHHHHHHHHHHHhhcC------CCeEEEEe
Confidence 6899999988653 345667777665 77777666 11 256677776666666432 27999999
Q ss_pred chhhHHHHHHH-HhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhh
Q 035721 140 SLGGAIALYIT-LRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALS 218 (308)
Q Consensus 140 S~Gg~~a~~~a-~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (308)
|+|+..+++++ .....+|++++|++|+............ . .+.
T Consensus 63 SLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~~~--------------------~-~f~--------------- 106 (171)
T PF06821_consen 63 SLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFPPEL--------------------D-GFT--------------- 106 (171)
T ss_dssp THHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCTCGG--------------------C-CCT---------------
T ss_pred CHHHHHHHHHHhhcccccccEEEEEcCCCcccccchhhhc--------------------c-ccc---------------
Confidence 99999999999 7777899999999996431000000000 0 000
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 219 SPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
. .....+.+|.++|.+++|+++|.+.++.+++.+ +++++.++++||+..
T Consensus 107 ----------------------~--~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l---~a~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 107 ----------------------P--LPRDPLPFPSIVIASDNDPYVPFERAQRLAQRL---GAELIILGGGGHFNA 155 (171)
T ss_dssp ----------------------T--SHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH---T-EEEEETS-TTSSG
T ss_pred ----------------------c--CcccccCCCeEEEEcCCCCccCHHHHHHHHHHc---CCCeEECCCCCCccc
Confidence 0 011223467799999999999999999999999 689999999999877
No 98
>COG0400 Predicted esterase [General function prediction only]
Probab=99.70 E-value=5.5e-16 Score=112.57 Aligned_cols=173 Identities=20% Similarity=0.182 Sum_probs=114.7
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCC--CcCCCC---ccccCCCcchHH---HHHHHHHHHHHHh
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQG--HGFSDG---LVAHIPDLNPVV---EDAISFFDSFRAR 127 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G--~G~s~~---~~~~~~~~~~~~---~d~~~~l~~~~~~ 127 (308)
+..|+||++||+|++...+. ++.+.+..+ +.++.+.=+- .|.-.. .....++.++.. ..+.++++.+..+
T Consensus 16 p~~~~iilLHG~Ggde~~~~-~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 16 PAAPLLILLHGLGGDELDLV-PLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCcEEEEEecCCCChhhhh-hhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 45789999999998766343 455555454 6665543211 010000 001112333333 3444455555555
Q ss_pred cC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcc
Q 035721 128 HA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVS 206 (308)
Q Consensus 128 ~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (308)
.+ +.++++++|+|.||++++.+..++|+.++++|++++.......
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~---------------------------------- 139 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE---------------------------------- 139 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc----------------------------------
Confidence 54 6789999999999999999999999999999999986543310
Q ss_pred cccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcC--CCCcEE
Q 035721 207 FKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAAS--KDKTLS 284 (308)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~ 284 (308)
..-..-.+|+++++|+.|+++|...+.++.+.+.. .+++..
T Consensus 140 -------------------------------------~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~ 182 (207)
T COG0400 140 -------------------------------------LLPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVR 182 (207)
T ss_pred -------------------------------------cccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEE
Confidence 00012257999999999999999998888887753 467888
Q ss_pred EecCCccccc-CCchhhHH
Q 035721 285 IYPGMWHQLI-GEPEENVE 302 (308)
Q Consensus 285 ~~~~~gH~~~-~~~~~~~~ 302 (308)
.++ .||.+. +.-+...+
T Consensus 183 ~~~-~GH~i~~e~~~~~~~ 200 (207)
T COG0400 183 WHE-GGHEIPPEELEAARS 200 (207)
T ss_pred Eec-CCCcCCHHHHHHHHH
Confidence 888 999988 55544443
No 99
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.68 E-value=4.1e-16 Score=120.39 Aligned_cols=112 Identities=13% Similarity=0.131 Sum_probs=84.1
Q ss_pred CcceEEEEccCCCcc-chHHHHHHHHHH-HcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-CCCC
Q 035721 57 TLGVLCVVHGFTGES-SWIVQLTAVLFA-KSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PDLP 133 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~-~~~~~~~~~~l~-~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~ 133 (308)
.+|++|++||++++. ..+...+.+.+. ..+|+|+++|+++++.+.... ...+.....+++..+++.+....+ +.++
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~-a~~~~~~v~~~la~~l~~L~~~~g~~~~~ 113 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ-AVNNTRVVGAELAKFLDFLVDNTGLSLEN 113 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH-HHHhHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 478999999999887 333345565444 457999999999984433221 112455667788888888765422 4468
Q ss_pred EEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCC
Q 035721 134 AFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGI 169 (308)
Q Consensus 134 ~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 169 (308)
++++|||+||.+|..++.+.|++++++++++|....
T Consensus 114 i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 114 VHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred EEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 999999999999999999999999999999987543
No 100
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.68 E-value=3.7e-15 Score=112.84 Aligned_cols=239 Identities=18% Similarity=0.144 Sum_probs=95.0
Q ss_pred CcceEEEEccCCCccc--hHHHHHHHHHHHcCCeEEEecCC----CCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-
Q 035721 57 TLGVLCVVHGFTGESS--WIVQLTAVLFAKSGFATCAIDHQ----GHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA- 129 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~- 129 (308)
++.+||||.|++..-. .|...+++.|.+.||.|+-+-++ |+|. .+++.-++||.+++++++...+
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~--------~SL~~D~~eI~~~v~ylr~~~~g 103 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGT--------SSLDRDVEEIAQLVEYLRSEKGG 103 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S----------HHHHHHHHHHHHHHHHHHS--
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCc--------chhhhHHHHHHHHHHHHHHhhcc
Confidence 4668999999876432 46788999998789999999865 4443 3778889999999999987721
Q ss_pred --CCCCEEEEEechhhHHHHHHHHhcC-----CCccEEEEeCCcCCCCcCCCCC---chhhhhHHHhhhhCCCccccc-C
Q 035721 130 --PDLPAFLYSESLGGAIALYITLRQK-----GAWDGLILNGAMCGISQKFKPP---WPLEHLLFTVAWLVPTWRVVP-T 198 (308)
Q Consensus 130 --~~~~~~l~G~S~Gg~~a~~~a~~~p-----~~v~~~vl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~ 198 (308)
...+|+|+|||.|+.-+++|+.... ..|+++||-+|........... ..................... .
T Consensus 104 ~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~l 183 (303)
T PF08538_consen 104 HFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEIL 183 (303)
T ss_dssp ----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG
T ss_pred ccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCcee
Confidence 4679999999999999999998753 5799999999976544222111 112223333222211110000 0
Q ss_pred CCCCCCccc-ccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHH-HHHHHHHh
Q 035721 199 RGSLPMVSF-KEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPAC-VEELYKRA 276 (308)
Q Consensus 199 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~ 276 (308)
...+....+ ..+.....+..-. ....-..++........+.+.+..++.|+|++.+++|..+|... .+.+.+++
T Consensus 184 p~~~~~~~~~~~PiTA~Rf~SL~----s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw 259 (303)
T PF08538_consen 184 PREFTPLVFYDTPITAYRFLSLA----SPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERW 259 (303)
T ss_dssp ----GGTTT-SS---HHHHHT-S-----SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT---------------
T ss_pred eccccccccCCCcccHHHHHhcc----CCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceeccccccccccccc
Confidence 000111111 1111111111000 00011111111111134556688889999999999999998643 23344443
Q ss_pred cC---C---CCcEEEecCCccccc-CCch----hhHHHhhhc
Q 035721 277 AS---K---DKTLSIYPGMWHQLI-GEPE----ENVELVFGE 307 (308)
Q Consensus 277 ~~---~---~~~~~~~~~~gH~~~-~~~~----~~~~~i~~~ 307 (308)
.. + ...-.++||++|.+- ...+ .+++.|.++
T Consensus 260 ~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~f 301 (303)
T PF08538_consen 260 KAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKF 301 (303)
T ss_dssp ------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccc
Confidence 21 1 123558999999998 4333 355555554
No 101
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.66 E-value=1.2e-14 Score=116.01 Aligned_cols=106 Identities=10% Similarity=0.031 Sum_probs=83.7
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
+|+||++..+.++.....+.+++.|.+ |+.|+..|+..-+..+..... .+++++++-+.+++++++. +++++
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~-f~ldDYi~~l~~~i~~~G~------~v~l~ 173 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGK-FDLEDYIDYLIEFIRFLGP------DIHVI 173 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCC-CCHHHHHHHHHHHHHHhCC------CCcEE
Confidence 378999999887766566889999998 999999999877755433333 4889999888888877632 58999
Q ss_pred EechhhHHHHHHHHhc-----CCCccEEEEeCCcCCCCc
Q 035721 138 SESLGGAIALYITLRQ-----KGAWDGLILNGAMCGISQ 171 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~~~ 171 (308)
|+|+||..++.+++.. |.+++++++++++..+..
T Consensus 174 GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 174 AVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred EEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC
Confidence 9999999977665554 667999999999887653
No 102
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.66 E-value=6.4e-15 Score=113.01 Aligned_cols=111 Identities=20% Similarity=0.218 Sum_probs=92.0
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHc---CCeEEEecCCCCcCCCCc-----cccCCCcchHHHHHHHHHHHHHHhcC
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKS---GFATCAIDHQGHGFSDGL-----VAHIPDLNPVVEDAISFFDSFRARHA 129 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~---g~~v~~~d~~G~G~s~~~-----~~~~~~~~~~~~d~~~~l~~~~~~~~ 129 (308)
+..+++++|.+|-.+ |+..+.+.|.++ .+.|+++.+.||-.++.. ....+++++.++...++++.+.....
T Consensus 2 ~~li~~IPGNPGlv~-fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE-FYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHH-HHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 568999999999988 667788877744 799999999999877765 34557888888888888887776432
Q ss_pred -CCCCEEEEEechhhHHHHHHHHhcC---CCccEEEEeCCcCCC
Q 035721 130 -PDLPAFLYSESLGGAIALYITLRQK---GAWDGLILNGAMCGI 169 (308)
Q Consensus 130 -~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~ 169 (308)
...+++++|||.|++++++++.+.+ .+|.+++++-|...-
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 4568999999999999999999999 789999999987553
No 103
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.65 E-value=1.3e-14 Score=115.36 Aligned_cols=146 Identities=16% Similarity=0.091 Sum_probs=113.1
Q ss_pred ccccccccccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHH-----HHHHHHHHHcCCeEEEecCC
Q 035721 21 DEFYARHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIV-----QLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~ 95 (308)
.++....+++.++..+++.||.-+........ . .++|+|++.||+.+++..|. +.++=.|+++||+|..-+.|
T Consensus 38 ~~~i~~~gy~~E~h~V~T~DgYiL~lhRIp~~-~-~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~R 115 (403)
T KOG2624|consen 38 PEIIEKYGYPVEEHEVTTEDGYILTLHRIPRG-K-KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNR 115 (403)
T ss_pred HHHHHHcCCceEEEEEEccCCeEEEEeeecCC-C-CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCc
Confidence 34455668899999999999986666544333 2 57999999999988876332 35677889999999999999
Q ss_pred CCcCCCCcc---------ccCCCcchHH-HHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC---CccEEEE
Q 035721 96 GHGFSDGLV---------AHIPDLNPVV-EDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG---AWDGLIL 162 (308)
Q Consensus 96 G~G~s~~~~---------~~~~~~~~~~-~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl 162 (308)
|.-.|.... --.+++.+++ .|+-+.|+++.... +.++++.+|||.|+...+..+...|+ +|+..++
T Consensus 116 Gn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T-~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~a 194 (403)
T KOG2624|consen 116 GNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKT-GQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIA 194 (403)
T ss_pred CcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhc-cccceEEEEEEccchhheehhcccchhhhhhheeee
Confidence 977665411 1123566654 59999999988765 67799999999999999988888764 7999999
Q ss_pred eCCcCCC
Q 035721 163 NGAMCGI 169 (308)
Q Consensus 163 ~~~~~~~ 169 (308)
++|....
T Consensus 195 LAP~~~~ 201 (403)
T KOG2624|consen 195 LAPAAFP 201 (403)
T ss_pred ecchhhh
Confidence 9998743
No 104
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.64 E-value=7.2e-14 Score=107.49 Aligned_cols=246 Identities=13% Similarity=0.045 Sum_probs=142.2
Q ss_pred EEEEecCCCC-CCCcceEEEEccCCCccchHHHHH-HHHHHHcCCeEEEecCCCCcCCCCccccCC---Ccc-------h
Q 035721 45 FTQWWTPLPP-AKTLGVLCVVHGFTGESSWIVQLT-AVLFAKSGFATCAIDHQGHGFSDGLVAHIP---DLN-------P 112 (308)
Q Consensus 45 ~~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~-~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~---~~~-------~ 112 (308)
++....|... .+.+|++|.++|.|.+.-+.-+.+ +..|.++|+..+.+..|-||...+...... +.. .
T Consensus 78 ~~~~~~P~~~~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~ 157 (348)
T PF09752_consen 78 RFQLLLPKRWDSPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRA 157 (348)
T ss_pred EEEEEECCccccCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhH
Confidence 3444445543 356899999999887654332344 788888899999999999998765332211 122 2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCC---CcCCCCCchhhhhHHHhhhh
Q 035721 113 VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGI---SQKFKPPWPLEHLLFTVAWL 189 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 189 (308)
.+.+...++.++..+ +..++.+.|.||||.+|...+...|..+..+-++++.... ......... ....+..-
T Consensus 158 ~i~E~~~Ll~Wl~~~--G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i---~W~~L~~q 232 (348)
T PF09752_consen 158 TILESRALLHWLERE--GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSI---NWDALEKQ 232 (348)
T ss_pred HHHHHHHHHHHHHhc--CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCC---CHHHHHHH
Confidence 345667777888777 7779999999999999999999999877766666654321 111000000 00000000
Q ss_pred CCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcc-----eEEEeeCCCccc
Q 035721 190 VPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVP-----MLICHGGDDVVC 264 (308)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-----~l~i~g~~D~~~ 264 (308)
+.................. ..... .... ... ...........+....+.+..+| +.+|.+++|..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~---~~~-~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYV 303 (348)
T PF09752_consen 233 FEDTVYEEEISDIPAQNKS----LPLDS-MEER---RRD-REALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYV 303 (348)
T ss_pred hcccchhhhhcccccCccc----ccchh-hccc---cch-HHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEe
Confidence 0000000000000000000 00000 0000 001 11122222212223334444333 788999999999
Q ss_pred ChHHHHHHHHHhcCCCCcEEEecCCccccc--CCchhhHHHhhhc
Q 035721 265 DPACVEELYKRAASKDKTLSIYPGMWHQLI--GEPEENVELVFGE 307 (308)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~--~~~~~~~~~i~~~ 307 (308)
|...+..+.+.+ |++++..+++ ||..- .+.+.|.+.|.+-
T Consensus 304 Pr~~v~~Lq~~W--PGsEvR~l~g-GHVsA~L~~q~~fR~AI~Da 345 (348)
T PF09752_consen 304 PRHGVLSLQEIW--PGSEVRYLPG-GHVSAYLLHQEAFRQAIYDA 345 (348)
T ss_pred chhhcchHHHhC--CCCeEEEecC-CcEEEeeechHHHHHHHHHH
Confidence 999999999999 7899999985 99866 7788888888763
No 105
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.63 E-value=1.6e-15 Score=117.69 Aligned_cols=141 Identities=18% Similarity=0.192 Sum_probs=89.9
Q ss_pred cccccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchH-----------------HHHHHHHHHHcCCe
Q 035721 26 RHSVSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWI-----------------VQLTAVLFAKSGFA 88 (308)
Q Consensus 26 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~-----------------~~~~~~~l~~~g~~ 88 (308)
..++..+...+.+.++..+...+..|++...+.|+||++||-+++.+.. -..++..|+++||.
T Consensus 83 rdGY~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYV 162 (390)
T PF12715_consen 83 RDGYTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYV 162 (390)
T ss_dssp ETTEEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSE
T ss_pred cCCeEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCE
Confidence 4567777888888899999999898987557789999999987654210 12357889999999
Q ss_pred EEEecCCCCcCCCCccccC----CCcchH---------------HHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHH
Q 035721 89 TCAIDHQGHGFSDGLVAHI----PDLNPV---------------VEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALY 148 (308)
Q Consensus 89 v~~~d~~G~G~s~~~~~~~----~~~~~~---------------~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~ 148 (308)
|+++|.+|+|+........ ++...+ +-|...+++++..... +.++|.++|+||||..++.
T Consensus 163 vla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~ 242 (390)
T PF12715_consen 163 VLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWW 242 (390)
T ss_dssp EEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHH
T ss_pred EEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHH
Confidence 9999999999876533211 111111 1244557777766655 7889999999999999999
Q ss_pred HHHhcCCCccEEEEeCCcC
Q 035721 149 ITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 149 ~a~~~p~~v~~~vl~~~~~ 167 (308)
+++..+ +|++.|..+-..
T Consensus 243 LaALDd-RIka~v~~~~l~ 260 (390)
T PF12715_consen 243 LAALDD-RIKATVANGYLC 260 (390)
T ss_dssp HHHH-T-T--EEEEES-B-
T ss_pred HHHcch-hhHhHhhhhhhh
Confidence 999875 798888776644
No 106
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.60 E-value=9.8e-14 Score=93.03 Aligned_cols=165 Identities=15% Similarity=0.107 Sum_probs=113.0
Q ss_pred CcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCC-----CCccccCCCcchHHHHHHHHHHHHHHhcCC
Q 035721 57 TLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFS-----DGLVAHIPDLNPVVEDAISFFDSFRARHAP 130 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s-----~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~ 130 (308)
...+||+.||.+.+.+ .+.+.++..|+.+|+.|..++++-.-.. .+++....-..++...+.++-+.+ .
T Consensus 13 ~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l-----~ 87 (213)
T COG3571 13 APVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGL-----A 87 (213)
T ss_pred CCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcc-----c
Confidence 4568899999988765 2457889999999999999998764322 122222112233333333333333 3
Q ss_pred CCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccH
Q 035721 131 DLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEE 210 (308)
Q Consensus 131 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (308)
..+.++-|+||||.++..++....-.|+++++++-++.......
T Consensus 88 ~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe------------------------------------ 131 (213)
T COG3571 88 EGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPE------------------------------------ 131 (213)
T ss_pred CCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCcc------------------------------------
Confidence 34899999999999999988876656999999886443221100
Q ss_pred HHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCc
Q 035721 211 WKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMW 290 (308)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 290 (308)
..-.+.+..+++|++|.+|+.|++-..+.+.... -++..++++++++.
T Consensus 132 -----------------------------~~Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y~---ls~~iev~wl~~ad 179 (213)
T COG3571 132 -----------------------------QLRTEHLTGLKTPTLITQGTRDEFGTRDEVAGYA---LSDPIEVVWLEDAD 179 (213)
T ss_pred -----------------------------cchhhhccCCCCCeEEeecccccccCHHHHHhhh---cCCceEEEEeccCc
Confidence 0112557789999999999999998777663322 22578999999999
Q ss_pred cccc
Q 035721 291 HQLI 294 (308)
Q Consensus 291 H~~~ 294 (308)
|.+-
T Consensus 180 HDLk 183 (213)
T COG3571 180 HDLK 183 (213)
T ss_pred cccc
Confidence 9875
No 107
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.58 E-value=5.4e-14 Score=99.96 Aligned_cols=180 Identities=14% Similarity=0.124 Sum_probs=127.2
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC-CCcCCCCccc-------c
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ-GHGFSDGLVA-------H 106 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~-G~G~s~~~~~-------~ 106 (308)
+....+|.+ .+..+..+. +..||++-...|....-.+..++.++.+||.|+++|+. |--.|...+. .
T Consensus 21 ~~~~v~gld--aYv~gs~~~---~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~ 95 (242)
T KOG3043|consen 21 REEEVGGLD--AYVVGSTSS---KKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMK 95 (242)
T ss_pred ceEeecCee--EEEecCCCC---CeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHh
Confidence 333444543 333444432 35677777766655434578899999999999999975 4122211000 0
Q ss_pred CCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHh
Q 035721 107 IPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186 (308)
Q Consensus 107 ~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
..+.+....++..++++++... +..+|.++|++|||.++..+....+ .+.+++.+-|...
T Consensus 96 ~~~~~~~~~~i~~v~k~lk~~g-~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~------------------ 155 (242)
T KOG3043|consen 96 GHSPPKIWKDITAVVKWLKNHG-DSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFV------------------ 155 (242)
T ss_pred cCCcccchhHHHHHHHHHHHcC-CcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcC------------------
Confidence 1245555679999999999663 5789999999999999999888887 5777776655311
Q ss_pred hhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccCh
Q 035721 187 AWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDP 266 (308)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~ 266 (308)
+ .....++++|++++.|+.|.++|+
T Consensus 156 ------------------------------------------------------d-~~D~~~vk~Pilfl~ae~D~~~p~ 180 (242)
T KOG3043|consen 156 ------------------------------------------------------D-SADIANVKAPILFLFAELDEDVPP 180 (242)
T ss_pred ------------------------------------------------------C-hhHHhcCCCCEEEEeecccccCCH
Confidence 1 133567889999999999999999
Q ss_pred HHHHHHHHHhcCC---CCcEEEecCCccccc
Q 035721 267 ACVEELYKRAASK---DKTLSIYPGMWHQLI 294 (308)
Q Consensus 267 ~~~~~~~~~~~~~---~~~~~~~~~~gH~~~ 294 (308)
+....+.+.+... +.++.+++|.+|.+.
T Consensus 181 ~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 181 KDVKAWEEKLKENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred HHHHHHHHHHhcCcccceeEEEcCCccchhh
Confidence 9999988888642 247999999999876
No 108
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.58 E-value=3.3e-13 Score=100.46 Aligned_cols=179 Identities=19% Similarity=0.162 Sum_probs=119.0
Q ss_pred EecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHh
Q 035721 48 WWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRAR 127 (308)
Q Consensus 48 ~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~ 127 (308)
++.|.+. ..-|+|||+||+..... ++..+.++++++||.|+.+|+...+.. ......+++.++++++...
T Consensus 8 v~~P~~~-g~yPVv~f~~G~~~~~s-~Ys~ll~hvAShGyIVV~~d~~~~~~~--------~~~~~~~~~~~vi~Wl~~~ 77 (259)
T PF12740_consen 8 VYYPSSA-GTYPVVLFLHGFLLINS-WYSQLLEHVASHGYIVVAPDLYSIGGP--------DDTDEVASAAEVIDWLAKG 77 (259)
T ss_pred EEecCCC-CCcCEEEEeCCcCCCHH-HHHHHHHHHHhCceEEEEecccccCCC--------CcchhHHHHHHHHHHHHhc
Confidence 3445554 55899999999996666 568999999999999999997654331 2222345555555554432
Q ss_pred c--------C-CCCCEEEEEechhhHHHHHHHHhc-----CCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCc
Q 035721 128 H--------A-PDLPAFLYSESLGGAIALYITLRQ-----KGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTW 193 (308)
Q Consensus 128 ~--------~-~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (308)
. . +-.++.|.|||-||-+|..++..+ ..+++++|+++|..+.......
T Consensus 78 L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~~------------------ 139 (259)
T PF12740_consen 78 LESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQT------------------ 139 (259)
T ss_pred chhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccCC------------------
Confidence 1 0 556899999999999999999887 4589999999997643311100
Q ss_pred ccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcc--------cC
Q 035721 194 RVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVV--------CD 265 (308)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~--------~~ 265 (308)
.... ......--+..+|+++|..+-+.. +-
T Consensus 140 ---------~P~v---------------------------------~~~~p~s~~~~~P~lviGtGLg~~~~~~~~~~Ca 177 (259)
T PF12740_consen 140 ---------EPPV---------------------------------LTYTPQSFDFSMPALVIGTGLGGEPRNPLFPPCA 177 (259)
T ss_pred ---------CCcc---------------------------------ccCcccccCCCCCeEEEecccCcccccccCCCCC
Confidence 0000 000111223568999998777742 22
Q ss_pred h--HHHHHHHHHhcCCCCcEEEecCCccccc-CCc
Q 035721 266 P--ACVEELYKRAASKDKTLSIYPGMWHQLI-GEP 297 (308)
Q Consensus 266 ~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~ 297 (308)
+ ..-+++++.+.. .+...+..+.||+-+ +..
T Consensus 178 P~g~n~~~Ff~~~~~-p~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 178 PAGVNYREFFDECKP-PSWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred CCCCCHHHHHHhcCC-CEEEEEeCCCCchHhhcCC
Confidence 2 346788888864 466677789999988 554
No 109
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.58 E-value=2.2e-13 Score=97.90 Aligned_cols=181 Identities=17% Similarity=0.116 Sum_probs=103.5
Q ss_pred EEEEccCCCccchH-HHHHHHHHHHcC--CeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 61 LCVVHGFTGESSWI-VQLTAVLFAKSG--FATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 61 vv~~hG~~~~~~~~-~~~~~~~l~~~g--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
|+++||+.++.... .+.+.+.+.+.+ ..+.++|++ .......+.+.++++....+ .+.|+
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~~~~-----~~~li 64 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEELKPE-----NVVLI 64 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhCCCC-----CeEEE
Confidence 79999999877533 235566676654 456666665 24444556666666655443 69999
Q ss_pred EechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHh
Q 035721 138 SESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLAL 217 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (308)
|.|+||..|..++.+++ +++ |+++|...+... +...+......... +.........
T Consensus 65 GSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~-------------l~~~iG~~~~~~~~----e~~~~~~~~~---- 120 (187)
T PF05728_consen 65 GSSLGGFYATYLAERYG--LPA-VLINPAVRPYEL-------------LQDYIGEQTNPYTG----ESYELTEEHI---- 120 (187)
T ss_pred EEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHH-------------HHHhhCccccCCCC----ccceechHhh----
Confidence 99999999999999886 445 888987653311 11111110000000 0000000000
Q ss_pred hCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCcccccCCc
Q 035721 218 SSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEP 297 (308)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 297 (308)
.....+......-..+++++.++.|.+++.+.+...+ .++..++.+|++|.+.. -
T Consensus 121 -------------------~~l~~l~~~~~~~~~~~lvll~~~DEvLd~~~a~~~~-----~~~~~~i~~ggdH~f~~-f 175 (187)
T PF05728_consen 121 -------------------EELKALEVPYPTNPERYLVLLQTGDEVLDYREAVAKY-----RGCAQIIEEGGDHSFQD-F 175 (187)
T ss_pred -------------------hhcceEeccccCCCccEEEEEecCCcccCHHHHHHHh-----cCceEEEEeCCCCCCcc-H
Confidence 0000111111233578999999999999985554433 24556677889998873 2
Q ss_pred hhhHHHhhhc
Q 035721 298 EENVELVFGE 307 (308)
Q Consensus 298 ~~~~~~i~~~ 307 (308)
++....|+++
T Consensus 176 ~~~l~~i~~f 185 (187)
T PF05728_consen 176 EEYLPQIIAF 185 (187)
T ss_pred HHHHHHHHHh
Confidence 3345566554
No 110
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.58 E-value=3.4e-14 Score=121.63 Aligned_cols=119 Identities=24% Similarity=0.179 Sum_probs=89.4
Q ss_pred eeEEcCCCcEEEEEEecCCC-----CCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCc-----
Q 035721 34 EYITNSRGLRLFTQWWTPLP-----PAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGL----- 103 (308)
Q Consensus 34 ~~~~~~~g~~l~~~~~~~~~-----~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~----- 103 (308)
..+...++.++.|...+... .....|+||++||++++.. .|..+++.|.++||+|+++|+||||.|...
T Consensus 420 ~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~-~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~ 498 (792)
T TIGR03502 420 VLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKE-NALAFAGTLAAAGVATIAIDHPLHGARSFDANASG 498 (792)
T ss_pred eEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHH-HHHHHHHHHHhCCcEEEEeCCCCCCcccccccccc
Confidence 35667778788776654331 1122579999999999987 567899999989999999999999999432
Q ss_pred ----ccc-------------CCCcchHHHHHHHHHHHHH------Hh---c--CCCCCEEEEEechhhHHHHHHHHhc
Q 035721 104 ----VAH-------------IPDLNPVVEDAISFFDSFR------AR---H--APDLPAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 104 ----~~~-------------~~~~~~~~~d~~~~l~~~~------~~---~--~~~~~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
... ...+++.+.|+..+...+. .. . .+..+++++||||||.++..++...
T Consensus 499 ~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 499 VNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred ccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 110 0256788899999988887 21 0 0567999999999999999998753
No 111
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.57 E-value=1.4e-13 Score=103.26 Aligned_cols=100 Identities=21% Similarity=0.222 Sum_probs=72.6
Q ss_pred EEEEccCCCcc---chHHHHHHHHHHH-cCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHh---cC-CCC
Q 035721 61 LCVVHGFTGES---SWIVQLTAVLFAK-SGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRAR---HA-PDL 132 (308)
Q Consensus 61 vv~~hG~~~~~---~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~---~~-~~~ 132 (308)
||++||.+... ... ..++..+++ .|+.|+.+|+|=.. . ..+.+..+|+.++++++... .+ +.+
T Consensus 1 v~~~HGGg~~~g~~~~~-~~~~~~la~~~g~~v~~~~Yrl~p------~--~~~p~~~~D~~~a~~~l~~~~~~~~~d~~ 71 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESH-WPFAARLAAERGFVVVSIDYRLAP------E--APFPAALEDVKAAYRWLLKNADKLGIDPE 71 (211)
T ss_dssp EEEE--STTTSCGTTTH-HHHHHHHHHHHTSEEEEEE---TT------T--SSTTHHHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CEEECCcccccCChHHH-HHHHHHHHhhccEEEEEeeccccc------c--ccccccccccccceeeecccccccccccc
Confidence 78999987543 223 355666664 79999999999321 1 36788899999999998776 12 678
Q ss_pred CEEEEEechhhHHHHHHHHhcCC----CccEEEEeCCcCCC
Q 035721 133 PAFLYSESLGGAIALYITLRQKG----AWDGLILNGAMCGI 169 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~ 169 (308)
+++++|+|.||.+++.++....+ .++++++++|....
T Consensus 72 ~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 72 RIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred ceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999999999999875443 38999999996554
No 112
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.57 E-value=5.9e-13 Score=97.95 Aligned_cols=124 Identities=14% Similarity=0.111 Sum_probs=83.8
Q ss_pred EEEEEecCCCCC-CCcceEEEEccCCCccchHHH-HHHHHHHH-cCCeEEEecCCCCcCCCCcc----ccCCCcchHHHH
Q 035721 44 LFTQWWTPLPPA-KTLGVLCVVHGFTGESSWIVQ-LTAVLFAK-SGFATCAIDHQGHGFSDGLV----AHIPDLNPVVED 116 (308)
Q Consensus 44 l~~~~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~-~~~~~l~~-~g~~v~~~d~~G~G~s~~~~----~~~~~~~~~~~d 116 (308)
|.|++|.|+... .+.|.||++||.+++...+.. .-...|++ +||.|+.++.........-. .....-...+..
T Consensus 1 l~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~ 80 (220)
T PF10503_consen 1 LSYRLYVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAF 80 (220)
T ss_pred CcEEEecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhh
Confidence 468888887542 257999999999988763322 11233444 58999998854221111100 000011122456
Q ss_pred HHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 117 AISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 117 ~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
|.++++++..++. +..+|.+.|+|.||+++..++..+|+.+.++...++..
T Consensus 81 i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 81 IAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred HHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 7777777777666 88999999999999999999999999999988877653
No 113
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.56 E-value=6.3e-14 Score=122.12 Aligned_cols=219 Identities=14% Similarity=0.087 Sum_probs=123.4
Q ss_pred HHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHh---------------cCCCCCEEEEEech
Q 035721 77 LTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRAR---------------HAPDLPAFLYSESL 141 (308)
Q Consensus 77 ~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~---------------~~~~~~~~l~G~S~ 141 (308)
.+.+.|..+||.|+..|.||.|.|++.... ...+..+|..++|+++..+ .+...+|.++|.|+
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~--~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTT--GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCcc--CCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 456789999999999999999999986432 2245578999999999842 11356999999999
Q ss_pred hhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchh-------hhhHHHhhhhCCCcccccCCCCCCCcccccHHHHH
Q 035721 142 GGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPL-------EHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRK 214 (308)
Q Consensus 142 Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (308)
||.+++.+|...|+.++++|..++.............. ......+.......... ............
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~------~~~~~~~~~~~~ 421 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLL------AGDYLRHNEACE 421 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccC------cchhhcchHHHH
Confidence 99999999999888999999887765432111000000 00000000000000000 000000000000
Q ss_pred HHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcC--CCCcEEEecCCccc
Q 035721 215 LALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAAS--KDKTLSIYPGMWHQ 292 (308)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~ 292 (308)
.............. .....+... .++...+.++++|+|+++|..|..++++.+.++++.+.. .+.++.+. .++|.
T Consensus 422 ~~~~~~~~~~~~~~-~~y~~fW~~-rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~-~g~H~ 498 (767)
T PRK05371 422 KLLAELTAAQDRKT-GDYNDFWDD-RNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH-QGGHV 498 (767)
T ss_pred HHHhhhhhhhhhcC-CCccHHHHh-CCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe-CCCcc
Confidence 00000000000000 000001111 233455678999999999999999999888888888752 24566544 47896
Q ss_pred cc--CCchhhHHHhhh
Q 035721 293 LI--GEPEENVELVFG 306 (308)
Q Consensus 293 ~~--~~~~~~~~~i~~ 306 (308)
.. ..+.++.+.+.+
T Consensus 499 ~~~~~~~~d~~e~~~~ 514 (767)
T PRK05371 499 YPNNWQSIDFRDTMNA 514 (767)
T ss_pred CCCchhHHHHHHHHHH
Confidence 55 333444444443
No 114
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.55 E-value=8e-14 Score=106.00 Aligned_cols=102 Identities=16% Similarity=0.110 Sum_probs=77.8
Q ss_pred ceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEE
Q 035721 59 GVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYS 138 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G 138 (308)
++|+|+|+.+++.. .+..+++.|....+.|+.++.+|.+..... . .++++++++..+.|...... .++.|+|
T Consensus 1 ~~lf~~p~~gG~~~-~y~~la~~l~~~~~~v~~i~~~~~~~~~~~-~--~si~~la~~y~~~I~~~~~~----gp~~L~G 72 (229)
T PF00975_consen 1 RPLFCFPPAGGSAS-SYRPLARALPDDVIGVYGIEYPGRGDDEPP-P--DSIEELASRYAEAIRARQPE----GPYVLAG 72 (229)
T ss_dssp -EEEEESSTTCSGG-GGHHHHHHHTTTEEEEEEECSTTSCTTSHE-E--SSHHHHHHHHHHHHHHHTSS----SSEEEEE
T ss_pred CeEEEEcCCccCHH-HHHHHHHhCCCCeEEEEEEecCCCCCCCCC-C--CCHHHHHHHHHHHhhhhCCC----CCeeehc
Confidence 36999999999877 558999999764589999999999832222 2 37888887777766555432 3999999
Q ss_pred echhhHHHHHHHHhc---CCCccEEEEeCCcCC
Q 035721 139 ESLGGAIALYITLRQ---KGAWDGLILNGAMCG 168 (308)
Q Consensus 139 ~S~Gg~~a~~~a~~~---p~~v~~~vl~~~~~~ 168 (308)
||+||.+|..+|.+- ...+..++++++...
T Consensus 73 ~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 73 WSFGGILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp ETHHHHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred cCccHHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 999999999999764 345899999997543
No 115
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.55 E-value=8.7e-14 Score=97.73 Aligned_cols=181 Identities=13% Similarity=0.099 Sum_probs=123.6
Q ss_pred ceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEE
Q 035721 59 GVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYS 138 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G 138 (308)
..+||+.|=++-.. .-+.+++.|+++|+.|+.+|-+-+=.+.+ +.++.+.|+..++++...+. +..+++|+|
T Consensus 3 t~~v~~SGDgGw~~-~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r------tP~~~a~Dl~~~i~~y~~~w-~~~~vvLiG 74 (192)
T PF06057_consen 3 TLAVFFSGDGGWRD-LDKQIAEALAKQGVPVVGVDSLRYFWSER------TPEQTAADLARIIRHYRARW-GRKRVVLIG 74 (192)
T ss_pred EEEEEEeCCCCchh-hhHHHHHHHHHCCCeEEEechHHHHhhhC------CHHHHHHHHHHHHHHHHHHh-CCceEEEEe
Confidence 46788888777665 44789999999999999999765544432 66778999999999888775 777999999
Q ss_pred echhhHHHHHHHHhcC----CCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHH
Q 035721 139 ESLGGAIALYITLRQK----GAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRK 214 (308)
Q Consensus 139 ~S~Gg~~a~~~a~~~p----~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (308)
+|+|+-+.-....+.| ++|+.++|+++.....-.... .. +....-.+.
T Consensus 75 YSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv-------~~-----------------wlg~~~~~~---- 126 (192)
T PF06057_consen 75 YSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIHV-------SG-----------------WLGMGGDDA---- 126 (192)
T ss_pred ecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEEh-------hh-----------------hcCCCCCcc----
Confidence 9999988877777766 579999999986443211100 00 000000000
Q ss_pred HHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCC-CcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCcccc
Q 035721 215 LALSSPRRPVARPRAATALELLRVSRDLQGRFEEV-EVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQL 293 (308)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 293 (308)
. .+..+.+.++ ..|+++|+|+++.-..+.. +..++++.+.+| +||.+
T Consensus 127 -------~-----------------~~~~pei~~l~~~~v~CiyG~~E~d~~cp~-------l~~~~~~~i~lp-GgHHf 174 (192)
T PF06057_consen 127 -------A-----------------YPVIPEIAKLPPAPVQCIYGEDEDDSLCPS-------LRQPGVEVIALP-GGHHF 174 (192)
T ss_pred -------c-----------------CCchHHHHhCCCCeEEEEEcCCCCCCcCcc-------ccCCCcEEEEcC-CCcCC
Confidence 0 0112333444 3599999999886543322 233678999999 77888
Q ss_pred cCCchhhHHHhhhc
Q 035721 294 IGEPEENVELVFGE 307 (308)
Q Consensus 294 ~~~~~~~~~~i~~~ 307 (308)
-++-+.+++.|++.
T Consensus 175 d~dy~~La~~Il~~ 188 (192)
T PF06057_consen 175 DGDYDALAKRILDA 188 (192)
T ss_pred CCCHHHHHHHHHHH
Confidence 86677778777754
No 116
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.51 E-value=1.1e-11 Score=98.54 Aligned_cols=212 Identities=21% Similarity=0.175 Sum_probs=126.9
Q ss_pred CCCcEEEEEEecC-CCCCCCcceEEEEccCCCccc---hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH
Q 035721 39 SRGLRLFTQWWTP-LPPAKTLGVLCVVHGFTGESS---WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 39 ~~g~~l~~~~~~~-~~~~~~~~~vv~~hG~~~~~~---~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 114 (308)
.++..+.++++.| .....+.|+||++||.+.... .....+...+...|+.|+++|+|-.- . ..+....
T Consensus 59 ~~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaP------e--~~~p~~~ 130 (312)
T COG0657 59 PSGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAP------E--HPFPAAL 130 (312)
T ss_pred CCCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCC------C--CCCCchH
Confidence 3444577888887 222245899999999875432 22234555566679999999998322 2 2566667
Q ss_pred HHHHHHHHHHHHhc---C-CCCCEEEEEechhhHHHHHHHHhcCC----CccEEEEeCCcCCCCcCCCCCchhhhhHHHh
Q 035721 115 EDAISFFDSFRARH---A-PDLPAFLYSESLGGAIALYITLRQKG----AWDGLILNGAMCGISQKFKPPWPLEHLLFTV 186 (308)
Q Consensus 115 ~d~~~~l~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
+|+.+.++++..+. + +++++.+.|+|.||.+++.++..-.+ ...+.+++.|...... .......
T Consensus 131 ~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~~~------- 202 (312)
T COG0657 131 EDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASLPG------- 202 (312)
T ss_pred HHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccchhh-------
Confidence 77777777776542 2 67899999999999999988876553 4788999999876553 1100000
Q ss_pred hhhCCCcccccCCCCCCCcccccHH----HHHHHhhCCCCCCCcchHHHHHHHHHHHHHh-hhhcCCCCcceEEEeeCCC
Q 035721 187 AWLVPTWRVVPTRGSLPMVSFKEEW----KRKLALSSPRRPVARPRAATALELLRVSRDL-QGRFEEVEVPMLICHGGDD 261 (308)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~P~l~i~g~~D 261 (308)
......+.... ....+......... +.. ..+ .+.+.. -.|+++++|+.|
T Consensus 203 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~----------spl~~~~~~~-lPP~~i~~a~~D 256 (312)
T COG0657 203 --------------YGEADLLDAAAILAWFADLYLGAAPDRED-PEA----------SPLASDDLSG-LPPTLIQTAEFD 256 (312)
T ss_pred --------------cCCccccCHHHHHHHHHHHhCcCccccCC-Ccc----------CccccccccC-CCCEEEEecCCC
Confidence 00000000000 00011100000000 000 000 011333 458999999999
Q ss_pred cccChHHHHHHHHHhcC--CCCcEEEecCCccccc
Q 035721 262 VVCDPACVEELYKRAAS--KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 262 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 294 (308)
.+.+ ....+.+.+.. ..++++.+++..|.+.
T Consensus 257 ~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H~f~ 289 (312)
T COG0657 257 PLRD--EGEAYAERLRAAGVPVELRVYPGMIHGFD 289 (312)
T ss_pred cchh--HHHHHHHHHHHcCCeEEEEEeCCcceecc
Confidence 9987 56666666642 3468899999999875
No 117
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.49 E-value=1e-12 Score=100.46 Aligned_cols=124 Identities=19% Similarity=0.168 Sum_probs=94.6
Q ss_pred EEcCCCcEEEEEEecCCCCC--CCcceEEEEccCCCccchHHHHHHHHHHHc---------CCeEEEecCCCCcCCCCcc
Q 035721 36 ITNSRGLRLFTQWWTPLPPA--KTLGVLCVVHGFTGESSWIVQLTAVLFAKS---------GFATCAIDHQGHGFSDGLV 104 (308)
Q Consensus 36 ~~~~~g~~l~~~~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~---------g~~v~~~d~~G~G~s~~~~ 104 (308)
-+...|.+|++....+.... ..-.+++++||++|+...++ .+++.|.+. -|.|+++.+||+|.|+++.
T Consensus 128 kTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFy-kfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~s 206 (469)
T KOG2565|consen 128 KTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFY-KFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPS 206 (469)
T ss_pred hhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHH-hhhhhhcCccccCCccceeEEEeccCCCCcccCcCCc
Confidence 34557999999888766431 22347999999999877554 678888654 2689999999999999977
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCC
Q 035721 105 AHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGA 165 (308)
Q Consensus 105 ~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 165 (308)
....+..+.+.-+..++-.++.+ ++.|-|-.||+.|+..+|..+|++|.|+-+..+
T Consensus 207 k~GFn~~a~ArvmrkLMlRLg~n-----kffiqGgDwGSiI~snlasLyPenV~GlHlnm~ 262 (469)
T KOG2565|consen 207 KTGFNAAATARVMRKLMLRLGYN-----KFFIQGGDWGSIIGSNLASLYPENVLGLHLNMC 262 (469)
T ss_pred cCCccHHHHHHHHHHHHHHhCcc-----eeEeecCchHHHHHHHHHhhcchhhhHhhhccc
Confidence 65445555555555565555554 999999999999999999999999988765443
No 118
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.49 E-value=1.3e-11 Score=96.54 Aligned_cols=133 Identities=17% Similarity=0.038 Sum_probs=87.5
Q ss_pred eEEcCCCcEEEEEEecCCCCC--CCcceEEEEccCCCccc----hHHHHHHHHHHH-cCCeEEEecCCCCcCCCCccccC
Q 035721 35 YITNSRGLRLFTQWWTPLPPA--KTLGVLCVVHGFTGESS----WIVQLTAVLFAK-SGFATCAIDHQGHGFSDGLVAHI 107 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~--~~~~~vv~~hG~~~~~~----~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~ 107 (308)
.+.......+..++|.|.... ...|.||++||.|.... ..+..+...++. .+..|+++|+|=--+..-+
T Consensus 65 dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~P---- 140 (336)
T KOG1515|consen 65 DVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFP---- 140 (336)
T ss_pred eeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCC----
Confidence 334444557888888887653 36799999999874322 244667777754 4889999999832222111
Q ss_pred CCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhc------CCCccEEEEeCCcCCCCc
Q 035721 108 PDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQ------KGAWDGLILNGAMCGISQ 171 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~~~~~ 171 (308)
..+++..+.+.-+.+..-...+ +..+++|.|-|.||.+|..++.+. +.++++.|++-|......
T Consensus 141 a~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 141 AAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred ccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCC
Confidence 2344444444444442111122 788999999999999999888753 357999999999877543
No 119
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.46 E-value=9.1e-12 Score=97.44 Aligned_cols=236 Identities=14% Similarity=0.050 Sum_probs=137.3
Q ss_pred cCCCCCCCcceEEEEccCCCccch----HHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHH-HHHHHHHHHH
Q 035721 50 TPLPPAKTLGVLCVVHGFTGESSW----IVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVV-EDAISFFDSF 124 (308)
Q Consensus 50 ~~~~~~~~~~~vv~~hG~~~~~~~----~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~-~d~~~~l~~~ 124 (308)
.|...+.-+++++++|.+-..... .-..++..|.++|..|+.+++++-..+... .++++++ +.+...++.+
T Consensus 99 ~p~~e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~----~~~edYi~e~l~~aid~v 174 (445)
T COG3243 99 KPLTEKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAA----KNLEDYILEGLSEAIDTV 174 (445)
T ss_pred CCCCCccCCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhh----ccHHHHHHHHHHHHHHHH
Confidence 344433346789999997543321 124788999999999999999976665542 3677777 7777777777
Q ss_pred HHhcCCCCCEEEEEechhhHHHHHHHHhcCCC-ccEEEEeCCcCCCCcCCCCCchhhh-hHHHhh------hhCCCcccc
Q 035721 125 RARHAPDLPAFLYSESLGGAIALYITLRQKGA-WDGLILNGAMCGISQKFKPPWPLEH-LLFTVA------WLVPTWRVV 196 (308)
Q Consensus 125 ~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~-v~~~vl~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~ 196 (308)
.... +..+|.++|+|.||.+...+++.++.+ |++++++.+...+............ ....+. ..++.+...
T Consensus 175 ~~it-g~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma 253 (445)
T COG3243 175 KDIT-GQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMA 253 (445)
T ss_pred HHHh-CccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHH
Confidence 6653 446999999999999999988888876 9999999887776543321111111 111110 111111110
Q ss_pred cCCCCCCC--cccccHHHHHHHhh--CCC-----C---CCCcchHHHHHHHHHHH---HHh----------hhhcCCCCc
Q 035721 197 PTRGSLPM--VSFKEEWKRKLALS--SPR-----R---PVARPRAATALELLRVS---RDL----------QGRFEEVEV 251 (308)
Q Consensus 197 ~~~~~~~~--~~~~~~~~~~~~~~--~~~-----~---~~~~~~~~~~~~~~~~~---~~~----------~~~~~~i~~ 251 (308)
... .+.+ ..... .....+.. .+. . .....+......+++.. ..+ .-.+.+|+|
T Consensus 254 ~~F-~mLrpndliw~-~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~ 331 (445)
T COG3243 254 IVF-FLLRPNDLIWN-YFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITC 331 (445)
T ss_pred HHH-HhcCccccchH-HHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhccc
Confidence 000 0000 00000 00000000 000 0 00111122222222111 111 123678999
Q ss_pred ceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 252 PMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 252 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
|++++.|++|.++|.+.+....+.+++ +++++..+ +||.-.
T Consensus 332 pvy~~a~~~DhI~P~~Sv~~g~~l~~g-~~~f~l~~-sGHIa~ 372 (445)
T COG3243 332 PVYNLAAEEDHIAPWSSVYLGARLLGG-EVTFVLSR-SGHIAG 372 (445)
T ss_pred ceEEEeecccccCCHHHHHHHHHhcCC-ceEEEEec-CceEEE
Confidence 999999999999999999999988864 46666555 999877
No 120
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.44 E-value=3.7e-12 Score=87.49 Aligned_cols=156 Identities=15% Similarity=0.062 Sum_probs=103.4
Q ss_pred ceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEE
Q 035721 59 GVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYS 138 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G 138 (308)
+.+|++||+.++....|+...+. +. -.+-.+++. ... ....++|++.+.+.+... .+ +++||+
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~--~l-~~a~rveq~-------~w~-~P~~~dWi~~l~~~v~a~-~~-----~~vlVA 65 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWES--AL-PNARRVEQD-------DWE-APVLDDWIARLEKEVNAA-EG-----PVVLVA 65 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHh--hC-ccchhcccC-------CCC-CCCHHHHHHHHHHHHhcc-CC-----CeEEEE
Confidence 45899999998876455433221 11 112222221 011 126677777777776665 22 799999
Q ss_pred echhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhh
Q 035721 139 ESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALS 218 (308)
Q Consensus 139 ~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (308)
||+|+..+++++.+....|.|+++++|+..-........ ...
T Consensus 66 HSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~--------------------------~~t------------ 107 (181)
T COG3545 66 HSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKH--------------------------LMT------------ 107 (181)
T ss_pred ecccHHHHHHHHHhhhhccceEEEecCCCccccccchhh--------------------------ccc------------
Confidence 999999999999988779999999999643221000000 000
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 219 SPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
.+. .....+.-|.+++.+.+|++++++.++.+++.+ ++.++...++||..-
T Consensus 108 ---------------------f~~-~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~w---gs~lv~~g~~GHiN~ 158 (181)
T COG3545 108 ---------------------FDP-IPREPLPFPSVVVASRNDPYVSYEHAEDLANAW---GSALVDVGEGGHINA 158 (181)
T ss_pred ---------------------cCC-CccccCCCceeEEEecCCCCCCHHHHHHHHHhc---cHhheecccccccch
Confidence 000 111234568999999999999999999999998 578999999999765
No 121
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.43 E-value=5.3e-13 Score=103.10 Aligned_cols=232 Identities=18% Similarity=0.135 Sum_probs=132.4
Q ss_pred CcEEEEEEecCCCCCC-----CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCC--cCCCCcccc-----CC
Q 035721 41 GLRLFTQWWTPLPPAK-----TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGH--GFSDGLVAH-----IP 108 (308)
Q Consensus 41 g~~l~~~~~~~~~~~~-----~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~--G~s~~~~~~-----~~ 108 (308)
+.++....+.+..... ..|+|++-||.++... -+..+++.|++.||.|.+++++|. |........ ..
T Consensus 49 ~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~-~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~ 127 (365)
T COG4188 49 DRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVT-GFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPA 127 (365)
T ss_pred CCccccceeccCCCccccccCcCCeEEecCCCCCCcc-chhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchh
Confidence 4566666666655433 5799999999998876 457899999999999999999984 333221111 01
Q ss_pred CcchHHHHHHHHHHHHHHh---c--C---CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhh
Q 035721 109 DLNPVVEDAISFFDSFRAR---H--A---PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLE 180 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~---~--~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~ 180 (308)
.+.+...|+..+|+.+... . . +..+|.++|||+||+.++.++....+-.....-|....... ........
T Consensus 128 ~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~--~~~~~~~~ 205 (365)
T COG4188 128 EWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRIC--LDPPGLNG 205 (365)
T ss_pred hhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcc--cCCCCcCh
Confidence 2335567888888887665 2 1 67899999999999999988876543111111111000000 00000000
Q ss_pred hhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCC
Q 035721 181 HLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGD 260 (308)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~ 260 (308)
. .+..-...+. ......++++..+......+..... .. ...+.++++|++++.|..
T Consensus 206 ~---~l~q~~av~~------~~~~~~~rDpriravvA~~p~~~~~--------------Fg-~tgl~~v~~P~~~~a~s~ 261 (365)
T COG4188 206 R---LLNQCAAVWL------PRQAYDLRDPRIRAVVAINPALGMI--------------FG-TTGLVKVTDPVLLAAGSA 261 (365)
T ss_pred h---hhcccccccc------chhhhccccccceeeeeccCCcccc--------------cc-cccceeeecceeeecccc
Confidence 0 0000000000 0011111222211111111111000 00 245778999999999999
Q ss_pred CcccChH-HHHHHHHHhcCCCCcEEEecCCccccc-CCchh
Q 035721 261 DVVCDPA-CVEELYKRAASKDKTLSIYPGMWHQLI-GEPEE 299 (308)
Q Consensus 261 D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~ 299 (308)
|.+.|+. .....+..+++....+..++++.|+-+ +..++
T Consensus 262 D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~ 302 (365)
T COG4188 262 DGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKE 302 (365)
T ss_pred cccCCcccccccccccCCcchhheeecCCCccccccccCcc
Confidence 9987764 455556667555558899999999998 65554
No 122
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.41 E-value=7e-12 Score=109.21 Aligned_cols=209 Identities=18% Similarity=0.149 Sum_probs=131.7
Q ss_pred CCcEEEEEEecCCCC--CCCcceEEEEccCCCccc---hHHHHHHH-HHHHcCCeEEEecCCCCcCCCCccccC--CCc-
Q 035721 40 RGLRLFTQWWTPLPP--AKTLGVLCVVHGFTGESS---WIVQLTAV-LFAKSGFATCAIDHQGHGFSDGLVAHI--PDL- 110 (308)
Q Consensus 40 ~g~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~---~~~~~~~~-~l~~~g~~v~~~d~~G~G~s~~~~~~~--~~~- 110 (308)
+|....+....|++- .++-|.+|.+||.+++.. .+-..+.. .....|+.|+.+|.||.|......... ..+
T Consensus 506 ~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG 585 (755)
T KOG2100|consen 506 DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLG 585 (755)
T ss_pred ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcC
Confidence 898999998888653 234578888999886322 01112333 355679999999999988765421100 001
Q ss_pred chHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcC-CCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhh
Q 035721 111 NPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQK-GAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAW 188 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p-~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (308)
...++|...+++.+....- |..++.|+|+|+||.+++.++...+ +-+++.+.++|...+. .... ....+.
T Consensus 586 ~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds-~~tery------ 657 (755)
T KOG2100|consen 586 DVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDS-TYTERY------ 657 (755)
T ss_pred CcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eecc-cccHhh------
Confidence 1124555555555444333 7779999999999999999999998 4566669999976643 1100 000000
Q ss_pred hCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcce-EEEeeCCCcccChH
Q 035721 189 LVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPM-LICHGGDDVVCDPA 267 (308)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~-l~i~g~~D~~~~~~ 267 (308)
+ ........ .+.+ ......+..++.|. |++||+.|..++.+
T Consensus 658 -m----------g~p~~~~~------~y~e---------------------~~~~~~~~~~~~~~~LliHGt~DdnVh~q 699 (755)
T KOG2100|consen 658 -M----------GLPSENDK------GYEE---------------------SSVSSPANNIKTPKLLLIHGTEDDNVHFQ 699 (755)
T ss_pred -c----------CCCccccc------hhhh---------------------ccccchhhhhccCCEEEEEcCCcCCcCHH
Confidence 0 00000000 0000 11223345555565 99999999999999
Q ss_pred HHHHHHHHhcCC--CCcEEEecCCccccc
Q 035721 268 CVEELYKRAASK--DKTLSIYPGMWHQLI 294 (308)
Q Consensus 268 ~~~~~~~~~~~~--~~~~~~~~~~gH~~~ 294 (308)
++..+.+++... ..++.++|+.+|.+.
T Consensus 700 ~s~~~~~aL~~~gv~~~~~vypde~H~is 728 (755)
T KOG2100|consen 700 QSAILIKALQNAGVPFRLLVYPDENHGIS 728 (755)
T ss_pred HHHHHHHHHHHCCCceEEEEeCCCCcccc
Confidence 999999888643 378899999999988
No 123
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.40 E-value=5.5e-12 Score=93.95 Aligned_cols=167 Identities=14% Similarity=0.081 Sum_probs=82.9
Q ss_pred CcceEEEEccCCCccchHH---HHHHHHHHHcCCeEEEecCCC-----CcCCCC---------ccccCC----------C
Q 035721 57 TLGVLCVVHGFTGESSWIV---QLTAVLFAKSGFATCAIDHQG-----HGFSDG---------LVAHIP----------D 109 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~---~~~~~~l~~~g~~v~~~d~~G-----~G~s~~---------~~~~~~----------~ 109 (308)
+++-||++||++.+...+- ..+.+.|.+.++..+.+|-|- -|-... .....+ .
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 3778999999999987442 245566655369998888542 111110 000000 1
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc--------CCCccEEEEeCCcCCCCcCCCCCchhhh
Q 035721 110 LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ--------KGAWDGLILNGAMCGISQKFKPPWPLEH 181 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~--------p~~v~~~vl~~~~~~~~~~~~~~~~~~~ 181 (308)
...+.+.+..+.+.+.... .=..|+|+|.||.+|..++... ...++.+|++++........
T Consensus 83 ~~~~~~sl~~l~~~i~~~G---PfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~-------- 151 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENG---PFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDY-------- 151 (212)
T ss_dssp G---HHHHHHHHHHHHHH------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-G--------
T ss_pred ccCHHHHHHHHHHHHHhcC---CeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhh--------
Confidence 1222333333344444432 1356999999999999887532 12478899988854322100
Q ss_pred hHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCC
Q 035721 182 LLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDD 261 (308)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 261 (308)
.... .-..+++|+|-|+|++|
T Consensus 152 ----------------------------------------------------------~~~~-~~~~i~iPtlHv~G~~D 172 (212)
T PF03959_consen 152 ----------------------------------------------------------QELY-DEPKISIPTLHVIGEND 172 (212)
T ss_dssp ----------------------------------------------------------TTTT---TT---EEEEEEETT-
T ss_pred ----------------------------------------------------------hhhh-ccccCCCCeEEEEeCCC
Confidence 0000 12467899999999999
Q ss_pred cccChHHHHHHHHHhcCCCCcEEEecCCcccccC
Q 035721 262 VVCDPACVEELYKRAASKDKTLSIYPGMWHQLIG 295 (308)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 295 (308)
.+++++.++.+.+.+... .+++..+ +||.+..
T Consensus 173 ~~~~~~~s~~L~~~~~~~-~~v~~h~-gGH~vP~ 204 (212)
T PF03959_consen 173 PVVPPERSEALAEMFDPD-ARVIEHD-GGHHVPR 204 (212)
T ss_dssp SSS-HHHHHHHHHHHHHH-EEEEEES-SSSS---
T ss_pred CCcchHHHHHHHHhccCC-cEEEEEC-CCCcCcC
Confidence 999999999999998422 5555555 8898883
No 124
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.40 E-value=4.4e-12 Score=104.05 Aligned_cols=137 Identities=17% Similarity=0.150 Sum_probs=107.3
Q ss_pred ccccceeEEcCCCcEEEEEEecCCCCCCCcceEEEEc--cCCCccchH--HHHHHH---HHHHcCCeEEEecCCCCcCCC
Q 035721 29 VSHSSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVH--GFTGESSWI--VQLTAV---LFAKSGFATCAIDHQGHGFSD 101 (308)
Q Consensus 29 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~h--G~~~~~~~~--~~~~~~---~l~~~g~~v~~~d~~G~G~s~ 101 (308)
+......+++.||++|+..+|.|.+. .+.|+++..+ .+.-....+ .....+ .++.+||.|+..|.||.|.|.
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~~-g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~Se 95 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAGA-GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSE 95 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCCC-CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCC
Confidence 44456789999999999999999876 6789999988 332221001 122334 588899999999999999999
Q ss_pred CccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 102 GLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 102 ~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
+......+ .-++|-.+.|+++..+.+...+|..+|.|++|...+.+|...|..+++++-..+...
T Consensus 96 G~~~~~~~--~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 96 GVFDPESS--REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred cccceecc--ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 97665444 346777788888887666778999999999999999999999988999997777655
No 125
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.40 E-value=2.1e-11 Score=100.93 Aligned_cols=136 Identities=24% Similarity=0.223 Sum_probs=93.1
Q ss_pred ccceeEEcCC---CcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHH-----------H-------HHHcCCeE
Q 035721 31 HSSEYITNSR---GLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAV-----------L-------FAKSGFAT 89 (308)
Q Consensus 31 ~~~~~~~~~~---g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~-----------~-------l~~~g~~v 89 (308)
....++...+ +..++|..+.........|+||+++|.+|.+. .+..+.+ . +.+ -..+
T Consensus 47 ~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss-~~G~f~E~GP~~i~~~~~~~~~n~~sW~~-~~~~ 124 (462)
T PTZ00472 47 QWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSS-MFALLAENGPCLMNETTGDIYNNTYSWNN-EAYV 124 (462)
T ss_pred ceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHH-HHhhhccCCCeEEeCCCCceeECCccccc-ccCe
Confidence 3445555432 57899988886655567899999999988776 3222110 1 222 2678
Q ss_pred EEecCC-CCcCCCCccc-cCCCcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHhc----------CC
Q 035721 90 CAIDHQ-GHGFSDGLVA-HIPDLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLRQ----------KG 155 (308)
Q Consensus 90 ~~~d~~-G~G~s~~~~~-~~~~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~----------p~ 155 (308)
+.+|.| |+|.|..... ...+.++.++|+..+++.+-.+.. ...+++|+|+|+||..+..+|.+. +-
T Consensus 125 l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~i 204 (462)
T PTZ00472 125 IYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYI 204 (462)
T ss_pred EEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCcee
Confidence 999975 8888876432 223557789999999987754432 457999999999999887777652 12
Q ss_pred CccEEEEeCCcCC
Q 035721 156 AWDGLILNGAMCG 168 (308)
Q Consensus 156 ~v~~~vl~~~~~~ 168 (308)
.++++++-++...
T Consensus 205 nLkGi~IGNg~~d 217 (462)
T PTZ00472 205 NLAGLAVGNGLTD 217 (462)
T ss_pred eeEEEEEeccccC
Confidence 4789988887654
No 126
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.39 E-value=1.4e-11 Score=91.59 Aligned_cols=126 Identities=14% Similarity=0.063 Sum_probs=77.7
Q ss_pred EEcCCCcEEEEEEecCCCCC--CCc-ceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCc---CCCC-cc---c
Q 035721 36 ITNSRGLRLFTQWWTPLPPA--KTL-GVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHG---FSDG-LV---A 105 (308)
Q Consensus 36 ~~~~~g~~l~~~~~~~~~~~--~~~-~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G---~s~~-~~---~ 105 (308)
.....|.+|.|+.|.|++-+ +.. |.|||+||.+..+..- ....+. |.--++.+.+-.+ .++. .. .
T Consensus 166 ~d~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn---~~~l~s--g~gaiawa~pedqcfVlAPQy~~if~d 240 (387)
T COG4099 166 YDESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDN---DKVLSS--GIGAIAWAGPEDQCFVLAPQYNPIFAD 240 (387)
T ss_pred eccccCceeeEEEecccccCCCCccccEEEEEecCCCCCchh---hhhhhc--CccceeeecccCceEEEcccccccccc
Confidence 34457889999999996532 223 8999999998766522 111221 2223333333222 0100 00 0
Q ss_pred cCCCcchHHHHHHHHHH-HHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCc
Q 035721 106 HIPDLNPVVEDAISFFD-SFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAM 166 (308)
Q Consensus 106 ~~~~~~~~~~d~~~~l~-~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 166 (308)
..............+++ .+...+. +..+|.++|.|+||.-++.++.++|+.+.+.+++++.
T Consensus 241 ~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 241 SEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred cccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 00011222333334443 5555555 8889999999999999999999999999999999874
No 127
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.39 E-value=4.6e-12 Score=88.85 Aligned_cols=191 Identities=10% Similarity=0.056 Sum_probs=123.0
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCC---ccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHH
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTG---ESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAIS 119 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~---~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 119 (308)
.-...+|++... .+..||+||.-. +.... -..+..+.++||+|..+++ +.+.. . .++++.+.++..
T Consensus 55 ~q~VDIwg~~~~---~klfIfIHGGYW~~g~rk~c-lsiv~~a~~~gY~vasvgY---~l~~q--~--htL~qt~~~~~~ 123 (270)
T KOG4627|consen 55 RQLVDIWGSTNQ---AKLFIFIHGGYWQEGDRKMC-LSIVGPAVRRGYRVASVGY---NLCPQ--V--HTLEQTMTQFTH 123 (270)
T ss_pred ceEEEEecCCCC---ccEEEEEecchhhcCchhcc-cchhhhhhhcCeEEEEecc---CcCcc--c--ccHHHHHHHHHH
Confidence 556778888654 889999999632 22112 2455666678999999875 33322 1 266777777777
Q ss_pred HHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh-cCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccC
Q 035721 120 FFDSFRARHAPDLPAFLYSESLGGAIALYITLR-QKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPT 198 (308)
Q Consensus 120 ~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (308)
.++++.+.......+.+-|||.|+.+|..+..+ +..+|.+++++++...+.+.......
T Consensus 124 gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g-------------------- 183 (270)
T KOG4627|consen 124 GVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESG-------------------- 183 (270)
T ss_pred HHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccc--------------------
Confidence 777776654344467788999999999877655 44589999998886543311100000
Q ss_pred CCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcC
Q 035721 199 RGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAAS 278 (308)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 278 (308)
........+ . .........+..+++|++++.|++|.---.+..+.+...+
T Consensus 184 --~dlgLt~~~--a------------------------e~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~-- 233 (270)
T KOG4627|consen 184 --NDLGLTERN--A------------------------ESVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQL-- 233 (270)
T ss_pred --cccCcccch--h------------------------hhcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHh--
Confidence 000000000 0 0001112345678999999999999765578888888888
Q ss_pred CCCcEEEecCCccccc
Q 035721 279 KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 279 ~~~~~~~~~~~gH~~~ 294 (308)
..+++..+++.+|+-.
T Consensus 234 ~~a~~~~f~n~~hy~I 249 (270)
T KOG4627|consen 234 RKASFTLFKNYDHYDI 249 (270)
T ss_pred hhcceeecCCcchhhH
Confidence 4689999999999865
No 128
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.39 E-value=5.5e-11 Score=97.30 Aligned_cols=216 Identities=15% Similarity=0.107 Sum_probs=135.5
Q ss_pred cceeEEcCCCcEEEEEEecCCCC--CCCcceEEEEccCCCccc----hHH--HHHHHHHHHcCCeEEEecCCCCcCCCCc
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPP--AKTLGVLCVVHGFTGESS----WIV--QLTAVLFAKSGFATCAIDHQGHGFSDGL 103 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~----~~~--~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 103 (308)
+...+....|..++..++.|.+- .++-|+|+++-|.++-.. +-+ .--...|+..||.|+++|-||.......
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlk 693 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLK 693 (867)
T ss_pred hheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchh
Confidence 44556777889999999998764 245789999999876321 001 0114567888999999999996544321
Q ss_pred cc-------cCCCcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCC
Q 035721 104 VA-------HIPDLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFK 174 (308)
Q Consensus 104 ~~-------~~~~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~ 174 (308)
.. .....++.+ +-++.+..+.+ +..+|.|-|||+||++++....++|+-++..|.-+|......
T Consensus 694 FE~~ik~kmGqVE~eDQV----eglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~--- 766 (867)
T KOG2281|consen 694 FESHIKKKMGQVEVEDQV----EGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRL--- 766 (867)
T ss_pred hHHHHhhccCeeeehhhH----HHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeee---
Confidence 11 011334444 44444444443 777999999999999999999999998888886666433210
Q ss_pred CCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceE
Q 035721 175 PPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPML 254 (308)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 254 (308)
.+....+.+...+......-..... ....+.++.-.-..|
T Consensus 767 ---------------------------------YDTgYTERYMg~P~~nE~gY~agSV-------~~~VeklpdepnRLl 806 (867)
T KOG2281|consen 767 ---------------------------------YDTGYTERYMGYPDNNEHGYGAGSV-------AGHVEKLPDEPNRLL 806 (867)
T ss_pred ---------------------------------ecccchhhhcCCCccchhcccchhH-------HHHHhhCCCCCceEE
Confidence 0000011111111000000000000 112233444455689
Q ss_pred EEeeCCCcccChHHHHHHHHHhc--CCCCcEEEecCCccccc
Q 035721 255 ICHGGDDVVCDPACVEELYKRAA--SKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 255 ~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~ 294 (308)
++||--|.-|...+...+...+. ++.-++.++|+--|.+-
T Consensus 807 LvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR 848 (867)
T KOG2281|consen 807 LVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIR 848 (867)
T ss_pred EEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccC
Confidence 99999999999988888877774 24569999999999887
No 129
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.36 E-value=2.8e-11 Score=88.53 Aligned_cols=116 Identities=22% Similarity=0.115 Sum_probs=85.5
Q ss_pred EEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHH
Q 035721 45 FTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSF 124 (308)
Q Consensus 45 ~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~ 124 (308)
...++.|... ..-|+|+|+||+.-... ++..+..+++.+||.|+++++-..-. + +-.+.+++..++++++
T Consensus 34 pLlI~tP~~~-G~yPVilF~HG~~l~ns-~Ys~lL~HIASHGfIVVAPQl~~~~~---p-----~~~~Ei~~aa~V~~WL 103 (307)
T PF07224_consen 34 PLLIVTPSEA-GTYPVILFLHGFNLYNS-FYSQLLAHIASHGFIVVAPQLYTLFP---P-----DGQDEIKSAASVINWL 103 (307)
T ss_pred CeEEecCCcC-CCccEEEEeechhhhhH-HHHHHHHHHhhcCeEEEechhhcccC---C-----CchHHHHHHHHHHHHH
Confidence 3444556554 56899999999987766 66889999999999999999874211 1 2233356666667766
Q ss_pred HHhc--------C-CCCCEEEEEechhhHHHHHHHHhcC--CCccEEEEeCCcCCCC
Q 035721 125 RARH--------A-PDLPAFLYSESLGGAIALYITLRQK--GAWDGLILNGAMCGIS 170 (308)
Q Consensus 125 ~~~~--------~-~~~~~~l~G~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~~ 170 (308)
.... . +..++.++|||.||..|..+|..+. -.+.++|.++|..+..
T Consensus 104 ~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 104 PEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTS 160 (307)
T ss_pred HhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCC
Confidence 5431 0 5678999999999999999998774 3588999999876644
No 130
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.36 E-value=7.5e-11 Score=84.26 Aligned_cols=174 Identities=16% Similarity=0.036 Sum_probs=106.3
Q ss_pred CcceEEEEccCCCccchHH---HHHHHHHHHcCCeEEEecCCC----CcCCCC--------cc------ccCC-------
Q 035721 57 TLGVLCVVHGFTGESSWIV---QLTAVLFAKSGFATCAIDHQG----HGFSDG--------LV------AHIP------- 108 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~---~~~~~~l~~~g~~v~~~d~~G----~G~s~~--------~~------~~~~------- 108 (308)
.++-|||+||+..+...+- ..+.+.|.+. +..+.+|-|- -+.++. +. ...+
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 4677999999998876441 2455666665 7888888662 111111 00 0000
Q ss_pred -CcchHHHHHHHHHHHHHHhcCCCCCE-EEEEechhhHHHHHHHHhcC--------CCccEEEEeCCcCCCCcCCCCCch
Q 035721 109 -DLNPVVEDAISFFDSFRARHAPDLPA-FLYSESLGGAIALYITLRQK--------GAWDGLILNGAMCGISQKFKPPWP 178 (308)
Q Consensus 109 -~~~~~~~d~~~~l~~~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p--------~~v~~~vl~~~~~~~~~~~~~~~~ 178 (308)
.....-+-+..+.+++..+. ++ .|+|+|.|+.++..++...+ ..++-+|++++......
T Consensus 83 ~~~~~~eesl~yl~~~i~enG----PFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~------- 151 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENG----PFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSK------- 151 (230)
T ss_pred ccccChHHHHHHHHHHHHHhC----CCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcc-------
Confidence 01111223444555555543 43 59999999999998887221 12566777776432110
Q ss_pred hhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEee
Q 035721 179 LEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHG 258 (308)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g 258 (308)
. .+.....+.+++|.|-|.|
T Consensus 152 ---------------------------~---------------------------------~~~~~~~~~i~~PSLHi~G 171 (230)
T KOG2551|consen 152 ---------------------------K---------------------------------LDESAYKRPLSTPSLHIFG 171 (230)
T ss_pred ---------------------------h---------------------------------hhhhhhccCCCCCeeEEec
Confidence 0 0111234578999999999
Q ss_pred CCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 259 GDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 259 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
+.|.+++.+.+..+++.+ ++..+.. ..+||.+. .. .+.+.+.++
T Consensus 172 ~~D~iv~~~~s~~L~~~~--~~a~vl~-HpggH~VP~~~--~~~~~i~~f 216 (230)
T KOG2551|consen 172 ETDTIVPSERSEQLAESF--KDATVLE-HPGGHIVPNKA--KYKEKIADF 216 (230)
T ss_pred ccceeecchHHHHHHHhc--CCCeEEe-cCCCccCCCch--HHHHHHHHH
Confidence 999999999999999999 4554444 44899998 44 345555544
No 131
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.34 E-value=5.2e-10 Score=81.16 Aligned_cols=240 Identities=14% Similarity=0.083 Sum_probs=135.4
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHc-C--CeEEEecCCCCcCCCC--------ccccCCCcchHHHHHHHHHHHH
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKS-G--FATCAIDHQGHGFSDG--------LVAHIPDLNPVVEDAISFFDSF 124 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-g--~~v~~~d~~G~G~s~~--------~~~~~~~~~~~~~d~~~~l~~~ 124 (308)
..++.+++++|.+|... |+..++..|..+ + ..++.+...||-.-+. .....+++++.++.-.++++..
T Consensus 27 ~~~~li~~IpGNPG~~g-FY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~ 105 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLG-FYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEY 105 (301)
T ss_pred CCceEEEEecCCCCchh-HHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHh
Confidence 45889999999999988 667888887654 2 5589998888865441 1112345666666655665543
Q ss_pred HHhcCCCCCEEEEEechhhHHHHHHHHhcC--CCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCC
Q 035721 125 RARHAPDLPAFLYSESLGGAIALYITLRQK--GAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSL 202 (308)
Q Consensus 125 ~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (308)
.- .+.+++++|||.|+++.+....... -.|.+++++-|...--......+.....+..+....... .+
T Consensus 106 ~P---k~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt-------~y 175 (301)
T KOG3975|consen 106 VP---KDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLT-------SY 175 (301)
T ss_pred CC---CCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhhee-------ee
Confidence 22 4569999999999999999887433 347777777664332111111111111111111000000 00
Q ss_pred CCcccccHHHHHHHhhCCCCCCC--------------cchHHHH-----HHHHHHHHHhhhhcCCCCcceEEEeeCCCcc
Q 035721 203 PMVSFKEEWKRKLALSSPRRPVA--------------RPRAATA-----LELLRVSRDLQGRFEEVEVPMLICHGGDDVV 263 (308)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~-----~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 263 (308)
.-..+...+.+........+... ....+.. .++..-.....+.+++-.+-+.+.+|..|.+
T Consensus 176 i~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW 255 (301)
T KOG3975|consen 176 IYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGW 255 (301)
T ss_pred eeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCCCC
Confidence 00000011111111111000000 0000000 1111111112233455567889999999999
Q ss_pred cChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHHhhhc
Q 035721 264 CDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~~ 307 (308)
||.+....+.+.++..++++-+ +++.|.+. .+.+..++.+.+-
T Consensus 256 ~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~ 299 (301)
T KOG3975|consen 256 VPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDM 299 (301)
T ss_pred cchHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHh
Confidence 9999999999999765677766 78999999 8888777777653
No 132
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.33 E-value=2e-11 Score=98.27 Aligned_cols=110 Identities=22% Similarity=0.247 Sum_probs=63.3
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCC------CCc---cc---------------cCCC--
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFS------DGL---VA---------------HIPD-- 109 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s------~~~---~~---------------~~~~-- 109 (308)
.+-|+|||-||++++... +..++..|+.+||.|+++|+|..-.. +.. .. ....
T Consensus 98 ~~~PvvIFSHGlgg~R~~-yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTS-YSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--TTT-THHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcchhh-HHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 457999999999999874 47899999999999999999953211 000 00 0000
Q ss_pred --------cchHHHHHHHHHHHHHHhc-------------------C--CCCCEEEEEechhhHHHHHHHHhcCCCccEE
Q 035721 110 --------LNPVVEDAISFFDSFRARH-------------------A--PDLPAFLYSESLGGAIALYITLRQKGAWDGL 160 (308)
Q Consensus 110 --------~~~~~~d~~~~l~~~~~~~-------------------~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~ 160 (308)
++.-+.++..+++.+..-. + +..++.++|||+||..++..+.+. .++++.
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~ 255 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceE
Confidence 0111345666666554210 0 245799999999999999888877 579999
Q ss_pred EEeCCcC
Q 035721 161 ILNGAMC 167 (308)
Q Consensus 161 vl~~~~~ 167 (308)
|+++++.
T Consensus 256 I~LD~W~ 262 (379)
T PF03403_consen 256 ILLDPWM 262 (379)
T ss_dssp EEES---
T ss_pred EEeCCcc
Confidence 9999964
No 133
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.30 E-value=6.4e-12 Score=93.39 Aligned_cols=154 Identities=16% Similarity=0.118 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCc
Q 035721 115 EDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTW 193 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (308)
+-+..+++++..... +..+|.|+|.|.||-+|+.+|..+| .|+++|.++|............... ..++..
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~-------~~lp~~ 75 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSS-------KPLPYL 75 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE---------EE---
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCC-------ccCCcC
Confidence 345667777776644 5679999999999999999999999 6999999998655432211000000 000000
Q ss_pred ccccCCCCC-CCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHH-HHH
Q 035721 194 RVVPTRGSL-PMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPAC-VEE 271 (308)
Q Consensus 194 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~ 271 (308)
......... ................ . ......-.+.++++|+|+|.|++|.+.|... ++.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~---------------~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~ 137 (213)
T PF08840_consen 76 PFDISKFSWNEPGLLRSRYAFELADD---K---------------AVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQ 137 (213)
T ss_dssp -B-GGG-EE-TTS-EE-TT-B--TTT---G---------------GGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHH
T ss_pred CcChhhceecCCcceehhhhhhcccc---c---------------ccccccccHHHcCCCEEEEEeCCCCccchHHHHHH
Confidence 000000000 0000000000000000 0 0000112356789999999999999998654 445
Q ss_pred HHHHhcC---C-CCcEEEecCCccccc
Q 035721 272 LYKRAAS---K-DKTLSIYPGMWHQLI 294 (308)
Q Consensus 272 ~~~~~~~---~-~~~~~~~~~~gH~~~ 294 (308)
+.+++.. + +.+.+.|+++||.+.
T Consensus 138 i~~rL~~~~~~~~~~~l~Y~~aGH~i~ 164 (213)
T PF08840_consen 138 IEERLKAAGFPHNVEHLSYPGAGHLIE 164 (213)
T ss_dssp HHHHHHCTT-----EEEEETTB-S---
T ss_pred HHHHHHHhCCCCcceEEEcCCCCceec
Confidence 5555542 2 468889999999975
No 134
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.30 E-value=1.2e-10 Score=110.19 Aligned_cols=100 Identities=18% Similarity=0.102 Sum_probs=81.9
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
.++++++||++++.. .|..+.+.|.. ++.|++++.+|++.+.. ..++++++++++.+.++.+.. ..+++++
T Consensus 1068 ~~~l~~lh~~~g~~~-~~~~l~~~l~~-~~~v~~~~~~g~~~~~~---~~~~l~~la~~~~~~i~~~~~----~~p~~l~ 1138 (1296)
T PRK10252 1068 GPTLFCFHPASGFAW-QFSVLSRYLDP-QWSIYGIQSPRPDGPMQ---TATSLDEVCEAHLATLLEQQP----HGPYHLL 1138 (1296)
T ss_pred CCCeEEecCCCCchH-HHHHHHHhcCC-CCcEEEEECCCCCCCCC---CCCCHHHHHHHHHHHHHhhCC----CCCEEEE
Confidence 467999999998876 67889998865 59999999999986532 225889999999888876543 2389999
Q ss_pred EechhhHHHHHHHHh---cCCCccEEEEeCCc
Q 035721 138 SESLGGAIALYITLR---QKGAWDGLILNGAM 166 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~---~p~~v~~~vl~~~~ 166 (308)
|||+||.+|..+|.+ .++++..++++++.
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 999999999999986 46789999998874
No 135
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.26 E-value=7.6e-11 Score=88.17 Aligned_cols=107 Identities=17% Similarity=0.096 Sum_probs=70.5
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHH--------cCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhc
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAK--------SGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARH 128 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~ 128 (308)
.+.+|||+||.+++.. .++.+...+.+ ..++++++|+......-. . ..+.+..+-+.+.++.+....
T Consensus 3 ~g~pVlFIhG~~Gs~~-q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~--g--~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK-QVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH--G--RTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCCCCHh-HHHHHHHHHhhhhhhccCccceeEEEeccCccccccc--c--ccHHHHHHHHHHHHHHHHHhh
Confidence 3678999999988876 44566655522 147899999876432111 1 133344444444554443322
Q ss_pred ----CCCCCEEEEEechhhHHHHHHHHhcC---CCccEEEEeCCcCC
Q 035721 129 ----APDLPAFLYSESLGGAIALYITLRQK---GAWDGLILNGAMCG 168 (308)
Q Consensus 129 ----~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~ 168 (308)
.+..+++++||||||.+|-.++...+ +.|+.+|.++++..
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHR 124 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCC
Confidence 16789999999999999888776543 47999999887643
No 136
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.21 E-value=3.5e-10 Score=85.47 Aligned_cols=205 Identities=13% Similarity=0.084 Sum_probs=117.8
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHH-HcCCe----EEEecCCCC----cCCCC----c------cccC-CCcchHHHH
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFA-KSGFA----TCAIDHQGH----GFSDG----L------VAHI-PDLNPVVED 116 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~-~~g~~----v~~~d~~G~----G~s~~----~------~~~~-~~~~~~~~d 116 (308)
...+.||+||++++.. .+..++..+. ++|.. ++.++.-|. |.=.. + .... .+....+..
T Consensus 10 ~~tPTifihG~~gt~~-s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 10 STTPTIFIHGYGGTAN-SFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp S-EEEEEE--TTGGCC-CCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred CCCcEEEECCCCCChh-HHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 3567999999999877 4478999997 55542 344444443 21111 0 0011 245567889
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC-----CccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCC
Q 035721 117 AISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG-----AWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVP 191 (308)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (308)
+..++..|..++ .-.++-+|||||||..++.++..+.. ++..+|.+++++............ .
T Consensus 89 l~~vl~~L~~~Y-~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~-------~---- 156 (255)
T PF06028_consen 89 LKKVLKYLKKKY-HFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQ-------N---- 156 (255)
T ss_dssp HHHHHHHHHHCC---SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTT-------T----
T ss_pred HHHHHHHHHHhc-CCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchh-------h----
Confidence 999999998887 77799999999999999999887532 589999998865532111100000 0
Q ss_pred CcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHh-hhhcCCCCcceEEEeeC------CCccc
Q 035721 192 TWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDL-QGRFEEVEVPMLICHGG------DDVVC 264 (308)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~P~l~i~g~------~D~~~ 264 (308)
.+.... +.. ....+...... ...+ .-.+.+|-|.|. .|..|
T Consensus 157 ---------~~~~~g-------------------p~~---~~~~y~~l~~~~~~~~-p~~i~VLnI~G~~~~g~~sDG~V 204 (255)
T PF06028_consen 157 ---------DLNKNG-------------------PKS---MTPMYQDLLKNRRKNF-PKNIQVLNIYGDLEDGSNSDGIV 204 (255)
T ss_dssp ----------CSTT--------------------BSS-----HHHHHHHHTHGGGS-TTT-EEEEEEEESBTTCSBTSSS
T ss_pred ---------hhcccC-------------------Ccc---cCHHHHHHHHHHHhhC-CCCeEEEEEecccCCCCCCCeEE
Confidence 000000 000 00111111111 1222 225789999999 89999
Q ss_pred ChHHHHHHHHHhcC--CCCcEEEecC--Cccccc-CCchhhHHHhhhc
Q 035721 265 DPACVEELYKRAAS--KDKTLSIYPG--MWHQLI-GEPEENVELVFGE 307 (308)
Q Consensus 265 ~~~~~~~~~~~~~~--~~~~~~~~~~--~gH~~~-~~~~~~~~~i~~~ 307 (308)
|...+..+...+.. ...+-.++.| +.|.-. +++ ++.+.|.++
T Consensus 205 ~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~F 251 (255)
T PF06028_consen 205 PNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQF 251 (255)
T ss_dssp BHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHH
T ss_pred eHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHH
Confidence 99999888888753 2345556654 689888 666 456666554
No 137
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.20 E-value=3.8e-10 Score=80.14 Aligned_cols=177 Identities=18% Similarity=0.149 Sum_probs=111.9
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCC-----------------CccccCCCcchHHHHHHHH
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSD-----------------GLVAHIPDLNPVVEDAISF 120 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~-----------------~~~~~~~~~~~~~~d~~~~ 120 (308)
..+||++||.+.++. -|..+.+.|.-.+..-+++.-|-.-.+. ........+...++.+..+
T Consensus 3 ~atIi~LHglGDsg~-~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGS-GWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCc-cHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 457999999998877 3455666665556667776443221110 0000112334445556666
Q ss_pred HHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCC
Q 035721 121 FDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRG 200 (308)
Q Consensus 121 l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (308)
++..-...-+.+++.+-|+|+||.+++..+..+|..+.+++..++.........
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~-------------------------- 135 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGL-------------------------- 135 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhc--------------------------
Confidence 655544321567899999999999999999999888888887666433110000
Q ss_pred CCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcC--
Q 035721 201 SLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAAS-- 278 (308)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-- 278 (308)
... ....+ ..|++..||+.|+++|..-.+...+.+..
T Consensus 136 --~~~-------------------------------------~~~~~--~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~ 174 (206)
T KOG2112|consen 136 --PGW-------------------------------------LPGVN--YTPILLCHGTADPLVPFRFGEKSAQFLKSLG 174 (206)
T ss_pred --cCC-------------------------------------ccccC--cchhheecccCCceeehHHHHHHHHHHHHcC
Confidence 000 00001 57999999999999998766665555532
Q ss_pred CCCcEEEecCCccccc-CCchhhHH
Q 035721 279 KDKTLSIYPGMWHQLI-GEPEENVE 302 (308)
Q Consensus 279 ~~~~~~~~~~~gH~~~-~~~~~~~~ 302 (308)
..++++.+++.+|... ++-+++..
T Consensus 175 ~~~~f~~y~g~~h~~~~~e~~~~~~ 199 (206)
T KOG2112|consen 175 VRVTFKPYPGLGHSTSPQELDDLKS 199 (206)
T ss_pred CceeeeecCCccccccHHHHHHHHH
Confidence 2389999999999988 55554443
No 138
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.20 E-value=4.7e-11 Score=87.85 Aligned_cols=92 Identities=18% Similarity=0.162 Sum_probs=59.9
Q ss_pred ceEEEEccCCCccchHHHHHHHHHHHcCCe---EEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEE
Q 035721 59 GVLCVVHGFTGESSWIVQLTAVLFAKSGFA---TCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~---v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~ 135 (308)
.+|||+||.+++...-|..+.+.|.++||. |+++++-....+...... ....+.++++.++++.+.... +. +|.
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~-~~~~~~~~~l~~fI~~Vl~~T-Ga-kVD 78 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNA-HMSCESAKQLRAFIDAVLAYT-GA-KVD 78 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHH-HB-HHHHHHHHHHHHHHHHHH-T---EE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCccccc-ccchhhHHHHHHHHHHHHHhh-CC-EEE
Confidence 369999999986655678999999999999 899998544432221111 123345688999998888764 55 999
Q ss_pred EEEechhhHHHHHHHHhc
Q 035721 136 LYSESLGGAIALYITLRQ 153 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~~ 153 (308)
||||||||.++-.+....
T Consensus 79 IVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 79 IVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEEETCHHHHHHHHHHHC
T ss_pred EEEcCCcCHHHHHHHHHc
Confidence 999999999998887644
No 139
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=99.17 E-value=1e-10 Score=92.24 Aligned_cols=114 Identities=15% Similarity=0.154 Sum_probs=72.0
Q ss_pred CCcceEEEEccCCCcc-c-hHHHHHHHHHHH---cCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-
Q 035721 56 KTLGVLCVVHGFTGES-S-WIVQLTAVLFAK---SGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA- 129 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~-~-~~~~~~~~~l~~---~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~- 129 (308)
.++|++|++||+.++. . .+...+.+.+.. .++.|+++|+...-...... .........+.+..+|+.|....+
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~-a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQ-AVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHH-HHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccc-hhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 5689999999999887 2 344566665544 47999999996432211000 001233445566677777664333
Q ss_pred CCCCEEEEEechhhHHHHHHHHhcCC--CccEEEEeCCcCCCC
Q 035721 130 PDLPAFLYSESLGGAIALYITLRQKG--AWDGLILNGAMCGIS 170 (308)
Q Consensus 130 ~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~ 170 (308)
+.+++++||||+||.+|-.++..... ++..++.++|+....
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F 190 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLF 190 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTT
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccc
Confidence 67799999999999999999988877 899999999976543
No 140
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.15 E-value=2e-09 Score=80.67 Aligned_cols=128 Identities=14% Similarity=0.096 Sum_probs=93.0
Q ss_pred cCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHH--HHHH-HcCCeEEEecCC-C------CcCCCCccccC
Q 035721 38 NSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTA--VLFA-KSGFATCAIDHQ-G------HGFSDGLVAHI 107 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~--~~l~-~~g~~v~~~d~~-G------~G~s~~~~~~~ 107 (308)
..+|.+..|+++.|.......|.||++||..++...+ +... +.|+ ..||-|+.+|-- + .+.+..+...
T Consensus 41 ~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~-~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~- 118 (312)
T COG3509 41 DVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQ-LHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADR- 118 (312)
T ss_pred ccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHh-hcccchhhhhcccCcEEECcCccccccCCCcccccCCcccc-
Confidence 5678889999999887655668999999998887633 2221 3343 359999999532 2 2222222111
Q ss_pred CCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 108 PDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
..-.+-+..|.++++.+..+++ ++.+|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 119 ~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 119 RRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 1223346788888888888877 88899999999999999999999999999988887755
No 141
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.14 E-value=8.1e-09 Score=80.56 Aligned_cols=87 Identities=18% Similarity=0.165 Sum_probs=56.4
Q ss_pred HHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhc---C--CCCCEEEEEechhhHHHHHHH
Q 035721 76 QLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARH---A--PDLPAFLYSESLGGAIALYIT 150 (308)
Q Consensus 76 ~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~---~--~~~~~~l~G~S~Gg~~a~~~a 150 (308)
..++..+.++||.|+++|+.|.|..- ..-...+..+.+.++..+... + ...++.++|||.||..++..+
T Consensus 16 ~~~l~~~L~~GyaVv~pDY~Glg~~y------~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA 89 (290)
T PF03583_consen 16 APFLAAWLARGYAVVAPDYEGLGTPY------LNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAA 89 (290)
T ss_pred HHHHHHHHHCCCEEEecCCCCCCCcc------cCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHH
Confidence 35566677889999999999999711 122333444555554444321 1 246899999999999887666
Q ss_pred Hhc----CC-C--ccEEEEeCCcCC
Q 035721 151 LRQ----KG-A--WDGLILNGAMCG 168 (308)
Q Consensus 151 ~~~----p~-~--v~~~vl~~~~~~ 168 (308)
... || . +.+.++.++...
T Consensus 90 ~l~~~YApeL~~~l~Gaa~gg~~~d 114 (290)
T PF03583_consen 90 ELAPSYAPELNRDLVGAAAGGPPAD 114 (290)
T ss_pred HHhHHhCcccccceeEEeccCCccC
Confidence 443 33 2 677777676554
No 142
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=99.13 E-value=8.2e-11 Score=89.35 Aligned_cols=129 Identities=17% Similarity=0.149 Sum_probs=84.5
Q ss_pred cceeEEcCCCcEEEEEEec--CCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCC
Q 035721 32 SSEYITNSRGLRLFTQWWT--PLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPD 109 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~--~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~ 109 (308)
+...+.+.||.+|...... |......+..|||+-|..+-.+. .+..-=.+.||.|+.+++||++.|.+.+....+
T Consensus 215 ~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv---G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~ 291 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV---GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNT 291 (517)
T ss_pred eEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe---eeecChHHhCceeeccCCCCccccCCCCCcccc
Confidence 3445667777665542221 11111236688888887765441 222223356899999999999999987654323
Q ss_pred cchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 110 LNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
. ..+.++++..-...+ ..+.++++|+|.||.-+..+|..+|+ |+++|+-+++-.
T Consensus 292 ~----nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDD 346 (517)
T KOG1553|consen 292 L----NAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDD 346 (517)
T ss_pred h----HHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhh
Confidence 2 223334433332222 66799999999999999999999997 999999887543
No 143
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.13 E-value=1.1e-09 Score=89.49 Aligned_cols=230 Identities=12% Similarity=0.028 Sum_probs=143.2
Q ss_pred cccccccccceeEEcCCCcEEEEEEecCCC-CCCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCC
Q 035721 24 YARHSVSHSSEYITNSRGLRLFTQWWTPLP-PAKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSD 101 (308)
Q Consensus 24 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~-~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 101 (308)
++..++..+..+.++.||++|.|.+.. ++ ...+.|++|+--|...-+. ..+........++|...+..+.||-|+=.
T Consensus 387 FDa~~~~veQ~~atSkDGT~IPYFiv~-K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfG 465 (648)
T COG1505 387 FDADNYEVEQFFATSKDGTRIPYFIVR-KGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFG 465 (648)
T ss_pred cCccCceEEEEEEEcCCCccccEEEEe-cCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccC
Confidence 344566777788889999999999987 33 1125777776655433221 12233446677889999999999988755
Q ss_pred Cccc---cCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCc
Q 035721 102 GLVA---HIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPW 177 (308)
Q Consensus 102 ~~~~---~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~ 177 (308)
+... ....-+...+|..++.+.|..+.. .++++.+.|-|-||.+.-....++|+.+.++|+-.|....-...
T Consensus 466 p~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh---- 541 (648)
T COG1505 466 PEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYH---- 541 (648)
T ss_pred HHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhc----
Confidence 4211 112344567899999998888754 67789999999999999999999999999998777754422100
Q ss_pred hhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcC--CCCcceEE
Q 035721 178 PLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFE--EVEVPMLI 255 (308)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~P~l~ 255 (308)
.......|. ..+- .+........+.....+ .+++ ..--|+||
T Consensus 542 --------------------------~l~aG~sW~-~EYG--------~Pd~P~d~~~l~~YSPy-~nl~~g~kYP~~LI 585 (648)
T COG1505 542 --------------------------LLTAGSSWI-AEYG--------NPDDPEDRAFLLAYSPY-HNLKPGQKYPPTLI 585 (648)
T ss_pred --------------------------ccccchhhH-hhcC--------CCCCHHHHHHHHhcCch-hcCCccccCCCeEE
Confidence 000000000 0000 00000000011110111 1111 12348999
Q ss_pred EeeCCCcccChHHHHHHHHHhcCCCCcEEEe--cCCccccc
Q 035721 256 CHGGDDVVCDPACVEELYKRAASKDKTLSIY--PGMWHQLI 294 (308)
Q Consensus 256 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~--~~~gH~~~ 294 (308)
-.+.+|.-|.|.+++.++..+...+.....+ .++||.--
T Consensus 586 TTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~ 626 (648)
T COG1505 586 TTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGA 626 (648)
T ss_pred EcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCC
Confidence 9999999999999999999986544444444 36999887
No 144
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.11 E-value=5.7e-10 Score=91.08 Aligned_cols=92 Identities=12% Similarity=0.091 Sum_probs=73.9
Q ss_pred chHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHH
Q 035721 72 SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITL 151 (308)
Q Consensus 72 ~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 151 (308)
..+|..+++.|.+.||.+ ..|++|+|.+.+.. ...++..+++.++++.+.... +..+++|+||||||.++..++.
T Consensus 107 ~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~---~~~~~~~~~Lk~lIe~~~~~~-g~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 107 VYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQS---NRLPETMDGLKKKLETVYKAS-GGKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHHHHHHHHcCCcc-CCCcccCCCCcccc---ccHHHHHHHHHHHHHHHHHHc-CCCCEEEEEECHhHHHHHHHHH
Confidence 347899999999999865 88999999886642 134666788888888776653 5679999999999999999998
Q ss_pred hcCCC----ccEEEEeCCcCC
Q 035721 152 RQKGA----WDGLILNGAMCG 168 (308)
Q Consensus 152 ~~p~~----v~~~vl~~~~~~ 168 (308)
.+|+. |+++|.++++..
T Consensus 182 ~~p~~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 182 LHSDVFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred HCCHhHHhHhccEEEECCCCC
Confidence 88853 788999887654
No 145
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.09 E-value=3.5e-08 Score=80.68 Aligned_cols=125 Identities=14% Similarity=0.051 Sum_probs=74.8
Q ss_pred CCcEEEEEEecCCCC-CCCcceEEEEccCCCccchHHHHHHHHHHHcCC----eEEEecCCCCcCCCCccccCCC-cchH
Q 035721 40 RGLRLFTQWWTPLPP-AKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGF----ATCAIDHQGHGFSDGLVAHIPD-LNPV 113 (308)
Q Consensus 40 ~g~~l~~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~----~v~~~d~~G~G~s~~~~~~~~~-~~~~ 113 (308)
-|.+..+.+|.|++. ..+.|+|+++||.............+.|.++|. .++.+|-.+............. ...+
T Consensus 190 Lg~~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l 269 (411)
T PRK10439 190 LGNSRRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAV 269 (411)
T ss_pred cCCceEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHH
Confidence 355667777877643 245789999999543222112244556666653 3577775321110000000001 1122
Q ss_pred HHHHHHHHHHHHHhcC---CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 114 VEDAISFFDSFRARHA---PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
++++...++. .+. +.++.+|.|+||||..|+.++.++|+++.+++.+++..
T Consensus 270 ~~eLlP~I~~---~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 270 QQELLPQVRA---IAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHH---hCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 3444444433 322 56688999999999999999999999999999999853
No 146
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=99.06 E-value=2.5e-09 Score=80.56 Aligned_cols=110 Identities=16% Similarity=0.155 Sum_probs=73.3
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCC--eEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGF--ATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~--~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
.+.++||+||+..+...-....++.....++ .++.+.||+.|.-..-.....+......++..+|+.+.... +..+|
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~-~~~~I 95 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAP-GIKRI 95 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhcc-CCceE
Confidence 4789999999987755333334433333334 69999999887632211111133444567777887776653 56799
Q ss_pred EEEEechhhHHHHHHHHhc----C-----CCccEEEEeCCcC
Q 035721 135 FLYSESLGGAIALYITLRQ----K-----GAWDGLILNGAMC 167 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~~----p-----~~v~~~vl~~~~~ 167 (308)
++++||||+.+.+...... + .++..+|+++|-.
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 9999999999998776542 1 2578889988843
No 147
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.06 E-value=2.1e-09 Score=76.12 Aligned_cols=129 Identities=17% Similarity=0.169 Sum_probs=79.9
Q ss_pred CcEEEEEEecCCCCC--CCcceEEEEccCCCccchHHH--HHHHHHHHcCCeEEEecCCCCcCCCCccccC---------
Q 035721 41 GLRLFTQWWTPLPPA--KTLGVLCVVHGFTGESSWIVQ--LTAVLFAKSGFATCAIDHQGHGFSDGLVAHI--------- 107 (308)
Q Consensus 41 g~~l~~~~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~--~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~--------- 107 (308)
+..+.+-+|.|+... ++-|++.++.|+.++.+.+.. .+.+.-.++|..|+.+|---.|..-......
T Consensus 25 ~c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGF 104 (283)
T KOG3101|consen 25 KCSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGF 104 (283)
T ss_pred ccceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCcee
Confidence 456677777776642 346899999999998775432 2334445679999999954333211100000
Q ss_pred ---CCcchHHH-------HHHHHHHHHHHh-cC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCC
Q 035721 108 ---PDLNPVVE-------DAISFFDSFRAR-HA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGI 169 (308)
Q Consensus 108 ---~~~~~~~~-------d~~~~l~~~~~~-~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 169 (308)
.+.+-|+. -..++.+.+... .. +..++.|.||||||.=|+..+.+.|.+.+++-..+|....
T Consensus 105 YvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 105 YVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred EEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 01122221 112222222211 11 6678999999999999999999999999999888876553
No 148
>PRK04940 hypothetical protein; Provisional
Probab=99.04 E-value=7e-09 Score=73.17 Aligned_cols=35 Identities=14% Similarity=-0.039 Sum_probs=29.3
Q ss_pred CCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCC
Q 035721 132 LPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGI 169 (308)
Q Consensus 132 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 169 (308)
.++.|+|.|+||+.|..++.++. -..|+++|....
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g---~~aVLiNPAv~P 94 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG---IRQVIFNPNLFP 94 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC---CCEEEECCCCCh
Confidence 37999999999999999999986 367778886553
No 149
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.03 E-value=1.8e-09 Score=81.31 Aligned_cols=101 Identities=18% Similarity=0.157 Sum_probs=80.9
Q ss_pred ceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEE
Q 035721 59 GVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYS 138 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G 138 (308)
|++.++|+.+|... .|..+...|... ..|+.++.||.+.-... ..+++++++...+.|....- ..+++++|
T Consensus 1 ~pLF~fhp~~G~~~-~~~~L~~~l~~~-~~v~~l~a~g~~~~~~~---~~~l~~~a~~yv~~Ir~~QP----~GPy~L~G 71 (257)
T COG3319 1 PPLFCFHPAGGSVL-AYAPLAAALGPL-LPVYGLQAPGYGAGEQP---FASLDDMAAAYVAAIRRVQP----EGPYVLLG 71 (257)
T ss_pred CCEEEEcCCCCcHH-HHHHHHHHhccC-ceeeccccCcccccccc---cCCHHHHHHHHHHHHHHhCC----CCCEEEEe
Confidence 46999999998876 668999999887 99999999999852221 23778887777777766654 44999999
Q ss_pred echhhHHHHHHHHhc---CCCccEEEEeCCcCC
Q 035721 139 ESLGGAIALYITLRQ---KGAWDGLILNGAMCG 168 (308)
Q Consensus 139 ~S~Gg~~a~~~a~~~---p~~v~~~vl~~~~~~ 168 (308)
||+||.+|...|.+- .+.|..++++++...
T Consensus 72 ~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 72 WSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999999998763 346999999998766
No 150
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=99.02 E-value=4.8e-08 Score=78.99 Aligned_cols=88 Identities=17% Similarity=0.165 Sum_probs=68.8
Q ss_pred HHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCC
Q 035721 77 LTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGA 156 (308)
Q Consensus 77 ~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~ 156 (308)
.+.-.|. .|+.|+.+.+. +.+....++.+.......+++.+.....+..+.+++|.|.||+.++.+|+.+|+.
T Consensus 92 evG~AL~-~GHPvYFV~F~------p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~ 164 (581)
T PF11339_consen 92 EVGVALR-AGHPVYFVGFF------PEPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDL 164 (581)
T ss_pred HHHHHHH-cCCCeEEEEec------CCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCc
Confidence 4555564 59999998875 2222234888888888888888887753333999999999999999999999999
Q ss_pred ccEEEEeCCcCCCCc
Q 035721 157 WDGLILNGAMCGISQ 171 (308)
Q Consensus 157 v~~~vl~~~~~~~~~ 171 (308)
+..+|+.+++..+..
T Consensus 165 ~gplvlaGaPlsywa 179 (581)
T PF11339_consen 165 VGPLVLAGAPLSYWA 179 (581)
T ss_pred cCceeecCCCccccc
Confidence 999999888776654
No 151
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.00 E-value=1.3e-08 Score=78.03 Aligned_cols=116 Identities=17% Similarity=0.131 Sum_probs=84.0
Q ss_pred ceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccch--H----HHHHHHHHHHcCCeEEEecCCCCcCCCCcccc
Q 035721 33 SEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSW--I----VQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH 106 (308)
Q Consensus 33 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~--~----~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~ 106 (308)
...+. .|+..|-.....-++. .+...||+.-|.++..+. . ...+.+.....|.+|+.+++||.|.|.+..
T Consensus 114 Rv~Iq-~D~~~IDt~~I~~~~a-~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~-- 189 (365)
T PF05677_consen 114 RVPIQ-YDGVKIDTMAIHQPEA-KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP-- 189 (365)
T ss_pred eEEEe-eCCEEEEEEEeeCCCC-CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC--
Confidence 33443 4888777655543333 457889999998876553 1 022344444458999999999999998764
Q ss_pred CCCcchHHHHHHHHHHHHHHhc-C-CCCCEEEEEechhhHHHHHHHHhcC
Q 035721 107 IPDLNPVVEDAISFFDSFRARH-A-PDLPAFLYSESLGGAIALYITLRQK 154 (308)
Q Consensus 107 ~~~~~~~~~d~~~~l~~~~~~~-~-~~~~~~l~G~S~Gg~~a~~~a~~~p 154 (308)
+.++++.|..+.++++..+. + ....+++.|||+||.++..++.++.
T Consensus 190 --s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 190 --SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred --CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 45889999999999998643 2 5579999999999999998776653
No 152
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.96 E-value=2.2e-08 Score=75.07 Aligned_cols=86 Identities=17% Similarity=0.103 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh-
Q 035721 74 IVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR- 152 (308)
Q Consensus 74 ~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~- 152 (308)
.|..+...|.. .+.|++++.+|++.+.... .+.+.+++.+...+.... ...+++++|||+||.++...+.+
T Consensus 14 ~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~~---~~~~~~~~~~~~~l~~~~----~~~~~~l~g~s~Gg~~a~~~a~~l 85 (212)
T smart00824 14 EYARLAAALRG-RRDVSALPLPGFGPGEPLP---ASADALVEAQAEAVLRAA----GGRPFVLVGHSSGGLLAHAVAARL 85 (212)
T ss_pred HHHHHHHhcCC-CccEEEecCCCCCCCCCCC---CCHHHHHHHHHHHHHHhc----CCCCeEEEEECHHHHHHHHHHHHH
Confidence 56788888876 4999999999998665432 245555554444333221 34489999999999999888876
Q ss_pred --cCCCccEEEEeCCcC
Q 035721 153 --QKGAWDGLILNGAMC 167 (308)
Q Consensus 153 --~p~~v~~~vl~~~~~ 167 (308)
.++.+.+++++++..
T Consensus 86 ~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 86 EARGIPPAAVVLLDTYP 102 (212)
T ss_pred HhCCCCCcEEEEEccCC
Confidence 346689999887643
No 153
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.95 E-value=4.4e-07 Score=71.47 Aligned_cols=132 Identities=16% Similarity=0.167 Sum_probs=87.3
Q ss_pred ceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccch--HHHHHHHHHHHcCCeEEEecCCCC--cCCCC------
Q 035721 33 SEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSW--IVQLTAVLFAKSGFATCAIDHQGH--GFSDG------ 102 (308)
Q Consensus 33 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~--G~s~~------ 102 (308)
+......++.+ ....|.+......+.+||++||.+.+..+ ....+-..|.+.||.++++.+|.- .....
T Consensus 63 e~~~L~~~~~~-flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~ 141 (310)
T PF12048_consen 63 EVQWLQAGEER-FLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAE 141 (310)
T ss_pred hcEEeecCCEE-EEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCC
Confidence 33333444433 33456666655678899999999988762 345788889899999999998871 10000
Q ss_pred ----cc--c-cCC-----------------CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC-Cc
Q 035721 103 ----LV--A-HIP-----------------DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG-AW 157 (308)
Q Consensus 103 ----~~--~-~~~-----------------~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v 157 (308)
.. . ... ....+..-+.+++..+... ++.+++|+||+.|+..++.+....+. .+
T Consensus 142 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~--~~~~ivlIg~G~gA~~~~~~la~~~~~~~ 219 (310)
T PF12048_consen 142 EVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQ--GGKNIVLIGHGTGAGWAARYLAEKPPPMP 219 (310)
T ss_pred CCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhc--CCceEEEEEeChhHHHHHHHHhcCCCccc
Confidence 00 0 000 0112334555555555554 55569999999999999999988774 58
Q ss_pred cEEEEeCCcC
Q 035721 158 DGLILNGAMC 167 (308)
Q Consensus 158 ~~~vl~~~~~ 167 (308)
+++|++++..
T Consensus 220 daLV~I~a~~ 229 (310)
T PF12048_consen 220 DALVLINAYW 229 (310)
T ss_pred CeEEEEeCCC
Confidence 9999999953
No 154
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.94 E-value=2.3e-08 Score=75.33 Aligned_cols=174 Identities=14% Similarity=0.164 Sum_probs=109.8
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCC----cc--cc-----------CC---C------
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDG----LV--AH-----------IP---D------ 109 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~----~~--~~-----------~~---~------ 109 (308)
.+-|+|||-||++++.. ++..++-.|+.+||.|.++++|.+..+-. +. .. .+ .
T Consensus 116 ~k~PvvvFSHGLggsRt-~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRT-LYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCccEEEEecccccchh-hHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 45699999999999887 55889999999999999999987643211 00 00 00 0
Q ss_pred --cchHHHHHHHHHHHHHHhc--------------------C--CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCC
Q 035721 110 --LNPVVEDAISFFDSFRARH--------------------A--PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGA 165 (308)
Q Consensus 110 --~~~~~~d~~~~l~~~~~~~--------------------~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 165 (308)
...-+.++..+++-+..-. + +..++.++|||+||..++.....+. ++++.|+++.
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~ 273 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDA 273 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeee
Confidence 0111233333333322110 0 3457899999999998887777665 5899998887
Q ss_pred cCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhh
Q 035721 166 MCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGR 245 (308)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (308)
+..+-. ...
T Consensus 274 WM~Pl~-----------------------------------------------------------------------~~~ 282 (399)
T KOG3847|consen 274 WMFPLD-----------------------------------------------------------------------QLQ 282 (399)
T ss_pred eecccc-----------------------------------------------------------------------hhh
Confidence 533110 122
Q ss_pred cCCCCcceEEEeeCCCcccChHHHHHHHHHhc-CCCCcEEEecCCccccc-CCchhhHHHh
Q 035721 246 FEEVEVPMLICHGGDDVVCDPACVEELYKRAA-SKDKTLSIYPGMWHQLI-GEPEENVELV 304 (308)
Q Consensus 246 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~-~~~~~~~~~i 304 (308)
.++.+.|+++|.-++ -.. .+....+.+... +.+..+.++.|+=|..+ +.|-.+-+.|
T Consensus 283 ~~~arqP~~finv~~-fQ~-~en~~vmKki~~~n~g~~~it~~GsVHqnfsDfpfv~p~~i 341 (399)
T KOG3847|consen 283 YSQARQPTLFINVED-FQW-NENLLVMKKIESQNEGNHVITLDGSVHQNFSDFPFVTPNWI 341 (399)
T ss_pred hhhccCCeEEEEccc-ccc-hhHHHHHHhhhCCCccceEEEEccceecccccCccccHHHH
Confidence 356678999999443 222 355555555543 23467888899999888 7665444433
No 155
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.91 E-value=2.7e-08 Score=76.83 Aligned_cols=128 Identities=16% Similarity=0.085 Sum_probs=74.1
Q ss_pred CcEEEEEEecCCC--CCCCcceEEEEccCCCccc-hHHHHHHHHHHHcC----CeEEEecCCCCcCCCCc---------c
Q 035721 41 GLRLFTQWWTPLP--PAKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSG----FATCAIDHQGHGFSDGL---------V 104 (308)
Q Consensus 41 g~~l~~~~~~~~~--~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g----~~v~~~d~~G~G~s~~~---------~ 104 (308)
|....+.++.|.+ ...+-|+|+++||...... .-.....+.+...| ..+++++..+.+..... .
T Consensus 5 g~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRR 84 (251)
T ss_dssp TEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCB
T ss_pred CCeEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccc
Confidence 4566777787776 4466799999999622111 11122333333432 34566665554411100 0
Q ss_pred -ccCCCcchHHHHH-HHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 105 -AHIPDLNPVVEDA-ISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 105 -~~~~~~~~~~~d~-~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
........+.+.+ .+++..+..... ...+..|+|+||||..|+.++.++|+.+.+++.++|...
T Consensus 85 ~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 85 ADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALD 151 (251)
T ss_dssp CTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESE
T ss_pred cccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccc
Confidence 0000111111211 234444444443 222389999999999999999999999999999998644
No 156
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.88 E-value=1.7e-08 Score=82.63 Aligned_cols=163 Identities=16% Similarity=0.218 Sum_probs=108.0
Q ss_pred CcceEEEEccCC-C--ccchHHHHHHHHHHHcC--CeEEEecCCCC-cCCCCccccCCCcchHHHHHHHHHHHHHHh--c
Q 035721 57 TLGVLCVVHGFT-G--ESSWIVQLTAVLFAKSG--FATCAIDHQGH-GFSDGLVAHIPDLNPVVEDAISFFDSFRAR--H 128 (308)
Q Consensus 57 ~~~~vv~~hG~~-~--~~~~~~~~~~~~l~~~g--~~v~~~d~~G~-G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~--~ 128 (308)
..|.++++||.+ . +++++| .+...|...| ..|.++|++.- |. .++...++.+..+.+....+ .
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~-~wqs~lsl~gevvev~tfdl~n~igG--------~nI~h~ae~~vSf~r~kvlei~g 245 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMW-SWQSRLSLKGEVVEVPTFDLNNPIGG--------ANIKHAAEYSVSFDRYKVLEITG 245 (784)
T ss_pred CCceEEeccCCCCCCccchHHH-hHHHHHhhhceeeeeccccccCCCCC--------cchHHHHHHHHHHhhhhhhhhhc
Confidence 368899999987 1 222232 3334443333 45667777631 21 25555666666666533222 1
Q ss_pred C-CCCCEEEEEechhhHHHHHHHHhcC-CCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcc
Q 035721 129 A-PDLPAFLYSESLGGAIALYITLRQK-GAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVS 206 (308)
Q Consensus 129 ~-~~~~~~l~G~S~Gg~~a~~~a~~~p-~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (308)
. ...+++|+|.|||+.++.+.+...- ..|+++|+++-........ ..
T Consensus 246 efpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgp-------------------------------rg 294 (784)
T KOG3253|consen 246 EFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGP-------------------------------RG 294 (784)
T ss_pred cCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcc-------------------------------cC
Confidence 1 6779999999999988888776544 3488888877543321100 01
Q ss_pred cccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEe
Q 035721 207 FKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIY 286 (308)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (308)
.+ .+.+-.++.|+|||.|..|..++++..+.+.+++.. ..+++++
T Consensus 295 ir----------------------------------DE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA-~~elhVI 339 (784)
T KOG3253|consen 295 IR----------------------------------DEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQA-EVELHVI 339 (784)
T ss_pred Cc----------------------------------chhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhc-cceEEEe
Confidence 11 133445788999999999999999999999999974 6899999
Q ss_pred cCCccccc
Q 035721 287 PGMWHQLI 294 (308)
Q Consensus 287 ~~~gH~~~ 294 (308)
.+++|.+-
T Consensus 340 ~~adhsma 347 (784)
T KOG3253|consen 340 GGADHSMA 347 (784)
T ss_pred cCCCcccc
Confidence 99999887
No 157
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.87 E-value=1.4e-07 Score=78.48 Aligned_cols=145 Identities=12% Similarity=0.056 Sum_probs=96.6
Q ss_pred ccccccceeEEcCCCcEEEEEEecCCC--CCCCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCc
Q 035721 27 HSVSHSSEYITNSRGLRLFTQWWTPLP--PAKTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGL 103 (308)
Q Consensus 27 ~~~~~~~~~~~~~~g~~l~~~~~~~~~--~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 103 (308)
..+..+..+.+..||.++...+.-..+ -..+.|++|..-|.-+.+. ..+....-.|.++|+.-...--||-|.-...
T Consensus 415 ~~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~ 494 (682)
T COG1770 415 EDYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRA 494 (682)
T ss_pred hHeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChH
Confidence 344556677777899988887765543 2245777777777544432 2223333346678887666677886654431
Q ss_pred c---ccCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCc
Q 035721 104 V---AHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQ 171 (308)
Q Consensus 104 ~---~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~ 171 (308)
. +....-..-..|..+..++|..... ....++++|-|.||++.-..+...|+.++++|+-.|+.....
T Consensus 495 WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvlt 566 (682)
T COG1770 495 WYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLT 566 (682)
T ss_pred HHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhh
Confidence 1 1111112224566677777766543 667999999999999999999999999999999999877543
No 158
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.86 E-value=6.1e-08 Score=69.42 Aligned_cols=108 Identities=10% Similarity=0.040 Sum_probs=79.8
Q ss_pred cceEEEEccCCCccc--hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEE
Q 035721 58 LGVLCVVHGFTGESS--WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~ 135 (308)
+-.|||+-|++..-- .+.+.+...|-+.+|.++-+.++.+- ..-...++.+-++|+..+++++.... ...+|+
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy----~G~Gt~slk~D~edl~~l~~Hi~~~~-fSt~vV 110 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSY----NGYGTFSLKDDVEDLKCLLEHIQLCG-FSTDVV 110 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccc----cccccccccccHHHHHHHHHHhhccC-cccceE
Confidence 456899999876432 35678899999999999999876321 10111377788999999999887653 455999
Q ss_pred EEEechhhHHHHHHHHh--cCCCccEEEEeCCcCCCC
Q 035721 136 LYSESLGGAIALYITLR--QKGAWDGLILNGAMCGIS 170 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~~~ 170 (308)
++|||.|+.-.+.|..+ .+..+.+.|+.+|.....
T Consensus 111 L~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 111 LVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred EEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 99999999988888733 345688888888876543
No 159
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.78 E-value=7.4e-07 Score=68.18 Aligned_cols=222 Identities=15% Similarity=0.020 Sum_probs=116.9
Q ss_pred eEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEE
Q 035721 60 VLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYS 138 (308)
Q Consensus 60 ~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G 138 (308)
++|++=|+.+..........+...+.|+.++.+-.+-.....+. ......+..+++.+..... ...++.+-.
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~-------~~~~~~~~~l~~~l~~~~~~~~~~il~H~ 73 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS-------KRLAPAADKLLELLSDSQSASPPPILFHS 73 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec-------cchHHHHHHHHHHhhhhccCCCCCEEEEE
Confidence 36777787766554555666667778999999876532211111 2223333334444443321 223899999
Q ss_pred echhhHHHHHHHHh-----c-----CCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCcccc
Q 035721 139 ESLGGAIALYITLR-----Q-----KGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFK 208 (308)
Q Consensus 139 ~S~Gg~~a~~~a~~-----~-----p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (308)
+|.||...+..... . -.+++++|+-+++...... ..........+.... . .. ...
T Consensus 74 FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~--------~~~~~~~~~~~~~~~---~-~~---~~~ 138 (240)
T PF05705_consen 74 FSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYS--------SSARAFSAALPKSSP---R-WF---VPL 138 (240)
T ss_pred EECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccc--------cHHHHHHHHcCccch---h-hH---HHH
Confidence 99988876654331 1 1348899987775433210 011111111111100 0 00 000
Q ss_pred cHHHHHH---HhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcC--CCCcE
Q 035721 209 EEWKRKL---ALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAAS--KDKTL 283 (308)
Q Consensus 209 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~ 283 (308)
....... .................... ..+ .......+|-++++++.|.+++.+..++..+.... .+++.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~ 213 (240)
T PF05705_consen 139 WPLLQFLLRLSIISYFIFGYPDVQEYYRRA---LND--FANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRA 213 (240)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcHHHHHHHH---Hhh--hhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEE
Confidence 0000000 00000000000000001111 011 11234468999999999999999998888777642 34788
Q ss_pred EEecCCccccc--CCchhhHHHhhhcC
Q 035721 284 SIYPGMWHQLI--GEPEENVELVFGEM 308 (308)
Q Consensus 284 ~~~~~~gH~~~--~~~~~~~~~i~~~i 308 (308)
..++++.|.-+ .+|++..+.+.+++
T Consensus 214 ~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 214 EKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred ecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 88899999999 99999999988753
No 160
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.76 E-value=2.1e-08 Score=82.73 Aligned_cols=145 Identities=10% Similarity=0.021 Sum_probs=99.8
Q ss_pred ccccccccceeEEcCCCcEEEEEEecCCCC--CCCcceEEEEccCCCcc-chHHHHHHHHHHHcCCeEEEecCCCCcCCC
Q 035721 25 ARHSVSHSSEYITNSRGLRLFTQWWTPLPP--AKTLGVLCVVHGFTGES-SWIVQLTAVLFAKSGFATCAIDHQGHGFSD 101 (308)
Q Consensus 25 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 101 (308)
....+..+..++.+.||..+.-.+...+.. ..++|.+|..+|.-+-+ ...|+.--..|.+.|+.....|.||-|+-.
T Consensus 435 ~~s~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G 514 (712)
T KOG2237|consen 435 DASDYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYG 514 (712)
T ss_pred cccceEEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccc
Confidence 344556677788899999887766654332 23678888777754432 223333333355689999999999977543
Q ss_pred Cc---cccCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCC
Q 035721 102 GL---VAHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGI 169 (308)
Q Consensus 102 ~~---~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 169 (308)
.. .+....-....+|..+..+.|-.... .+.+..+.|.|.||.++..+..++|+.+.++|+-.|+...
T Consensus 515 ~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDv 586 (712)
T KOG2237|consen 515 EQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDV 586 (712)
T ss_pred cchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceeh
Confidence 31 11111223345777777787776644 7789999999999999999999999999999988887653
No 161
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.73 E-value=1.4e-07 Score=73.02 Aligned_cols=112 Identities=18% Similarity=0.143 Sum_probs=77.7
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCC--eEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCC
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGF--ATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLP 133 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~--~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~ 133 (308)
..+.++||+||+..+-..-....++.....|+ ..+.+.||..|.--.-.....+...-..++..+|+.+.... ...+
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~-~~~~ 192 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDK-PVKR 192 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCC-CCce
Confidence 34779999999987654233345666655554 57788899777533221111234445678899999998774 5678
Q ss_pred EEEEEechhhHHHHHHHHhc--------CCCccEEEEeCCcCC
Q 035721 134 AFLYSESLGGAIALYITLRQ--------KGAWDGLILNGAMCG 168 (308)
Q Consensus 134 ~~l~G~S~Gg~~a~~~a~~~--------p~~v~~~vl~~~~~~ 168 (308)
|+|++||||.+++++...+. +.+++-+|+.+|-.+
T Consensus 193 I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 193 IYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred EEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 99999999999999877642 346788888888544
No 162
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.73 E-value=4.3e-08 Score=83.33 Aligned_cols=123 Identities=17% Similarity=0.123 Sum_probs=77.0
Q ss_pred EEEEEEecCCCC--CCCcceEEEEccCCCccchHHHHHHHHHHHc--CCeEEEecCC-C---CcCCCCccccCCCcchHH
Q 035721 43 RLFTQWWTPLPP--AKTLGVLCVVHGFTGESSWIVQLTAVLFAKS--GFATCAIDHQ-G---HGFSDGLVAHIPDLNPVV 114 (308)
Q Consensus 43 ~l~~~~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~-G---~G~s~~~~~~~~~~~~~~ 114 (308)
-|+..+|.|... ..+.|+||++||.+.....-.......|... |+.|+.+++| | +..+... ......-.
T Consensus 78 cl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~---~~~~n~g~ 154 (493)
T cd00312 78 CLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLYPGDGLAREGDNVIVVSINYRLGVLGFLSTGDI---ELPGNYGL 154 (493)
T ss_pred CCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCCChHHHHhcCCCEEEEEecccccccccccCCCC---CCCcchhH
Confidence 456666777643 3467999999996533221000122344443 3899999999 3 2222111 01222335
Q ss_pred HHHHHHHHHHHHh---cC-CCCCEEEEEechhhHHHHHHHHh--cCCCccEEEEeCCcCC
Q 035721 115 EDAISFFDSFRAR---HA-PDLPAFLYSESLGGAIALYITLR--QKGAWDGLILNGAMCG 168 (308)
Q Consensus 115 ~d~~~~l~~~~~~---~~-~~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 168 (308)
.|...++++++.. .+ ++.+|.|+|+|.||.++..++.. .+..++++|+.++...
T Consensus 155 ~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 155 KDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 6777777777653 23 78899999999999998887765 2356888998877544
No 163
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.70 E-value=4.7e-06 Score=66.35 Aligned_cols=127 Identities=15% Similarity=0.125 Sum_probs=80.6
Q ss_pred CcEEEEEEecCCCCCCCcceEEEEccCCCccc-hHHHHHHHHHHHc-CCeEEEecCCCCcCCCCccc-------------
Q 035721 41 GLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS-WIVQLTAVLFAKS-GFATCAIDHQGHGFSDGLVA------------- 105 (308)
Q Consensus 41 g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~------------- 105 (308)
..+|.|+..-.+.. ..+..|+++.|+|++.. .+.+.+.+.++++ +..|+.+++-|+|.......
T Consensus 19 ~sKLEyri~ydd~K-e~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~iLk 97 (403)
T PF11144_consen 19 ESKLEYRISYDDEK-EIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYFDDIDKEILK 97 (403)
T ss_pred cceeeEEeecCCCC-CceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcCCHHHHHHHH
Confidence 34677877544332 45788999999999876 3556777888876 33455567777664321000
Q ss_pred -----------cCCC---cc-------------------------------------------hHHHHHHHHHHHHHHhc
Q 035721 106 -----------HIPD---LN-------------------------------------------PVVEDAISFFDSFRARH 128 (308)
Q Consensus 106 -----------~~~~---~~-------------------------------------------~~~~d~~~~l~~~~~~~ 128 (308)
...+ .. ..|-|+..++..+....
T Consensus 98 ~~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~k~~ 177 (403)
T PF11144_consen 98 KSLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLKKIF 177 (403)
T ss_pred HHHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 0000 00 01123334443343333
Q ss_pred C---CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 129 A---PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 129 ~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
. ++.|++++|+|.||++|...|.-.|..+++++=-++...
T Consensus 178 ~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 178 PKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred hcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 2 235999999999999999999999999999987776544
No 164
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.67 E-value=9.3e-07 Score=65.26 Aligned_cols=244 Identities=12% Similarity=0.011 Sum_probs=126.4
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCccchHHH-HHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHH---
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQ-LTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAI--- 118 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~-~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~--- 118 (308)
+-++..+.|.. ..+.-+.+-|.+.+.. +-+ .+...+.++|...+.+.-|-+|...++.... ..-+++.|+.
T Consensus 101 ~A~~~~liPQK---~~~KOG~~a~tgdh~y-~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~-~~Le~vtDlf~mG 175 (371)
T KOG1551|consen 101 TARVAWLIPQK---MADLCLSWALTGDHVY-TRRLVLSKPINKREIATMVLEKPFYGQRVPEEQII-HMLEYVTDLFKMG 175 (371)
T ss_pred ceeeeeecccC---cCCeeEEEeecCCcee-EeeeeecCchhhhcchheeeecccccccCCHHHHH-HHHHHHHHHHHhh
Confidence 33444455532 2455555555554432 212 3556666778999999999999876644322 2222233332
Q ss_pred -HHHHHHHHhc----C-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCC
Q 035721 119 -SFFDSFRARH----A-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPT 192 (308)
Q Consensus 119 -~~l~~~~~~~----~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (308)
+.|++..... . +..+..++|-||||.+|......++..|.-+=++++......... ..... ....+.+....
T Consensus 176 ~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~te-g~l~~-~~s~~~~~~~~ 253 (371)
T KOG1551|consen 176 RATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSATE-GLLLQ-DTSKMKRFNQT 253 (371)
T ss_pred HHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhhhh-hhhhh-hhHHHHhhccC
Confidence 2222222111 1 567999999999999999999988766655544444322111000 00011 11111111111
Q ss_pred cccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcc-----eEEEeeCCCcccChH
Q 035721 193 WRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVP-----MLICHGGDDVVCDPA 267 (308)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-----~l~i~g~~D~~~~~~ 267 (308)
.... ...+..-...+.. .. +.. ...+-.....+++..-+-...+.+..+| +.++.+++|..+|..
T Consensus 254 t~~~----~~~~r~p~Q~~~~-~~-~~~----srn~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~ 323 (371)
T KOG1551|consen 254 TNKS----GYTSRNPAQSYHL-LS-KEQ----SRNSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRT 323 (371)
T ss_pred cchh----hhhhhCchhhHHH-HH-HHh----hhcchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCcccccc
Confidence 0000 0000000000000 00 000 0111222233333222212233444444 678899999999998
Q ss_pred HHHHHHHHhcCCCCcEEEecCCccccc--CCchhhHHHhhh
Q 035721 268 CVEELYKRAASKDKTLSIYPGMWHQLI--GEPEENVELVFG 306 (308)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~gH~~~--~~~~~~~~~i~~ 306 (308)
.+..+.+.+ |++++..++ +||..- .+.+.+..+|.+
T Consensus 324 gv~~lQ~~W--Pg~eVr~~e-gGHVsayl~k~dlfRR~I~d 361 (371)
T KOG1551|consen 324 GVRSLQEIW--PGCEVRYLE-GGHVSAYLFKQDLFRRAIVD 361 (371)
T ss_pred CcHHHHHhC--CCCEEEEee-cCceeeeehhchHHHHHHHH
Confidence 899999999 789999999 889866 777777777654
No 165
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.66 E-value=8.3e-07 Score=74.12 Aligned_cols=110 Identities=20% Similarity=0.233 Sum_probs=72.6
Q ss_pred cceEEEEccCCCccchH--HHHHHHHHHHc-CCeEEEecCCCCcCCCCccc------cCCCcchHHHHHHHHHHHHHHhc
Q 035721 58 LGVLCVVHGFTGESSWI--VQLTAVLFAKS-GFATCAIDHQGHGFSDGLVA------HIPDLNPVVEDAISFFDSFRARH 128 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~--~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~------~~~~~~~~~~d~~~~l~~~~~~~ 128 (308)
.|++|++-|= +..... ...+...|+++ |-.++++++|-+|.|.+... ...+.++..+|+..++++++.+.
T Consensus 29 gpifl~~ggE-~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 29 GPIFLYIGGE-GPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp SEEEEEE--S-S-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCC-CccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 5666666553 333211 12244445544 78899999999999986322 12367888999999999998654
Q ss_pred C--CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 129 A--PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 129 ~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
. ...|++++|-|+||++|..+-.++|+.|.+.+..+++..
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 3 567999999999999999999999999999999887654
No 166
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.66 E-value=1.5e-06 Score=68.94 Aligned_cols=108 Identities=16% Similarity=0.057 Sum_probs=71.6
Q ss_pred CCcceEEEEccCCCccch------HHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC
Q 035721 56 KTLGVLCVVHGFTGESSW------IVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA 129 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~------~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~ 129 (308)
++.|+||++||.|..-.. +...+...|. ...+++.|+.-... ... ...+.....++.+..+++-...
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~--~~~--~~~yPtQL~qlv~~Y~~Lv~~~- 192 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSS--DEH--GHKYPTQLRQLVATYDYLVESE- 192 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEecccccc--ccC--CCcCchHHHHHHHHHHHHHhcc-
Confidence 347999999998754321 1223334443 36888888864320 011 1245566677777777777332
Q ss_pred CCCCEEEEEechhhHHHHHHHHhcC-----CCccEEEEeCCcCCCC
Q 035721 130 PDLPAFLYSESLGGAIALYITLRQK-----GAWDGLILNGAMCGIS 170 (308)
Q Consensus 130 ~~~~~~l~G~S~Gg~~a~~~a~~~p-----~~v~~~vl~~~~~~~~ 170 (308)
+..+++++|-|.||.+++.+++... ...+++|+++|+....
T Consensus 193 G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 193 GNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred CCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 6679999999999999987765321 2358999999998765
No 167
>COG3150 Predicted esterase [General function prediction only]
Probab=98.65 E-value=1.2e-06 Score=60.09 Aligned_cols=90 Identities=12% Similarity=0.208 Sum_probs=58.2
Q ss_pred EEEEccCCCccchHHHH-HHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEe
Q 035721 61 LCVVHGFTGESSWIVQL-TAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSE 139 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~-~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~ 139 (308)
||++|||.++....-.. +.+.+... .|-.+.+.+.... +....++.+..++...+.+ ...|+|-
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~--------~~~i~y~~p~l~h--~p~~a~~ele~~i~~~~~~-----~p~ivGs 66 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED--------VRDIEYSTPHLPH--DPQQALKELEKAVQELGDE-----SPLIVGS 66 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc--------ccceeeecCCCCC--CHHHHHHHHHHHHHHcCCC-----CceEEee
Confidence 89999999876633222 22333322 2222333332222 6777778888888777654 6899999
Q ss_pred chhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 140 SLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 140 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
|+||+.|.+++.++. +++ |+++|...
T Consensus 67 sLGGY~At~l~~~~G--ira-v~~NPav~ 92 (191)
T COG3150 67 SLGGYYATWLGFLCG--IRA-VVFNPAVR 92 (191)
T ss_pred cchHHHHHHHHHHhC--Chh-hhcCCCcC
Confidence 999999999999875 444 44566443
No 168
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.65 E-value=8.9e-08 Score=74.89 Aligned_cols=90 Identities=16% Similarity=0.144 Sum_probs=69.1
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEE
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFL 136 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l 136 (308)
+...-||+.|=|+-.. .-+.+.+.|.++|+.|+.+|-.-+=.|.+ +.++.++|+..++++...+. +..++.+
T Consensus 259 sd~~av~~SGDGGWr~-lDk~v~~~l~~~gvpVvGvdsLRYfW~~r------tPe~~a~Dl~r~i~~y~~~w-~~~~~~l 330 (456)
T COG3946 259 SDTVAVFYSGDGGWRD-LDKEVAEALQKQGVPVVGVDSLRYFWSER------TPEQIAADLSRLIRFYARRW-GAKRVLL 330 (456)
T ss_pred cceEEEEEecCCchhh-hhHHHHHHHHHCCCceeeeehhhhhhccC------CHHHHHHHHHHHHHHHHHhh-CcceEEE
Confidence 4556788888776655 33688999999999999999654444432 66778999999999887765 6779999
Q ss_pred EEechhhHHHHHHHHhcC
Q 035721 137 YSESLGGAIALYITLRQK 154 (308)
Q Consensus 137 ~G~S~Gg~~a~~~a~~~p 154 (308)
+|+|+|+-+.-..-.+.|
T Consensus 331 iGySfGADvlP~~~n~L~ 348 (456)
T COG3946 331 IGYSFGADVLPFAYNRLP 348 (456)
T ss_pred EeecccchhhHHHHHhCC
Confidence 999999987765555554
No 169
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.64 E-value=5e-07 Score=73.76 Aligned_cols=116 Identities=16% Similarity=0.193 Sum_probs=76.8
Q ss_pred eEEcCCCcEEEEEEecCCCCCCCcceEEEEc-cCCCccchHHHHHHHHHHHcCCeE-----EE-ecCCCCcCCCCccccC
Q 035721 35 YITNSRGLRLFTQWWTPLPPAKTLGVLCVVH-GFTGESSWIVQLTAVLFAKSGFAT-----CA-IDHQGHGFSDGLVAHI 107 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~h-G~~~~~~~~~~~~~~~l~~~g~~v-----~~-~d~~G~G~s~~~~~~~ 107 (308)
.+...+|+.+..--++...+ |-.+- .+. ...++|..+++.|.+.||.. .+ +|+|--- .
T Consensus 33 ~~~~~~gv~i~~~~~g~~~~------i~~ld~~~~-~~~~~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~------~-- 97 (389)
T PF02450_consen 33 HYSNDPGVEIRVPGFGGTSG------IEYLDPSFI-TGYWYFAKLIENLEKLGYDRGKDLFAAPYDWRLSP------A-- 97 (389)
T ss_pred ceecCCCceeecCCCCceee------eeecccccc-cccchHHHHHHHHHhcCcccCCEEEEEeechhhch------h--
Confidence 45556677766654542222 22221 111 11226789999999888852 23 6777210 0
Q ss_pred CCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC------CccEEEEeCCcCC
Q 035721 108 PDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG------AWDGLILNGAMCG 168 (308)
Q Consensus 108 ~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~------~v~~~vl~~~~~~ 168 (308)
..+++...+...|+..... .+.+++|+||||||.++..+....+. .|+++|.++++..
T Consensus 98 -~~~~~~~~lk~~ie~~~~~--~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 98 -ERDEYFTKLKQLIEEAYKK--NGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred -hHHHHHHHHHHHHHHHHHh--cCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 2446677888888877665 56799999999999999999887743 5999999988654
No 170
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.61 E-value=3e-07 Score=68.80 Aligned_cols=92 Identities=16% Similarity=0.101 Sum_probs=48.8
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHc--CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-CCCC
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKS--GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PDLP 133 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~ 133 (308)
+...|||+||+.++.. .|..+.+.+... .+.-..+...++...... ...+++..++.+..-+........ ...+
T Consensus 3 ~~hLvV~vHGL~G~~~-d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~--T~~gI~~~g~rL~~eI~~~~~~~~~~~~~ 79 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPA-DMRYLKNHLEKIPEDLPNARIVVLGYSNNEFK--TFDGIDVCGERLAEEILEHIKDYESKIRK 79 (217)
T ss_pred CCEEEEEeCCCCCCHH-HHHHHHHHHHHhhhhcchhhhhhhcccccccc--cchhhHHHHHHHHHHHHHhcccccccccc
Confidence 4678999999999976 556666666551 122112222222111111 112444444444333322222111 2248
Q ss_pred EEEEEechhhHHHHHHHH
Q 035721 134 AFLYSESLGGAIALYITL 151 (308)
Q Consensus 134 ~~l~G~S~Gg~~a~~~a~ 151 (308)
+.+||||+||.++-.+..
T Consensus 80 IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 80 ISFIGHSLGGLIARYALG 97 (217)
T ss_pred ceEEEecccHHHHHHHHH
Confidence 999999999998865554
No 171
>PLN02209 serine carboxypeptidase
Probab=98.60 E-value=3.5e-05 Score=63.71 Aligned_cols=136 Identities=15% Similarity=0.203 Sum_probs=84.5
Q ss_pred cceeEEcC--CCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHH---H-------------HHHH------cCC
Q 035721 32 SSEYITNS--RGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTA---V-------------LFAK------SGF 87 (308)
Q Consensus 32 ~~~~~~~~--~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~---~-------------~l~~------~g~ 87 (308)
...++... .+..++|..+.........|+|+++.|.+|.+. .+..+. + .|.. +-.
T Consensus 40 ~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 118 (437)
T PLN02209 40 ETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSC-LSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTA 118 (437)
T ss_pred EEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHH-hhhHHHhcCCceeccCCCCCCcccceeCCCchhhcC
Confidence 33444433 356788877766555456899999999988776 221111 1 1111 125
Q ss_pred eEEEec-CCCCcCCCCccc-cCCCcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHh----c------
Q 035721 88 ATCAID-HQGHGFSDGLVA-HIPDLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLR----Q------ 153 (308)
Q Consensus 88 ~v~~~d-~~G~G~s~~~~~-~~~~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~----~------ 153 (308)
.++-+| ..|.|.|..... ...+.++.++|+..+++..-.... ...+++|.|.|+||..+-.+|.. .
T Consensus 119 nllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~ 198 (437)
T PLN02209 119 NIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNP 198 (437)
T ss_pred cEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCC
Confidence 789999 558888864322 112333456778887776654432 45689999999999866555542 1
Q ss_pred CCCccEEEEeCCcCC
Q 035721 154 KGAWDGLILNGAMCG 168 (308)
Q Consensus 154 p~~v~~~vl~~~~~~ 168 (308)
+-.++|+++.++...
T Consensus 199 ~inl~Gi~igng~td 213 (437)
T PLN02209 199 PINLQGYVLGNPITH 213 (437)
T ss_pred ceeeeeEEecCcccC
Confidence 124789998888654
No 172
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.49 E-value=6e-06 Score=65.43 Aligned_cols=240 Identities=22% Similarity=0.189 Sum_probs=119.2
Q ss_pred cEEEEEEecCCCCC--CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccC---------CCc
Q 035721 42 LRLFTQWWTPLPPA--KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHI---------PDL 110 (308)
Q Consensus 42 ~~l~~~~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~---------~~~ 110 (308)
..+....+.|.... .+.|.+++.||+++...... .....++..++.+...+....|.+....... ...
T Consensus 31 ~~~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 109 (299)
T COG1073 31 IALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKEQSL-GYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSA 109 (299)
T ss_pred ceeeeEEEecCCCCccccCceEEeccCccccccCcc-hHHHHhhhceeEEeeeccccccccccccccccCccccccccch
Confidence 45566666666543 35788999999998876432 3677787888887877753333222211000 000
Q ss_pred ch---HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC--CccEEEEeCCcCCCCcCCCCCchh-hhhHH
Q 035721 111 NP---VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG--AWDGLILNGAMCGISQKFKPPWPL-EHLLF 184 (308)
Q Consensus 111 ~~---~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~~~~~~~~-~~~~~ 184 (308)
.. ....+...-...... ...+....|+++|+..+..++...+. ....++..+...+........... .....
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~~~~ 187 (299)
T COG1073 110 AVLLLLSEGVLDKDYRLLGA--SLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPELARE 187 (299)
T ss_pred hheeeeccccccHHHHHHhh--hcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHHHHh
Confidence 00 000000000011111 23488999999999999988887763 233444433332211111100000 00011
Q ss_pred HhhhhCCCcccccCCCCCCCcccccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCC-cceEEEeeCCCcc
Q 035721 185 TVAWLVPTWRVVPTRGSLPMVSFKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVE-VPMLICHGGDDVV 263 (308)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~l~i~g~~D~~ 263 (308)
....+......... ..... ........ ...+ ...+....+..+. +|+++++|.+|..
T Consensus 188 ~~~~~~~~~~~~~~--------~~~~~-----------~~~~~~~~-~~~~--~~~d~~~~~~~i~~~P~l~~~G~~D~~ 245 (299)
T COG1073 188 LIDYLITPGGFAPL--------PAPEA-----------PLDTLPLR-AVLL--LLLDPFDDAEKISPRPVLLVHGERDEV 245 (299)
T ss_pred hhhhhccCCCCCCC--------Ccccc-----------cccccccc-hhhh--ccCcchhhHhhcCCcceEEEecCCCcc
Confidence 11111110000000 00000 00000000 0000 0012223344454 7999999999999
Q ss_pred cChHHHHHHHHHhcCCCCcEEEecCCccccc-CCch---hhHHHhhh
Q 035721 264 CDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPE---ENVELVFG 306 (308)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~---~~~~~i~~ 306 (308)
+|...+..+++.......+..++++++|... .... +..+.+.+
T Consensus 246 vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~ 292 (299)
T COG1073 246 VPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAE 292 (299)
T ss_pred cchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHH
Confidence 9999999999888643568888899999988 4444 34444443
No 173
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.49 E-value=2.9e-07 Score=73.55 Aligned_cols=102 Identities=18% Similarity=0.152 Sum_probs=70.9
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCe---EEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFA---TCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~---v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
.-+++++||++.+.. .+..+...+...|+. ++.+++++.. .. .+.....+.+...++...... ...++
T Consensus 59 ~~pivlVhG~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~------~~~~~~~~ql~~~V~~~l~~~-ga~~v 129 (336)
T COG1075 59 KEPIVLVHGLGGGYG-NFLPLDYRLAILGWLTNGVYAFELSGGD-GT------YSLAVRGEQLFAYVDEVLAKT-GAKKV 129 (336)
T ss_pred CceEEEEccCcCCcc-hhhhhhhhhcchHHHhcccccccccccC-CC------ccccccHHHHHHHHHHHHhhc-CCCce
Confidence 447999999966665 446677777777777 8888888651 11 123333444444444433322 34599
Q ss_pred EEEEechhhHHHHHHHHhcC--CCccEEEEeCCcCC
Q 035721 135 FLYSESLGGAIALYITLRQK--GAWDGLILNGAMCG 168 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~ 168 (308)
.++|||+||.++..++...+ .+|+.++.++++-.
T Consensus 130 ~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 130 NLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred EEEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 99999999999999998888 78999999988643
No 174
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.44 E-value=1.9e-06 Score=74.33 Aligned_cols=124 Identities=20% Similarity=0.110 Sum_probs=74.3
Q ss_pred EEEEEEecCCCCCC--CcceEEEEccCCCccch---HHHHHHHHHHHcCCeEEEecCC----CCcCCCCccccCCCcchH
Q 035721 43 RLFTQWWTPLPPAK--TLGVLCVVHGFTGESSW---IVQLTAVLFAKSGFATCAIDHQ----GHGFSDGLVAHIPDLNPV 113 (308)
Q Consensus 43 ~l~~~~~~~~~~~~--~~~~vv~~hG~~~~~~~---~~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~ 113 (308)
-|+..+|.|..... +.|++|+|||.+..... ....-...+..++..||.+++| |+-.+...... .-.--
T Consensus 108 CL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~--~gN~G 185 (535)
T PF00135_consen 108 CLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP--SGNYG 185 (535)
T ss_dssp --EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH--BSTHH
T ss_pred HHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccC--chhhh
Confidence 46677787876533 37999999997543221 1123344566778999999998 22222111100 12334
Q ss_pred HHHHHHHHHHHHHh---cC-CCCCEEEEEechhhHHHHHHHHhc--CCCccEEEEeCCcCC
Q 035721 114 VEDAISFFDSFRAR---HA-PDLPAFLYSESLGGAIALYITLRQ--KGAWDGLILNGAMCG 168 (308)
Q Consensus 114 ~~d~~~~l~~~~~~---~~-~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~~ 168 (308)
..|...+|++++.. .+ ++.+|.|+|+|.||..+...+..- ...++++|+.++...
T Consensus 186 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 186 LLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred hhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 56888888888764 23 788999999999999877665542 357999999988543
No 175
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.40 E-value=4.9e-06 Score=61.28 Aligned_cols=108 Identities=12% Similarity=-0.018 Sum_probs=77.5
Q ss_pred ceEEEEccCCCccchHHHHHHHHHHHcC-----CeEEEecCCCC----cCCCCc----------cccCCCcchHHHHHHH
Q 035721 59 GVLCVVHGFTGESSWIVQLTAVLFAKSG-----FATCAIDHQGH----GFSDGL----------VAHIPDLNPVVEDAIS 119 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g-----~~v~~~d~~G~----G~s~~~----------~~~~~~~~~~~~d~~~ 119 (308)
-+.||+||++|+.. ....++..|.+.+ --++.+|--|. |.=+.. .....+..++...+..
T Consensus 46 iPTIfIhGsgG~as-S~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 46 IPTIFIHGSGGTAS-SLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred cceEEEecCCCChh-HHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 36799999999987 4477888887763 12566666652 111110 0111355667888999
Q ss_pred HHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC-----CccEEEEeCCcCC
Q 035721 120 FFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG-----AWDGLILNGAMCG 168 (308)
Q Consensus 120 ~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~ 168 (308)
++..|..++ +-.++-++||||||.-...|+..+.. .+..+|.+++.+.
T Consensus 125 ~msyL~~~Y-~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 125 AMSYLQKHY-NIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHhc-CCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 999999887 77799999999999999999887532 4889998887655
No 176
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.39 E-value=2.3e-06 Score=69.38 Aligned_cols=125 Identities=22% Similarity=0.204 Sum_probs=80.9
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCccc---hHHHHHHHHHHHcC-CeEEEecCCC--CcCCCCccc---cCCCcchH
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGESS---WIVQLTAVLFAKSG-FATCAIDHQG--HGFSDGLVA---HIPDLNPV 113 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~---~~~~~~~~~l~~~g-~~v~~~d~~G--~G~s~~~~~---~~~~~~~~ 113 (308)
-|+..+|.|.....+.|++|+|||.+.... .. ..-...|+++| +.|+++++|= +|.-+.... ......--
T Consensus 79 CL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~-~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~G 157 (491)
T COG2272 79 CLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEP-LYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLG 157 (491)
T ss_pred ceeEEeeccCCCCCCCcEEEEEeccccccCCCccc-ccChHHHHhcCCEEEEEeCcccccceeeehhhcccccccccccc
Confidence 466777888844466899999999754322 11 12345788887 9999999982 232211100 00111223
Q ss_pred HHHHHHHHHHHHHh---cC-CCCCEEEEEechhhHHHHHHHHh--cCCCccEEEEeCCcCC
Q 035721 114 VEDAISFFDSFRAR---HA-PDLPAFLYSESLGGAIALYITLR--QKGAWDGLILNGAMCG 168 (308)
Q Consensus 114 ~~d~~~~l~~~~~~---~~-~~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 168 (308)
..|...+|++++.. .+ ++++|.|+|+|.||+.++.+.+. ....++++|+.++...
T Consensus 158 l~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 158 LLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 56777777777654 23 88999999999999988776653 1245777888887664
No 177
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.39 E-value=7.5e-07 Score=67.57 Aligned_cols=107 Identities=15% Similarity=0.022 Sum_probs=52.5
Q ss_pred cceEEEEccCCCccc--hHHHHHHHHHHHc--CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCC
Q 035721 58 LGVLCVVHGFTGESS--WIVQLTAVLFAKS--GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLP 133 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~--~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~ 133 (308)
..+||+.||+|.+.. ..+..+.+.+.+. |.-|.+++.-....++........+.+.++.+.+.++.... -..-
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~---L~~G 81 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGNDPSEDVENSFFGNVNDQVEQVCEQLANDPE---LANG 81 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GG---GTT-
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECCCcchhhhhhHHHHHHHHHHHHHHHHhhChh---hhcc
Confidence 456999999997542 1234444444332 77788888632111111111112334444444444443222 1236
Q ss_pred EEEEEechhhHHHHHHHHhcCC-CccEEEEeCCcC
Q 035721 134 AFLYSESLGGAIALYITLRQKG-AWDGLILNGAMC 167 (308)
Q Consensus 134 ~~l~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~ 167 (308)
++++|+|.||.+.-.++.+.++ .|+.+|.+++.-
T Consensus 82 ~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 82 FNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred eeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 9999999999999999999864 699999887653
No 178
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.29 E-value=4.3e-05 Score=58.80 Aligned_cols=103 Identities=14% Similarity=0.000 Sum_probs=67.0
Q ss_pred cceEEEEccCCCccch-HHHHHHHHHHHc-CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEE
Q 035721 58 LGVLCVVHGFTGESSW-IVQLTAVLFAKS-GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~-~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~ 135 (308)
..++|+.||.|.+... -...+.+.+.+. |..+.++.. |.+ ........+.+.++.+.+.+...... ..-+.
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~-~~~s~~~~~~~Qve~vce~l~~~~~l---~~G~n 97 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNG-VGDSWLMPLTQQAEIACEKVKQMKEL---SQGYN 97 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCC-ccccceeCHHHHHHHHHHHHhhchhh---hCcEE
Confidence 3469999999876542 234566666442 677777654 332 22222234455555555555443222 23599
Q ss_pred EEEechhhHHHHHHHHhcCC--CccEEEEeCCcC
Q 035721 136 LYSESLGGAIALYITLRQKG--AWDGLILNGAMC 167 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~ 167 (308)
++|+|.||.++-.++.+.++ .|+.+|.+++.-
T Consensus 98 aIGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 99999999999999999986 599999887653
No 179
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.26 E-value=1.4e-05 Score=66.65 Aligned_cols=135 Identities=21% Similarity=0.248 Sum_probs=88.0
Q ss_pred cceeEEcC--CCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHH-------------------HHHHcCCeEE
Q 035721 32 SSEYITNS--RGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAV-------------------LFAKSGFATC 90 (308)
Q Consensus 32 ~~~~~~~~--~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~-------------------~l~~~g~~v~ 90 (308)
...++... .+..++|..+...+....+|+||++.|.+|.++ .+..+.+ .+.+ -.+++
T Consensus 12 ~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~-~an~l 89 (415)
T PF00450_consen 12 YSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSS-MWGLFGENGPFRINPDGPYTLEDNPYSWNK-FANLL 89 (415)
T ss_dssp EEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-T-HHHHHCTTSSEEEETTSTSEEEE-TT-GGG-TSEEE
T ss_pred EEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceecc-ccccccccCceEEeeccccccccccccccc-ccceE
Confidence 34455444 677999988877665567899999999998877 3322211 1112 26799
Q ss_pred EecCC-CCcCCCCccc--cCCCcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHh----c------CC
Q 035721 91 AIDHQ-GHGFSDGLVA--HIPDLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLR----Q------KG 155 (308)
Q Consensus 91 ~~d~~-G~G~s~~~~~--~~~~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~----~------p~ 155 (308)
.+|.| |.|.|..... ...+.++.++|+..+|+..-.... ...+++|.|.|+||..+-.+|.. . +-
T Consensus 90 ~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~i 169 (415)
T PF00450_consen 90 FIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKI 169 (415)
T ss_dssp EE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTS
T ss_pred EEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccc
Confidence 99955 8998876433 234678888999999987766544 55699999999999976655542 2 23
Q ss_pred CccEEEEeCCcCC
Q 035721 156 AWDGLILNGAMCG 168 (308)
Q Consensus 156 ~v~~~vl~~~~~~ 168 (308)
.++|+++.++...
T Consensus 170 nLkGi~IGng~~d 182 (415)
T PF00450_consen 170 NLKGIAIGNGWID 182 (415)
T ss_dssp EEEEEEEESE-SB
T ss_pred ccccceecCcccc
Confidence 4789999988765
No 180
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.17 E-value=2.6e-05 Score=57.16 Aligned_cols=79 Identities=11% Similarity=0.039 Sum_probs=48.9
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCe-EEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFA-TCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFL 136 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~-v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l 136 (308)
+..|||..|+|.+.. .+..+. ...++. ++++|+|..- ++. | +. ....+.|
T Consensus 11 ~~LilfF~GWg~d~~-~f~hL~---~~~~~D~l~~yDYr~l~-----------~d~---~-------~~----~y~~i~l 61 (213)
T PF04301_consen 11 KELILFFAGWGMDPS-PFSHLI---LPENYDVLICYDYRDLD-----------FDF---D-------LS----GYREIYL 61 (213)
T ss_pred CeEEEEEecCCCChH-Hhhhcc---CCCCccEEEEecCcccc-----------ccc---c-------cc----cCceEEE
Confidence 568999999998766 223321 123455 4567877211 110 1 11 2349999
Q ss_pred EEechhhHHHHHHHHhcCCCccEEEEeCCcC
Q 035721 137 YSESLGGAIALYITLRQKGAWDGLILNGAMC 167 (308)
Q Consensus 137 ~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 167 (308)
||+|||-.+|..+....| ++..|.+++..
T Consensus 62 vAWSmGVw~A~~~l~~~~--~~~aiAINGT~ 90 (213)
T PF04301_consen 62 VAWSMGVWAANRVLQGIP--FKRAIAINGTP 90 (213)
T ss_pred EEEeHHHHHHHHHhccCC--cceeEEEECCC
Confidence 999999999988876544 56666665543
No 181
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.16 E-value=1.2e-05 Score=63.61 Aligned_cols=105 Identities=16% Similarity=0.197 Sum_probs=79.2
Q ss_pred ceEEEEccCCCccchHHH------HHHHHHHHcCCeEEEecCCCCcCCCCcccc---------CCCcchHHHHHHHHHHH
Q 035721 59 GVLCVVHGFTGESSWIVQ------LTAVLFAKSGFATCAIDHQGHGFSDGLVAH---------IPDLNPVVEDAISFFDS 123 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~~------~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~---------~~~~~~~~~d~~~~l~~ 123 (308)
.+|+|.-|.-++-+++.. .+++.| +.-++..++|-+|+|-+-... ..+.++..+|...++.+
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~---~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPEL---KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhh---CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 579999998777653321 344443 567999999999998752111 12566777899999999
Q ss_pred HHHhcC-CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCc
Q 035721 124 FRARHA-PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAM 166 (308)
Q Consensus 124 ~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 166 (308)
++.+.. ...+|+++|-|+||++|..+-.++|..|.|....+++
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 987654 5679999999999999999999999988887765554
No 182
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.16 E-value=7.8e-05 Score=53.51 Aligned_cols=112 Identities=14% Similarity=0.120 Sum_probs=67.4
Q ss_pred CCcceEEEEccCCCccchHH-H--------------HHHHHHHHcCCeEEEecCCC---CcCCCC-ccccCCCcchHHHH
Q 035721 56 KTLGVLCVVHGFTGESSWIV-Q--------------LTAVLFAKSGFATCAIDHQG---HGFSDG-LVAHIPDLNPVVED 116 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~-~--------------~~~~~l~~~g~~v~~~d~~G---~G~s~~-~~~~~~~~~~~~~d 116 (308)
.++..+|+|||.|.-....| + ++++.-.+.||.|++.+.-- +-.+.. +... ...-++.
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~ky---irt~veh 175 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKY---IRTPVEH 175 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchh---ccchHHH
Confidence 45678999999875432122 1 23455556799999987431 111111 1111 1122333
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcC--CCccEEEEeCCcCCCCc
Q 035721 117 AISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQK--GAWDGLILNGAMCGISQ 171 (308)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~~~ 171 (308)
..-+...+-... ....+.++.||+||...+.+..++| ++|.++.+-+++.....
T Consensus 176 ~~yvw~~~v~pa-~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~p~ 231 (297)
T KOG3967|consen 176 AKYVWKNIVLPA-KAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGSPQ 231 (297)
T ss_pred HHHHHHHHhccc-CcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccCch
Confidence 333333332221 4558999999999999999999988 56888888777655443
No 183
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=98.15 E-value=4e-05 Score=56.96 Aligned_cols=99 Identities=19% Similarity=0.163 Sum_probs=63.8
Q ss_pred CcceEEEEccCC--CccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHH----HHHHHHHHHHHhcC-
Q 035721 57 TLGVLCVVHGFT--GESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVE----DAISFFDSFRARHA- 129 (308)
Q Consensus 57 ~~~~vv~~hG~~--~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~----d~~~~l~~~~~~~~- 129 (308)
++.+|=|+-|.. ......++.+.+.|+++||.|++.-+.- | .+-...++ .....++.+....+
T Consensus 16 P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t---------fDH~~~A~~~~~~f~~~~~~L~~~~~~ 85 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T---------FDHQAIAREVWERFERCLRALQKRGGL 85 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C---------CcHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 466777777753 3334567899999999999999987641 0 12222222 33334444443321
Q ss_pred --CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCC
Q 035721 130 --PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGA 165 (308)
Q Consensus 130 --~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 165 (308)
..-++.-+|||+|+.+-+.+...++..-++-|+++-
T Consensus 86 ~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 86 DPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred CcccCCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 224788899999999998888777655566676664
No 184
>PLN02606 palmitoyl-protein thioesterase
Probab=98.12 E-value=4.9e-05 Score=58.48 Aligned_cols=102 Identities=15% Similarity=0.132 Sum_probs=65.3
Q ss_pred cceEEEEccCCC--ccchHHHHHHHHHHHc-CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 58 LGVLCVVHGFTG--ESSWIVQLTAVLFAKS-GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 58 ~~~vv~~hG~~~--~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
..+||+.||++. +.. -+..+.+.+.+. |+.+.++. .|-+. .......+.+.++.+.+.+...... ..-+
T Consensus 26 ~~PvViwHGlgD~~~~~-~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~~~~L---~~G~ 97 (306)
T PLN02606 26 SVPFVLFHGFGGECSNG-KVSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQMKEL---SEGY 97 (306)
T ss_pred CCCEEEECCCCcccCCc-hHHHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhcchhh---cCce
Confidence 356999999983 333 446777777533 67666665 23221 1122123444555555555442222 2369
Q ss_pred EEEEechhhHHHHHHHHhcCC--CccEEEEeCCcC
Q 035721 135 FLYSESLGGAIALYITLRQKG--AWDGLILNGAMC 167 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~ 167 (308)
.++|+|.||.++-.++.+.|+ .|+.+|.+++.-
T Consensus 98 naIGfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 98 NIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred EEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 999999999999999999876 599999887653
No 185
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.09 E-value=6.2e-05 Score=64.47 Aligned_cols=107 Identities=15% Similarity=0.056 Sum_probs=61.8
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHH----------------cCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHH
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAK----------------SGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISF 120 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~----------------~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~ 120 (308)
+.-+|+|++|..|+.... +.++..... ..|+.+++|+-+- -..-+..++.+.++-+.++
T Consensus 88 sGIPVLFIPGNAGSyKQv-RSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe----~tAm~G~~l~dQtEYV~dA 162 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQV-RSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE----FTAMHGHILLDQTEYVNDA 162 (973)
T ss_pred CCceEEEecCCCCchHHH-HHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch----hhhhccHhHHHHHHHHHHH
Confidence 456899999999886633 455443331 1356667766430 0000112455555555555
Q ss_pred HHHHHHhcC--------CCCCEEEEEechhhHHHHHHHHhc---CCCccEEEEeCCcCC
Q 035721 121 FDSFRARHA--------PDLPAFLYSESLGGAIALYITLRQ---KGAWDGLILNGAMCG 168 (308)
Q Consensus 121 l~~~~~~~~--------~~~~~~l~G~S~Gg~~a~~~a~~~---p~~v~~~vl~~~~~~ 168 (308)
|..+...+. .+..|+++||||||.+|...+..- ++.|.-++..+++..
T Consensus 163 Ik~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 163 IKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHA 221 (973)
T ss_pred HHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCccc
Confidence 555433221 255699999999999987666532 344666666665433
No 186
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.03 E-value=0.00023 Score=53.19 Aligned_cols=101 Identities=17% Similarity=0.082 Sum_probs=63.7
Q ss_pred ceEEEEccCCCccch-HHHHHHHHHHHc-CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEE
Q 035721 59 GVLCVVHGFTGESSW-IVQLTAVLFAKS-GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFL 136 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~-~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l 136 (308)
.++|++||++..... ....+.+.+.+. |..|++.|. |-| -.........+.++.+.+.+..... -.+-+.+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g---~~~s~l~pl~~Qv~~~ce~v~~m~~---lsqGyni 96 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG---IKDSSLMPLWEQVDVACEKVKQMPE---LSQGYNI 96 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC---cchhhhccHHHHHHHHHHHHhcchh---ccCceEE
Confidence 468999999987652 245677777665 889999986 333 0011111233333333333332222 3447899
Q ss_pred EEechhhHHHHHHHHhcCC-CccEEEEeCCc
Q 035721 137 YSESLGGAIALYITLRQKG-AWDGLILNGAM 166 (308)
Q Consensus 137 ~G~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~ 166 (308)
+|.|.||.++-.++..-++ .|+..|-++++
T Consensus 97 vg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 97 VGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred EEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 9999999999888887553 58888877654
No 187
>COG0627 Predicted esterase [General function prediction only]
Probab=98.01 E-value=2.4e-05 Score=61.47 Aligned_cols=113 Identities=17% Similarity=0.178 Sum_probs=69.9
Q ss_pred CCcceEEEEccCCCccc--hHHHHHHHHHHHcCCeEEEecCC--------------CCcCCCCc---c---cc-CCCcch
Q 035721 56 KTLGVLCVVHGFTGESS--WIVQLTAVLFAKSGFATCAIDHQ--------------GHGFSDGL---V---AH-IPDLNP 112 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~--------------G~G~s~~~---~---~~-~~~~~~ 112 (308)
.+-|+++++||..++.. .....+-+.....|+.++++|-. |-+.|-.. . .. .+.+++
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~t 131 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWET 131 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhH
Confidence 45789999999988743 12234555555668888887432 22222110 0 00 123333
Q ss_pred H-HHHHHHHHHHHHHhcCCC--CCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCC
Q 035721 113 V-VEDAISFFDSFRARHAPD--LPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGIS 170 (308)
Q Consensus 113 ~-~~d~~~~l~~~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 170 (308)
+ .+++-+.++..... .. .+..++||||||.-|+.+|.++|++++.+...++.....
T Consensus 132 fl~~ELP~~~~~~f~~--~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 132 FLTQELPALWEAAFPA--DGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HHHhhhhHHHHHhcCc--ccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 2 23444333322221 22 278999999999999999999999999999988876654
No 188
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.97 E-value=0.00036 Score=52.61 Aligned_cols=39 Identities=18% Similarity=0.162 Sum_probs=35.6
Q ss_pred CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 130 PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 130 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
+.++..++|||+||.+++.....+|+.+...++++|...
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 666899999999999999999999999999999999644
No 189
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.97 E-value=1.8e-05 Score=45.67 Aligned_cols=50 Identities=18% Similarity=0.159 Sum_probs=30.5
Q ss_pred cccccccccceeEEcCCCcEEEEEEecCCC----CCCCcceEEEEccCCCccch
Q 035721 24 YARHSVSHSSEYITNSRGLRLFTQWWTPLP----PAKTLGVLCVVHGFTGESSW 73 (308)
Q Consensus 24 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~----~~~~~~~vv~~hG~~~~~~~ 73 (308)
....+++.++..+++.||.-|......+.. ...++|+|++.||+.+++..
T Consensus 5 i~~~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~ 58 (63)
T PF04083_consen 5 IEKHGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDD 58 (63)
T ss_dssp HHHTT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGG
T ss_pred HHHcCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHH
Confidence 345688899999999999999887766544 34568999999999988873
No 190
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.94 E-value=2.5e-05 Score=50.80 Aligned_cols=52 Identities=19% Similarity=0.183 Sum_probs=44.0
Q ss_pred CcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc-CCchhhHHH
Q 035721 250 EVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI-GEPEENVEL 303 (308)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~ 303 (308)
..|+|++.++.|+++|.+.++.+.+.+ ++++++.+++.||..+ ..-.-+.+.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l--~~s~lvt~~g~gHg~~~~~s~C~~~~ 86 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL--PGSRLVTVDGAGHGVYAGGSPCVDKA 86 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC--CCceEEEEeccCcceecCCChHHHHH
Confidence 589999999999999999999999999 5689999999999988 433333333
No 191
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.87 E-value=0.00015 Score=59.11 Aligned_cols=111 Identities=14% Similarity=0.078 Sum_probs=82.4
Q ss_pred cceEEEEccCCCccchH----HHHHHHHHHHcCCeEEEecCCCCcCCCCcccc------CCCcchHHHHHHHHHHHHHHh
Q 035721 58 LGVLCVVHGFTGESSWI----VQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH------IPDLNPVVEDAISFFDSFRAR 127 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~----~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~------~~~~~~~~~d~~~~l~~~~~~ 127 (308)
.|..|+|-|=+.....+ -..+...-.+.|-.|+..++|=+|.|.+.... ..+..+...|+..+|+.+..+
T Consensus 86 gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k 165 (514)
T KOG2182|consen 86 GPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAK 165 (514)
T ss_pred CceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhh
Confidence 67777777754433211 01233333445889999999999988653321 135677789999999999988
Q ss_pred cC--CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 128 HA--PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 128 ~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
.. ++.|.+.+|-|+-|.++..+-.++|+.+.|.|..+++..
T Consensus 166 ~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 166 FNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred cCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 76 456999999999999999999999999999998777543
No 192
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.86 E-value=0.0006 Score=54.69 Aligned_cols=137 Identities=13% Similarity=0.074 Sum_probs=81.4
Q ss_pred CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhhCCCcccccCCCCCCCccccc
Q 035721 130 PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWLVPTWRVVPTRGSLPMVSFKE 209 (308)
Q Consensus 130 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (308)
.-++++|.|.|==|..++..|.. .+||++++-+.-... .....+......+-..+......
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~-D~RV~aivP~Vid~L--------N~~~~l~h~y~~yG~~ws~a~~d---------- 230 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAV-DPRVKAIVPIVIDVL--------NMKANLEHQYRSYGGNWSFAFQD---------- 230 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhcc-CcceeEEeeEEEccC--------CcHHHHHHHHHHhCCCCccchhh----------
Confidence 56699999999999999999984 468998884332110 01111111111111122211110
Q ss_pred HHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCC
Q 035721 210 EWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGM 289 (308)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (308)
.+..........+.......+ .|......++++|.++|.|..|++..++...-+.+.+++ ...+..+|++
T Consensus 231 -----Y~~~gi~~~l~tp~f~~L~~i----vDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G-~K~lr~vPN~ 300 (367)
T PF10142_consen 231 -----YYNEGITQQLDTPEFDKLMQI----VDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPG-EKYLRYVPNA 300 (367)
T ss_pred -----hhHhCchhhcCCHHHHHHHHh----cCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCC-CeeEEeCCCC
Confidence 000111111111222222222 122233356689999999999999999999999999986 5799999999
Q ss_pred cccccC
Q 035721 290 WHQLIG 295 (308)
Q Consensus 290 gH~~~~ 295 (308)
+|....
T Consensus 301 ~H~~~~ 306 (367)
T PF10142_consen 301 GHSLIG 306 (367)
T ss_pred Ccccch
Confidence 998874
No 193
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.81 E-value=0.00071 Score=56.12 Aligned_cols=137 Identities=17% Similarity=0.163 Sum_probs=83.5
Q ss_pred cceeEEcC--CCcEEEEEEecCCCCCCCcceEEEEccCCCccchH--HHHHHH-------------HHHH------cCCe
Q 035721 32 SSEYITNS--RGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWI--VQLTAV-------------LFAK------SGFA 88 (308)
Q Consensus 32 ~~~~~~~~--~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~--~~~~~~-------------~l~~------~g~~ 88 (308)
...++... .+..++|..+.........|+|+++.|.+|.+... +....+ .|.. +-..
T Consensus 38 ~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~an 117 (433)
T PLN03016 38 ETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMAN 117 (433)
T ss_pred EEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCc
Confidence 34455443 35678887776655545689999999998876521 111111 1111 1257
Q ss_pred EEEec-CCCCcCCCCccccCCC-cchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHh----c------C
Q 035721 89 TCAID-HQGHGFSDGLVAHIPD-LNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLR----Q------K 154 (308)
Q Consensus 89 v~~~d-~~G~G~s~~~~~~~~~-~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~----~------p 154 (308)
++-+| .-|.|.|......... -.+.++++..+++..-.... ...+++|.|.|+||..+-.+|.. . +
T Consensus 118 llfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~ 197 (433)
T PLN03016 118 IIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPP 197 (433)
T ss_pred EEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCc
Confidence 89999 5589998653322112 12334677777665543322 45689999999999866655543 1 1
Q ss_pred CCccEEEEeCCcCC
Q 035721 155 GAWDGLILNGAMCG 168 (308)
Q Consensus 155 ~~v~~~vl~~~~~~ 168 (308)
-.++|+++-++...
T Consensus 198 inLkGi~iGNg~t~ 211 (433)
T PLN03016 198 INLQGYMLGNPVTY 211 (433)
T ss_pred ccceeeEecCCCcC
Confidence 25789998887654
No 194
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.81 E-value=0.00068 Score=51.95 Aligned_cols=109 Identities=17% Similarity=0.097 Sum_probs=61.5
Q ss_pred CCcceEEEEccCCCccc-hHHHHHHHHHHHcC----CeEEEecCCCCcCCCCccccCCCcchHHHHHH-HHHHHHHHhcC
Q 035721 56 KTLGVLCVVHGFTGESS-WIVQLTAVLFAKSG----FATCAIDHQGHGFSDGLVAHIPDLNPVVEDAI-SFFDSFRARHA 129 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g----~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~-~~l~~~~~~~~ 129 (308)
.+.|++++.||-..... ..+ .+.+.|...| -.++.+|.-- ........+..+++.+.+. +++=++...+.
T Consensus 96 ~k~pvl~~~DG~~~~~~g~i~-~~~dsli~~g~i~pai~vgid~~d---~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp 171 (299)
T COG2382 96 EKYPVLYLQDGQDWFRSGRIP-RILDSLIAAGEIPPAILVGIDYID---VKKRREELHCNEAYWRFLAQELLPYVEERYP 171 (299)
T ss_pred ccccEEEEeccHHHHhcCChH-HHHHHHHHcCCCCCceEEecCCCC---HHHHHHHhcccHHHHHHHHHHhhhhhhccCc
Confidence 35789999998532211 122 3344444433 3466666432 0001111112222222221 22223333322
Q ss_pred ---CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 130 ---PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 130 ---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
....-+|.|.|+||.+++..+..+|+++..++..+|...
T Consensus 172 ~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 172 TSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred ccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 455678999999999999999999999999999888644
No 195
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.76 E-value=9e-05 Score=52.38 Aligned_cols=55 Identities=24% Similarity=0.267 Sum_probs=39.0
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC----CccEEEEeCCcC
Q 035721 112 PVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG----AWDGLILNGAMC 167 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~ 167 (308)
.....+...++...... +..+++++|||+||.+|..++..... +...++.++++.
T Consensus 9 ~~~~~i~~~~~~~~~~~-p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 9 SLANLVLPLLKSALAQY-PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHC-CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 34455666666555432 55699999999999999998887654 466677777653
No 196
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.67 E-value=0.0026 Score=45.58 Aligned_cols=111 Identities=17% Similarity=0.143 Sum_probs=66.9
Q ss_pred CCcceEEEEccCCCccchHHH-------HHHH----HHHH--cCCeEEEecCCCCcCCCC-ccc--cCCCcchHHHHHHH
Q 035721 56 KTLGVLCVVHGFTGESSWIVQ-------LTAV----LFAK--SGFATCAIDHQGHGFSDG-LVA--HIPDLNPVVEDAIS 119 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~-------~~~~----~l~~--~g~~v~~~d~~G~G~s~~-~~~--~~~~~~~~~~d~~~ 119 (308)
....+.++++|.+.+...... .+.+ .+.. .+-.|-++-+.|+-.-.. ... ....-+.-+.++..
T Consensus 17 ~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~~ 96 (177)
T PF06259_consen 17 TADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLAR 96 (177)
T ss_pred CcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHHH
Confidence 346789999998876542211 1111 1111 123454544444432211 000 00123445667888
Q ss_pred HHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCc
Q 035721 120 FFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAM 166 (308)
Q Consensus 120 ~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 166 (308)
+++.|.....+..++.++|||+|+.++-..+...+..+..+|+++++
T Consensus 97 f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 97 FLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 88877665335668999999999999988888767789999998875
No 197
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.62 E-value=0.00016 Score=60.75 Aligned_cols=91 Identities=10% Similarity=0.032 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHcCCeEEEecCCCCcCCCCcc-ccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh
Q 035721 74 IVQLTAVLFAKSGFATCAIDHQGHGFSDGLV-AHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 74 ~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
.|..+++.|.+.||. -.++.|...--... ......+++...+...|+.+.... ++.+++|+||||||.+++.+...
T Consensus 157 vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~n-ggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATN-GGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred eHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHc-CCCeEEEEEeCCchHHHHHHHHh
Confidence 568999999999997 34444322111110 001123556677888888776542 46799999999999999988763
Q ss_pred cC---------------CCccEEEEeCCcC
Q 035721 153 QK---------------GAWDGLILNGAMC 167 (308)
Q Consensus 153 ~p---------------~~v~~~vl~~~~~ 167 (308)
-. ..|++.|.++++.
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheeccccc
Confidence 21 2378888888754
No 198
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.54 E-value=0.0028 Score=48.23 Aligned_cols=107 Identities=13% Similarity=0.071 Sum_probs=76.4
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEE
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~ 135 (308)
.+.|.|+++-...|+.....+...+.|... ..|+..|+-.--.-+-..+. ++++++++.+.+.++.++. .++
T Consensus 101 ~pdPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~G~-FdldDYIdyvie~~~~~Gp------~~h 172 (415)
T COG4553 101 KPDPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEAGH-FDLDDYIDYVIEMINFLGP------DAH 172 (415)
T ss_pred CCCCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeecccCC-ccHHHHHHHHHHHHHHhCC------CCc
Confidence 456789998888888765667778888775 78999998754333333333 5889999999999988875 567
Q ss_pred EEEechhhH-----HHHHHHHhcCCCccEEEEeCCcCCCC
Q 035721 136 LYSESLGGA-----IALYITLRQKGAWDGLILNGAMCGIS 170 (308)
Q Consensus 136 l~G~S~Gg~-----~a~~~a~~~p~~v~~~vl~~~~~~~~ 170 (308)
+++.|.-+. +++..+...|....+.++++++....
T Consensus 173 v~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR 212 (415)
T COG4553 173 VMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDAR 212 (415)
T ss_pred EEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCccccc
Confidence 777776544 44444455677788999998876543
No 199
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.50 E-value=0.00037 Score=56.58 Aligned_cols=86 Identities=15% Similarity=0.154 Sum_probs=60.6
Q ss_pred hHHHHHHHHHHHcCCe------EEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHH
Q 035721 73 WIVQLTAVLFAKSGFA------TCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIA 146 (308)
Q Consensus 73 ~~~~~~~~~l~~~g~~------v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a 146 (308)
++|..+++.|..-||. -..+|+|= |.... ...+++...+...++...... +..|++|++||||+.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~~~---e~rd~yl~kLK~~iE~~~~~~-G~kkVvlisHSMG~l~~ 196 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL---SYHNS---EERDQYLSKLKKKIETMYKLN-GGKKVVLISHSMGGLYV 196 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh---ccCCh---hHHHHHHHHHHHHHHHHHHHc-CCCceEEEecCCccHHH
Confidence 4788899999988887 34567762 11111 134556677777777776663 45899999999999999
Q ss_pred HHHHHhcCC--------CccEEEEeCC
Q 035721 147 LYITLRQKG--------AWDGLILNGA 165 (308)
Q Consensus 147 ~~~a~~~p~--------~v~~~vl~~~ 165 (308)
+.+....++ .+++.+.+++
T Consensus 197 lyFl~w~~~~~~~W~~k~I~sfvnig~ 223 (473)
T KOG2369|consen 197 LYFLKWVEAEGPAWCDKYIKSFVNIGA 223 (473)
T ss_pred HHHHhcccccchhHHHHHHHHHHccCc
Confidence 999988876 2555555554
No 200
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.44 E-value=0.0011 Score=50.45 Aligned_cols=56 Identities=18% Similarity=0.249 Sum_probs=35.6
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcC-----CCccEEEEeCCc
Q 035721 110 LNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQK-----GAWDGLILNGAM 166 (308)
Q Consensus 110 ~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-----~~v~~~vl~~~~ 166 (308)
+.....++...++.+..+. +..++++.|||+||.+|..++.... ..+..+..-+|.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~-p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~ 167 (229)
T cd00519 107 YKSLYNQVLPELKSALKQY-PDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPR 167 (229)
T ss_pred HHHHHHHHHHHHHHHHhhC-CCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCC
Confidence 3344455555555554433 5568999999999999998877532 335544444443
No 201
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=97.42 E-value=0.0042 Score=51.44 Aligned_cols=138 Identities=17% Similarity=0.178 Sum_probs=88.8
Q ss_pred ccccceeEEcC--CCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHH----H-c-------------CCe
Q 035721 29 VSHSSEYITNS--RGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFA----K-S-------------GFA 88 (308)
Q Consensus 29 ~~~~~~~~~~~--~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~----~-~-------------g~~ 88 (308)
+.....++... .|..++|..+........+|.||.+.|.+|.+... .+...+- . . -..
T Consensus 42 f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~--G~~~E~GPf~v~~~G~tL~~N~ySWnk~aN 119 (454)
T KOG1282|consen 42 FKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG--GLFEENGPFRVKYNGKTLYLNPYSWNKEAN 119 (454)
T ss_pred cccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh--hhhhhcCCeEEcCCCCcceeCCcccccccc
Confidence 34445566544 58899998887766546689999999999887622 2211110 0 1 135
Q ss_pred EEEecCC-CCcCCCCcccc--CCCcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHh----cC-----
Q 035721 89 TCAIDHQ-GHGFSDGLVAH--IPDLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLR----QK----- 154 (308)
Q Consensus 89 v~~~d~~-G~G~s~~~~~~--~~~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~----~p----- 154 (308)
++-+|.| |.|.|-..... ..+-+..++|...+|...-.+.. ..+++.|.|-|++|...-.+|.. ..
T Consensus 120 iLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~ 199 (454)
T KOG1282|consen 120 ILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKP 199 (454)
T ss_pred EEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCC
Confidence 7888877 77777543321 12445567787777765544433 67799999999999766555542 21
Q ss_pred -CCccEEEEeCCcCC
Q 035721 155 -GAWDGLILNGAMCG 168 (308)
Q Consensus 155 -~~v~~~vl~~~~~~ 168 (308)
-.++|+++-+|...
T Consensus 200 ~iNLkG~~IGNg~td 214 (454)
T KOG1282|consen 200 NINLKGYAIGNGLTD 214 (454)
T ss_pred cccceEEEecCcccC
Confidence 24788888777655
No 202
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.40 E-value=0.00045 Score=49.98 Aligned_cols=78 Identities=13% Similarity=0.090 Sum_probs=48.3
Q ss_pred CeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh------cCCCccEE
Q 035721 87 FATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR------QKGAWDGL 160 (308)
Q Consensus 87 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~------~p~~v~~~ 160 (308)
..+..+++|-..... .+..+...-+.++...++....+. +..+++|+|+|.|+.++..++.. ..++|.++
T Consensus 40 ~~~~~V~YpA~~~~~---~y~~S~~~G~~~~~~~i~~~~~~C-P~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~av 115 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN---SYGDSVAAGVANLVRLIEEYAARC-PNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAV 115 (179)
T ss_dssp EEEEE--S---SCGG---SCHHHHHHHHHHHHHHHHHHHHHS-TTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEE
T ss_pred eEEEecCCCCCCCcc---cccccHHHHHHHHHHHHHHHHHhC-CCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEE
Confidence 445666676432211 111244455667777777666553 56799999999999999998877 22578999
Q ss_pred EEeCCcCC
Q 035721 161 ILNGAMCG 168 (308)
Q Consensus 161 vl~~~~~~ 168 (308)
++++-+..
T Consensus 116 vlfGdP~~ 123 (179)
T PF01083_consen 116 VLFGDPRR 123 (179)
T ss_dssp EEES-TTT
T ss_pred EEecCCcc
Confidence 99886543
No 203
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=97.40 E-value=0.0016 Score=53.68 Aligned_cols=121 Identities=22% Similarity=0.179 Sum_probs=77.1
Q ss_pred EEEecCCCCCCCcceEEEEccCCCccchHHHHHHHH-------------------HHHcCCeEEEec-CCCCcCCCC-cc
Q 035721 46 TQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVL-------------------FAKSGFATCAID-HQGHGFSDG-LV 104 (308)
Q Consensus 46 ~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~-------------------l~~~g~~v~~~d-~~G~G~s~~-~~ 104 (308)
++.+.+.++..++|.++++.|.+|.+. .+-.+.+. +.+ .-.++.+| .-|.|.|.. ..
T Consensus 89 fy~fe~~ndp~~rPvi~wlNGGPGcSS-~~g~l~elGP~rI~~~~~P~~~~NP~SW~~-~adLvFiDqPvGTGfS~a~~~ 166 (498)
T COG2939 89 FYTFESPNDPANRPVIFWLNGGPGCSS-VTGLLGELGPKRIQSGTSPSYPDNPGSWLD-FADLVFIDQPVGTGFSRALGD 166 (498)
T ss_pred EEEecCCCCCCCCceEEEecCCCChHh-hhhhhhhcCCeeeeCCCCCCCCCCcccccc-CCceEEEecCcccCccccccc
Confidence 333444344356899999999998877 32333110 111 13689999 558898875 22
Q ss_pred ccCCCcchHHHHHHHHHHHHHHhcC----CCCCEEEEEechhhHHHHHHHHhcCC---CccEEEEeCCcCC
Q 035721 105 AHIPDLNPVVEDAISFFDSFRARHA----PDLPAFLYSESLGGAIALYITLRQKG---AWDGLILNGAMCG 168 (308)
Q Consensus 105 ~~~~~~~~~~~d~~~~l~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~ 168 (308)
....++....+|+..+++.+..... ...+.+|+|-|+||.-+..+|..-.+ ..++++++++...
T Consensus 167 e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvli 237 (498)
T COG2939 167 EKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLI 237 (498)
T ss_pred ccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeee
Confidence 3334666677788777776654321 34589999999999988777765443 3567776665443
No 204
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.32 E-value=0.00082 Score=46.67 Aligned_cols=39 Identities=21% Similarity=0.382 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh
Q 035721 113 VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
+.+.+.+.++.+..+. +..++++.|||+||.+|..++..
T Consensus 46 ~~~~~~~~l~~~~~~~-~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 46 LYDQILDALKELVEKY-PDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHHS-TTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc-cCccchhhccchHHHHHHHHHHh
Confidence 3445555555555443 44689999999999999888775
No 205
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.26 E-value=0.016 Score=46.27 Aligned_cols=234 Identities=12% Similarity=0.030 Sum_probs=112.0
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
..+||++=|+.+..+.+.........+.||.++.+-.|-+-..-.......+......-+.+++..... +..++++-
T Consensus 38 ~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~---~~~pi~fh 114 (350)
T KOG2521|consen 38 EKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNS---DPCPIIFH 114 (350)
T ss_pred cccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccC---CcCceEEE
Confidence 434555555555555455677777888899999988876543332222212333333444444443331 55688888
Q ss_pred EechhhHHHHHHH---Hh-c-C---CCccEEEEeCCcCCCCcCCCCCch--hhhhHHHhhhhCCC-cccccCCCCCCCcc
Q 035721 138 SESLGGAIALYIT---LR-Q-K---GAWDGLILNGAMCGISQKFKPPWP--LEHLLFTVAWLVPT-WRVVPTRGSLPMVS 206 (308)
Q Consensus 138 G~S~Gg~~a~~~a---~~-~-p---~~v~~~vl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 206 (308)
-+|+||...+... .. . | +.+.+++..+.+............ ..........+... ....... +....
T Consensus 115 ~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~ 192 (350)
T KOG2521|consen 115 VFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLNYHITLLT--MAGNE 192 (350)
T ss_pred EecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcCeEEEEEE--eeecc
Confidence 9999998654332 21 2 2 345666666554332211110000 00000000000000 0000000 00000
Q ss_pred cccHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCC--CCcEE
Q 035721 207 FKEEWKRKLALSSPRRPVARPRAATALELLRVSRDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASK--DKTLS 284 (308)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~ 284 (308)
............... .. ...+. ..+...-.....+.+.+.+..|.++|.+..+++.+..... +++.+
T Consensus 193 ~~~~~~~~~~~~~~~------~r--~~~~~---~r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~ 261 (350)
T KOG2521|consen 193 GGAYLLGPLAEKISM------SR--KYHFL---DRYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSV 261 (350)
T ss_pred cchhhhhhhhhcccc------cc--chHHH---HHHHhhhhcccccceeecCCccccccHHHHHHHHHHHHhcCceEEEe
Confidence 000000000000000 00 00000 1112222233567888999999999999988886655433 45555
Q ss_pred EecCCccccc--CCchhhHHHhhhc
Q 035721 285 IYPGMWHQLI--GEPEENVELVFGE 307 (308)
Q Consensus 285 ~~~~~gH~~~--~~~~~~~~~i~~~ 307 (308)
-+.++-|..+ ..|..+.++..++
T Consensus 262 ~~~ds~H~~h~r~~p~~y~~~~~~F 286 (350)
T KOG2521|consen 262 KFKDSEHVAHFRSFPKTYLKKCSEF 286 (350)
T ss_pred eccCccceeeeccCcHHHHHHHHHH
Confidence 5678899888 7888877776654
No 206
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.18 E-value=0.0013 Score=49.35 Aligned_cols=49 Identities=12% Similarity=0.186 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc----CCCccEEEEeCCc
Q 035721 116 DAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ----KGAWDGLILNGAM 166 (308)
Q Consensus 116 d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~----p~~v~~~vl~~~~ 166 (308)
...+.++.+... .+.++.+.|||.||.+|..++... .++|.++...+++
T Consensus 70 ~A~~yl~~~~~~--~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 70 SALAYLKKIAKK--YPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHHHHh--CCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 334455555444 344799999999999999988874 3578888887775
No 207
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.08 E-value=0.0035 Score=54.41 Aligned_cols=119 Identities=16% Similarity=0.166 Sum_probs=67.5
Q ss_pred EEEEEEecCCCCCCC-cceEEEEccCCCccch---H-HHHHHHHHHHcCCeEEEecCC----CCcCCCC--ccccCCCcc
Q 035721 43 RLFTQWWTPLPPAKT-LGVLCVVHGFTGESSW---I-VQLTAVLFAKSGFATCAIDHQ----GHGFSDG--LVAHIPDLN 111 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~-~~~vv~~hG~~~~~~~---~-~~~~~~~l~~~g~~v~~~d~~----G~G~s~~--~~~~~~~~~ 111 (308)
-|+..++.|...... .|++|++||.+..... + .......+..+...|+.+.+| |+..... .++. ..
T Consensus 96 CLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN-~g-- 172 (545)
T KOG1516|consen 96 CLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGN-LG-- 172 (545)
T ss_pred CceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCc-cc--
Confidence 355556767665222 7999999998643321 1 112222333335677888877 2222211 1111 12
Q ss_pred hHHHHHHHHHHHHHHh---cC-CCCCEEEEEechhhHHHHHHHHhc--CCCccEEEEeCCc
Q 035721 112 PVVEDAISFFDSFRAR---HA-PDLPAFLYSESLGGAIALYITLRQ--KGAWDGLILNGAM 166 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~---~~-~~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~ 166 (308)
..|...++++++.. .+ ++.+|.++|||.||..+..+...- ...+..+|..++.
T Consensus 173 --l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 173 --LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred --HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 23666666666543 22 888999999999999887665421 1345666665554
No 208
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.97 E-value=0.0021 Score=47.03 Aligned_cols=75 Identities=17% Similarity=0.087 Sum_probs=46.7
Q ss_pred HHHHHHHcCCeEEEecCCCCcCCCCc----cccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc
Q 035721 78 TAVLFAKSGFATCAIDHQGHGFSDGL----VAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 78 ~~~~l~~~g~~v~~~d~~G~G~s~~~----~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
.+..|... .+|+++-+|=....... .......+-...|+.++.++.....+++.+++|+|||.|+.+..++..++
T Consensus 38 qas~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 38 QASAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HhhhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 34445444 67888887732211111 00001222334677777776665544677999999999999999998875
No 209
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.87 E-value=0.0072 Score=42.17 Aligned_cols=37 Identities=14% Similarity=0.131 Sum_probs=33.2
Q ss_pred CCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 132 LPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 132 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
...++-|.||||..|..+.-++|+.+.++|.+++...
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred CCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 3678889999999999999999999999999988654
No 210
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=96.83 E-value=0.024 Score=47.96 Aligned_cols=126 Identities=18% Similarity=0.187 Sum_probs=75.3
Q ss_pred cCCCc--EEEEEEecCCCCCCCcceEEEEccCCCccchHHHH----HHHHHHHcCCeEEEecCCCCcCCCCc--cccCCC
Q 035721 38 NSRGL--RLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQL----TAVLFAKSGFATCAIDHQGHGFSDGL--VAHIPD 109 (308)
Q Consensus 38 ~~~g~--~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~----~~~~l~~~g~~v~~~d~~G~G~s~~~--~~~~~~ 109 (308)
..++. .|.+.+|.|..= ..-++.+-|.+......+.. +...+ .+||.++.-| -||..+... .....+
T Consensus 9 ~~~~~~~~i~fev~LP~~W---NgR~~~~GgGG~~G~i~~~~~~~~~~~~~-~~G~A~~~TD-~Gh~~~~~~~~~~~~~n 83 (474)
T PF07519_consen 9 PSDGSAPNIRFEVWLPDNW---NGRFLQVGGGGFAGGINYADGKASMATAL-ARGYATASTD-SGHQGSAGSDDASFGNN 83 (474)
T ss_pred cCCCCcceEEEEEECChhh---ccCeEEECCCeeeCcccccccccccchhh-hcCeEEEEec-CCCCCCcccccccccCC
Confidence 34444 888999988732 22355555544433322222 33444 5699999999 466555331 111111
Q ss_pred cchHH-------HHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 110 LNPVV-------EDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 110 ~~~~~-------~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
.+.+. .+...+-+.+-..+. .+..-...|.|.||.-++..|+++|+.+++|+.-+|...
T Consensus 84 ~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 84 PEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHH
Confidence 11111 111111122222221 677889999999999999999999999999999999765
No 211
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.82 E-value=0.014 Score=40.33 Aligned_cols=77 Identities=16% Similarity=0.119 Sum_probs=48.1
Q ss_pred ceEEEEccCCCccchHHHHHHHHHHHcCCe-EEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 59 GVLCVVHGFTGESSWIVQLTAVLFAKSGFA-TCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~-v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
..||+.-|++..++ ....+ ....++. ++++|++.... ++ |..+. + .+.++
T Consensus 12 ~LIvyFaGwgtpps-~v~HL---ilpeN~dl~lcYDY~dl~l---------df-----DfsAy------~-----hirlv 62 (214)
T COG2830 12 HLIVYFAGWGTPPS-AVNHL---ILPENHDLLLCYDYQDLNL---------DF-----DFSAY------R-----HIRLV 62 (214)
T ss_pred EEEEEEecCCCCHH-HHhhc---cCCCCCcEEEEeehhhcCc---------cc-----chhhh------h-----hhhhh
Confidence 47888899887765 22222 2334454 67788864321 11 11111 1 56789
Q ss_pred EechhhHHHHHHHHhcCCCccEEEEeCCc
Q 035721 138 SESLGGAIALYITLRQKGAWDGLILNGAM 166 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 166 (308)
++|||-.+|-++.+..+ +++.+.+++.
T Consensus 63 AwSMGVwvAeR~lqg~~--lksatAiNGT 89 (214)
T COG2830 63 AWSMGVWVAERVLQGIR--LKSATAINGT 89 (214)
T ss_pred hhhHHHHHHHHHHhhcc--ccceeeecCC
Confidence 99999999999988765 6666666653
No 212
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=96.78 E-value=0.015 Score=48.83 Aligned_cols=112 Identities=17% Similarity=0.142 Sum_probs=63.1
Q ss_pred EEEEecCCCCCCCcceEEEEccCCCcc------chHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHH
Q 035721 45 FTQWWTPLPPAKTLGVLCVVHGFTGES------SWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAI 118 (308)
Q Consensus 45 ~~~~~~~~~~~~~~~~vv~~hG~~~~~------~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~ 118 (308)
.|+.|.++.+ +++-.|+-+||.|.-. +.|.+.++..| |..|+.+|+----+ .. +....+++.
T Consensus 384 ~~~~wh~P~p-~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLAPE-----aP---FPRaleEv~ 451 (880)
T KOG4388|consen 384 SLELWHRPAP-RSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLAPE-----AP---FPRALEEVF 451 (880)
T ss_pred ccccCCCCCC-CCceEEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccCCC-----CC---CCcHHHHHH
Confidence 3555555433 4566788899987422 23455555554 79999999842222 11 222223332
Q ss_pred HHHHHHHHh----cCCCCCEEEEEechhhHHHHHHHHh----cCCCccEEEEeCCcCC
Q 035721 119 SFFDSFRAR----HAPDLPAFLYSESLGGAIALYITLR----QKGAWDGLILNGAMCG 168 (308)
Q Consensus 119 ~~l~~~~~~----~~~~~~~~l~G~S~Gg~~a~~~a~~----~p~~v~~~vl~~~~~~ 168 (308)
-+.-++... ..-+++|+++|-|.||.+.+..+.+ .-...+|+++.-++.-
T Consensus 452 fAYcW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl 509 (880)
T KOG4388|consen 452 FAYCWAINNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTL 509 (880)
T ss_pred HHHHHHhcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChhh
Confidence 222222211 1167799999999999965544433 2223468888766543
No 213
>PLN02454 triacylglycerol lipase
Probab=96.69 E-value=0.0073 Score=49.15 Aligned_cols=40 Identities=18% Similarity=0.224 Sum_probs=29.7
Q ss_pred hHHHHHHHHHHHHHHhcCCCC--CEEEEEechhhHHHHHHHHh
Q 035721 112 PVVEDAISFFDSFRARHAPDL--PAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~ 152 (308)
...+++...++.+...+ +.. ++++.|||+||.+|+.+|..
T Consensus 207 S~r~qvl~~V~~l~~~Y-p~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 207 SARSQLLAKIKELLERY-KDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHHhC-CCCCceEEEEecCHHHHHHHHHHHH
Confidence 35566777777776654 333 49999999999999988854
No 214
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=96.55 E-value=0.0038 Score=50.19 Aligned_cols=107 Identities=16% Similarity=0.053 Sum_probs=82.7
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc--CCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH--IPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~--~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
.+|+|+..-|++.............|. -+-+.+++|-++.|.+.+.. .-++.+.+.|...+++.++.- -+.+.
T Consensus 62 drPtV~~T~GY~~~~~p~r~Ept~Lld---~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~i--Y~~kW 136 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTSPRRSEPTQLLD---GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPI--YPGKW 136 (448)
T ss_pred CCCeEEEecCcccccCccccchhHhhc---cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhh--ccCCc
Confidence 478999999988754422234444442 45789999999999875542 136788899999999999876 35589
Q ss_pred EEEEechhhHHHHHHHHhcCCCccEEEEeCCcCC
Q 035721 135 FLYSESLGGAIALYITLRQKGAWDGLILNGAMCG 168 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 168 (308)
+--|-|=||+.++.+-.-+|+-|++.|...++..
T Consensus 137 ISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 137 ISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred eecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 9999999999999999999999999997655443
No 215
>PLN02162 triacylglycerol lipase
Probab=96.50 E-value=0.01 Score=48.88 Aligned_cols=35 Identities=29% Similarity=0.344 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHH
Q 035721 116 DAISFFDSFRARHAPDLPAFLYSESLGGAIALYITL 151 (308)
Q Consensus 116 d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 151 (308)
.+.+.++.+..+. +..++++.|||+||.+|..++.
T Consensus 263 ~I~~~L~~lL~k~-p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARN-KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhC-CCceEEEEecChHHHHHHHHHH
Confidence 3444444333332 5568999999999999998764
No 216
>PLN00413 triacylglycerol lipase
Probab=96.26 E-value=0.017 Score=47.71 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=24.0
Q ss_pred HHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHH
Q 035721 117 AISFFDSFRARHAPDLPAFLYSESLGGAIALYITL 151 (308)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 151 (308)
+...++.+.... +..++++.|||+||.+|..++.
T Consensus 270 i~~~Lk~ll~~~-p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 270 ILRHLKEIFDQN-PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHC-CCCeEEEEecCHHHHHHHHHHH
Confidence 334444443333 5568999999999999998874
No 217
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=96.22 E-value=0.036 Score=44.42 Aligned_cols=83 Identities=18% Similarity=0.230 Sum_probs=55.5
Q ss_pred CeEEEecCC-CCcCCCCccccCC-CcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHhc---------
Q 035721 87 FATCAIDHQ-GHGFSDGLVAHIP-DLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLRQ--------- 153 (308)
Q Consensus 87 ~~v~~~d~~-G~G~s~~~~~~~~-~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~--------- 153 (308)
..++-+|.| |.|.|-....... +-++.++|+..+|+.+-.... ...+++|.|-|+||..+-.+|..-
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368899988 8898865432211 223445788877776654432 567999999999999766665531
Q ss_pred -CCCccEEEEeCCcCCC
Q 035721 154 -KGAWDGLILNGAMCGI 169 (308)
Q Consensus 154 -p~~v~~~vl~~~~~~~ 169 (308)
+-.++|+++-++....
T Consensus 82 ~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 82 PPINLQGYMLGNPVTYM 98 (319)
T ss_pred CceeeeEEEeCCCCCCc
Confidence 1247888888876543
No 218
>PLN02310 triacylglycerol lipase
Probab=96.09 E-value=0.016 Score=47.10 Aligned_cols=21 Identities=33% Similarity=0.456 Sum_probs=18.4
Q ss_pred CCEEEEEechhhHHHHHHHHh
Q 035721 132 LPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 132 ~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
.++.+.|||+||.+|+..|..
T Consensus 209 ~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHH
Confidence 479999999999999988754
No 219
>PLN02571 triacylglycerol lipase
Probab=96.00 E-value=0.027 Score=46.02 Aligned_cols=39 Identities=13% Similarity=0.224 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHh
Q 035721 114 VEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
.+++.+.++.+...+. ...++++.|||+||.+|+..|..
T Consensus 207 r~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 207 RDQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 3445455544444321 12378999999999999988764
No 220
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.80 E-value=0.015 Score=46.70 Aligned_cols=88 Identities=16% Similarity=0.138 Sum_probs=45.4
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCC-CccccCC-CcchHHHHHHHHHHHHHHhcCCCCC
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSD-GLVAHIP-DLNPVVEDAISFFDSFRARHAPDLP 133 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~-~~~~~~~-~~~~~~~d~~~~l~~~~~~~~~~~~ 133 (308)
+++-.||+.||+-+....+|...+...... +.=..+..+|+-..- ....... --...++++.+.+..... .+
T Consensus 78 k~~HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si-----~k 151 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSI-----EK 151 (405)
T ss_pred CCceEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhcccc-----ce
Confidence 446789999999873223566666666554 222233333332211 1111100 111223333333333333 39
Q ss_pred EEEEEechhhHHHHHH
Q 035721 134 AFLYSESLGGAIALYI 149 (308)
Q Consensus 134 ~~l~G~S~Gg~~a~~~ 149 (308)
+-++|||+||.++..+
T Consensus 152 ISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 152 ISFVGHSLGGLVARYA 167 (405)
T ss_pred eeeeeeecCCeeeeEE
Confidence 9999999999876543
No 221
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=95.70 E-value=1.1 Score=37.66 Aligned_cols=124 Identities=12% Similarity=0.046 Sum_probs=73.0
Q ss_pred ceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchH-HHHHHHHHHHcCCeE-EEecCCCCcCCCCccccCCCc
Q 035721 33 SEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWI-VQLTAVLFAKSGFAT-CAIDHQGHGFSDGLVAHIPDL 110 (308)
Q Consensus 33 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~-~~~~~~~l~~~g~~v-~~~d~~G~G~s~~~~~~~~~~ 110 (308)
..++.+..+.++.|. +.|.+ -+.|..|...|+-..-. + --.+.+.| |... +.-|.|=-|.+--.....+ -
T Consensus 267 G~r~~D~~reEi~yY-FnPGD--~KPPL~VYFSGyR~aEG-FEgy~MMk~L---g~PfLL~~DpRleGGaFYlGs~ey-E 338 (511)
T TIGR03712 267 GQRLVDSKRQEFIYY-FNPGD--FKPPLNVYFSGYRPAEG-FEGYFMMKRL---GAPFLLIGDPRLEGGAFYLGSDEY-E 338 (511)
T ss_pred CceEecCCCCeeEEe-cCCcC--CCCCeEEeeccCcccCc-chhHHHHHhc---CCCeEEeeccccccceeeeCcHHH-H
Confidence 345556667777764 44554 34677899999865332 2 11234444 4544 4457776665533211100 1
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCCcCCC
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGAMCGI 169 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 169 (308)
+.+.+-|...++.|+- +...+++-|.|||..-|+.++++.. ..++|+--|...+
T Consensus 339 ~~I~~~I~~~L~~LgF---~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~NL 392 (511)
T TIGR03712 339 QGIINVIQEKLDYLGF---DHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVNL 392 (511)
T ss_pred HHHHHHHHHHHHHhCC---CHHHeeeccccccchhhhhhcccCC--CceEEEcCcccch
Confidence 1233344444444443 5568999999999999999998764 4677776665543
No 222
>PLN02408 phospholipase A1
Probab=95.66 E-value=0.026 Score=45.35 Aligned_cols=40 Identities=18% Similarity=0.087 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhc
Q 035721 114 VEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
.+++.+.++.+...+. ...++++.|||+||.+|..+|...
T Consensus 181 r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 181 QEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 3445555555544431 123699999999999999887653
No 223
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.63 E-value=0.041 Score=50.61 Aligned_cols=98 Identities=16% Similarity=0.138 Sum_probs=61.2
Q ss_pred CCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEE
Q 035721 56 KTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~ 135 (308)
...|++.|+|..-+... -...++..| ..|.+|..........+++..+.-...-++.+. +..+..
T Consensus 2121 se~~~~Ffv~pIEG~tt-~l~~la~rl----------e~PaYglQ~T~~vP~dSies~A~~yirqirkvQ----P~GPYr 2185 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTT-ALESLASRL----------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQ----PEGPYR 2185 (2376)
T ss_pred ccCCceEEEeccccchH-HHHHHHhhc----------CCcchhhhccccCCcchHHHHHHHHHHHHHhcC----CCCCee
Confidence 34688999999877654 334444443 223334332222222366666665555555444 455999
Q ss_pred EEEechhhHHHHHHHHhcC--CCccEEEEeCCcCC
Q 035721 136 LYSESLGGAIALYITLRQK--GAWDGLILNGAMCG 168 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~ 168 (308)
++|+|+|+.++..+|.... +....+|++++...
T Consensus 2186 l~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2186 LAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred eeccchhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 9999999999998887543 34566888887543
No 224
>PLN02934 triacylglycerol lipase
Probab=95.57 E-value=0.024 Score=47.28 Aligned_cols=35 Identities=26% Similarity=0.332 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHH
Q 035721 116 DAISFFDSFRARHAPDLPAFLYSESLGGAIALYITL 151 (308)
Q Consensus 116 d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 151 (308)
.+...++.+.... +..++++.|||+||.+|..++.
T Consensus 306 ~v~~~lk~ll~~~-p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEH-KNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHC-CCCeEEEeccccHHHHHHHHHH
Confidence 3455555554443 5669999999999999998874
No 225
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.43 E-value=0.018 Score=48.08 Aligned_cols=21 Identities=33% Similarity=0.472 Sum_probs=18.2
Q ss_pred CCEEEEEechhhHHHHHHHHh
Q 035721 132 LPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 132 ~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
.++.+.|||+||.+|+..|..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 379999999999999988754
No 226
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=95.39 E-value=0.049 Score=35.83 Aligned_cols=39 Identities=18% Similarity=0.187 Sum_probs=23.2
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccc
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS 72 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~ 72 (308)
-..+.+..+|..|++....+.. +...+|||+||++++--
T Consensus 68 ~phf~t~I~g~~iHFih~rs~~--~~aiPLll~HGWPgSf~ 106 (112)
T PF06441_consen 68 FPHFKTEIDGLDIHFIHVRSKR--PNAIPLLLLHGWPGSFL 106 (112)
T ss_dssp S-EEEEEETTEEEEEEEE--S---TT-EEEEEE--SS--GG
T ss_pred CCCeeEEEeeEEEEEEEeeCCC--CCCeEEEEECCCCccHH
Confidence 3456667789999998776644 35678999999998754
No 227
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=95.34 E-value=0.14 Score=40.01 Aligned_cols=133 Identities=19% Similarity=0.260 Sum_probs=85.7
Q ss_pred eEEcCCCcEEEEEEecCCCC-CCCcceEEEEccCCCccchH---HHHHH-----------HHHHHcCCeEEEecCC-CCc
Q 035721 35 YITNSRGLRLFTQWWTPLPP-AKTLGVLCVVHGFTGESSWI---VQLTA-----------VLFAKSGFATCAIDHQ-GHG 98 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~---~~~~~-----------~~l~~~g~~v~~~d~~-G~G 98 (308)
++...++....+.++..... ...+|..+.+.|.++.+..- ++.+. ..|.. ..++.+|-| |.|
T Consensus 7 ~v~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaG 84 (414)
T KOG1283|consen 7 YVDVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAG 84 (414)
T ss_pred ceeeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCc
Confidence 34444566666666654332 23478889999987665421 22221 12322 567888876 777
Q ss_pred CCCC--ccccCCCcchHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHhcC---------CCccEEEEeCC
Q 035721 99 FSDG--LVAHIPDLNPVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLRQK---------GAWDGLILNGA 165 (308)
Q Consensus 99 ~s~~--~~~~~~~~~~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p---------~~v~~~vl~~~ 165 (308)
.|-- ...+..+..+.+.|+.++++.+-.... ...|++|+..|+||-+|..++...- ..+.+++|-++
T Consensus 85 fSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDS 164 (414)
T KOG1283|consen 85 FSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDS 164 (414)
T ss_pred eeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCc
Confidence 7643 333334677888999999987765433 5679999999999999988776422 24678888777
Q ss_pred cCCC
Q 035721 166 MCGI 169 (308)
Q Consensus 166 ~~~~ 169 (308)
+...
T Consensus 165 WISP 168 (414)
T KOG1283|consen 165 WISP 168 (414)
T ss_pred ccCh
Confidence 6553
No 228
>PLN02324 triacylglycerol lipase
Probab=95.34 E-value=0.039 Score=45.03 Aligned_cols=40 Identities=10% Similarity=0.123 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHh
Q 035721 113 VVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
..+.+.+-++.+...+. ...+|.+.|||+||.+|+..|..
T Consensus 195 areqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 195 AQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34455555555554431 12369999999999999988753
No 229
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=95.33 E-value=0.087 Score=41.93 Aligned_cols=48 Identities=23% Similarity=0.340 Sum_probs=42.2
Q ss_pred cCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 246 FEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 246 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
..++.+|-.++.+..|.+.+++.+.-.++.+++ ...+.++|+..|...
T Consensus 325 ~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG-~kaLrmvPN~~H~~~ 372 (507)
T COG4287 325 QLRLALPKYIVNASGDDFFVPDSANLYYDDLPG-EKALRMVPNDPHNLI 372 (507)
T ss_pred hhhccccceeecccCCcccCCCccceeeccCCC-ceeeeeCCCCcchhh
Confidence 356789999999999999999999999999975 467889999999876
No 230
>PLN02847 triacylglycerol lipase
Probab=95.23 E-value=0.042 Score=46.81 Aligned_cols=23 Identities=35% Similarity=0.515 Sum_probs=19.8
Q ss_pred CCCCEEEEEechhhHHHHHHHHh
Q 035721 130 PDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 130 ~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
++-+++++|||+||.+|..++..
T Consensus 249 PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHH
Confidence 55699999999999999887764
No 231
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.23 E-value=0.086 Score=42.28 Aligned_cols=39 Identities=26% Similarity=0.353 Sum_probs=30.5
Q ss_pred CCCCEEEEEechhhHHHHHHHHhcCC-----CccEEEEeCCcCC
Q 035721 130 PDLPAFLYSESLGGAIALYITLRQKG-----AWDGLILNGAMCG 168 (308)
Q Consensus 130 ~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~ 168 (308)
+..|+.++|||+|+.+...++..-.+ .|..+++++.+..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 55589999999999998877665443 3788999987654
No 232
>PLN02753 triacylglycerol lipase
Probab=94.93 E-value=0.032 Score=46.75 Aligned_cols=39 Identities=26% Similarity=0.388 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHhcC----CCCCEEEEEechhhHHHHHHHH
Q 035721 113 VVEDAISFFDSFRARHA----PDLPAFLYSESLGGAIALYITL 151 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~ 151 (308)
..+++.+.++.+...+. ...+|.+.|||+||.+|+..|.
T Consensus 289 ~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 289 AREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 34455555555544321 2358999999999999998875
No 233
>PLN02802 triacylglycerol lipase
Probab=94.92 E-value=0.057 Score=45.19 Aligned_cols=38 Identities=21% Similarity=0.292 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHh
Q 035721 115 EDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 115 ~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
+++.+-++.+...+. ...+|++.|||+||.+|...|..
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 444444544444331 12378999999999999987764
No 234
>PLN02761 lipase class 3 family protein
Probab=94.74 E-value=0.07 Score=44.82 Aligned_cols=38 Identities=16% Similarity=0.202 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHhc----C-CCCCEEEEEechhhHHHHHHHH
Q 035721 114 VEDAISFFDSFRARH----A-PDLPAFLYSESLGGAIALYITL 151 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~----~-~~~~~~l~G~S~Gg~~a~~~a~ 151 (308)
.+++.+.++.+...+ . ...++.+.|||+||.+|...|.
T Consensus 271 R~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 271 REQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 345555555554432 0 2347999999999999998875
No 235
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=94.73 E-value=0.12 Score=38.89 Aligned_cols=65 Identities=17% Similarity=0.133 Sum_probs=37.5
Q ss_pred CCeEEEecCCCC-cCCC--CccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc
Q 035721 86 GFATCAIDHQGH-GFSD--GLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 86 g~~v~~~d~~G~-G~s~--~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
|+.+..+++|.. +--. +......+..+-++.+.+.++.... .+++++++|+|+|+.++...+.+.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~---~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA---AGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc---CCCCEEEEEECHHHHHHHHHHHHH
Confidence 577788888862 1100 1111112334444444444443222 455899999999999998777654
No 236
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=94.52 E-value=0.11 Score=39.85 Aligned_cols=50 Identities=26% Similarity=0.365 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCC
Q 035721 113 VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGA 165 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 165 (308)
+..+..+++..++..+ +..++.+-|||+||.+|..+..++. +-.+..-+|
T Consensus 258 yySa~ldI~~~v~~~Y-pda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 258 YYSAALDILGAVRRIY-PDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred hhHHHHHHHHHHHHhC-CCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 3344445555555544 6679999999999999999988775 444544444
No 237
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=94.52 E-value=0.11 Score=39.85 Aligned_cols=50 Identities=26% Similarity=0.365 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCC
Q 035721 113 VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGA 165 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 165 (308)
+..+..+++..++..+ +..++.+-|||+||.+|..+..++. +-.+..-+|
T Consensus 258 yySa~ldI~~~v~~~Y-pda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 258 YYSAALDILGAVRRIY-PDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred hhHHHHHHHHHHHHhC-CCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 3344445555555544 6679999999999999999988775 444544444
No 238
>PLN02719 triacylglycerol lipase
Probab=94.45 E-value=0.086 Score=44.21 Aligned_cols=40 Identities=23% Similarity=0.319 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHhcC----CCCCEEEEEechhhHHHHHHHHh
Q 035721 113 VVEDAISFFDSFRARHA----PDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
..+++.+.++.+...+. ...++.+.|||+||.+|+..|..
T Consensus 275 aReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 275 AREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 34555555555554431 12379999999999999988753
No 239
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=93.59 E-value=0.17 Score=40.66 Aligned_cols=58 Identities=14% Similarity=0.079 Sum_probs=45.3
Q ss_pred CcceEEEeeCCCcccChHHHHHHHHHhcC----------------------CC-CcEEEecCCcccccCCchhhHHHhhh
Q 035721 250 EVPMLICHGGDDVVCDPACVEELYKRAAS----------------------KD-KTLSIYPGMWHQLIGEPEENVELVFG 306 (308)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----------------------~~-~~~~~~~~~gH~~~~~~~~~~~~i~~ 306 (308)
.++||+..|+.|.+|+.-..+.+.+.+.- .+ .++..+.+|||+...+|+...+.+.+
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~~qP~~al~m~~~ 312 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMFQR 312 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCCcCHHHHHHHHHH
Confidence 47999999999999998888888777640 12 67778889999988778877766554
Q ss_pred c
Q 035721 307 E 307 (308)
Q Consensus 307 ~ 307 (308)
+
T Consensus 313 f 313 (319)
T PLN02213 313 W 313 (319)
T ss_pred H
Confidence 4
No 240
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.37 E-value=0.15 Score=41.14 Aligned_cols=36 Identities=22% Similarity=0.289 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh
Q 035721 116 DAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 116 d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
.+.+.++.+.... +.-++.+-|||+||.+|..+|..
T Consensus 156 ~~~~~~~~L~~~~-~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 156 GLDAELRRLIELY-PNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHhc-CCcEEEEecCChHHHHHHHHHHH
Confidence 3444444444333 44599999999999999988764
No 241
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=93.04 E-value=0.76 Score=29.57 Aligned_cols=84 Identities=14% Similarity=0.113 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhH--HHHHHHH
Q 035721 74 IVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGA--IALYITL 151 (308)
Q Consensus 74 ~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~--~a~~~a~ 151 (308)
.+..+.+.+..+|+..=.+.++..|.+....-.....+.=...+..+++.. +..+++++|-|--.= +-..++.
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~f-----P~~kfiLIGDsgq~DpeiY~~ia~ 86 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDF-----PERKFILIGDSGQHDPEIYAEIAR 86 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHC-----CCCcEEEEeeCCCcCHHHHHHHHH
Confidence 456777778777888777777777554322111001111223344444433 455999999995443 3446788
Q ss_pred hcCCCccEEEE
Q 035721 152 RQKGAWDGLIL 162 (308)
Q Consensus 152 ~~p~~v~~~vl 162 (308)
++|++|.++.+
T Consensus 87 ~~P~~i~ai~I 97 (100)
T PF09949_consen 87 RFPGRILAIYI 97 (100)
T ss_pred HCCCCEEEEEE
Confidence 99999998864
No 242
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.83 E-value=0.16 Score=43.16 Aligned_cols=53 Identities=19% Similarity=0.303 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHh-----cCC------CccEEEEeCCc
Q 035721 114 VEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLR-----QKG------AWDGLILNGAM 166 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~-----~p~------~v~~~vl~~~~ 166 (308)
+.-...+++.+....- +..+++.+||||||.++=.+... .|+ ..+|+|.++.+
T Consensus 507 ~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 507 AARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 3334445554444321 67899999999999887654432 232 35677766654
No 243
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=92.20 E-value=0.17 Score=36.61 Aligned_cols=45 Identities=18% Similarity=0.256 Sum_probs=35.6
Q ss_pred CcceEEEeeCCCcccChHHHHHHHHHhcC---CCCcEEEecCCccccc
Q 035721 250 EVPMLICHGGDDVVCDPACVEELYKRAAS---KDKTLSIYPGMWHQLI 294 (308)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~ 294 (308)
+++++-|-|+.|.++.+.+.....+.+.+ ....-++.+|+||+-.
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGl 181 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGL 181 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeec
Confidence 56788899999999998887776666543 3457778899999977
No 244
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=91.98 E-value=1.8 Score=33.99 Aligned_cols=95 Identities=11% Similarity=-0.006 Sum_probs=53.4
Q ss_pred ceEEEEccCCCccchH-----HHHHHHHH-HHcCCeEEEecCCCCcCC--------CCcccc---CCCcchHHHHHHHHH
Q 035721 59 GVLCVVHGFTGESSWI-----VQLTAVLF-AKSGFATCAIDHQGHGFS--------DGLVAH---IPDLNPVVEDAISFF 121 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~-----~~~~~~~l-~~~g~~v~~~d~~G~G~s--------~~~~~~---~~~~~~~~~d~~~~l 121 (308)
..|||+=|.+.+.... ...+.+.+ ...+-..+++=.+|-|.. ...... ...-....+.+....
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 4567777766543311 12455555 222335555666788872 111110 001123345555566
Q ss_pred HHHHHhcCCCCCEEEEEechhhHHHHHHHHhc
Q 035721 122 DSFRARHAPDLPAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 122 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
..+.....+..++.++|+|-|+..|-.++..-
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 66544433667899999999999998888653
No 245
>PF03283 PAE: Pectinacetylesterase
Probab=91.84 E-value=0.84 Score=37.30 Aligned_cols=53 Identities=15% Similarity=0.030 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHh-cCCCCCEEEEEechhhHHHHHHH----HhcCCCccEEEEeCCcC
Q 035721 115 EDAISFFDSFRAR-HAPDLPAFLYSESLGGAIALYIT----LRQKGAWDGLILNGAMC 167 (308)
Q Consensus 115 ~d~~~~l~~~~~~-~~~~~~~~l~G~S~Gg~~a~~~a----~~~p~~v~~~vl~~~~~ 167 (308)
..+.++++.+... ....++++|.|.|.||.-++..+ ...|..++-..+.++..
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~ 195 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGF 195 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccc
Confidence 4566777777665 22667999999999999887544 34554444444444433
No 246
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=91.47 E-value=0.15 Score=42.76 Aligned_cols=58 Identities=19% Similarity=0.268 Sum_probs=43.0
Q ss_pred CcceEEEeeCCCcccChHHHHHHHHHhcC------------------------CCCcEEEecCCccccc-CCchhhHHHh
Q 035721 250 EVPMLICHGGDDVVCDPACVEELYKRAAS------------------------KDKTLSIYPGMWHQLI-GEPEENVELV 304 (308)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~gH~~~-~~~~~~~~~i 304 (308)
.++||+.+|..|.+++.-..+.+.+.+.- .+.+++.+.+|||++. ++|+...+.+
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 38999999999999999998888877631 1456888999999999 9999877776
Q ss_pred hhc
Q 035721 305 FGE 307 (308)
Q Consensus 305 ~~~ 307 (308)
.++
T Consensus 410 ~~f 412 (415)
T PF00450_consen 410 RRF 412 (415)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 247
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=91.06 E-value=0.52 Score=39.60 Aligned_cols=58 Identities=14% Similarity=0.079 Sum_probs=45.5
Q ss_pred CcceEEEeeCCCcccChHHHHHHHHHhcC----------------------CC-CcEEEecCCcccccCCchhhHHHhhh
Q 035721 250 EVPMLICHGGDDVVCDPACVEELYKRAAS----------------------KD-KTLSIYPGMWHQLIGEPEENVELVFG 306 (308)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----------------------~~-~~~~~~~~~gH~~~~~~~~~~~~i~~ 306 (308)
.++||+..|+.|.+|+.-..+.+.+.+.- .+ .+++.+.+|||+...+|++..+.+.+
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp~qP~~al~m~~~ 426 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMFQR 426 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCCCCHHHHHHHHHH
Confidence 47999999999999998888888776630 12 57788889999998778877666554
Q ss_pred c
Q 035721 307 E 307 (308)
Q Consensus 307 ~ 307 (308)
+
T Consensus 427 F 427 (433)
T PLN03016 427 W 427 (433)
T ss_pred H
Confidence 4
No 248
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=88.94 E-value=6.4 Score=31.31 Aligned_cols=96 Identities=11% Similarity=-0.022 Sum_probs=59.6
Q ss_pred CcceEEEEccCCCccc----hHHHHHHHHHHH-cCCeEEEecCCCCcCCCCc----------cccCC--CcchHHHHHHH
Q 035721 57 TLGVLCVVHGFTGESS----WIVQLTAVLFAK-SGFATCAIDHQGHGFSDGL----------VAHIP--DLNPVVEDAIS 119 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~----~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~----------~~~~~--~~~~~~~d~~~ 119 (308)
.+..|+|+-|....-. .-.-.+...|.. .+.+++++--+|.|.-.-. ..... --..+.+.|..
T Consensus 30 ~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~ 109 (423)
T COG3673 30 MKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIRE 109 (423)
T ss_pred cceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHH
Confidence 4677888888532211 011245555655 5788888888888754211 00000 01223456777
Q ss_pred HHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh
Q 035721 120 FFDSFRARHAPDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 120 ~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
+-..+...+.++.+|.++|+|-|+.+|--+|..
T Consensus 110 AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 110 AYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 777776665588899999999999998777754
No 249
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=88.89 E-value=1 Score=37.85 Aligned_cols=58 Identities=19% Similarity=0.163 Sum_probs=43.4
Q ss_pred CcceEEEeeCCCcccChHHHHHHHHHhcC-----------------------CCCcEEEecCCccccc-CCchhhHHHhh
Q 035721 250 EVPMLICHGGDDVVCDPACVEELYKRAAS-----------------------KDKTLSIYPGMWHQLI-GEPEENVELVF 305 (308)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~gH~~~-~~~~~~~~~i~ 305 (308)
..+++|..|+.|.+||.-..+.+.+.+.- .+..+..+.|+||++. .+|+.....+.
T Consensus 363 ~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~ 442 (454)
T KOG1282|consen 363 GYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQ 442 (454)
T ss_pred ceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHH
Confidence 37999999999999998887776555420 1234577889999988 88887666655
Q ss_pred hc
Q 035721 306 GE 307 (308)
Q Consensus 306 ~~ 307 (308)
.+
T Consensus 443 ~f 444 (454)
T KOG1282|consen 443 RF 444 (454)
T ss_pred HH
Confidence 44
No 250
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=87.34 E-value=5.3 Score=27.00 Aligned_cols=32 Identities=31% Similarity=0.419 Sum_probs=22.8
Q ss_pred CCcceEEEEccCCCccchHH-HHHHHHHHHcCC
Q 035721 56 KTLGVLCVVHGFTGESSWIV-QLTAVLFAKSGF 87 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~-~~~~~~l~~~g~ 87 (308)
+.+|.|+-+||+.|++..+. +-+++.|-..|.
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~ 82 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGM 82 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHHHHHHHHHHhccc
Confidence 56899999999999887443 355666655553
No 251
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=86.58 E-value=9.1 Score=27.68 Aligned_cols=38 Identities=16% Similarity=0.261 Sum_probs=30.3
Q ss_pred CcceEEEEccCCCccch-HHHHHHHHHHHcCCeEEEecC
Q 035721 57 TLGVLCVVHGFTGESSW-IVQLTAVLFAKSGFATCAIDH 94 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~ 94 (308)
.++.+|++.|+.+++.. .-..+.+.|.+.|++++..|=
T Consensus 21 ~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 21 QKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 36789999999887653 335678888899999999983
No 252
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.27 E-value=2.2 Score=36.05 Aligned_cols=40 Identities=28% Similarity=0.289 Sum_probs=30.9
Q ss_pred CCCCEEEEEechhhHHHHHHHHhc-----CCCccEEEEeCCcCCC
Q 035721 130 PDLPAFLYSESLGGAIALYITLRQ-----KGAWDGLILNGAMCGI 169 (308)
Q Consensus 130 ~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~ 169 (308)
+.+||.++|+|+|+.+.......- -+.|..+++++++...
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 667999999999999988665522 2458889999887654
No 253
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=85.31 E-value=4.9 Score=29.82 Aligned_cols=38 Identities=13% Similarity=0.097 Sum_probs=31.2
Q ss_pred cceEEEEccCCCccch--HHHHHHHHHHHcCCeEEEecCC
Q 035721 58 LGVLCVVHGFTGESSW--IVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~--~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+.|.|++-.+.+..+ |.+...+.|.+.|..+..+++-
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~ 71 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLS 71 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeecc
Confidence 5689999998887765 6678888999999999888763
No 254
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=78.77 E-value=21 Score=27.31 Aligned_cols=38 Identities=11% Similarity=-0.117 Sum_probs=28.0
Q ss_pred cceEEEEccCCCc--cchHHHHHHHHHHHcCCeEEEecCC
Q 035721 58 LGVLCVVHGFTGE--SSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 58 ~~~vv~~hG~~~~--~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.|.|+|++-.... ...|.+.+.+.|.+.|+.|..++..
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 5669999887633 3345567778888889999888765
No 255
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=78.65 E-value=6 Score=27.97 Aligned_cols=37 Identities=14% Similarity=0.241 Sum_probs=27.6
Q ss_pred cceEEEEccCCCccch-HHHHHHHHHHHcCCeEEEecC
Q 035721 58 LGVLCVVHGFTGESSW-IVQLTAVLFAKSGFATCAIDH 94 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~ 94 (308)
++.||++-|..++... .-..+.+.|.+.|+.|+.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 4679999999888652 345677888888999999983
No 256
>PRK02399 hypothetical protein; Provisional
Probab=78.21 E-value=36 Score=28.42 Aligned_cols=101 Identities=15% Similarity=0.066 Sum_probs=59.3
Q ss_pred EEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc---------cCCC-------------cchHHHHHHH
Q 035721 62 CVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA---------HIPD-------------LNPVVEDAIS 119 (308)
Q Consensus 62 v~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~---------~~~~-------------~~~~~~d~~~ 119 (308)
|++=|...+...-...+.+.+.+.|..|+.+|.-..|....... ...+ ++.+.+-...
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 45556566665455677788888899999999844432111000 0001 1112223333
Q ss_pred HHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEe
Q 035721 120 FFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILN 163 (308)
Q Consensus 120 ~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~ 163 (308)
+++.+..+. .-.-++-+|-|.|..++....+..|--+-++++.
T Consensus 86 ~v~~L~~~g-~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVS 128 (406)
T PRK02399 86 FVRELYERG-DVAGVIGLGGSGGTALATPAMRALPIGVPKLMVS 128 (406)
T ss_pred HHHHHHhcC-CccEEEEecCcchHHHHHHHHHhCCCCCCeEEEE
Confidence 443333331 3345778899999999999999888666666653
No 257
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=78.17 E-value=31 Score=27.12 Aligned_cols=39 Identities=23% Similarity=0.146 Sum_probs=28.4
Q ss_pred CCCCEEEEEechhhHHHHHHHH---hcCCCccEEEEeCCcCC
Q 035721 130 PDLPAFLYSESLGGAIALYITL---RQKGAWDGLILNGAMCG 168 (308)
Q Consensus 130 ~~~~~~l~G~S~Gg~~a~~~a~---~~p~~v~~~vl~~~~~~ 168 (308)
...|+++.|.|+|+.-+..... ..-++++++++.+|+..
T Consensus 107 ~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 107 RRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFF 148 (289)
T ss_pred cCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCC
Confidence 4568999999999886554332 23367999999998644
No 258
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=77.18 E-value=13 Score=27.69 Aligned_cols=72 Identities=6% Similarity=-0.065 Sum_probs=45.1
Q ss_pred HHHHHHHcCC-eEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEech----hhHHHHHHHHh
Q 035721 78 TAVLFAKSGF-ATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESL----GGAIALYITLR 152 (308)
Q Consensus 78 ~~~~l~~~g~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~----Gg~~a~~~a~~ 152 (308)
..+.+...|. +|+..|.++... ++.+.+++.+.++++... ..++++|+|. |..++-++|.+
T Consensus 68 ~~~~l~~~G~d~V~~~~~~~~~~--------~~~e~~a~al~~~i~~~~------p~lVL~~~t~~~~~grdlaprlAar 133 (202)
T cd01714 68 ALREALAMGADRAILVSDRAFAG--------ADTLATAKALAAAIKKIG------VDLILTGKQSIDGDTGQVGPLLAEL 133 (202)
T ss_pred HHHHHHHcCCCEEEEEecccccC--------CChHHHHHHHHHHHHHhC------CCEEEEcCCcccCCcCcHHHHHHHH
Confidence 3444445566 677777653322 356666777777665533 2899999998 88888888877
Q ss_pred cC-CCccEEEEe
Q 035721 153 QK-GAWDGLILN 163 (308)
Q Consensus 153 ~p-~~v~~~vl~ 163 (308)
.. ..+..++-+
T Consensus 134 Lga~lvsdv~~l 145 (202)
T cd01714 134 LGWPQITYVSKI 145 (202)
T ss_pred hCCCccceEEEE
Confidence 53 234444433
No 259
>PRK12467 peptide synthase; Provisional
Probab=76.98 E-value=8.8 Score=42.54 Aligned_cols=98 Identities=16% Similarity=-0.011 Sum_probs=62.7
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
.+.+++.|...++.. .+..+...+.. +..++.+..++.-.-.. ...+++.++......+.+... ..+..+.
T Consensus 3692 ~~~l~~~h~~~r~~~-~~~~l~~~l~~-~~~~~~l~~~~~~~d~~---~~~~~~~~~~~y~~~~~~~~~----~~p~~l~ 3762 (3956)
T PRK12467 3692 FPALFCRHEGLGTVF-DYEPLAVILEG-DRHVLGLTCRHLLDDGW---QDTSLQAMAVQYADYILWQQA----KGPYGLL 3762 (3956)
T ss_pred ccceeeechhhcchh-hhHHHHHHhCC-CCcEEEEeccccccccC---CccchHHHHHHHHHHHHHhcc----CCCeeee
Confidence 356999999887754 44567777754 47888887765432211 112556666666666655443 3388999
Q ss_pred EechhhHHHHHHHHhc---CCCccEEEEeC
Q 035721 138 SESLGGAIALYITLRQ---KGAWDGLILNG 164 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~~---p~~v~~~vl~~ 164 (308)
|+|+||.++..++..- .+.+.-+.++.
T Consensus 3763 g~s~g~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3763 GWSLGGTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred eeecchHHHHHHHHHHHHcCCceeEEEEEe
Confidence 9999999998877643 34455555543
No 260
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=76.24 E-value=11 Score=30.81 Aligned_cols=88 Identities=24% Similarity=0.262 Sum_probs=55.3
Q ss_pred CcceEEEEccCCCccc------hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCC
Q 035721 57 TLGVLCVVHGFTGESS------WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAP 130 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~------~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~ 130 (308)
+...||++||-.-+.. ..|..+++.+.++|+ +-.+|.--+|.-++ ++ +|...+-..+...
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~l-ip~~D~AYQGF~~G-------le---eDa~~lR~~a~~~--- 235 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGL-IPFFDIAYQGFADG-------LE---EDAYALRLFAEVG--- 235 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCC-eeeeehhhhhhccc-------hH---HHHHHHHHHHHhC---
Confidence 3567999999543322 358899999998864 55667655554322 22 3333332223332
Q ss_pred CCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCC
Q 035721 131 DLPAFLYSESLGGAIALYITLRQKGAWDGLILNGA 165 (308)
Q Consensus 131 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 165 (308)
+-.++..|+.=..++ |.+||.++.+++.
T Consensus 236 --~~~lva~S~SKnfgL-----YgERVGa~~vva~ 263 (396)
T COG1448 236 --PELLVASSFSKNFGL-----YGERVGALSVVAE 263 (396)
T ss_pred --CcEEEEehhhhhhhh-----hhhccceeEEEeC
Confidence 448888887666543 6789999998876
No 261
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=74.19 E-value=5.9 Score=30.06 Aligned_cols=35 Identities=11% Similarity=0.293 Sum_probs=26.3
Q ss_pred ceEEEEccCCCccchHHHHHHHHHHHcCCeEEEec
Q 035721 59 GVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAID 93 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d 93 (308)
..||++|............+++.|.++||+++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 46999998533322356789999999999998875
No 262
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=73.88 E-value=5.1 Score=34.36 Aligned_cols=49 Identities=24% Similarity=0.306 Sum_probs=38.7
Q ss_pred cCCCCcceEEEeeCCCcccChHHHHHHHHHhcC----C------CCcEEEecCCccccc
Q 035721 246 FEEVEVPMLICHGGDDVVCDPACVEELYKRAAS----K------DKTLSIYPGMWHQLI 294 (308)
Q Consensus 246 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~------~~~~~~~~~~gH~~~ 294 (308)
+++-.-.+++.||..|.++++..+..+++++.. . -.++..+||.+|+.-
T Consensus 349 F~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~g 407 (474)
T PF07519_consen 349 FRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGG 407 (474)
T ss_pred HHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCC
Confidence 334467899999999999999888887776531 1 258999999999987
No 263
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=73.45 E-value=31 Score=26.79 Aligned_cols=39 Identities=10% Similarity=0.210 Sum_probs=26.9
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCCe-EEEecCC
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFA-TCAIDHQ 95 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~-v~~~d~~ 95 (308)
+.+.|++++-.++....+.+...+.|.+.|+. |-.++.+
T Consensus 27 ~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 27 EDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 35678888876655544566777888888884 5566664
No 264
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=72.36 E-value=3.9 Score=33.74 Aligned_cols=51 Identities=24% Similarity=0.196 Sum_probs=33.5
Q ss_pred HHhhhhcCCCCcceEEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCccccc
Q 035721 240 RDLQGRFEEVEVPMLICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLI 294 (308)
Q Consensus 240 ~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 294 (308)
.++...+++-.-.+++|+|+.|++.-. .-.+.+ ...++.+.+.||++|...
T Consensus 341 ~dI~~Wvr~~~~rmlFVYG~nDPW~A~--~f~l~~--g~~ds~v~~~PggnHga~ 391 (448)
T PF05576_consen 341 RDIDRWVRNNGPRMLFVYGENDPWSAE--PFRLGK--GKRDSYVFTAPGGNHGAR 391 (448)
T ss_pred HHHHHHHHhCCCeEEEEeCCCCCcccC--ccccCC--CCcceEEEEcCCCccccc
Confidence 344444555666899999999998621 111111 125678888899999866
No 265
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=72.33 E-value=27 Score=26.22 Aligned_cols=39 Identities=10% Similarity=0.018 Sum_probs=29.5
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHc-CCeEEEecCCC
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKS-GFATCAIDHQG 96 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G 96 (308)
.+.|++++-.......+.+.+.+.|.+. |+.+..++...
T Consensus 31 ~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~ 70 (212)
T cd03146 31 RPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFD 70 (212)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccC
Confidence 5678888887765555667788888888 99988887643
No 266
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=71.55 E-value=55 Score=27.42 Aligned_cols=101 Identities=12% Similarity=-0.016 Sum_probs=60.2
Q ss_pred EEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc---------cCCC-------------cchHHHHHHH
Q 035721 62 CVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA---------HIPD-------------LNPVVEDAIS 119 (308)
Q Consensus 62 v~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~---------~~~~-------------~~~~~~d~~~ 119 (308)
|++=|...+...-+..+.+.+.+.|..|+.+|.-=.+....... ...+ ++.+.+-+..
T Consensus 4 I~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 83 (403)
T PF06792_consen 4 IAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAAR 83 (403)
T ss_pred EEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHHH
Confidence 33445555555455678888888999999999644443322110 0001 1122233334
Q ss_pred HHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEe
Q 035721 120 FFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILN 163 (308)
Q Consensus 120 ~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~ 163 (308)
++..+..+. .-.-++-+|-|.|..++....+..|--+-++++.
T Consensus 84 ~v~~l~~~g-~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 84 FVSDLYDEG-KIDGVIGIGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred HHHHHHhcC-CccEEEEecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 444444321 2235778899999999999999888666666653
No 267
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=70.70 E-value=9.2 Score=32.48 Aligned_cols=120 Identities=17% Similarity=0.166 Sum_probs=59.1
Q ss_pred EEEEEEecCCCCCCCcceEEEEccCCCccch-HH-HHHHHHHHHc-CCeEEEecCCC--Cc-----CCCCccccCCCcch
Q 035721 43 RLFTQWWTPLPPAKTLGVLCVVHGFTGESSW-IV-QLTAVLFAKS-GFATCAIDHQG--HG-----FSDGLVAHIPDLNP 112 (308)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~-~~-~~~~~~l~~~-g~~v~~~d~~G--~G-----~s~~~~~~~~~~~~ 112 (308)
-|+..+|.|.....+..++|.+-|.|.-+.. .. -.=.+.|+.. ..-|+.+++|= +| ..+..++.. .+-
T Consensus 120 CLYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNm-Gl~- 197 (601)
T KOG4389|consen 120 CLYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNM-GLL- 197 (601)
T ss_pred ceEEEEeccCCCCCCceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCcc-chH-
Confidence 3677778884322344577888886643320 00 0113445443 34566666661 11 122222221 222
Q ss_pred HHHHHHHHHHHHHHh---cC-CCCCEEEEEechhhHHHH-HHHH-hcCCCccEEEEeCCcC
Q 035721 113 VVEDAISFFDSFRAR---HA-PDLPAFLYSESLGGAIAL-YITL-RQKGAWDGLILNGAMC 167 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~---~~-~~~~~~l~G~S~Gg~~a~-~~a~-~~p~~v~~~vl~~~~~ 167 (308)
|-.-+++++++. .+ ++.++.|+|.|.|+.-.. ++.+ .....++..|+-++..
T Consensus 198 ---DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~ 255 (601)
T KOG4389|consen 198 ---DQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSL 255 (601)
T ss_pred ---HHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCC
Confidence 222333444332 22 788999999999987443 2221 1113466666655543
No 268
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=70.57 E-value=14 Score=22.35 Aligned_cols=43 Identities=9% Similarity=0.043 Sum_probs=29.0
Q ss_pred hHHHHHHHHHHHHHHhcC--CCCCEEEEEechhhHHHHHHHHhcC
Q 035721 112 PVVEDAISFFDSFRARHA--PDLPAFLYSESLGGAIALYITLRQK 154 (308)
Q Consensus 112 ~~~~d~~~~l~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p 154 (308)
...+.+...+++.+.... .+.++.++|-|.|=.+|.+.+..+.
T Consensus 18 GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 18 GCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp HHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhc
Confidence 345666777777766322 5578999999999888888777653
No 269
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=70.22 E-value=52 Score=25.97 Aligned_cols=97 Identities=21% Similarity=0.215 Sum_probs=50.8
Q ss_pred EccCCCccchHHHHHHHHHHHcCCeEEEe------cCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 64 VHGFTGESSWIVQLTAVLFAKSGFATCAI------DHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 64 ~hG~~~~~~~~~~~~~~~l~~~g~~v~~~------d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
+||.-+++. -...|...|++|+++ .++|+|...+.. ...++..++..-++..... ..-+.++-
T Consensus 11 v~G~vGn~A-----A~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v----~~~e~l~~~l~~l~~~~~~--~~~davlt 79 (281)
T COG2240 11 VYGSVGNSA-----AIFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIV----MPPEQLADLLNGLEAIDKL--GECDAVLT 79 (281)
T ss_pred eecccccHh-----HHHHHHHcCCceeeeceEEecCCCCCCCCCCcC----CCHHHHHHHHHHHHhcccc--cccCEEEE
Confidence 456555543 234466678887665 578888765432 2333333333333332111 23367787
Q ss_pred Eechhh----HHHHHHHHhcCCCccEEEEeCCcCCCCc
Q 035721 138 SESLGG----AIALYITLRQKGAWDGLILNGAMCGISQ 171 (308)
Q Consensus 138 G~S~Gg----~~a~~~a~~~p~~v~~~vl~~~~~~~~~ 171 (308)
|+=-.+ .++-.+.+.....-+.+++++|..+-..
T Consensus 80 GYlgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~g 117 (281)
T COG2240 80 GYLGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPG 117 (281)
T ss_pred ccCCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCC
Confidence 773222 2332333322334568899999877544
No 270
>PLN02840 tRNA dimethylallyltransferase
Probab=69.42 E-value=29 Score=29.24 Aligned_cols=78 Identities=17% Similarity=0.124 Sum_probs=45.4
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHc-CCeEEEecC----CCC--cCCCC----------------ccccCCCcchH
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKS-GFATCAIDH----QGH--GFSDG----------------LVAHIPDLNPV 113 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~----~G~--G~s~~----------------~~~~~~~~~~~ 113 (308)
.+..+|++-|-.+++. ..++..|++. +..++..|- +|. |...+ .+...++..++
T Consensus 19 ~~~~vi~I~GptgsGK---Ttla~~La~~~~~~iis~Ds~qvYr~~~IgTaKpt~eE~~~V~Hhlidil~p~e~ySv~~F 95 (421)
T PLN02840 19 KKEKVIVISGPTGAGK---SRLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLSERKEVPHHLIDILHPSDDYSVGAF 95 (421)
T ss_pred cCCeEEEEECCCCCCH---HHHHHHHHHHCCCCeEeccccceecceeEEcCCCCHHHHcCCCeEeEeecCCCCceeHHHH
Confidence 3456777777766655 2445555554 456777774 332 11111 12233577788
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEec
Q 035721 114 VEDAISFFDSFRARHAPDLPAFLYSES 140 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~~~~~~~l~G~S 140 (308)
.++....++.+..+ +. ..+|+|-+
T Consensus 96 ~~~A~~~I~~i~~r--gk-iPIvVGGT 119 (421)
T PLN02840 96 FDDARRATQDILNR--GR-VPIVAGGT 119 (421)
T ss_pred HHHHHHHHHHHHhc--CC-CEEEEcCc
Confidence 89999999988775 22 34555544
No 271
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=69.10 E-value=44 Score=27.88 Aligned_cols=38 Identities=13% Similarity=0.060 Sum_probs=28.8
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSD 101 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 101 (308)
|||+|...- . .++.+++.|.++|+.|.++-..+.+...
T Consensus 2 il~~~~~~p--~-~~~~la~~L~~~G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNFP--G-QFRHLAPALAAQGHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCCc--h-hHHHHHHHHHHCCCEEEEEecCCCCCCC
Confidence 789988542 2 3478999999999999998777665433
No 272
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=68.73 E-value=33 Score=25.67 Aligned_cols=38 Identities=13% Similarity=0.065 Sum_probs=25.5
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCC-eEEEecC
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGF-ATCAIDH 94 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~-~v~~~d~ 94 (308)
...+|++.||...++...+.-+-..|.+.|| .|++...
T Consensus 137 ~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~v 175 (265)
T COG4822 137 DEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAV 175 (265)
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEe
Confidence 4568889999876655455556666777788 5555443
No 273
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=66.42 E-value=8.6 Score=28.23 Aligned_cols=35 Identities=11% Similarity=0.210 Sum_probs=24.1
Q ss_pred ceEEEEccCCCc--cchHHHHHHHHHHHcCCeEEEec
Q 035721 59 GVLCVVHGFTGE--SSWIVQLTAVLFAKSGFATCAID 93 (308)
Q Consensus 59 ~~vv~~hG~~~~--~~~~~~~~~~~l~~~g~~v~~~d 93 (308)
..||++|..... .......+++.|.++||+++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 459999952211 11245678899999999998874
No 274
>PRK06490 glutamine amidotransferase; Provisional
Probab=66.33 E-value=58 Score=25.08 Aligned_cols=85 Identities=14% Similarity=0.132 Sum_probs=47.4
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC-CCcC----C--CC-----ccccCCCcchHHHHHHHHHHHH
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ-GHGF----S--DG-----LVAHIPDLNPVVEDAISFFDSF 124 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~-G~G~----s--~~-----~~~~~~~~~~~~~d~~~~l~~~ 124 (308)
...++|+.|--.+... .+.+.|.+.|+.+-.++.. |--. . +. .+...++...+..++.++++..
T Consensus 7 ~~~vlvi~h~~~~~~g----~l~~~l~~~g~~~~v~~~~~~~~~p~~l~~~dgvii~Ggp~~~~d~~~wi~~~~~~i~~~ 82 (239)
T PRK06490 7 KRPVLIVLHQERSTPG----RVGQLLQERGYPLDIRRPRLGDPLPDTLEDHAGAVIFGGPMSANDPDDFIRREIDWISVP 82 (239)
T ss_pred CceEEEEecCCCCCCh----HHHHHHHHCCCceEEEeccCCCCCCCcccccCEEEEECCCCCCCCCchHHHHHHHHHHHH
Confidence 3456777787544433 4566777777776665422 1000 0 00 0111123334556666777665
Q ss_pred HHhcCCCCCEEEEEechhhHHHHHHH
Q 035721 125 RARHAPDLPAFLYSESLGGAIALYIT 150 (308)
Q Consensus 125 ~~~~~~~~~~~l~G~S~Gg~~a~~~a 150 (308)
... ++=++|.|+|..+...+.
T Consensus 83 ~~~-----~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 83 LKE-----NKPFLGICLGAQMLARHL 103 (239)
T ss_pred HHC-----CCCEEEECHhHHHHHHHc
Confidence 544 566999999998776654
No 275
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=64.78 E-value=10 Score=26.50 Aligned_cols=37 Identities=14% Similarity=0.207 Sum_probs=25.9
Q ss_pred EEEEccCCC---ccchHHHHHHHHHHHcCCeEEEecCCCC
Q 035721 61 LCVVHGFTG---ESSWIVQLTAVLFAKSGFATCAIDHQGH 97 (308)
Q Consensus 61 vv~~hG~~~---~~~~~~~~~~~~l~~~g~~v~~~d~~G~ 97 (308)
|+++.|... +.....+.+.+.+.+.|+.+-.+|++.+
T Consensus 3 ilii~gS~r~~~~t~~l~~~~~~~l~~~g~e~~~i~l~~~ 42 (152)
T PF03358_consen 3 ILIINGSPRKNSNTRKLAEAVAEQLEEAGAEVEVIDLADY 42 (152)
T ss_dssp EEEEESSSSTTSHHHHHHHHHHHHHHHTTEEEEEEECTTS
T ss_pred EEEEECcCCCCCHHHHHHHHHHHHHHHcCCEEEEEecccc
Confidence 667777653 3333456677777777899999998865
No 276
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=64.43 E-value=9.5 Score=29.88 Aligned_cols=34 Identities=12% Similarity=0.304 Sum_probs=26.9
Q ss_pred ceEEEEccCCCccchHHHHHHHHHHHcCCeEEEec
Q 035721 59 GVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAID 93 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d 93 (308)
..||++|....+.. ....+++.|.++||.++.++
T Consensus 231 G~IILmHd~~~T~~-aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTE-GLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHH-HHHHHHHHHHHCCCEEEeHH
Confidence 46889998655444 56789999999999998875
No 277
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=63.45 E-value=73 Score=25.21 Aligned_cols=100 Identities=12% Similarity=0.032 Sum_probs=54.4
Q ss_pred CCcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCC------CcCC-----------------CCcccc-CCCc
Q 035721 56 KTLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQG------HGFS-----------------DGLVAH-IPDL 110 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G------~G~s-----------------~~~~~~-~~~~ 110 (308)
..+|+++++-|..|++. .|.+.+..++.+++-+.+++++-- ++.. -++.+. ..++
T Consensus 16 ~~~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNLDPAv~~vpy~aniDIRDtVkYkEvMkqY~LGPNGgI~TsL 95 (366)
T KOG1532|consen 16 IQRPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINLDPAVRNVPYPANIDIRDTVKYKEVMKQYQLGPNGGIVTSL 95 (366)
T ss_pred ccCCcEEEEEecCCCCchhHHHHHHHHHhhccCCCeEEeCCHHHhcCCCccCCchhhhhhHHHHHHHhCCCCCcchhhhH
Confidence 45788888888877764 466788888887755555544311 0000 001111 1122
Q ss_pred chHHHHHH---HHHHHHHHhcC-----CCCCEEEEEechhhHHHHH-HHHhcCC
Q 035721 111 NPVVEDAI---SFFDSFRARHA-----PDLPAFLYSESLGGAIALY-ITLRQKG 155 (308)
Q Consensus 111 ~~~~~d~~---~~l~~~~~~~~-----~~~~~~l~G~S~Gg~~a~~-~a~~~p~ 155 (308)
.-++--+. .+++....... -+.+|-++-||..|.|... +|..+|-
T Consensus 96 NLF~tk~dqv~~~iek~~~~~~~~liDTPGQIE~FtWSAsGsIIte~lass~pt 149 (366)
T KOG1532|consen 96 NLFATKFDQVIELIEKRAEEFDYVLIDTPGQIEAFTWSASGSIITETLASSFPT 149 (366)
T ss_pred HHHHHHHHHHHHHHHHhhcccCEEEEcCCCceEEEEecCCccchHhhHhhcCCe
Confidence 22333333 44443333311 4668889999998887765 4555663
No 278
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=63.19 E-value=31 Score=24.60 Aligned_cols=52 Identities=12% Similarity=0.082 Sum_probs=30.0
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEeCC
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILNGA 165 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 165 (308)
+...+++.++++.+.. .+.+|+++|-|..|..-+.++...++.+..++=.+|
T Consensus 51 ~~~~~~l~~~L~~~~~---~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 51 EQSKAELREFLEKLKA---EGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHHH---TT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHHH---cCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 3344556666666655 346899999999999989888877777888876655
No 279
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=63.17 E-value=50 Score=26.48 Aligned_cols=75 Identities=12% Similarity=0.098 Sum_probs=46.1
Q ss_pred eEEEEccCCCccchHHHHHHHHHHHcCCeEEEec----CCCC--cCCCC----------------ccccCCCcchHHHHH
Q 035721 60 VLCVVHGFTGESSWIVQLTAVLFAKSGFATCAID----HQGH--GFSDG----------------LVAHIPDLNPVVEDA 117 (308)
Q Consensus 60 ~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d----~~G~--G~s~~----------------~~~~~~~~~~~~~d~ 117 (308)
.||++-|-.+++. ..++-.|++++-.++..| ++|. |...+ .+...++..++.++.
T Consensus 5 ~ii~I~GpTasGK---S~LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~a 81 (300)
T PRK14729 5 KIVFIFGPTAVGK---SNILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKEA 81 (300)
T ss_pred cEEEEECCCccCH---HHHHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHHH
Confidence 3777777766655 245556666555899988 4443 21111 222345777888999
Q ss_pred HHHHHHHHHhcCCCCCEEEEEec
Q 035721 118 ISFFDSFRARHAPDLPAFLYSES 140 (308)
Q Consensus 118 ~~~l~~~~~~~~~~~~~~l~G~S 140 (308)
...++.+... + ...+|+|-|
T Consensus 82 ~~~i~~i~~~--g-k~PilvGGT 101 (300)
T PRK14729 82 LKIIKELRQQ--K-KIPIFVGGS 101 (300)
T ss_pred HHHHHHHHHC--C-CCEEEEeCc
Confidence 9999887665 2 244666654
No 280
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=62.87 E-value=12 Score=24.72 Aligned_cols=31 Identities=23% Similarity=0.424 Sum_probs=24.5
Q ss_pred EEEEccCCCccchHHHHHHHHHHHc-CCeEEEecC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKS-GFATCAIDH 94 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~ 94 (308)
+|++.|.++++. ..+++.|+++ |+.++..|-
T Consensus 1 vI~I~G~~gsGK---ST~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGK---STLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSH---HHHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCH---HHHHHHHHHHHCCeEEEecc
Confidence 688899888876 3567777776 899999887
No 281
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=60.56 E-value=17 Score=26.17 Aligned_cols=22 Identities=14% Similarity=0.197 Sum_probs=19.0
Q ss_pred CEEEEEechhhHHHHHHHHhcC
Q 035721 133 PAFLYSESLGGAIALYITLRQK 154 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~~p 154 (308)
.-.+.|-|.|+.++..++...+
T Consensus 27 ~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 27 IDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred CCEEEEECHHHHHHHHHHcCCC
Confidence 6689999999999999987654
No 282
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=59.38 E-value=12 Score=30.56 Aligned_cols=43 Identities=9% Similarity=0.139 Sum_probs=33.4
Q ss_pred cccccceeEEcCCCcEEEEEEecCCCC-------CCCcceEEEEccCCCc
Q 035721 28 SVSHSSEYITNSRGLRLFTQWWTPLPP-------AKTLGVLCVVHGFTGE 70 (308)
Q Consensus 28 ~~~~~~~~~~~~~g~~l~~~~~~~~~~-------~~~~~~vv~~hG~~~~ 70 (308)
..+++.......||.++-|..|+++++ +-+||+|.++|-+.+.
T Consensus 448 q~pFEkLkmSsDDG~r~LyLDFGg~dGEiqLDLhscpKpiVFIlHsfLSA 497 (506)
T KOG3551|consen 448 QHPFEKLKMSSDDGARMLYLDFGGPDGEIQLDLHSCPKPIVFILHSFLSA 497 (506)
T ss_pred hChHHHhccccCCCceEEEEecCCCCccEEeeeccCCCcEEEEehhhhhh
Confidence 456677778888999999999997664 2468999999987654
No 283
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=59.35 E-value=69 Score=23.75 Aligned_cols=72 Identities=22% Similarity=0.257 Sum_probs=40.4
Q ss_pred HHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc-C-
Q 035721 77 LTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ-K- 154 (308)
Q Consensus 77 ~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p- 154 (308)
...+.+.+++++++.+|-+|... .-.+..+++..+++.+... .++++=-+..+.-.+..+..+ .
T Consensus 74 ~~l~~~~~~~~D~vlIDT~Gr~~---------~d~~~~~el~~~~~~~~~~-----~~~LVlsa~~~~~~~~~~~~~~~~ 139 (196)
T PF00448_consen 74 EALEKFRKKGYDLVLIDTAGRSP---------RDEELLEELKKLLEALNPD-----EVHLVLSATMGQEDLEQALAFYEA 139 (196)
T ss_dssp HHHHHHHHTTSSEEEEEE-SSSS---------THHHHHHHHHHHHHHHSSS-----EEEEEEEGGGGGHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCEEEEecCCcch---------hhHHHHHHHHHHhhhcCCc-----cceEEEecccChHHHHHHHHHhhc
Confidence 34455666789999999987653 2234456666666665322 555544444444444333332 2
Q ss_pred CCccEEEE
Q 035721 155 GAWDGLIL 162 (308)
Q Consensus 155 ~~v~~~vl 162 (308)
-.+.++|+
T Consensus 140 ~~~~~lIl 147 (196)
T PF00448_consen 140 FGIDGLIL 147 (196)
T ss_dssp SSTCEEEE
T ss_pred ccCceEEE
Confidence 24788885
No 284
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=58.56 E-value=20 Score=26.26 Aligned_cols=33 Identities=15% Similarity=0.107 Sum_probs=22.8
Q ss_pred HHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc
Q 035721 119 SFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 119 ~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
.+++.+... +...-.++|-|.||.+|..++...
T Consensus 16 Gvl~~L~e~--~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 16 GALKALEEA--GILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHHc--CCCcceEEEECHHHHHHHHHHcCC
Confidence 344444433 223568999999999999998753
No 285
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=58.34 E-value=44 Score=24.33 Aligned_cols=29 Identities=31% Similarity=0.466 Sum_probs=15.9
Q ss_pred CcchHHHHHHHHHHHHHHhcCCCCCEEEEE
Q 035721 109 DLNPVVEDAISFFDSFRARHAPDLPAFLYS 138 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G 138 (308)
+.+++.+-+..+++.++... +..+|+++-
T Consensus 72 ~~~~~~~~~~~fv~~iR~~h-P~tPIllv~ 100 (178)
T PF14606_consen 72 SPEEFRERLDGFVKTIREAH-PDTPILLVS 100 (178)
T ss_dssp CTTTHHHHHHHHHHHHHTT--SSS-EEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhC-CCCCEEEEe
Confidence 55566666777777666653 334444443
No 286
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=58.08 E-value=1.1 Score=35.36 Aligned_cols=107 Identities=20% Similarity=0.101 Sum_probs=59.1
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLY 137 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~ 137 (308)
...++..||...+...........+...++.++..|+++++.+....... ....-..+...++....... ...++.++
T Consensus 88 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 165 (299)
T COG1073 88 GESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILA-GLSLGGPSAGALLAWGPTRL-DASRIVVW 165 (299)
T ss_pred cccccccccccCccccccccchhheeeeccccccHHHHHHhhhcCcceEE-EEEeeccchHHHhhcchhHH-Hhhcccce
Confidence 44577888875444422223334444557899999999999886433211 11111122222222221000 22389999
Q ss_pred EechhhHHHHHHHHh----cCCCccEEEEeCCc
Q 035721 138 SESLGGAIALYITLR----QKGAWDGLILNGAM 166 (308)
Q Consensus 138 G~S~Gg~~a~~~a~~----~p~~v~~~vl~~~~ 166 (308)
|.|+||..++..... .++.+..++.-++.
T Consensus 166 g~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (299)
T COG1073 166 GESLGGALALLLLGANPELARELIDYLITPGGF 198 (299)
T ss_pred eeccCceeeccccccchHHHHhhhhhhccCCCC
Confidence 999999998876654 23445555544443
No 287
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=57.73 E-value=38 Score=25.22 Aligned_cols=42 Identities=14% Similarity=0.070 Sum_probs=28.4
Q ss_pred CcceEEEEccCCCccc--hHHHHHHHHHHHcCCeEEEecCCCCc
Q 035721 57 TLGVLCVVHGFTGESS--WIVQLTAVLFAKSGFATCAIDHQGHG 98 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G 98 (308)
.+++++++||.....- ..-..+.+.|.+.|..+...-+++.|
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~g 186 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEG 186 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-S
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCC
Confidence 3688999999765432 12346788888888877766666544
No 288
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=57.60 E-value=63 Score=24.41 Aligned_cols=38 Identities=11% Similarity=0.038 Sum_probs=24.0
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCe-EEEecCC
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFA-TCAIDHQ 95 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~-v~~~d~~ 95 (308)
.+.|++++-.+.....+.+.+.+.|.+.|.. +..++..
T Consensus 29 ~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~v~~~~~~ 67 (217)
T cd03145 29 GARIVVIPAASEEPAEVGEEYRDVFERLGAREVEVLVID 67 (217)
T ss_pred CCcEEEEeCCCcChhHHHHHHHHHHHHcCCceeEEeccC
Confidence 4567777665555444556677778777874 5556554
No 289
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=56.99 E-value=8.2 Score=31.11 Aligned_cols=21 Identities=29% Similarity=0.172 Sum_probs=16.7
Q ss_pred CCCEEEEEechhhHHHHHHHH
Q 035721 131 DLPAFLYSESLGGAIALYITL 151 (308)
Q Consensus 131 ~~~~~l~G~S~Gg~~a~~~a~ 151 (308)
..+-.++|||+|=+.|+.++.
T Consensus 83 i~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 83 IKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HCESEEEESTTHHHHHHHHTT
T ss_pred cccceeeccchhhHHHHHHCC
Confidence 348889999999988876654
No 290
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=56.12 E-value=18 Score=28.22 Aligned_cols=38 Identities=8% Similarity=0.091 Sum_probs=30.2
Q ss_pred cceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCC
Q 035721 58 LGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.|+||++.|+.+.+. .....+...|-.+|++|.++.-|
T Consensus 55 ~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 55 RSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 589999999977654 34567888888889999999655
No 291
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=55.74 E-value=8.4 Score=27.31 Aligned_cols=53 Identities=15% Similarity=0.088 Sum_probs=27.0
Q ss_pred ecCCCCcCCCCccc--cCCCcchHHHHHHHHHHHHHHhcC---CCCCEEEEEechhhH
Q 035721 92 IDHQGHGFSDGLVA--HIPDLNPVVEDAISFFDSFRARHA---PDLPAFLYSESLGGA 144 (308)
Q Consensus 92 ~d~~G~G~s~~~~~--~~~~~~~~~~d~~~~l~~~~~~~~---~~~~~~l~G~S~Gg~ 144 (308)
+-+-|||....... ..++..+++.-+..+-+.+..... .+.+|.++|.|++..
T Consensus 59 w~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 59 WQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 34457776621111 112445555555444466665432 567999999999887
No 292
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=55.60 E-value=28 Score=26.41 Aligned_cols=21 Identities=14% Similarity=0.165 Sum_probs=18.0
Q ss_pred CEEEEEechhhHHHHHHHHhc
Q 035721 133 PAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
.-.+.|-|.|+.++..++...
T Consensus 29 ~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 29 PSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred ceEEEEeCHHHHHHHHHHcCC
Confidence 557999999999999998754
No 293
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=55.15 E-value=72 Score=24.71 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=24.1
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQG 96 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 96 (308)
++++-|..+.-. ..+++.|.++|+.|+..+...
T Consensus 11 ~vlItG~s~gIG---~~la~~l~~~G~~v~~~~~~~ 43 (266)
T PRK06171 11 IIIVTGGSSGIG---LAIVKELLANGANVVNADIHG 43 (266)
T ss_pred EEEEeCCCChHH---HHHHHHHHHCCCEEEEEeCCc
Confidence 566667554333 578899999999999988654
No 294
>PLN02748 tRNA dimethylallyltransferase
Probab=55.15 E-value=64 Score=27.80 Aligned_cols=78 Identities=15% Similarity=0.075 Sum_probs=47.8
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHc-CCeEEEec----CCCC--cCCC----------------CccccCCCcchH
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKS-GFATCAID----HQGH--GFSD----------------GLVAHIPDLNPV 113 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d----~~G~--G~s~----------------~~~~~~~~~~~~ 113 (308)
.++.+|+|-|-.+++. ..++..|+.+ +..++..| |+|. |... ..+...++..++
T Consensus 20 ~~~~~i~i~GptgsGK---s~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~F 96 (468)
T PLN02748 20 GKAKVVVVMGPTGSGK---SKLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKDF 96 (468)
T ss_pred CCCCEEEEECCCCCCH---HHHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHHH
Confidence 3556788888776665 2455556554 56788888 3443 1111 122234678888
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEec
Q 035721 114 VEDAISFFDSFRARHAPDLPAFLYSES 140 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~~~~~~~l~G~S 140 (308)
.++...+|+.+..+ +. ..+|+|-|
T Consensus 97 ~~~A~~~I~~I~~r--gk-~PIlVGGT 120 (468)
T PLN02748 97 RDHAVPLIEEILSR--NG-LPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHHHhc--CC-CeEEEcCh
Confidence 89999999988775 22 44556544
No 295
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=54.89 E-value=24 Score=28.30 Aligned_cols=21 Identities=14% Similarity=0.156 Sum_probs=18.2
Q ss_pred CEEEEEechhhHHHHHHHHhc
Q 035721 133 PAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
.-.++|-|+|+.++..++...
T Consensus 44 ~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 44 VDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred CCEEEEECHHHHHHHHHHcCC
Confidence 557899999999999998764
No 296
>PRK14974 cell division protein FtsY; Provisional
Probab=54.75 E-value=1.2e+02 Score=24.90 Aligned_cols=65 Identities=17% Similarity=0.206 Sum_probs=36.0
Q ss_pred HcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcC--CCccEEE
Q 035721 84 KSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQK--GAWDGLI 161 (308)
Q Consensus 84 ~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p--~~v~~~v 161 (308)
..|+.++.+|-.|.... -....+.+..+.+.+.. ..++++.-+.-|.-+...+..+. -.+.++|
T Consensus 220 ~~~~DvVLIDTaGr~~~---------~~~lm~eL~~i~~~~~p-----d~~iLVl~a~~g~d~~~~a~~f~~~~~~~giI 285 (336)
T PRK14974 220 ARGIDVVLIDTAGRMHT---------DANLMDELKKIVRVTKP-----DLVIFVGDALAGNDAVEQAREFNEAVGIDGVI 285 (336)
T ss_pred hCCCCEEEEECCCccCC---------cHHHHHHHHHHHHhhCC-----ceEEEeeccccchhHHHHHHHHHhcCCCCEEE
Confidence 45788888888765431 22334445444443322 25566666666666665555442 2466777
Q ss_pred E
Q 035721 162 L 162 (308)
Q Consensus 162 l 162 (308)
+
T Consensus 286 l 286 (336)
T PRK14974 286 L 286 (336)
T ss_pred E
Confidence 5
No 297
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=54.63 E-value=30 Score=30.51 Aligned_cols=38 Identities=24% Similarity=0.310 Sum_probs=29.4
Q ss_pred CEEEEEechhhHHHHHHHHhcC-CCccEEEEeCCcCCCC
Q 035721 133 PAFLYSESLGGAIALYITLRQK-GAWDGLILNGAMCGIS 170 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~~p-~~v~~~vl~~~~~~~~ 170 (308)
.++.-+.|-||..++..+.+.. ..|++++...|...+.
T Consensus 286 ~VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~~ 324 (690)
T PF10605_consen 286 LVIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNLP 324 (690)
T ss_pred EEEEEeecCccHHHHhHhhcccCCceeeEEecCCccCCC
Confidence 3566688999999999998765 4689999888765543
No 298
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=54.30 E-value=85 Score=23.08 Aligned_cols=92 Identities=9% Similarity=0.078 Sum_probs=50.1
Q ss_pred EEEEccCCCccc---hHHHHHHHHHHHcCCeEEEecCCC-CcCCCC----------ccccCCCcchHHHHHHHHHHHHHH
Q 035721 61 LCVVHGFTGESS---WIVQLTAVLFAKSGFATCAIDHQG-HGFSDG----------LVAHIPDLNPVVEDAISFFDSFRA 126 (308)
Q Consensus 61 vv~~hG~~~~~~---~~~~~~~~~l~~~g~~v~~~d~~G-~G~s~~----------~~~~~~~~~~~~~d~~~~l~~~~~ 126 (308)
||=..|.+.... .+.+.+...|.++|+.|.++=... ++.... +.......+.+.-|+.+++..+..
T Consensus 6 IiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~~~~y~gv~l~~i~~~~~g~~~si~yd~~sl~~al~~ 85 (185)
T PF09314_consen 6 IIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYKEFEYNGVRLVYIPAPKNGSAESIIYDFLSLLHALRF 85 (185)
T ss_pred EEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCCCcccCCeEEEEeCCCCCCchHHHHHHHHHHHHHHHH
Confidence 444556554433 244567777777778766654332 222211 111112356777888888887742
Q ss_pred h-cC--CCCCEEEEEechhhHHHHHHHHh
Q 035721 127 R-HA--PDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 127 ~-~~--~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
. .. ...-+.++|.+.|+.+...+-..
T Consensus 86 ~~~~~~~~~ii~ilg~~~g~~~~~~~r~~ 114 (185)
T PF09314_consen 86 IKQDKIKYDIILILGYGIGPFFLPFLRKL 114 (185)
T ss_pred HhhccccCCEEEEEcCCccHHHHHHHHhh
Confidence 2 10 12236678999888877655443
No 299
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=54.01 E-value=63 Score=26.05 Aligned_cols=67 Identities=19% Similarity=0.133 Sum_probs=38.3
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHc-CCeEEEecCC----C--CcCCCC----------------ccccCCCcchHH
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKS-GFATCAIDHQ----G--HGFSDG----------------LVAHIPDLNPVV 114 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~----G--~G~s~~----------------~~~~~~~~~~~~ 114 (308)
.+.+|++-|-.+++. ..++..|++. +..++..|-. + .|...+ .+...++..++.
T Consensus 3 ~~~~i~i~GptgsGK---t~la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f~ 79 (307)
T PRK00091 3 KPKVIVIVGPTASGK---TALAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADFQ 79 (307)
T ss_pred CceEEEEECCCCcCH---HHHHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHHH
Confidence 345788888776665 3456666554 5677777752 1 111111 111224566777
Q ss_pred HHHHHHHHHHHHh
Q 035721 115 EDAISFFDSFRAR 127 (308)
Q Consensus 115 ~d~~~~l~~~~~~ 127 (308)
++....++.+...
T Consensus 80 ~~a~~~i~~i~~~ 92 (307)
T PRK00091 80 RDALAAIADILAR 92 (307)
T ss_pred HHHHHHHHHHHhC
Confidence 7777888776554
No 300
>PRK10279 hypothetical protein; Provisional
Probab=53.96 E-value=21 Score=28.59 Aligned_cols=32 Identities=6% Similarity=0.046 Sum_probs=22.6
Q ss_pred HHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc
Q 035721 120 FFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 120 ~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
+++.+... +-..-.+.|-|+|+.++..+|...
T Consensus 23 VL~aL~E~--gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 23 VINALKKV--GIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHc--CCCcCEEEEEcHHHHHHHHHHcCC
Confidence 34444433 333678999999999999998754
No 301
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=53.51 E-value=12 Score=29.74 Aligned_cols=21 Identities=29% Similarity=0.320 Sum_probs=16.9
Q ss_pred CCCEEEEEechhhHHHHHHHH
Q 035721 131 DLPAFLYSESLGGAIALYITL 151 (308)
Q Consensus 131 ~~~~~l~G~S~Gg~~a~~~a~ 151 (308)
-.+-.++|||+|-+.|+.++.
T Consensus 81 i~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 81 VRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred CcccEEEecCHHHHHHHHHhC
Confidence 347789999999998876664
No 302
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=52.83 E-value=58 Score=24.42 Aligned_cols=58 Identities=16% Similarity=0.139 Sum_probs=34.9
Q ss_pred cceEEEEccCCCccc--hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHH
Q 035721 58 LGVLCVVHGFTGESS--WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDS 123 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~ 123 (308)
+.+|+++||-....- ...+...+.|.+.|.+|-.-.++|.|-+ ...+...++.++++.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~--------i~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHE--------ISPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCC--------CCHHHHHHHHHHHhh
Confidence 457999999876542 2345778888888888888887765543 223345566666543
No 303
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]
Probab=52.76 E-value=95 Score=25.95 Aligned_cols=74 Identities=14% Similarity=0.140 Sum_probs=46.3
Q ss_pred eEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEe
Q 035721 60 VLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSE 139 (308)
Q Consensus 60 ~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~ 139 (308)
.|+..--++.+ +...+.+++.|.+.|..|..+++.- .|..++++.+... +-+++|-
T Consensus 250 ~l~Y~smyg~T-~~ma~aiaegl~~~gv~v~~~~~~~------------------~~~~eI~~~i~~a-----~~~vvGs 305 (388)
T COG0426 250 DLIYDSMYGNT-EKMAQAIAEGLMKEGVDVEVINLED------------------ADPSEIVEEILDA-----KGLVVGS 305 (388)
T ss_pred EEEEecccCCH-HHHHHHHHHHhhhcCCceEEEEccc------------------CCHHHHHHHHhhc-----ceEEEec
Confidence 33343344433 3366789999999999999998741 1344444444444 8889998
Q ss_pred c---------hhhHHHHHHHHhcCCCc
Q 035721 140 S---------LGGAIALYITLRQKGAW 157 (308)
Q Consensus 140 S---------~Gg~~a~~~a~~~p~~v 157 (308)
+ ++..+....+...+.+.
T Consensus 306 PT~~~~~~p~i~~~l~~v~~~~~~~k~ 332 (388)
T COG0426 306 PTINGGAHPPIQTALGYVLALAPKNKL 332 (388)
T ss_pred CcccCCCCchHHHHHHHHHhccCcCce
Confidence 8 45555555666666544
No 304
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=52.28 E-value=46 Score=26.19 Aligned_cols=39 Identities=13% Similarity=0.159 Sum_probs=24.1
Q ss_pred eEEEEccCCCccch-HHHHHHHHHHHcCCeEEEecCCCCc
Q 035721 60 VLCVVHGFTGESSW-IVQLTAVLFAKSGFATCAIDHQGHG 98 (308)
Q Consensus 60 ~vv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G 98 (308)
++|++-|+++++.. ....+.+.|.+.++.|+.++--..+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 47889999988763 3457778888888999888855444
No 305
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=52.20 E-value=82 Score=23.49 Aligned_cols=33 Identities=27% Similarity=0.290 Sum_probs=24.2
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQG 96 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 96 (308)
+..+.|.+.. .-+.++..|+++|++|++.|+.-
T Consensus 16 ~~~vtGg~sG---IGrAia~~la~~Garv~v~dl~~ 48 (256)
T KOG1200|consen 16 VAAVTGGSSG---IGRAIAQLLAKKGARVAVADLDS 48 (256)
T ss_pred eeEEecCCch---HHHHHHHHHHhcCcEEEEeecch
Confidence 5555564433 23688999999999999999764
No 306
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=51.94 E-value=44 Score=23.16 Aligned_cols=41 Identities=17% Similarity=0.300 Sum_probs=26.5
Q ss_pred EEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCC
Q 035721 61 LCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSD 101 (308)
Q Consensus 61 vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 101 (308)
+|.+-|..+++. ...+.+++.|.++||+|.++=.-+||...
T Consensus 2 vv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~ 43 (140)
T PF03205_consen 2 VVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFE 43 (140)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcc
Confidence 566666654443 45678899999999999977666666543
No 307
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=51.32 E-value=55 Score=25.85 Aligned_cols=31 Identities=13% Similarity=0.249 Sum_probs=23.9
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.-|.|+|.-|.+ ...+.|+..||.|+..|+-
T Consensus 251 ~vPmi~fakG~g--------~~Le~l~~tG~DVvgLDWT 281 (359)
T KOG2872|consen 251 PVPMILFAKGSG--------GALEELAQTGYDVVGLDWT 281 (359)
T ss_pred CCceEEEEcCcc--------hHHHHHHhcCCcEEeeccc
Confidence 357888888854 2456788899999999974
No 308
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=51.24 E-value=23 Score=26.98 Aligned_cols=71 Identities=10% Similarity=0.040 Sum_probs=45.3
Q ss_pred cceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHH-HHHHHHHHHHhcCCCCCEE
Q 035721 58 LGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVED-AISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d-~~~~l~~~~~~~~~~~~~~ 135 (308)
.|+||++.|+.+.+. .....+...|-.+|+.|.++.-| +-++...+ +-.+-+.+- ....+.
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p-------------t~eE~~~p~lwRfw~~lP----~~G~i~ 92 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP-------------SDRERTQWYFQRYVQHLP----AAGEIV 92 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC-------------CHHHHcChHHHHHHHhCC----CCCeEE
Confidence 689999999977654 34567788888889999998765 22222222 223333332 445888
Q ss_pred EEEechhhHH
Q 035721 136 LYSESLGGAI 145 (308)
Q Consensus 136 l~G~S~Gg~~ 145 (308)
|+=-|+=+-+
T Consensus 93 IF~rSwY~~~ 102 (230)
T TIGR03707 93 LFDRSWYNRA 102 (230)
T ss_pred EEeCchhhhH
Confidence 8888875553
No 309
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=50.71 E-value=27 Score=26.27 Aligned_cols=22 Identities=18% Similarity=0.256 Sum_probs=19.2
Q ss_pred CEEEEEechhhHHHHHHHHhcC
Q 035721 133 PAFLYSESLGGAIALYITLRQK 154 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~~p 154 (308)
.-.+.|.|.|+.+|..++...+
T Consensus 27 ~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 27 PDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred CCEEEEECHHHHHHHHHHcCCc
Confidence 5579999999999999998764
No 310
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=50.49 E-value=49 Score=22.52 Aligned_cols=15 Identities=7% Similarity=0.175 Sum_probs=11.5
Q ss_pred HHHHHHHcCCeEEEe
Q 035721 78 TAVLFAKSGFATCAI 92 (308)
Q Consensus 78 ~~~~l~~~g~~v~~~ 92 (308)
....|.+.|++|+++
T Consensus 100 ~~~~L~~~GwrvlvV 114 (150)
T COG3727 100 DIKRLQQLGWRVLVV 114 (150)
T ss_pred HHHHHHHcCCeEEEE
Confidence 356788889998875
No 311
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=49.95 E-value=28 Score=27.68 Aligned_cols=22 Identities=18% Similarity=0.073 Sum_probs=17.6
Q ss_pred CCCCEEEEEechhhHHHHHHHH
Q 035721 130 PDLPAFLYSESLGGAIALYITL 151 (308)
Q Consensus 130 ~~~~~~l~G~S~Gg~~a~~~a~ 151 (308)
+..+..++|||+|=..|+.++.
T Consensus 74 g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 74 LPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred CCCCcEEeecCHHHHHHHHHhC
Confidence 4458899999999988877664
No 312
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=49.29 E-value=34 Score=24.66 Aligned_cols=22 Identities=9% Similarity=0.145 Sum_probs=18.5
Q ss_pred CEEEEEechhhHHHHHHHHhcC
Q 035721 133 PAFLYSESLGGAIALYITLRQK 154 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~~p 154 (308)
.-.+.|-|.|+.++..++....
T Consensus 29 ~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 29 IDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred eeEEEEeCHHHHHHHHHHcCCC
Confidence 5579999999999999887654
No 313
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=49.27 E-value=16 Score=28.60 Aligned_cols=21 Identities=10% Similarity=0.014 Sum_probs=17.8
Q ss_pred CEEEEEechhhHHHHHHHHhc
Q 035721 133 PAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
.=.+.|-|+|+.++..+|...
T Consensus 39 ~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 39 IDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred ccEEEEECHHHHHHHHHHcCC
Confidence 456899999999999998763
No 314
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=48.91 E-value=29 Score=27.89 Aligned_cols=33 Identities=9% Similarity=0.049 Sum_probs=23.7
Q ss_pred HHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc
Q 035721 119 SFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 119 ~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
-+++.|... +-..-.|.|-|+|+.++..+|...
T Consensus 28 GVl~aL~e~--gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 28 GVLKALEEA--GIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHHc--CCCccEEEecCHHHHHHHHHHcCC
Confidence 344444443 334778999999999999998854
No 315
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=48.77 E-value=88 Score=26.96 Aligned_cols=86 Identities=15% Similarity=0.197 Sum_probs=47.7
Q ss_pred EEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechh
Q 035721 63 VVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLG 142 (308)
Q Consensus 63 ~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~G 142 (308)
|--|++.+.......-+++-..+||.|+.+|-.|.-. +-..+...+..+++.- .+..|+.+|.-+=
T Consensus 443 fekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~---------~~~~lm~~l~k~~~~~-----~pd~i~~vgealv 508 (587)
T KOG0781|consen 443 FEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMH---------NNAPLMTSLAKLIKVN-----KPDLILFVGEALV 508 (587)
T ss_pred HhhhcCCChHHHHHHHHHHHHhcCCCEEEEecccccc---------CChhHHHHHHHHHhcC-----CCceEEEehhhhh
Confidence 3345555544233334555566799999999876432 2222233344443322 4458888998877
Q ss_pred hHHHHHHHHhc---------CCCccEEEE
Q 035721 143 GAIALYITLRQ---------KGAWDGLIL 162 (308)
Q Consensus 143 g~~a~~~a~~~---------p~~v~~~vl 162 (308)
|.=++.-+..+ |..++++++
T Consensus 509 g~dsv~q~~~fn~al~~~~~~r~id~~~l 537 (587)
T KOG0781|consen 509 GNDSVDQLKKFNRALADHSTPRLIDGILL 537 (587)
T ss_pred CcHHHHHHHHHHHHHhcCCCccccceEEE
Confidence 77665433322 334667665
No 316
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=48.62 E-value=37 Score=24.40 Aligned_cols=34 Identities=12% Similarity=0.055 Sum_probs=24.2
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEE
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCA 91 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~ 91 (308)
..+.|+++-|-+.+...- -..+++|..+|+.|.+
T Consensus 24 ~~~~v~il~G~GnNGgDg-l~~AR~L~~~G~~V~v 57 (169)
T PF03853_consen 24 KGPRVLILCGPGNNGGDG-LVAARHLANRGYNVTV 57 (169)
T ss_dssp TT-EEEEEE-SSHHHHHH-HHHHHHHHHTTCEEEE
T ss_pred CCCeEEEEECCCCChHHH-HHHHHHHHHCCCeEEE
Confidence 356788888877666533 3678999999999888
No 317
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=48.04 E-value=42 Score=25.30 Aligned_cols=36 Identities=17% Similarity=0.177 Sum_probs=25.1
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+.+|++-|-...+- - ..++..|+++||.|++--.+
T Consensus 6 ~~k~VlItgcs~GGI-G-~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGI-G-YALAKEFARNGYLVYATARR 41 (289)
T ss_pred CCCeEEEeecCCcch-h-HHHHHHHHhCCeEEEEEccc
Confidence 455677766443322 2 47899999999999998655
No 318
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=47.61 E-value=44 Score=24.03 Aligned_cols=21 Identities=10% Similarity=0.066 Sum_probs=17.7
Q ss_pred CEEEEEechhhHHHHHHHHhc
Q 035721 133 PAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
.-.+.|-|.|+.+|..++...
T Consensus 29 ~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 29 IDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred eeEEEEECHHHHHHHHHHcCC
Confidence 457999999999999988653
No 319
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=46.94 E-value=38 Score=27.08 Aligned_cols=31 Identities=23% Similarity=0.350 Sum_probs=20.8
Q ss_pred CCcceEEEEccCCCccchHH-HHHHHHHHHcC
Q 035721 56 KTLGVLCVVHGFTGESSWIV-QLTAVLFAKSG 86 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~~~~~-~~~~~~l~~~g 86 (308)
+.+|.++=+||+.|++..|. +-+++.+...|
T Consensus 107 p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGKNYVAEIIAENLYRGG 138 (344)
T ss_pred CCCCeEEEecCCCCCchhHHHHHHHHHHHhcc
Confidence 56899999999999987443 23444444333
No 320
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=46.19 E-value=41 Score=24.48 Aligned_cols=34 Identities=26% Similarity=0.218 Sum_probs=22.4
Q ss_pred EEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCC
Q 035721 62 CVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 62 v~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+..+-||.+. ..-..++..|+.+|++|+.+|.=
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred EEEcCCCCccHHHHHHHHHhccccccccccccccC
Confidence 34444444443 23357889999999999999983
No 321
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=46.18 E-value=13 Score=28.33 Aligned_cols=38 Identities=16% Similarity=0.265 Sum_probs=26.8
Q ss_pred cceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCC
Q 035721 58 LGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.|+||++.|+.+++. .....+...|-.+|++|.++.-|
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 578999999987764 23456666677789999999865
No 322
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=45.80 E-value=29 Score=26.22 Aligned_cols=29 Identities=17% Similarity=0.218 Sum_probs=21.0
Q ss_pred eEEEEccCCCccchHHHHHHHHHHHcCCeEEEecC
Q 035721 60 VLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDH 94 (308)
Q Consensus 60 ~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 94 (308)
.=||++|-|-+.. +..|+++||+|+.+|+
T Consensus 39 ~rvLvPgCG~g~D------~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 39 GRVLVPGCGKGYD------MLWLAEQGHDVVGVDL 67 (218)
T ss_dssp EEEEETTTTTSCH------HHHHHHTTEEEEEEES
T ss_pred CeEEEeCCCChHH------HHHHHHCCCeEEEEec
Confidence 3577788664433 3457788999999997
No 323
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=45.59 E-value=18 Score=28.62 Aligned_cols=21 Identities=33% Similarity=0.229 Sum_probs=17.2
Q ss_pred CCCEEEEEechhhHHHHHHHH
Q 035721 131 DLPAFLYSESLGGAIALYITL 151 (308)
Q Consensus 131 ~~~~~l~G~S~Gg~~a~~~a~ 151 (308)
-.+-.++|||+|=+.|+.++.
T Consensus 82 i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred CCCCEEeecCHHHHHHHHHhC
Confidence 447899999999988877664
No 324
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=45.34 E-value=37 Score=26.55 Aligned_cols=22 Identities=23% Similarity=0.178 Sum_probs=18.6
Q ss_pred EEEEEechhhHHHHHHHHhcCC
Q 035721 134 AFLYSESLGGAIALYITLRQKG 155 (308)
Q Consensus 134 ~~l~G~S~Gg~~a~~~a~~~p~ 155 (308)
=.++|-|.|+.++..++.....
T Consensus 29 d~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 29 DLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred CEEEEECHHHHhHHHHHhCCcc
Confidence 3799999999999999887553
No 325
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=44.89 E-value=20 Score=30.27 Aligned_cols=36 Identities=14% Similarity=0.215 Sum_probs=24.8
Q ss_pred HHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCC
Q 035721 119 SFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGA 156 (308)
Q Consensus 119 ~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~ 156 (308)
.+++.+... +-.+-++.|-|.|+.+|..++...+++
T Consensus 90 GVLkaL~E~--gl~p~vIsGTSaGAivAal~as~~~ee 125 (421)
T cd07230 90 GVLKALFEA--NLLPRIISGSSAGSIVAAILCTHTDEE 125 (421)
T ss_pred HHHHHHHHc--CCCCCEEEEECHHHHHHHHHHcCCHHH
Confidence 344444433 333558999999999999999865544
No 326
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=44.75 E-value=1.1e+02 Score=27.56 Aligned_cols=64 Identities=13% Similarity=0.068 Sum_probs=38.6
Q ss_pred CcceEEEEccCCCccch--HHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHH
Q 035721 57 TLGVLCVVHGFTGESSW--IVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRA 126 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~ 126 (308)
-+.+++++||.....-. .-..+.+.|..+|..|-..-+|+-|-+-.. .+....-+..+++++..
T Consensus 550 i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~------~~~~~~~~~~~~~~~~~ 615 (620)
T COG1506 550 IKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR------PENRVKVLKEILDWFKR 615 (620)
T ss_pred cCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC------chhHHHHHHHHHHHHHH
Confidence 46789999997654321 124678888888988887777754433221 22234445555555443
No 327
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=44.71 E-value=53 Score=25.94 Aligned_cols=83 Identities=18% Similarity=0.201 Sum_probs=44.5
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCC-------eEEEecCCCCcCCCCccccCCCcchH--------HHHHHHHHHHHH
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGF-------ATCAIDHQGHGFSDGLVAHIPDLNPV--------VEDAISFFDSFR 125 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~-------~v~~~d~~G~G~s~~~~~~~~~~~~~--------~~d~~~~l~~~~ 125 (308)
-|++.|.|...-..-+.+...+...|. +++.+|..|.=..+...-. ..-..+ ..++.++++.++
T Consensus 27 ~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~-~~~~~~a~~~~~~~~~~L~e~i~~v~ 105 (279)
T cd05312 27 RILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLT-PFKKPFARKDEEKEGKSLLEVVKAVK 105 (279)
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcch-HHHHHHHhhcCcccCCCHHHHHHhcC
Confidence 455666554433234556666666677 8999999985332221100 000111 124445544433
Q ss_pred HhcCCCCCEEEEEech-hhHHHHHHHH
Q 035721 126 ARHAPDLPAFLYSESL-GGAIALYITL 151 (308)
Q Consensus 126 ~~~~~~~~~~l~G~S~-Gg~~a~~~a~ 151 (308)
+-+++|-|- ||.+.-....
T Consensus 106 -------ptvlIG~S~~~g~ft~evv~ 125 (279)
T cd05312 106 -------PTVLIGLSGVGGAFTEEVVR 125 (279)
T ss_pred -------CCEEEEeCCCCCCCCHHHHH
Confidence 669999995 7765544443
No 328
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=44.64 E-value=1.7e+02 Score=23.67 Aligned_cols=37 Identities=24% Similarity=0.243 Sum_probs=23.6
Q ss_pred eEEEEccCCCcc-chHHHHHHHHHHHcCCeEEEecCCC
Q 035721 60 VLCVVHGFTGES-SWIVQLTAVLFAKSGFATCAIDHQG 96 (308)
Q Consensus 60 ~vv~~hG~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G 96 (308)
++++++|.+.++ ......+++.|.++|+.|..+...+
T Consensus 2 il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 2 ILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 345556543222 2344578899988899988876544
No 329
>PRK06523 short chain dehydrogenase; Provisional
Probab=43.70 E-value=1.3e+02 Score=23.20 Aligned_cols=32 Identities=16% Similarity=0.108 Sum_probs=23.8
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|..+.-. ..+++.|.++|++|+..+..
T Consensus 11 ~vlItGas~gIG---~~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 11 RALVTGGTKGIG---AATVARLLEAGARVVTTARS 42 (260)
T ss_pred EEEEECCCCchh---HHHHHHHHHCCCEEEEEeCC
Confidence 567777554433 57888999999999998864
No 330
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=43.33 E-value=35 Score=25.62 Aligned_cols=35 Identities=11% Similarity=0.226 Sum_probs=27.7
Q ss_pred eEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecC
Q 035721 60 VLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDH 94 (308)
Q Consensus 60 ~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~ 94 (308)
++|++.|+++++. .+...+++.|.+++++|+...-
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 4788999988875 3456889999999999887754
No 331
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=43.16 E-value=45 Score=25.63 Aligned_cols=33 Identities=18% Similarity=0.243 Sum_probs=26.8
Q ss_pred eEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 60 VLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 60 ~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
-|+++-|..+. +-...++.|.+.|+.|+....|
T Consensus 7 kv~lITGASSG---iG~A~A~~l~~~G~~vvl~aRR 39 (246)
T COG4221 7 KVALITGASSG---IGEATARALAEAGAKVVLAARR 39 (246)
T ss_pred cEEEEecCcch---HHHHHHHHHHHCCCeEEEEecc
Confidence 48888886544 3368899999999999999876
No 332
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=43.12 E-value=2.1e+02 Score=24.44 Aligned_cols=73 Identities=14% Similarity=0.140 Sum_probs=48.1
Q ss_pred HHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCC
Q 035721 77 LTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGA 156 (308)
Q Consensus 77 ~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~ 156 (308)
.-.+.+.+.+|.|+.+|-.|.-. --+++.+++.++-+.+ .+..+.+|--++=|.-|...|..+.+.
T Consensus 173 ~al~~ak~~~~DvvIvDTAGRl~---------ide~Lm~El~~Ik~~~-----~P~E~llVvDam~GQdA~~~A~aF~e~ 238 (451)
T COG0541 173 AALEKAKEEGYDVVIVDTAGRLH---------IDEELMDELKEIKEVI-----NPDETLLVVDAMIGQDAVNTAKAFNEA 238 (451)
T ss_pred HHHHHHHHcCCCEEEEeCCCccc---------ccHHHHHHHHHHHhhc-----CCCeEEEEEecccchHHHHHHHHHhhh
Confidence 34455666788899998765321 1233344444443333 445889999999999999999887654
Q ss_pred --ccEEEEe
Q 035721 157 --WDGLILN 163 (308)
Q Consensus 157 --v~~~vl~ 163 (308)
+.++|+-
T Consensus 239 l~itGvIlT 247 (451)
T COG0541 239 LGITGVILT 247 (451)
T ss_pred cCCceEEEE
Confidence 6788874
No 333
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=42.82 E-value=30 Score=26.35 Aligned_cols=29 Identities=14% Similarity=0.328 Sum_probs=19.9
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
=||++|-|-+.. +..|+++||.|+.+|+-
T Consensus 46 rvLvPgCGkg~D------~~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 46 VCLIPMCGCSID------MLFFLSKGVKVIGIELS 74 (226)
T ss_pred eEEEeCCCChHH------HHHHHhCCCcEEEEecC
Confidence 466777543322 44678899999999973
No 334
>PTZ00445 p36-lilke protein; Provisional
Probab=42.32 E-value=1.4e+02 Score=22.55 Aligned_cols=65 Identities=15% Similarity=0.021 Sum_probs=39.1
Q ss_pred HHHHHHHHHHcCCeEEEecCCCC------cCCCCcc-ccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechh
Q 035721 75 VQLTAVLFAKSGFATCAIDHQGH------GFSDGLV-AHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLG 142 (308)
Q Consensus 75 ~~~~~~~l~~~g~~v~~~d~~G~------G~s~~~~-~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~G 142 (308)
-+.+.+.|.+.|..+++.|+-.. |.-..+. ....-......++..++..+.. .+-++.|+-+|--
T Consensus 31 ~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~---~~I~v~VVTfSd~ 102 (219)
T PTZ00445 31 ADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKN---SNIKISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHH---CCCeEEEEEccch
Confidence 46788899999999999997532 1111110 0000112234567777777765 3448999999854
No 335
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=41.92 E-value=89 Score=20.94 Aligned_cols=15 Identities=7% Similarity=0.180 Sum_probs=11.5
Q ss_pred HHHHHHHcCCeEEEe
Q 035721 78 TAVLFAKSGFATCAI 92 (308)
Q Consensus 78 ~~~~l~~~g~~v~~~ 92 (308)
....|.+.|+.|+.+
T Consensus 99 ~~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 99 VNSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHHCcCEEEEE
Confidence 345688889999876
No 336
>PLN02735 carbamoyl-phosphate synthase
Probab=41.56 E-value=1.3e+02 Score=29.47 Aligned_cols=101 Identities=11% Similarity=0.094 Sum_probs=49.0
Q ss_pred EEEEEEecCCCCC--CCcceEEEEccCCCc----cc--hHHHHHHHHHHHcCCeEEEecCCCCcCCCCc--cccCCCcch
Q 035721 43 RLFTQWWTPLPPA--KTLGVLCVVHGFTGE----SS--WIVQLTAVLFAKSGFATCAIDHQGHGFSDGL--VAHIPDLNP 112 (308)
Q Consensus 43 ~l~~~~~~~~~~~--~~~~~vv~~hG~~~~----~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~--~~~~~~~~~ 112 (308)
...|..|...+.. ..++-|+++-+.+.. .. +.--..+..|.+.|+.++++|.-..--|... .+..+...-
T Consensus 557 ~y~y~ty~~~~~~~~~~~kkvlilG~G~~~igq~iefd~~~v~~~~alr~~G~~tI~v~~npetvstd~~~aD~~y~~pl 636 (1102)
T PLN02735 557 PYMYSSYDGECESAPTNKKKVLILGGGPNRIGQGIEFDYCCCHASFALQDAGYETIMMNSNPETVSTDYDTSDRLYFEPL 636 (1102)
T ss_pred CcceeECCCCCCcccCCCceEEEeCccccccCcccccceeHHHHHHHHHHcCCeEEEEeCCCccccCCcccCCeEEEEeC
Confidence 4556666543321 234555555554321 11 1112567889899999999987543333211 011111122
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHH
Q 035721 113 VVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITL 151 (308)
Q Consensus 113 ~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 151 (308)
..+++.+++ ... ++..+=-++||-.++.++.
T Consensus 637 ~~e~vl~i~---~~e-----~~d~Vi~~~Ggq~~l~la~ 667 (1102)
T PLN02735 637 TVEDVLNVI---DLE-----RPDGIIVQFGGQTPLKLAL 667 (1102)
T ss_pred CHHHHHHHH---HHh-----CCCEEEECCCchHHHHHHH
Confidence 244444444 443 3333444577766665544
No 337
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=41.35 E-value=24 Score=28.47 Aligned_cols=19 Identities=26% Similarity=0.438 Sum_probs=16.5
Q ss_pred EEEEechhhHHHHHHHHhc
Q 035721 135 FLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~~ 153 (308)
.+.|-|.||.+|+.++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 5889999999999998754
No 338
>PRK00131 aroK shikimate kinase; Reviewed
Probab=41.19 E-value=44 Score=23.77 Aligned_cols=34 Identities=32% Similarity=0.470 Sum_probs=23.0
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHc-CCeEEEecC
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKS-GFATCAIDH 94 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~ 94 (308)
.+.+|++.|.+|++. ..++..|++. |+.++..|.
T Consensus 3 ~~~~i~l~G~~GsGK---stla~~La~~l~~~~~d~d~ 37 (175)
T PRK00131 3 KGPNIVLIGFMGAGK---STIGRLLAKRLGYDFIDTDH 37 (175)
T ss_pred CCCeEEEEcCCCCCH---HHHHHHHHHHhCCCEEEChH
Confidence 456889999888876 3456666554 677776653
No 339
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=41.03 E-value=2e+02 Score=23.56 Aligned_cols=94 Identities=11% Similarity=0.050 Sum_probs=54.1
Q ss_pred CcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEE
Q 035721 57 TLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAF 135 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~ 135 (308)
.+|.|+++=|..|.+. .....++..|.++|+.|+..-- .++... .+ +-++....+. .+-
T Consensus 137 ~~p~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~VllaA~-------------DTFRAa--Ai-EQL~~w~er~----gv~ 196 (340)
T COG0552 137 KKPFVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLAAG-------------DTFRAA--AI-EQLEVWGERL----GVP 196 (340)
T ss_pred CCcEEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEEec-------------chHHHH--HH-HHHHHHHHHh----CCe
Confidence 3688888888777654 2456899999999999987521 144422 22 2222222222 556
Q ss_pred EEEechhhHHH---HHHHHhcCCCccEEEEeCCcCCCC
Q 035721 136 LYSESLGGAIA---LYITLRQKGAWDGLILNGAMCGIS 170 (308)
Q Consensus 136 l~G~S~Gg~~a---~~~a~~~p~~v~~~vl~~~~~~~~ 170 (308)
++.|..|+=-| .-.......+=--++++++.....
T Consensus 197 vI~~~~G~DpAaVafDAi~~Akar~~DvvliDTAGRLh 234 (340)
T COG0552 197 VISGKEGADPAAVAFDAIQAAKARGIDVVLIDTAGRLH 234 (340)
T ss_pred EEccCCCCCcHHHHHHHHHHHHHcCCCEEEEeCccccc
Confidence 77766776543 222222222335577888876554
No 340
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=40.91 E-value=37 Score=22.55 Aligned_cols=22 Identities=27% Similarity=0.247 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHcCCeEEEecCC
Q 035721 74 IVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 74 ~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
++..+++.|+++|+.|++.|--
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEecc
Confidence 3457999999999999999964
No 341
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=40.89 E-value=1.3e+02 Score=21.81 Aligned_cols=54 Identities=11% Similarity=0.174 Sum_probs=36.6
Q ss_pred HHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechh
Q 035721 81 LFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLG 142 (308)
Q Consensus 81 ~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~G 142 (308)
.|.+.|++.+.+|.-+.=... .-.+...++.+.++.++... ...++.|+.-|.|
T Consensus 35 ~Lk~~Gik~li~DkDNTL~~~-------~~~~i~~~~~~~~~~l~~~~-~~~~v~IvSNsaG 88 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNTLTPP-------YEDEIPPEYAEWLNELKKQF-GKDRVLIVSNSAG 88 (168)
T ss_pred hhhhcCceEEEEcCCCCCCCC-------CcCcCCHHHHHHHHHHHHHC-CCCeEEEEECCCC
Confidence 388889999999986432111 22334456777777777663 3347999999986
No 342
>PRK12828 short chain dehydrogenase; Provisional
Probab=40.73 E-value=45 Score=25.15 Aligned_cols=31 Identities=23% Similarity=0.261 Sum_probs=23.4
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDH 94 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 94 (308)
.+++.|..+... ..+++.|.++|++|+.++.
T Consensus 9 ~vlItGatg~iG---~~la~~l~~~G~~v~~~~r 39 (239)
T PRK12828 9 VVAITGGFGGLG---RATAAWLAARGARVALIGR 39 (239)
T ss_pred EEEEECCCCcHh---HHHHHHHHHCCCeEEEEeC
Confidence 466677655433 5788889899999999986
No 343
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=40.48 E-value=1.1e+02 Score=20.30 Aligned_cols=55 Identities=22% Similarity=0.199 Sum_probs=33.3
Q ss_pred EEEccCCCccchHHHHHHHHHHHc-CCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHh
Q 035721 62 CVVHGFTGESSWIVQLTAVLFAKS-GFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRAR 127 (308)
Q Consensus 62 v~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~ 127 (308)
|++||-.|++.. .+++.+++. |+.++.+|..-...+ ...+..+.+..+++.....
T Consensus 1 ill~G~~G~GKT---~l~~~la~~l~~~~~~i~~~~~~~~--------~~~~~~~~i~~~~~~~~~~ 56 (132)
T PF00004_consen 1 ILLHGPPGTGKT---TLARALAQYLGFPFIEIDGSELISS--------YAGDSEQKIRDFFKKAKKS 56 (132)
T ss_dssp EEEESSTTSSHH---HHHHHHHHHTTSEEEEEETTHHHTS--------STTHHHHHHHHHHHHHHHT
T ss_pred CEEECcCCCCee---HHHHHHHhhcccccccccccccccc--------ccccccccccccccccccc
Confidence 688998888762 344444433 688888887644311 3344456666676665543
No 344
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=40.47 E-value=2e+02 Score=23.30 Aligned_cols=26 Identities=19% Similarity=0.273 Sum_probs=19.9
Q ss_pred HHHHHHHHcCCeEEEecCCCCcCCCC
Q 035721 77 LTAVLFAKSGFATCAIDHQGHGFSDG 102 (308)
Q Consensus 77 ~~~~~l~~~g~~v~~~d~~G~G~s~~ 102 (308)
..+..|.+.||.|+++|-...|....
T Consensus 15 Htv~~Ll~~G~~vvV~DNL~~g~~~~ 40 (329)
T COG1087 15 HTVRQLLKTGHEVVVLDNLSNGHKIA 40 (329)
T ss_pred HHHHHHHHCCCeEEEEecCCCCCHHH
Confidence 55677778999999999876665443
No 345
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=40.31 E-value=1e+02 Score=27.34 Aligned_cols=52 Identities=10% Similarity=0.093 Sum_probs=34.7
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEe------chhhHHHHHHHHhcCCCccEEEEeCCc
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSE------SLGGAIALYITLRQKGAWDGLILNGAM 166 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~------S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 166 (308)
..-++++..+++.+-.. ..+|+++|| |.|+.+++..-+...++ .+.++++|.
T Consensus 320 RvRaRvis~al~d~i~e---~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 320 RVRARVISTALSDIIKE---SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred HHHHHHHHHHHHHHHhh---cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 33456666666555442 349999999 79999998766555444 566666653
No 346
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=40.29 E-value=75 Score=18.96 Aligned_cols=32 Identities=19% Similarity=0.251 Sum_probs=18.2
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHH-cCCeEEEe
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAK-SGFATCAI 92 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~-~g~~v~~~ 92 (308)
.|.++++||...... +.++...+. +|+.++.+
T Consensus 31 ~~~~~lvhGga~~Ga---D~iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 31 HPDMVLVHGGAPKGA---DRIAARWARERGVPVIRF 63 (71)
T ss_pred CCCEEEEECCCCCCH---HHHHHHHHHHCCCeeEEe
Confidence 366889999652222 345555543 46766554
No 347
>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily. This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.
Probab=40.23 E-value=91 Score=20.24 Aligned_cols=33 Identities=15% Similarity=0.137 Sum_probs=19.5
Q ss_pred CcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEe
Q 035721 57 TLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAI 92 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~ 92 (308)
..++|+++.+..... -...+..|...||.|..+
T Consensus 64 ~~~vvvyc~~g~~~~---s~~~a~~l~~~G~~v~~l 96 (110)
T cd01521 64 EKLFVVYCDGPGCNG---ATKAALKLAELGFPVKEM 96 (110)
T ss_pred CCeEEEEECCCCCch---HHHHHHHHHHcCCeEEEe
Confidence 366777776532111 134566777889986654
No 348
>PRK09072 short chain dehydrogenase; Provisional
Probab=40.09 E-value=52 Score=25.49 Aligned_cols=32 Identities=19% Similarity=0.211 Sum_probs=23.5
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|..+.-. ..+++.|.++|+.|++++..
T Consensus 7 ~vlItG~s~~iG---~~ia~~l~~~G~~V~~~~r~ 38 (263)
T PRK09072 7 RVLLTGASGGIG---QALAEALAAAGARLLLVGRN 38 (263)
T ss_pred EEEEECCCchHH---HHHHHHHHHCCCEEEEEECC
Confidence 466667554332 57888999999999999854
No 349
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=39.84 E-value=1.4e+02 Score=22.00 Aligned_cols=38 Identities=18% Similarity=0.162 Sum_probs=20.2
Q ss_pred EEEecCCCCcCCCCccccC--CCcchHHHHHHHHHHHHHHh
Q 035721 89 TCAIDHQGHGFSDGLVAHI--PDLNPVVEDAISFFDSFRAR 127 (308)
Q Consensus 89 v~~~d~~G~G~s~~~~~~~--~~~~~~~~d~~~~l~~~~~~ 127 (308)
++++| ||||..++-.... ..-.++..++...+..+...
T Consensus 2 ~I~iD-pGHGg~d~GA~~~~g~~E~~~~l~ia~~l~~~L~~ 41 (189)
T TIGR02883 2 IIVID-PGHGGIDGGAVGKDGTLEKDITLEIALKLKDYLQE 41 (189)
T ss_pred EEEEe-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh
Confidence 67778 8999877532221 12224445555555444433
No 350
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=39.82 E-value=2.1e+02 Score=23.47 Aligned_cols=60 Identities=13% Similarity=-0.034 Sum_probs=34.1
Q ss_pred eEEcCCCcEEEEEEecCCCC-CCCcceEEEEccCCCccchHHHHHHHHHHHc--CCeEEEecCCC
Q 035721 35 YITNSRGLRLFTQWWTPLPP-AKTLGVLCVVHGFTGESSWIVQLTAVLFAKS--GFATCAIDHQG 96 (308)
Q Consensus 35 ~~~~~~g~~l~~~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G 96 (308)
.|..+.+-..+|...+++-- +..+++=+|+||.|.... . ..+.++|.++ +..|+.+|.-+
T Consensus 187 Qf~np~Np~~hy~ttg~EI~~q~~g~vDi~V~gaGTGGT-i-tgvGRylke~~~~~kVv~vdp~~ 249 (362)
T KOG1252|consen 187 QFHNPGNPLAHYETTGPEIWRQLDGKVDIFVAGAGTGGT-I-TGVGRYLKEQNPNIKVVGVDPQE 249 (362)
T ss_pred HhcCCCCcccccccccHHHHHHhcCCCCEEEeccCCCce-e-echhHHHHHhCCCCEEEEeCCCc
Confidence 44455555566655544210 112455688888765443 2 3566666665 57788888654
No 351
>PRK07933 thymidylate kinase; Validated
Probab=39.66 E-value=94 Score=23.40 Aligned_cols=40 Identities=15% Similarity=0.241 Sum_probs=28.9
Q ss_pred EEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcCC
Q 035721 61 LCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGFS 100 (308)
Q Consensus 61 vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s 100 (308)
+|.+=|.-+++. ...+.+.+.|..+|+.|+....|++|.+
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~ 42 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRS 42 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 355566555443 3456889999999999999999977644
No 352
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=39.51 E-value=26 Score=29.46 Aligned_cols=40 Identities=18% Similarity=0.211 Sum_probs=26.6
Q ss_pred HHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEE
Q 035721 119 SFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGL 160 (308)
Q Consensus 119 ~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~ 160 (308)
.+++.+... +-.+-++.|-|.|+.+|..++...++.+..+
T Consensus 84 GVlkaL~e~--gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 84 GVVKALLDA--DLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHHHhC--CCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 344444443 3336679999999999999998655544333
No 353
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=39.42 E-value=1.2e+02 Score=25.98 Aligned_cols=68 Identities=15% Similarity=0.163 Sum_probs=39.4
Q ss_pred HHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC--Ccc
Q 035721 81 LFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG--AWD 158 (308)
Q Consensus 81 ~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~ 158 (308)
.+...+|.++.+|-+|.-. .-+.+.+.+..+.+.. .+..++++--++-|.-+...+..+.+ .+.
T Consensus 177 ~~~~~~~DvViIDTaGr~~---------~d~~lm~El~~i~~~~-----~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~ 242 (429)
T TIGR01425 177 KFKKENFDIIIVDTSGRHK---------QEDSLFEEMLQVAEAI-----QPDNIIFVMDGSIGQAAEAQAKAFKDSVDVG 242 (429)
T ss_pred HHHhCCCCEEEEECCCCCc---------chHHHHHHHHHHhhhc-----CCcEEEEEeccccChhHHHHHHHHHhccCCc
Confidence 3444579999999987432 1222334444443322 23367777777767666666665532 467
Q ss_pred EEEE
Q 035721 159 GLIL 162 (308)
Q Consensus 159 ~~vl 162 (308)
++|+
T Consensus 243 g~Il 246 (429)
T TIGR01425 243 SVII 246 (429)
T ss_pred EEEE
Confidence 7776
No 354
>PRK08177 short chain dehydrogenase; Provisional
Probab=39.40 E-value=54 Score=24.62 Aligned_cols=33 Identities=9% Similarity=0.004 Sum_probs=23.5
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQG 96 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 96 (308)
.+++.|..+.-. ..+++.|.++|++|++++...
T Consensus 3 ~vlItG~sg~iG---~~la~~l~~~G~~V~~~~r~~ 35 (225)
T PRK08177 3 TALIIGASRGLG---LGLVDRLLERGWQVTATVRGP 35 (225)
T ss_pred EEEEeCCCchHH---HHHHHHHHhCCCEEEEEeCCC
Confidence 355666544333 568889999999999998754
No 355
>PRK07053 glutamine amidotransferase; Provisional
Probab=39.38 E-value=1.8e+02 Score=22.41 Aligned_cols=83 Identities=14% Similarity=0.135 Sum_probs=46.6
Q ss_pred ceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcC-C------C-----CccccCCC--cchHHHHHHHHHHHH
Q 035721 59 GVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGF-S------D-----GLVAHIPD--LNPVVEDAISFFDSF 124 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~-s------~-----~~~~~~~~--~~~~~~d~~~~l~~~ 124 (308)
+.+|+-|--..+.. .+.+.|.+.|+.+..++...-.. . + +.+...++ ...+..+..++++.+
T Consensus 4 ~ilviqh~~~e~~g----~i~~~L~~~g~~~~v~~~~~~~~~~~~~~~~d~lii~Ggp~~~~d~~~~p~~~~~~~~i~~~ 79 (234)
T PRK07053 4 TAVAIRHVAFEDLG----SFEQVLGARGYRVRYVDVGVDDLETLDALEPDLLVVLGGPIGVYDDELYPFLAPEIALLRQR 79 (234)
T ss_pred eEEEEECCCCCCCh----HHHHHHHHCCCeEEEEecCCCccCCCCccCCCEEEECCCCCCCCCCCcCCcHHHHHHHHHHH
Confidence 46777777655544 46777877887766554311000 0 0 00001111 123456666777766
Q ss_pred HHhcCCCCCEEEEEechhhHHHHHHH
Q 035721 125 RARHAPDLPAFLYSESLGGAIALYIT 150 (308)
Q Consensus 125 ~~~~~~~~~~~l~G~S~Gg~~a~~~a 150 (308)
... .+-++|.|+|..+....+
T Consensus 80 ~~~-----~~PvlGIC~G~Qlla~al 100 (234)
T PRK07053 80 LAA-----GLPTLGICLGAQLIARAL 100 (234)
T ss_pred HHC-----CCCEEEECccHHHHHHHc
Confidence 544 556999999998777665
No 356
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=39.29 E-value=79 Score=22.61 Aligned_cols=39 Identities=10% Similarity=0.295 Sum_probs=30.5
Q ss_pred eEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCc
Q 035721 60 VLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHG 98 (308)
Q Consensus 60 ~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G 98 (308)
.|+=+-|+-+++. .....+++.|.++||+|.++-..+|+
T Consensus 3 ~Il~ivG~k~SGKTTLie~lv~~L~~~G~rVa~iKH~hh~ 42 (161)
T COG1763 3 KILGIVGYKNSGKTTLIEKLVRKLKARGYRVATVKHAHHD 42 (161)
T ss_pred cEEEEEecCCCChhhHHHHHHHHHHhCCcEEEEEEecCCC
Confidence 4666667655543 34578999999999999999999998
No 357
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=39.09 E-value=2.1e+02 Score=23.11 Aligned_cols=97 Identities=19% Similarity=0.123 Sum_probs=52.1
Q ss_pred EEEEccCCCccchHHHHHHHHHHHc--CCeEEEecCCCC---------------cCCCCccccCCC-cchH----HHHHH
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKS--GFATCAIDHQGH---------------GFSDGLVAHIPD-LNPV----VEDAI 118 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~---------------G~s~~~~~~~~~-~~~~----~~d~~ 118 (308)
=.|+-|.|.... . ..+.++|.++ +.+++++|.-|. |.+.-+.....+ +++. .++..
T Consensus 171 d~fVagvGTGGT-i-tGvar~Lk~~~p~i~iv~vdP~~S~~~~~G~g~~~i~GIG~~~ip~~~~~~~iD~v~~V~d~~A~ 248 (300)
T COG0031 171 DAFVAGVGTGGT-I-TGVARYLKERNPNVRIVAVDPEGSVLLSGGEGPHKIEGIGAGFVPENLDLDLIDEVIRVSDEEAI 248 (300)
T ss_pred CEEEEeCCcchh-H-HHHHHHHHhhCCCcEEEEECCCCCcccCCCCCCcccCCCCCCcCCcccccccCceEEEECHHHHH
Confidence 344555443332 2 4677777765 478999997652 111111111000 1111 24555
Q ss_pred HHHHHHHHhcCCCCCEEEEEechhhHHHH--HHHHhcCCCccEEEEeCC
Q 035721 119 SFFDSFRARHAPDLPAFLYSESLGGAIAL--YITLRQKGAWDGLILNGA 165 (308)
Q Consensus 119 ~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~--~~a~~~p~~v~~~vl~~~ 165 (308)
+..+.+..+ .=.++|-|-|+.++. .+|.+.+. =+.+|.+-|
T Consensus 249 ~~~r~La~~-----eGilvG~SsGA~~~aa~~~a~~~~~-g~~IVti~p 291 (300)
T COG0031 249 ATARRLARE-----EGLLVGISSGAALAAALKLAKELPA-GKTIVTILP 291 (300)
T ss_pred HHHHHHHHH-----hCeeecccHHHHHHHHHHHHHhcCC-CCeEEEEEC
Confidence 666666655 558999999998754 55555553 345555554
No 358
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=38.97 E-value=1.7e+02 Score=24.75 Aligned_cols=95 Identities=12% Similarity=0.042 Sum_probs=54.6
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC--CCCCEE
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA--PDLPAF 135 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~--~~~~~~ 135 (308)
...|+++--..+....- ....+.+.+.|+-|+-+|..++=.--..... .---.+.|++++.+....... ....-+
T Consensus 48 ~~~villSd~~G~~d~~-~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~--ecvylisd~Ealsr~~Qr~a~~g~yr~PV 124 (456)
T COG3946 48 QGLVILLSDEAGIGDQE-RSRADALLARGALVAPVDLGAYLAALGADDN--ECVYLISDFEALSREAQRAADLGVYRLPV 124 (456)
T ss_pred ceeeEEEEcccChhhhh-cchhHHHhhcCCeeeccccchhhhccccCCC--cceEEehhHHHHhHHHHHHhhccCcccce
Confidence 44566665544444423 3567788888899999998765322211111 111123344444433322111 344667
Q ss_pred EEEechhhHHHHHHHHhcCC
Q 035721 136 LYSESLGGAIALYITLRQKG 155 (308)
Q Consensus 136 l~G~S~Gg~~a~~~a~~~p~ 155 (308)
|.|---||.++...+++.|+
T Consensus 125 l~g~g~Gg~~A~asaaqSp~ 144 (456)
T COG3946 125 LTGPGQGGTLAYASAAQSPD 144 (456)
T ss_pred EeecCCCcHHHHHHHhhChh
Confidence 88899999999988888764
No 359
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=38.84 E-value=21 Score=27.86 Aligned_cols=15 Identities=27% Similarity=0.328 Sum_probs=12.3
Q ss_pred CCCCEEEEEechhhH
Q 035721 130 PDLPAFLYSESLGGA 144 (308)
Q Consensus 130 ~~~~~~l~G~S~Gg~ 144 (308)
+...|+++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 345899999999975
No 360
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning]
Probab=38.80 E-value=73 Score=24.52 Aligned_cols=34 Identities=12% Similarity=0.162 Sum_probs=22.2
Q ss_pred EEEEccCCCccchHHHHH-HHHHHHc-CCeEEEecC
Q 035721 61 LCVVHGFTGESSWIVQLT-AVLFAKS-GFATCAIDH 94 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~-~~~l~~~-g~~v~~~d~ 94 (308)
.|.+-|=|++.......+ +..|.++ ||+|+++|-
T Consensus 2 kIaI~GKGG~GKTtiaalll~~l~~~~~~~VLvVDa 37 (255)
T COG3640 2 KIAITGKGGVGKTTIAALLLKRLLSKGGYNVLVVDA 37 (255)
T ss_pred eEEEecCCCccHHHHHHHHHHHHHhcCCceEEEEeC
Confidence 456677777665444444 5555555 599999994
No 361
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=38.73 E-value=1.7e+02 Score=21.94 Aligned_cols=38 Identities=8% Similarity=-0.000 Sum_probs=24.8
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+.|++++-.......+.+.+.+.+.+.|..+..+...
T Consensus 29 ~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~ 66 (210)
T cd03129 29 GARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLI 66 (210)
T ss_pred CCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEecc
Confidence 45577776655544435566777787778887766543
No 362
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=38.68 E-value=61 Score=26.01 Aligned_cols=37 Identities=11% Similarity=0.002 Sum_probs=28.6
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHh
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
..+.+++..+++++... ..-++|-|||+.+++.+..-
T Consensus 118 v~YW~El~~i~~w~~~~-----~~s~LgICwGaQa~a~algG 154 (302)
T PRK05368 118 VDYWDELKEILDWAKTH-----VTSTLFICWAAQAALYHLYG 154 (302)
T ss_pred CchHHHHHHHHHHHHHc-----CCCEEEEcHHHHHHHHHcCC
Confidence 33456688888888875 67899999999998877654
No 363
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=38.61 E-value=76 Score=22.91 Aligned_cols=84 Identities=18% Similarity=0.080 Sum_probs=50.7
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccc--c--CCCc--chHHHHHHHHHHHHHHhcCCC
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVA--H--IPDL--NPVVEDAISFFDSFRARHAPD 131 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~--~--~~~~--~~~~~d~~~~l~~~~~~~~~~ 131 (308)
+..|-++.|..+.-. ...++.|+++|..|+..|+|..+..+.... . .+.. -..-+|+.+.+...+.++
T Consensus 8 kglvalvtggasglg---~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kf--- 81 (260)
T KOG1199|consen 8 KGLVALVTGGASGLG---KATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKF--- 81 (260)
T ss_pred cCeeEEeecCccccc---HHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhc---
Confidence 456777777554433 567899999999999999997665432110 0 0011 112367777777666643
Q ss_pred CCEEEEEechhhHHHH
Q 035721 132 LPAFLYSESLGGAIAL 147 (308)
Q Consensus 132 ~~~~l~G~S~Gg~~a~ 147 (308)
.++.+.-.|.|-..+.
T Consensus 82 grld~~vncagia~a~ 97 (260)
T KOG1199|consen 82 GRLDALVNCAGIAYAF 97 (260)
T ss_pred cceeeeeeccceeeee
Confidence 2555666666655444
No 364
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=38.31 E-value=2.4e+02 Score=23.76 Aligned_cols=77 Identities=10% Similarity=0.053 Sum_probs=35.7
Q ss_pred ceEEEEccCCCccc--hHHHHHHHHHHHcCCeEEEecCCC--CcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCE
Q 035721 59 GVLCVVHGFTGESS--WIVQLTAVLFAKSGFATCAIDHQG--HGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPA 134 (308)
Q Consensus 59 ~~vv~~hG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G--~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~ 134 (308)
.++|+++-...... .....-...|.+.|+.|+-+..-- +|.... ....+.+++++.+...+..-+.. .+.++
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g~--g~~~~~~~i~~~v~~~~~~~~~~--~~~~v 188 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEGK--GRLAEPETIVKAAEREFSPKEDL--EGKRV 188 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCcccccccccC--CCCCCHHHHHHHHHHHHhhcccc--CCceE
Confidence 35666665322211 122344566777788776665221 233221 11235555555555544321111 34466
Q ss_pred EEEEe
Q 035721 135 FLYSE 139 (308)
Q Consensus 135 ~l~G~ 139 (308)
.+.|-
T Consensus 189 lit~g 193 (390)
T TIGR00521 189 LITAG 193 (390)
T ss_pred EEecC
Confidence 66666
No 365
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=38.30 E-value=1.1e+02 Score=25.02 Aligned_cols=27 Identities=19% Similarity=0.194 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHcCCeEEEecCCCCcCCC
Q 035721 74 IVQLTAVLFAKSGFATCAIDHQGHGFSD 101 (308)
Q Consensus 74 ~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 101 (308)
....+++.|.++|++|..+. ||+|...
T Consensus 67 ~v~~L~~~l~~~g~~~~ils-RGYg~~~ 93 (325)
T PRK00652 67 VVIALAEQLQARGLKPGVVS-RGYGGKL 93 (325)
T ss_pred HHHHHHHHHHHCCCeEEEEC-CCCCCCc
Confidence 45678899988999877665 8998754
No 366
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=37.76 E-value=95 Score=25.59 Aligned_cols=61 Identities=18% Similarity=0.112 Sum_probs=34.2
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHH
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRA 126 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~ 126 (308)
..+|+.+.|.-.+ + -.+..|.++||.|+.+-+.-+....... ....+...|...+.+.+++
T Consensus 4 ~kV~v~mSGGVDS-S----VaA~lLk~QGyeViGl~m~~~~~~~~~~---C~s~~d~~da~~va~~LGI 64 (356)
T COG0482 4 KKVLVGMSGGVDS-S----VAAYLLKEQGYEVIGLFMKNWDEDGGGG---CCSEEDLRDAERVADQLGI 64 (356)
T ss_pred cEEEEEccCCHHH-H----HHHHHHHHcCCeEEEEEEEeeccCCCCc---CCchhHHHHHHHHHHHhCC
Confidence 4566666664322 2 2345677889999999887666411111 1233334555555555554
No 367
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=37.69 E-value=2.1e+02 Score=22.83 Aligned_cols=58 Identities=19% Similarity=0.198 Sum_probs=30.9
Q ss_pred HHHHHHHHHHcCCe--EEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHH
Q 035721 75 VQLTAVLFAKSGFA--TCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAI 145 (308)
Q Consensus 75 ~~~~~~~l~~~g~~--v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~ 145 (308)
+....+.+.+.|.. =+.+|. |+|.+. +.+ ..-.+..-++.++.. ...+++|+|-=..+
T Consensus 165 l~~~i~~a~~~GI~~~~IilDP-GiGF~k-------~~~-~n~~ll~~l~~l~~l----g~Pilvg~SRKsfi 224 (282)
T PRK11613 165 FIEQIARCEAAGIAKEKLLLDP-GFGFGK-------NLS-HNYQLLARLAEFHHF----NLPLLVGMSRKSMI 224 (282)
T ss_pred HHHHHHHHHHcCCChhhEEEeC-CCCcCC-------CHH-HHHHHHHHHHHHHhC----CCCEEEEecccHHH
Confidence 34445566677885 677884 776543 221 122233333444332 25679999954443
No 368
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=37.65 E-value=23 Score=25.69 Aligned_cols=38 Identities=13% Similarity=0.033 Sum_probs=30.2
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhc
Q 035721 111 NPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 111 ~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
.++.+.+..++++.+.. -.-.+|-|||+..|+.++...
T Consensus 81 v~Yw~El~~i~dwa~~~-----v~stl~iCWgaqaal~~~yGi 118 (175)
T cd03131 81 VDYWEELTEILDWAKTH-----VTSTLFSCWAAMAALYYFYGI 118 (175)
T ss_pred cchHHHHHHHHHHHHHh-----CcchHHHHHHHHHHHHHHcCc
Confidence 34567788999988876 667899999999999887643
No 369
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=37.54 E-value=2.2e+02 Score=22.92 Aligned_cols=100 Identities=14% Similarity=-0.006 Sum_probs=60.3
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCcccc---------------C----CCcchHHHHHHHHH
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAH---------------I----PDLNPVVEDAISFF 121 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~---------------~----~~~~~~~~d~~~~l 121 (308)
.|++-|.+.+.......+++.....|-.++.+|.--.+........ . ..-..++..-.++.
T Consensus 4 rIyVvgT~DTKg~EL~ylad~I~~aG~~~v~vDvs~~~~~~~~~dis~~~VA~~hp~~~qAv~~~~Drg~AiaaMa~A~~ 83 (401)
T COG5441 4 RIYVVGTADTKGEELAYLADLIEAAGGSPVLVDVSTLRNPTSEVDISAEDVAGAHPGGRQAVLDGNDRGSAIAAMAEAFV 83 (401)
T ss_pred eEEEEecCCCcchhHHHHHHHHHHcCCCeEEEEeeccCCCCCCcccCHHHHhhhCCCcceeEeccCchhHHHHHHHHHHH
Confidence 5677787777665556778888888999999996432221111000 0 00111223334555
Q ss_pred HHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEE
Q 035721 122 DSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLI 161 (308)
Q Consensus 122 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~v 161 (308)
+.+..+. +-.-++-+|-|.|..+++-.+++.|--+-+++
T Consensus 84 r~l~sR~-dV~gmig~GGsgGT~lit~~m~~LPlgvPK~m 122 (401)
T COG5441 84 RFLSSRG-DVAGMIGMGGSGGTALITPAMRRLPLGVPKVM 122 (401)
T ss_pred HHhhccc-chhheeecCCCcchHhhhhHHHhcCcCCccee
Confidence 5555543 44456778889998888888888875554444
No 370
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=37.32 E-value=62 Score=24.80 Aligned_cols=21 Identities=19% Similarity=0.001 Sum_probs=18.0
Q ss_pred EEEEEechhhHHHHHHHHhcC
Q 035721 134 AFLYSESLGGAIALYITLRQK 154 (308)
Q Consensus 134 ~~l~G~S~Gg~~a~~~a~~~p 154 (308)
-.+.|-|.|+.++..++...+
T Consensus 31 ~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 31 TPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred CEEEEEcHHHHHHHHHHcCCC
Confidence 479999999999999988654
No 371
>PRK09135 pteridine reductase; Provisional
Probab=37.15 E-value=61 Score=24.66 Aligned_cols=32 Identities=13% Similarity=0.202 Sum_probs=23.9
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++-|..+.-. ..+++.|.++|+.|+.++.+
T Consensus 8 ~vlItGa~g~iG---~~l~~~l~~~g~~v~~~~r~ 39 (249)
T PRK09135 8 VALITGGARRIG---AAIARTLHAAGYRVAIHYHR 39 (249)
T ss_pred EEEEeCCCchHH---HHHHHHHHHCCCEEEEEcCC
Confidence 566667554333 57888999999999999865
No 372
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=37.12 E-value=59 Score=24.99 Aligned_cols=32 Identities=16% Similarity=0.054 Sum_probs=22.6
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|..+.-. ..+++.|.++|++|+..+..
T Consensus 12 ~vlItGa~g~iG---~~ia~~l~~~G~~V~~~~r~ 43 (255)
T PRK07523 12 RALVTGSSQGIG---YALAEGLAQAGAEVILNGRD 43 (255)
T ss_pred EEEEECCcchHH---HHHHHHHHHcCCEEEEEeCC
Confidence 466666544333 57888899999999988753
No 373
>PRK07326 short chain dehydrogenase; Provisional
Probab=37.10 E-value=65 Score=24.34 Aligned_cols=31 Identities=10% Similarity=0.139 Sum_probs=22.4
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDH 94 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 94 (308)
.+++.|.++.-. ..+++.|.++|+.|++++.
T Consensus 8 ~ilItGatg~iG---~~la~~l~~~g~~V~~~~r 38 (237)
T PRK07326 8 VALITGGSKGIG---FAIAEALLAEGYKVAITAR 38 (237)
T ss_pred EEEEECCCCcHH---HHHHHHHHHCCCEEEEeeC
Confidence 566666554433 5678888889999999875
No 374
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=37.02 E-value=93 Score=23.85 Aligned_cols=58 Identities=14% Similarity=0.242 Sum_probs=36.2
Q ss_pred eEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEE--EEEechhhHH-HHHHH
Q 035721 88 ATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAF--LYSESLGGAI-ALYIT 150 (308)
Q Consensus 88 ~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~--l~G~S~Gg~~-a~~~a 150 (308)
-|+.+|-+|...+....- ..+......+...+...+.. +.+++ |+|++++|.. +.-+.
T Consensus 67 Iv~lVD~~sQa~grreEl--lGi~~alAhla~a~a~AR~~---GHpvI~Lv~G~A~SGaFLA~Glq 127 (234)
T PF06833_consen 67 IVALVDVPSQAYGRREEL--LGINQALAHLAKAYALARLA---GHPVIGLVYGKAMSGAFLAHGLQ 127 (234)
T ss_pred EEEEEeCCccccchHHHH--hhHHHHHHHHHHHHHHHHHc---CCCeEEEEecccccHHHHHHHHH
Confidence 478899998887654432 24555555555565555553 44655 8899987764 44443
No 375
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=37.02 E-value=36 Score=18.17 Aligned_cols=32 Identities=19% Similarity=0.240 Sum_probs=21.3
Q ss_pred cCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHH
Q 035721 85 SGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFD 122 (308)
Q Consensus 85 ~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~ 122 (308)
.+|.+.++|++|.-.. + .+.++..+.+..++.
T Consensus 12 ~~y~~~~pdlpg~~t~----G--~t~eea~~~~~eal~ 43 (48)
T PF03681_consen 12 GGYVAYFPDLPGCFTQ----G--DTLEEALENAKEALE 43 (48)
T ss_dssp SSEEEEETTCCTCEEE----E--SSHHHHHHHHHHHHH
T ss_pred CeEEEEeCCccChhhc----C--CCHHHHHHHHHHHHH
Confidence 4788999999976421 1 266666666666654
No 376
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=36.85 E-value=62 Score=26.03 Aligned_cols=31 Identities=26% Similarity=0.260 Sum_probs=23.5
Q ss_pred eEEEEccCCCccchHHHHHHHHHHHcCCeEEEec
Q 035721 60 VLCVVHGFTGESSWIVQLTAVLFAKSGFATCAID 93 (308)
Q Consensus 60 ~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d 93 (308)
-.|||.| +++. +-..++..|.++||+|++-=
T Consensus 30 k~VlITG--CDSG-fG~~LA~~L~~~Gf~V~Agc 60 (322)
T KOG1610|consen 30 KAVLITG--CDSG-FGRLLAKKLDKKGFRVFAGC 60 (322)
T ss_pred cEEEEec--CCcH-HHHHHHHHHHhcCCEEEEEe
Confidence 3677777 3444 54689999999999999853
No 377
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=36.83 E-value=1e+02 Score=18.88 Aligned_cols=31 Identities=32% Similarity=0.283 Sum_probs=21.0
Q ss_pred EEccCCCccc-hHHHHHHHHHHHcCCeEEEec
Q 035721 63 VVHGFTGESS-WIVQLTAVLFAKSGFATCAID 93 (308)
Q Consensus 63 ~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d 93 (308)
++-|.++.+. ..-..++..|++.|++|+.+|
T Consensus 3 ~~~g~~G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 3 VVTGKGGVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 3334443332 344678888988899999999
No 378
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=36.67 E-value=54 Score=24.03 Aligned_cols=30 Identities=20% Similarity=0.182 Sum_probs=19.1
Q ss_pred EEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 62 CVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 62 v~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
|.+.|.|.-+ -.++..|++.|+.|+.+|.-
T Consensus 3 I~ViGlGyvG----l~~A~~lA~~G~~V~g~D~~ 32 (185)
T PF03721_consen 3 IAVIGLGYVG----LPLAAALAEKGHQVIGVDID 32 (185)
T ss_dssp EEEE--STTH----HHHHHHHHHTTSEEEEE-S-
T ss_pred EEEECCCcch----HHHHHHHHhCCCEEEEEeCC
Confidence 3445665332 36788899999999999964
No 379
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=36.50 E-value=2.4e+02 Score=23.08 Aligned_cols=35 Identities=17% Similarity=0.078 Sum_probs=23.8
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQG 96 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 96 (308)
++...|.+++-. ....+++.|.+.||.|..+-..+
T Consensus 5 ~i~~~g~gG~~~-~~~~la~~L~~~g~ev~vv~~~~ 39 (357)
T PRK00726 5 LLAGGGTGGHVF-PALALAEELKKRGWEVLYLGTAR 39 (357)
T ss_pred EEEcCcchHhhh-HHHHHHHHHHhCCCEEEEEECCC
Confidence 444456665544 44579999999999988875443
No 380
>TIGR01626 ytfJ_HI0045 conserved hypothetical protein YtfJ-family, TIGR01626. This model represents sequences from gamma proteobacteria that are related to the E. coli protein, YtfJ.
Probab=36.14 E-value=1.8e+02 Score=21.47 Aligned_cols=54 Identities=17% Similarity=0.131 Sum_probs=33.3
Q ss_pred CCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeE------EEecC
Q 035721 40 RGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFAT------CAIDH 94 (308)
Q Consensus 40 ~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v------~~~d~ 94 (308)
+|.++.|..|...+-..+-..|-++-|+....+ ...++...|.++|+.+ +.++.
T Consensus 43 ~~~~~~y~~~~~~~l~GKV~lvn~~Aswc~~c~-~e~P~l~~l~~~~~~~~~y~~t~~IN~ 102 (184)
T TIGR01626 43 SGKDTVYQPWGSAELAGKVRVVHHIAGRTSAKE-XNASLIDAIKAAKFPPVKYQTTTIINA 102 (184)
T ss_pred cCCcccceeccHHHcCCCEEEEEEEecCCChhh-ccchHHHHHHHcCCCcccccceEEEEC
Confidence 445788988876654211223334445554444 4468888898888888 77753
No 381
>COG0400 Predicted esterase [General function prediction only]
Probab=36.14 E-value=1.9e+02 Score=21.80 Aligned_cols=40 Identities=15% Similarity=0.042 Sum_probs=30.3
Q ss_pred CCcceEEEEccCCCcc--chHHHHHHHHHHHcCCeEEEecCC
Q 035721 56 KTLGVLCVVHGFTGES--SWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 56 ~~~~~vv~~hG~~~~~--~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
....+|+++||..... ...-..+.+.|.+.|..|..-++.
T Consensus 144 ~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~ 185 (207)
T COG0400 144 LAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE 185 (207)
T ss_pred cCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec
Confidence 3567899999986553 223457888898899999998886
No 382
>PRK08339 short chain dehydrogenase; Provisional
Probab=35.88 E-value=68 Score=24.93 Aligned_cols=32 Identities=13% Similarity=0.105 Sum_probs=23.6
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
++++.|..+.-. ..+++.|.++|++|+..+..
T Consensus 10 ~~lItGas~gIG---~aia~~l~~~G~~V~~~~r~ 41 (263)
T PRK08339 10 LAFTTASSKGIG---FGVARVLARAGADVILLSRN 41 (263)
T ss_pred EEEEeCCCCcHH---HHHHHHHHHCCCEEEEEeCC
Confidence 566777554433 57899999999999998753
No 383
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=35.57 E-value=47 Score=26.58 Aligned_cols=22 Identities=18% Similarity=0.330 Sum_probs=18.3
Q ss_pred CEEEEEechhhHHHHHHHHhcC
Q 035721 133 PAFLYSESLGGAIALYITLRQK 154 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~~p 154 (308)
+-++.|-|.|+.+|..++....
T Consensus 98 ~~~i~GtSaGAi~aa~~~~~~~ 119 (298)
T cd07206 98 PRVISGSSAGAIVAALLGTHTD 119 (298)
T ss_pred CCEEEEEcHHHHHHHHHHcCCc
Confidence 5579999999999999887543
No 384
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=35.53 E-value=72 Score=22.50 Aligned_cols=18 Identities=22% Similarity=0.198 Sum_probs=16.1
Q ss_pred CEEEEEechhhHHHHHHH
Q 035721 133 PAFLYSESLGGAIALYIT 150 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a 150 (308)
.-.+.|.|.|+.++..++
T Consensus 29 ~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 29 VTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCEEEEEcHHHHHHHHHh
Confidence 567889999999999988
No 385
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=35.37 E-value=38 Score=28.30 Aligned_cols=37 Identities=16% Similarity=0.254 Sum_probs=25.3
Q ss_pred HHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCc
Q 035721 119 SFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAW 157 (308)
Q Consensus 119 ~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v 157 (308)
.+++.+... +-.+-++.|-|.|+.+|..+|...++.+
T Consensus 100 Gv~kaL~e~--gl~p~~i~GtS~Gaivaa~~a~~~~~e~ 136 (391)
T cd07229 100 GVVKALWLR--GLLPRIITGTATGALIAALVGVHTDEEL 136 (391)
T ss_pred HHHHHHHHc--CCCCceEEEecHHHHHHHHHHcCCHHHH
Confidence 344444443 3446689999999999999998554433
No 386
>PRK05876 short chain dehydrogenase; Provisional
Probab=35.32 E-value=68 Score=25.17 Aligned_cols=32 Identities=22% Similarity=0.142 Sum_probs=23.9
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|..+.-. ..+++.|.++|++|+..+.+
T Consensus 8 ~vlVTGas~gIG---~ala~~La~~G~~Vv~~~r~ 39 (275)
T PRK05876 8 GAVITGGASGIG---LATGTEFARRGARVVLGDVD 39 (275)
T ss_pred EEEEeCCCchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 566777654433 57899999999999988754
No 387
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=34.94 E-value=63 Score=25.24 Aligned_cols=83 Identities=24% Similarity=0.227 Sum_probs=44.0
Q ss_pred HHHHHHHHcCCeEEEecCCC-CcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHH----HHHH
Q 035721 77 LTAVLFAKSGFATCAIDHQG-HGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIAL----YITL 151 (308)
Q Consensus 77 ~~~~~l~~~g~~v~~~d~~G-~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~----~~a~ 151 (308)
..++.+++.|.+++++.+-- .|.+-+... ..++++.++.+.++.+..... ...++++.| ||-++. .+..
T Consensus 161 e~A~~M~~AGaDiiv~H~GlT~gG~~Ga~~-~~sl~~a~~~~~~i~~aa~~v---~~dii~l~h--GGPI~~p~D~~~~l 234 (268)
T PF09370_consen 161 EQARAMAEAGADIIVAHMGLTTGGSIGAKT-ALSLEEAAERIQEIFDAARAV---NPDIIVLCH--GGPIATPEDAQYVL 234 (268)
T ss_dssp HHHHHHHHHT-SEEEEE-SS-----------S--HHHHHHHHHHHHHHHHCC----TT-EEEEE--CTTB-SHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecCCccCCCCcCccc-cCCHHHHHHHHHHHHHHHHHh---CCCeEEEEe--CCCCCCHHHHHHHH
Confidence 35677888899999987632 122222222 247888888888888776553 236677766 887763 3344
Q ss_pred hcCCCccEEEEeCC
Q 035721 152 RQKGAWDGLILNGA 165 (308)
Q Consensus 152 ~~p~~v~~~vl~~~ 165 (308)
++-+.+.+.+--++
T Consensus 235 ~~t~~~~Gf~G~Ss 248 (268)
T PF09370_consen 235 RNTKGIHGFIGASS 248 (268)
T ss_dssp HH-TTEEEEEESTT
T ss_pred hcCCCCCEEecccc
Confidence 44334777775554
No 388
>cd02020 CMPK Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor.
Probab=34.69 E-value=72 Score=21.82 Aligned_cols=30 Identities=23% Similarity=0.357 Sum_probs=18.4
Q ss_pred EEEEccCCCccchHHHHHHHHHHHc-CCeEEEec
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKS-GFATCAID 93 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d 93 (308)
||++-|..|++. ..++..|++. |+.++..|
T Consensus 1 ~I~i~G~~GsGK---st~a~~la~~~~~~~~~~~ 31 (147)
T cd02020 1 IIAIDGPAGSGK---STVAKLLAKKLGLPYLDTG 31 (147)
T ss_pred CEEEECCCCCCH---HHHHHHHHHHhCCceeccc
Confidence 356666666655 3456666654 67777766
No 389
>PRK06953 short chain dehydrogenase; Provisional
Probab=34.41 E-value=76 Score=23.78 Aligned_cols=32 Identities=9% Similarity=0.141 Sum_probs=23.1
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|..+.-. ..+++.|.++|++|+.++..
T Consensus 3 ~vlvtG~sg~iG---~~la~~L~~~G~~v~~~~r~ 34 (222)
T PRK06953 3 TVLIVGASRGIG---REFVRQYRADGWRVIATARD 34 (222)
T ss_pred eEEEEcCCCchh---HHHHHHHHhCCCEEEEEECC
Confidence 356777554433 57888898899999998754
No 390
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=34.41 E-value=61 Score=24.84 Aligned_cols=32 Identities=22% Similarity=0.230 Sum_probs=23.6
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|..+.-. ..+++.|.++|++|+.++..
T Consensus 6 ~vlItG~sg~iG---~~la~~l~~~g~~v~~~~r~ 37 (258)
T PRK12429 6 VALVTGAASGIG---LEIALALAKEGAKVVIADLN 37 (258)
T ss_pred EEEEECCCchHH---HHHHHHHHHCCCeEEEEeCC
Confidence 466777554433 57889999999999998764
No 391
>PRK05665 amidotransferase; Provisional
Probab=34.25 E-value=1e+02 Score=23.73 Aligned_cols=37 Identities=11% Similarity=0.213 Sum_probs=26.8
Q ss_pred CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHH
Q 035721 109 DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYIT 150 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 150 (308)
+...|...+.++++.+... ++=++|.|+|..+...++
T Consensus 72 ~~~pwi~~l~~~i~~~~~~-----~~PilGIC~GhQlla~Al 108 (240)
T PRK05665 72 GTDPWIQTLKTYLLKLYER-----GDKLLGVCFGHQLLALLL 108 (240)
T ss_pred ccchHHHHHHHHHHHHHhc-----CCCEEEEeHHHHHHHHHh
Confidence 4456777788888776554 455999999998766555
No 392
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB. This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes.
Probab=34.09 E-value=97 Score=21.91 Aligned_cols=37 Identities=14% Similarity=0.265 Sum_probs=25.6
Q ss_pred EEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCc
Q 035721 62 CVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHG 98 (308)
Q Consensus 62 v~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G 98 (308)
+.+-|..+++. .....+...|..+|++|.++..-+++
T Consensus 2 i~i~G~~gsGKTtl~~~l~~~l~~~G~~V~viK~~~~~ 39 (155)
T TIGR00176 2 LQIVGPKNSGKTTLIERLVKALKARGYRVATIKHDHHD 39 (155)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 44556555543 34467888888889999999876554
No 393
>PRK08265 short chain dehydrogenase; Provisional
Probab=33.74 E-value=74 Score=24.65 Aligned_cols=32 Identities=16% Similarity=0.166 Sum_probs=23.4
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|..+.-. ..+++.|.++|++|+..+..
T Consensus 8 ~vlItGas~gIG---~~ia~~l~~~G~~V~~~~r~ 39 (261)
T PRK08265 8 VAIVTGGATLIG---AAVARALVAAGARVAIVDID 39 (261)
T ss_pred EEEEECCCChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 566667544332 57899999999999998753
No 394
>TIGR00174 miaA tRNA isopentenyltransferase (miaA). Catalyzes the first step in the modification of an adenosine near the anticodon to 2-methylthio-N6-isopentyladenosine.
Probab=33.69 E-value=1.2e+02 Score=24.30 Aligned_cols=73 Identities=16% Similarity=0.133 Sum_probs=40.5
Q ss_pred EEEccCCCccchHHHHHHHHHHHc-CCeEEEecC----CCC--cCCCC----------------ccccCCCcchHHHHHH
Q 035721 62 CVVHGFTGESSWIVQLTAVLFAKS-GFATCAIDH----QGH--GFSDG----------------LVAHIPDLNPVVEDAI 118 (308)
Q Consensus 62 v~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~----~G~--G~s~~----------------~~~~~~~~~~~~~d~~ 118 (308)
|++-|-.+++. ..++..|++. +..++..|- +|. |...+ .+...++..++..+..
T Consensus 2 i~i~G~t~~GK---s~la~~l~~~~~~~iis~Ds~qvY~~l~IgTakp~~~e~~~v~hhlid~~~~~~~~~v~~f~~~a~ 78 (287)
T TIGR00174 2 IFIMGPTAVGK---SQLAIQLAKKLNAEIISVDSMQIYKGMDIGTAKPSLQEREGIPHHLIDILDPSESYSAADFQTLAL 78 (287)
T ss_pred EEEECCCCCCH---HHHHHHHHHhCCCcEEEechhheeeeccccCCCCCHHHHcCccEEEEEEechhheEcHHHHHHHHH
Confidence 55666555554 2455555554 667888874 221 21111 1112245667778888
Q ss_pred HHHHHHHHhcCCCCCEEEEEec
Q 035721 119 SFFDSFRARHAPDLPAFLYSES 140 (308)
Q Consensus 119 ~~l~~~~~~~~~~~~~~l~G~S 140 (308)
..++.+... +...+++|-|
T Consensus 79 ~~i~~~~~~---g~~pi~vGGT 97 (287)
T TIGR00174 79 NAIADITAR---GKIPLLVGGT 97 (287)
T ss_pred HHHHHHHhC---CCCEEEEcCc
Confidence 888877664 2345667655
No 395
>PRK06720 hypothetical protein; Provisional
Probab=33.57 E-value=84 Score=22.60 Aligned_cols=31 Identities=29% Similarity=0.259 Sum_probs=23.3
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDH 94 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 94 (308)
++++.|.++... ..++..|.++|++|+..|.
T Consensus 18 ~~lVTGa~~GIG---~aia~~l~~~G~~V~l~~r 48 (169)
T PRK06720 18 VAIVTGGGIGIG---RNTALLLAKQGAKVIVTDI 48 (169)
T ss_pred EEEEecCCChHH---HHHHHHHHHCCCEEEEEEC
Confidence 677777655433 4678888899999999874
No 396
>PRK10867 signal recognition particle protein; Provisional
Probab=33.48 E-value=3.1e+02 Score=23.56 Aligned_cols=69 Identities=13% Similarity=0.172 Sum_probs=35.9
Q ss_pred HHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCC--Cc
Q 035721 80 VLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKG--AW 157 (308)
Q Consensus 80 ~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v 157 (308)
+.....+|.++.+|-+|.... -+...+.+..+.+.+. +..++++.-++-|.-+...+..+.+ .+
T Consensus 177 ~~a~~~~~DvVIIDTaGrl~~---------d~~lm~eL~~i~~~v~-----p~evllVlda~~gq~av~~a~~F~~~~~i 242 (433)
T PRK10867 177 EEAKENGYDVVIVDTAGRLHI---------DEELMDELKAIKAAVN-----PDEILLVVDAMTGQDAVNTAKAFNEALGL 242 (433)
T ss_pred HHHHhcCCCEEEEeCCCCccc---------CHHHHHHHHHHHHhhC-----CCeEEEEEecccHHHHHHHHHHHHhhCCC
Confidence 344455799999999886432 1222333333333332 2244555555555555555554332 35
Q ss_pred cEEEE
Q 035721 158 DGLIL 162 (308)
Q Consensus 158 ~~~vl 162 (308)
.++|+
T Consensus 243 ~giIl 247 (433)
T PRK10867 243 TGVIL 247 (433)
T ss_pred CEEEE
Confidence 66666
No 397
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=33.37 E-value=66 Score=25.87 Aligned_cols=17 Identities=24% Similarity=0.511 Sum_probs=15.1
Q ss_pred EEEEechhhHHHHHHHH
Q 035721 135 FLYSESLGGAIALYITL 151 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~ 151 (308)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 48899999999998875
No 398
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=33.36 E-value=66 Score=24.62 Aligned_cols=37 Identities=8% Similarity=-0.028 Sum_probs=21.8
Q ss_pred CcceEEEEccCCCccc----hHHHHHHHHHHHcCCeEEEec
Q 035721 57 TLGVLCVVHGFTGESS----WIVQLTAVLFAKSGFATCAID 93 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~----~~~~~~~~~l~~~g~~v~~~d 93 (308)
.++.|++.+|.+.... ..|..+++.|.+.++.|+.+-
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g 144 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLG 144 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEc
Confidence 4677888888765433 236788999988887777653
No 399
>PRK05571 ribose-5-phosphate isomerase B; Provisional
Probab=33.28 E-value=1.7e+02 Score=20.58 Aligned_cols=76 Identities=11% Similarity=0.081 Sum_probs=37.6
Q ss_pred HHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcC
Q 035721 75 VQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQK 154 (308)
Q Consensus 75 ~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 154 (308)
-+.+.++|.++||.|+-+- . .+.... .++.+++..+...+ .... ...-|.+.|...|-.+ .|.++|
T Consensus 15 K~~l~~~L~~~g~eV~D~G---~--~~~~~~--~dYpd~a~~va~~V---~~g~-~~~GIliCGtGiG~si---aANK~~ 80 (148)
T PRK05571 15 KEEIIEHLEELGHEVIDLG---P--DSYDAS--VDYPDYAKKVAEAV---VAGE-ADRGILICGTGIGMSI---AANKVK 80 (148)
T ss_pred HHHHHHHHHHCCCEEEEcC---C--CCCCCC--CCHHHHHHHHHHHH---HcCC-CCEEEEEcCCcHHHHH---HHhcCC
Confidence 3578899999999885432 1 111101 23444444444433 2220 1123445555555444 355666
Q ss_pred CCccEEEEeCC
Q 035721 155 GAWDGLILNGA 165 (308)
Q Consensus 155 ~~v~~~vl~~~ 165 (308)
. |++.+..++
T Consensus 81 G-IRAA~~~d~ 90 (148)
T PRK05571 81 G-IRAALCHDT 90 (148)
T ss_pred C-eEEEEECCH
Confidence 4 666655554
No 400
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=33.22 E-value=77 Score=24.33 Aligned_cols=32 Identities=19% Similarity=0.054 Sum_probs=23.4
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|..+.-. ..+++.|.++|++|+..+..
T Consensus 11 ~~lItGas~giG---~~ia~~L~~~G~~vvl~~r~ 42 (254)
T PRK08085 11 NILITGSAQGIG---FLLATGLAEYGAEIIINDIT 42 (254)
T ss_pred EEEEECCCChHH---HHHHHHHHHcCCEEEEEcCC
Confidence 567777554433 57889999999999998753
No 401
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=33.17 E-value=62 Score=26.50 Aligned_cols=31 Identities=10% Similarity=0.004 Sum_probs=22.4
Q ss_pred EEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 62 CVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 62 v~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
|++-|..|... ..+++.|.++|+.|+++|..
T Consensus 18 vlVtGatGfiG---~~lv~~L~~~g~~V~~~d~~ 48 (348)
T PRK15181 18 WLITGVAGFIG---SGLLEELLFLNQTVIGLDNF 48 (348)
T ss_pred EEEECCccHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 55555544433 46888999999999999864
No 402
>PRK08703 short chain dehydrogenase; Provisional
Probab=33.07 E-value=85 Score=23.79 Aligned_cols=31 Identities=16% Similarity=0.202 Sum_probs=22.0
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDH 94 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 94 (308)
.+++.|..+.-. ..+++.|.++|++|+.++.
T Consensus 8 ~vlItG~sggiG---~~la~~l~~~g~~V~~~~r 38 (239)
T PRK08703 8 TILVTGASQGLG---EQVAKAYAAAGATVILVAR 38 (239)
T ss_pred EEEEECCCCcHH---HHHHHHHHHcCCEEEEEeC
Confidence 456666544333 5788889999999999874
No 403
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=33.06 E-value=36 Score=26.53 Aligned_cols=30 Identities=20% Similarity=0.171 Sum_probs=23.3
Q ss_pred CEE-EEEechhhHHHHHHHHhcCCCccEEEE
Q 035721 133 PAF-LYSESLGGAIALYITLRQKGAWDGLIL 162 (308)
Q Consensus 133 ~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~vl 162 (308)
++. ++|.|+|+.-+..+..+.+.+-+++++
T Consensus 40 ~f~~~~GvSAGA~n~~aYls~Q~gra~~~~~ 70 (292)
T COG4667 40 PFDLVVGVSAGALNLVAYLSKQRGRARRVIV 70 (292)
T ss_pred CcCeeeeecHhHHhHHHHhhcCCchHHHHHH
Confidence 443 789999999999999888876555553
No 404
>PRK08643 acetoin reductase; Validated
Probab=33.04 E-value=79 Score=24.27 Aligned_cols=32 Identities=19% Similarity=0.255 Sum_probs=22.1
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
++++-|..+.-. ..+++.|.++|++|+..+..
T Consensus 4 ~~lItGas~giG---~~la~~l~~~G~~v~~~~r~ 35 (256)
T PRK08643 4 VALVTGAGQGIG---FAIAKRLVEDGFKVAIVDYN 35 (256)
T ss_pred EEEEECCCChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 445556443322 57888999999999998753
No 405
>PRK06924 short chain dehydrogenase; Provisional
Probab=32.93 E-value=76 Score=24.27 Aligned_cols=33 Identities=12% Similarity=0.172 Sum_probs=23.0
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQG 96 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 96 (308)
.+++-|..+.-. ..+++.|.++|++|+..+...
T Consensus 3 ~vlItGasggiG---~~ia~~l~~~g~~V~~~~r~~ 35 (251)
T PRK06924 3 YVIITGTSQGLG---EAIANQLLEKGTHVISISRTE 35 (251)
T ss_pred EEEEecCCchHH---HHHHHHHHhcCCEEEEEeCCc
Confidence 355556444333 578899999999999987643
No 406
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=32.92 E-value=1e+02 Score=25.10 Aligned_cols=33 Identities=15% Similarity=0.409 Sum_probs=24.5
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQG 96 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 96 (308)
.+++-|..+... ..+++.|.++|++|++.+.+.
T Consensus 8 ~vlVTGatGfiG---~~l~~~L~~~G~~V~~~~r~~ 40 (340)
T PLN02653 8 VALITGITGQDG---SYLTEFLLSKGYEVHGIIRRS 40 (340)
T ss_pred EEEEECCCCccH---HHHHHHHHHCCCEEEEEeccc
Confidence 466777655444 468889999999999998654
No 407
>PRK06696 uridine kinase; Validated
Probab=32.87 E-value=1.4e+02 Score=22.67 Aligned_cols=37 Identities=16% Similarity=0.098 Sum_probs=26.5
Q ss_pred CcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEec
Q 035721 57 TLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAID 93 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d 93 (308)
..|.||.+-|..+++. ..-+.+++.|...|..|+.+.
T Consensus 20 ~~~~iI~I~G~sgsGKSTlA~~L~~~l~~~g~~v~~~~ 57 (223)
T PRK06696 20 TRPLRVAIDGITASGKTTFADELAEEIKKRGRPVIRAS 57 (223)
T ss_pred CCceEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 3678999999887765 234567777776677777744
No 408
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=32.84 E-value=77 Score=24.03 Aligned_cols=32 Identities=16% Similarity=0.175 Sum_probs=23.9
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|..+.-. ..+++.|.++|++|+..+..
T Consensus 4 ~vlItG~s~~iG---~~la~~l~~~g~~vi~~~r~ 35 (245)
T PRK12824 4 IALVTGAKRGIG---SAIARELLNDGYRVIATYFS 35 (245)
T ss_pred EEEEeCCCchHH---HHHHHHHHHcCCEEEEEeCC
Confidence 567777544433 57889999999999999865
No 409
>PRK05717 oxidoreductase; Validated
Probab=32.76 E-value=79 Score=24.32 Aligned_cols=32 Identities=16% Similarity=0.177 Sum_probs=23.7
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|..+.-. ..+++.|.++|+.|+..|..
T Consensus 12 ~vlItG~sg~IG---~~~a~~l~~~g~~v~~~~~~ 43 (255)
T PRK05717 12 VALVTGAARGIG---LGIAAWLIAEGWQVVLADLD 43 (255)
T ss_pred EEEEeCCcchHH---HHHHHHHHHcCCEEEEEcCC
Confidence 566777654433 57889999999999998753
No 410
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=32.67 E-value=70 Score=24.17 Aligned_cols=32 Identities=16% Similarity=0.188 Sum_probs=23.7
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|.++... ..+++.|.++|+.|+..+..
T Consensus 7 ~vlItGa~g~iG---~~~a~~l~~~G~~V~~~~r~ 38 (238)
T PRK05786 7 KVAIIGVSEGLG---YAVAYFALKEGAQVCINSRN 38 (238)
T ss_pred EEEEECCCchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 467777654433 46788898999999998753
No 411
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=32.55 E-value=1.8e+02 Score=20.58 Aligned_cols=64 Identities=16% Similarity=0.160 Sum_probs=37.8
Q ss_pred HHHHHHHHHcCC-eEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEec-hhhHHHHHHHHhc
Q 035721 76 QLTAVLFAKSGF-ATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSES-LGGAIALYITLRQ 153 (308)
Q Consensus 76 ~~~~~~l~~~g~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S-~Gg~~a~~~a~~~ 153 (308)
..+.+.+...|. +|+.++.+.... ++.+.+++-+.++++...- .++++|++ .|.-++..+|.+.
T Consensus 48 ~~l~~~l~~~G~d~v~~~~~~~~~~--------~~~~~~a~~l~~~~~~~~~------~lVl~~~t~~g~~la~~lA~~L 113 (164)
T PF01012_consen 48 EALRKALAKYGADKVYHIDDPALAE--------YDPEAYADALAELIKEEGP------DLVLFGSTSFGRDLAPRLAARL 113 (164)
T ss_dssp HHHHHHHHSTTESEEEEEE-GGGTT--------C-HHHHHHHHHHHHHHHT-------SEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHhhhhhhcCCcEEEEecCccccc--------cCHHHHHHHHHHHHHhcCC------CEEEEcCcCCCCcHHHHHHHHh
Confidence 345566665676 588887553221 2455566666666666222 78888886 5555676777654
No 412
>PRK07814 short chain dehydrogenase; Provisional
Probab=32.49 E-value=80 Score=24.47 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=23.2
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|.++.-. ..+++.|.++|++|+..+..
T Consensus 12 ~vlItGasggIG---~~~a~~l~~~G~~Vi~~~r~ 43 (263)
T PRK07814 12 VAVVTGAGRGLG---AAIALAFAEAGADVLIAART 43 (263)
T ss_pred EEEEECCCChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 466677544333 47888899999999998764
No 413
>PLN02924 thymidylate kinase
Probab=32.17 E-value=1.6e+02 Score=22.43 Aligned_cols=41 Identities=15% Similarity=0.141 Sum_probs=30.5
Q ss_pred CcceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCC
Q 035721 57 TLGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGH 97 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~ 97 (308)
.++.+|.+=|..|++. .....+.+.|..+|+.|+....|+.
T Consensus 14 ~~g~~IviEGiDGsGKsTq~~~L~~~l~~~g~~v~~~~ep~~ 55 (220)
T PLN02924 14 SRGALIVLEGLDRSGKSTQCAKLVSFLKGLGVAAELWRFPDR 55 (220)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHhcCCCceeeeCCCC
Confidence 4566788888877654 2346788888888999988877763
No 414
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=32.15 E-value=2e+02 Score=20.79 Aligned_cols=32 Identities=16% Similarity=0.166 Sum_probs=21.6
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEec
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAID 93 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d 93 (308)
-|++.|.|.+.. .-..+...|...|..+...+
T Consensus 32 ~I~i~G~G~S~~-~A~~~~~~l~~~g~~~~~~~ 63 (179)
T TIGR03127 32 RIFVAGAGRSGL-VGKAFAMRLMHLGFNVYVVG 63 (179)
T ss_pred EEEEEecCHHHH-HHHHHHHHHHhCCCeEEEeC
Confidence 477777775543 34566677777788888774
No 415
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=32.14 E-value=55 Score=20.14 Aligned_cols=19 Identities=5% Similarity=0.256 Sum_probs=16.2
Q ss_pred HHHHHHHHHcCCeEEEecC
Q 035721 76 QLTAVLFAKSGFATCAIDH 94 (308)
Q Consensus 76 ~~~~~~l~~~g~~v~~~d~ 94 (308)
..+.+.|.++||.|+-++-
T Consensus 11 s~v~~~L~~~GyeVv~l~~ 29 (80)
T PF03698_consen 11 SNVKEALREKGYEVVDLEN 29 (80)
T ss_pred hHHHHHHHHCCCEEEecCC
Confidence 5788999999999998873
No 416
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=32.14 E-value=2.9e+02 Score=22.73 Aligned_cols=75 Identities=16% Similarity=0.182 Sum_probs=49.9
Q ss_pred HHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcC-CCCCEEEEEechhhHHHHHHHHhcCC--
Q 035721 79 AVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHA-PDLPAFLYSESLGGAIALYITLRQKG-- 155 (308)
Q Consensus 79 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~-- 155 (308)
.+.-..+||.|+.+|--|.= .+-..+.+.+..+.+-+..... .+..+.++--+.-|.-++.-|..+.+
T Consensus 214 i~~Akar~~DvvliDTAGRL---------hnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~eav 284 (340)
T COG0552 214 IQAAKARGIDVVLIDTAGRL---------HNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFNEAV 284 (340)
T ss_pred HHHHHHcCCCEEEEeCcccc---------cCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHHHhc
Confidence 34444567888888876532 2344556777777776665431 23347777799999989888887654
Q ss_pred CccEEEE
Q 035721 156 AWDGLIL 162 (308)
Q Consensus 156 ~v~~~vl 162 (308)
.+.|+|+
T Consensus 285 ~l~GiIl 291 (340)
T COG0552 285 GLDGIIL 291 (340)
T ss_pred CCceEEE
Confidence 4778886
No 417
>PRK08226 short chain dehydrogenase; Provisional
Probab=32.12 E-value=81 Score=24.35 Aligned_cols=32 Identities=19% Similarity=0.213 Sum_probs=23.3
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|..+.-. ..+++.|.++|++|+..+..
T Consensus 8 ~~lItG~s~giG---~~la~~l~~~G~~Vv~~~r~ 39 (263)
T PRK08226 8 TALITGALQGIG---EGIARVFARHGANLILLDIS 39 (263)
T ss_pred EEEEeCCCChHH---HHHHHHHHHCCCEEEEecCC
Confidence 456666554333 56888999999999999764
No 418
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=32.12 E-value=69 Score=25.87 Aligned_cols=21 Identities=33% Similarity=0.276 Sum_probs=17.2
Q ss_pred CCCEEEEEechhhHHHHHHHH
Q 035721 131 DLPAFLYSESLGGAIALYITL 151 (308)
Q Consensus 131 ~~~~~l~G~S~Gg~~a~~~a~ 151 (308)
..+..+.|||+|=+.|+.++.
T Consensus 84 ~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 84 VKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCceeecccHhHHHHHHHcc
Confidence 447799999999998887665
No 419
>PF00578 AhpC-TSA: AhpC/TSA family; InterPro: IPR000866 Peroxiredoxins (Prxs) are a ubiquitous family of antioxidant enzymes that also control cytokine-induced peroxide levels which mediate signal transduction in mammalian cells. Prxs can be regulated by changes to phosphorylation, redox and possibly oligomerisation states. Prxs are divided into three classes: typical 2-Cys Prxs; atypical 2-Cys Prxs; and 1-Cys Prxs. All Prxs share the same basic catalytic mechanism, in which an active-site cysteine (the peroxidatic cysteine) is oxidised to a sulphenic acid by the peroxide substrate. The recycling of the sulphenic acid back to a thiol is what distinguishes the three enzyme classes. Using crystal structures, a detailed catalytic cycle has been derived for typical 2-Cys Prxs, including a model for the redox-regulated oligomeric state proposed to control enzyme activity []. Alkyl hydroperoxide reductase (AhpC) is responsible for directly reducing organic hyperoxides in its reduced dithiol form. Thiol specific antioxidant (TSA) is a physiologically important antioxidant which constitutes an enzymatic defence against sulphur-containing radicals. This family contains AhpC and TSA, as well as related proteins.; GO: 0016209 antioxidant activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QMV_A 1PRX_B 3HJP_C 3HA9_A 2V41_G 2V32_C 2V2G_C 3LWA_A 3IA1_B 1ZYE_G ....
Probab=32.10 E-value=1.5e+02 Score=19.43 Aligned_cols=57 Identities=11% Similarity=-0.074 Sum_probs=32.6
Q ss_pred cceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccc--hH---HHHHHHHHHHcCCeEEEecC
Q 035721 32 SSEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESS--WI---VQLTAVLFAKSGFATCAIDH 94 (308)
Q Consensus 32 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~--~~---~~~~~~~l~~~g~~v~~~d~ 94 (308)
....+++.+|..+....+ .+ +++||++-....+.. .. +..+.+.+.+.|..++.+..
T Consensus 6 P~f~l~~~~g~~~~l~~l---~g---k~~vl~f~~~~~c~~c~~~l~~l~~~~~~~~~~~~~vi~is~ 67 (124)
T PF00578_consen 6 PDFTLTDSDGKTVSLSDL---KG---KPVVLFFWPTAWCPFCQAELPELNELYKKYKDKGVQVIGIST 67 (124)
T ss_dssp GCEEEETTTSEEEEGGGG---TT---SEEEEEEESTTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEES
T ss_pred CCcEeECCCCCEEEHHHH---CC---CcEEEEEeCccCccccccchhHHHHHhhhhccceEEeeeccc
Confidence 345667788877666444 22 666666655422221 11 23445556666899998864
No 420
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=31.95 E-value=1.4e+02 Score=22.71 Aligned_cols=33 Identities=18% Similarity=0.156 Sum_probs=23.1
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQG 96 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 96 (308)
.+++.|..+.-. ..+++.|.++|++|+..+...
T Consensus 10 ~vlItGas~~iG---~~la~~l~~~G~~v~~~~~~~ 42 (252)
T PRK08220 10 TVWVTGAAQGIG---YAVALAFVEAGAKVIGFDQAF 42 (252)
T ss_pred EEEEeCCCchHH---HHHHHHHHHCCCEEEEEecch
Confidence 355556444333 468888999999999998653
No 421
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=31.91 E-value=71 Score=27.31 Aligned_cols=33 Identities=21% Similarity=0.047 Sum_probs=24.5
Q ss_pred EEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCC
Q 035721 62 CVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGH 97 (308)
Q Consensus 62 v~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~ 97 (308)
|++-|..|... ..+++.|.++|+.|+++|....
T Consensus 123 ILVTGatGFIG---s~Lv~~Ll~~G~~V~~ldr~~~ 155 (436)
T PLN02166 123 IVVTGGAGFVG---SHLVDKLIGRGDEVIVIDNFFT 155 (436)
T ss_pred EEEECCccHHH---HHHHHHHHHCCCEEEEEeCCCC
Confidence 66666555443 5788999999999999996543
No 422
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=31.91 E-value=88 Score=23.59 Aligned_cols=32 Identities=19% Similarity=0.248 Sum_probs=23.5
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|..+.-. ..+++.|.++|++|+..+..
T Consensus 7 ~~lVtGas~~iG---~~ia~~l~~~G~~v~~~~r~ 38 (235)
T PRK06550 7 TVLITGAASGIG---LAQARAFLAQGAQVYGVDKQ 38 (235)
T ss_pred EEEEcCCCchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 456667554433 57889999999999998865
No 423
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=31.81 E-value=69 Score=25.41 Aligned_cols=47 Identities=15% Similarity=0.198 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHHHHHhcCCCccEEEEe
Q 035721 114 VEDAISFFDSFRARHAPDLPAFLYSESLGGAIALYITLRQKGAWDGLILN 163 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~vl~ 163 (308)
..-+..+++.++.+ ++.++.=+|-.+|+. +..+|.++..+|.|+.+.
T Consensus 58 ~~k~~~~~~kl~L~--~G~~lLDiGCGWG~l-~~~aA~~y~v~V~GvTlS 104 (283)
T COG2230 58 RAKLDLILEKLGLK--PGMTLLDIGCGWGGL-AIYAAEEYGVTVVGVTLS 104 (283)
T ss_pred HHHHHHHHHhcCCC--CCCEEEEeCCChhHH-HHHHHHHcCCEEEEeeCC
Confidence 34555666666666 788888899999986 566777776666666653
No 424
>PRK06194 hypothetical protein; Provisional
Probab=31.75 E-value=75 Score=24.98 Aligned_cols=32 Identities=22% Similarity=0.142 Sum_probs=23.5
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|..+.-. ..+++.|.++|+.|++.|..
T Consensus 8 ~vlVtGasggIG---~~la~~l~~~G~~V~~~~r~ 39 (287)
T PRK06194 8 VAVITGAASGFG---LAFARIGAALGMKLVLADVQ 39 (287)
T ss_pred EEEEeCCccHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 466777554433 47888899999999998863
No 425
>PRK07454 short chain dehydrogenase; Provisional
Probab=31.73 E-value=83 Score=23.88 Aligned_cols=32 Identities=22% Similarity=0.396 Sum_probs=22.5
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|..+.-. ..+++.|.++|++|++.+..
T Consensus 8 ~vlItG~sg~iG---~~la~~l~~~G~~V~~~~r~ 39 (241)
T PRK07454 8 RALITGASSGIG---KATALAFAKAGWDLALVARS 39 (241)
T ss_pred EEEEeCCCchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 455556443322 57888999999999999863
No 426
>COG1540 Uncharacterized proteins, homologs of lactam utilization protein B [General function prediction only]
Probab=31.69 E-value=1.2e+02 Score=23.28 Aligned_cols=49 Identities=14% Similarity=0.107 Sum_probs=34.1
Q ss_pred ceeEEcCCCcEEEEEEecCCCCCCCcceEEEEccCCCccchHHHHHHHHHHHcCCeEEEe
Q 035721 33 SEYITNSRGLRLFTQWWTPLPPAKTLGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAI 92 (308)
Q Consensus 33 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~ 92 (308)
...++..||..+...- + =||+||=+-..-.+.+.+-..|.+.|..|..+
T Consensus 203 ~g~v~a~dG~~v~v~a----d-------siCvHGD~p~Al~~~~riR~~l~~~gi~v~~~ 251 (252)
T COG1540 203 EGKVTAIDGEWVAVEA----D-------SICVHGDNPHALAFARRIRAALEAEGIKVAAL 251 (252)
T ss_pred cCceEeeCCcEEeeec----c-------eEEEcCCCHHHHHHHHHHHHHHHHcCCeeecC
Confidence 3467777887666532 2 39999976555556677888888889887653
No 427
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=31.66 E-value=80 Score=25.57 Aligned_cols=22 Identities=27% Similarity=0.428 Sum_probs=18.0
Q ss_pred CCCEEEEEechhhHHHHHHHHh
Q 035721 131 DLPAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 131 ~~~~~l~G~S~Gg~~a~~~a~~ 152 (308)
-.+-++.|-|.|+.+|..++..
T Consensus 95 l~p~~i~GsSaGAivaa~~~~~ 116 (323)
T cd07231 95 LLPRVIAGSSVGSIVCAIIATR 116 (323)
T ss_pred CCCCEEEEECHHHHHHHHHHcC
Confidence 3366799999999999988764
No 428
>PRK09936 hypothetical protein; Provisional
Probab=31.63 E-value=1.3e+02 Score=24.00 Aligned_cols=28 Identities=21% Similarity=0.099 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHcCCeEEEecCCCCcCCC
Q 035721 74 IVQLTAVLFAKSGFATCAIDHQGHGFSD 101 (308)
Q Consensus 74 ~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 101 (308)
.|+.+.+.+...|++.+.+.+-++|+++
T Consensus 39 qWq~~~~~~~~~G~~tLivQWt~yG~~~ 66 (296)
T PRK09936 39 QWQGLWSQLRLQGFDTLVVQWTRYGDAD 66 (296)
T ss_pred HHHHHHHHHHHcCCcEEEEEeeeccCCC
Confidence 5788999999999999999999999883
No 429
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=31.61 E-value=80 Score=25.74 Aligned_cols=33 Identities=15% Similarity=0.436 Sum_probs=24.0
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQG 96 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 96 (308)
.+++-|..+.-. ..+++.|.+.|+.|+++|.+.
T Consensus 2 ~vlVTGatGfIG---~~l~~~L~~~G~~V~~~~r~~ 34 (343)
T TIGR01472 2 IALITGITGQDG---SYLAEFLLEKGYEVHGLIRRS 34 (343)
T ss_pred eEEEEcCCCcHH---HHHHHHHHHCCCEEEEEecCC
Confidence 356666555443 468888989999999998653
No 430
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=31.60 E-value=83 Score=24.10 Aligned_cols=33 Identities=21% Similarity=0.174 Sum_probs=23.3
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQG 96 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 96 (308)
++++-|..+.-. ..+++.|.++|+.|+.++.+.
T Consensus 4 ~vlItG~sg~iG---~~la~~L~~~g~~vi~~~r~~ 36 (256)
T PRK12745 4 VALVTGGRRGIG---LGIARALAAAGFDLAINDRPD 36 (256)
T ss_pred EEEEeCCCchHH---HHHHHHHHHCCCEEEEEecCc
Confidence 455666443322 578889999999999998653
No 431
>PRK03094 hypothetical protein; Provisional
Probab=31.45 E-value=62 Score=19.89 Aligned_cols=19 Identities=5% Similarity=0.179 Sum_probs=15.9
Q ss_pred HHHHHHHHHcCCeEEEecC
Q 035721 76 QLTAVLFAKSGFATCAIDH 94 (308)
Q Consensus 76 ~~~~~~l~~~g~~v~~~d~ 94 (308)
..+.+.|.++||.|+-++-
T Consensus 11 s~i~~~L~~~GYeVv~l~~ 29 (80)
T PRK03094 11 TDVQQALKQKGYEVVQLRS 29 (80)
T ss_pred HHHHHHHHHCCCEEEecCc
Confidence 5688999999999987753
No 432
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=31.35 E-value=88 Score=23.91 Aligned_cols=32 Identities=19% Similarity=0.158 Sum_probs=23.7
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|..+.-. ..+++.|.++|+.|++.+..
T Consensus 3 ~vlItGa~g~lG---~~l~~~l~~~g~~v~~~~r~ 34 (255)
T TIGR01963 3 TALVTGAASGIG---LAIALALAAAGANVVVNDLG 34 (255)
T ss_pred EEEEcCCcchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 466667554433 57888998999999999875
No 433
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=31.27 E-value=2.9e+02 Score=22.45 Aligned_cols=76 Identities=22% Similarity=0.209 Sum_probs=45.2
Q ss_pred ceEEEEccCCCccchHHHHHHHHHHHc-CCeEEEec----CCCC--cCCCC----------------ccccCCCcchHHH
Q 035721 59 GVLCVVHGFTGESSWIVQLTAVLFAKS-GFATCAID----HQGH--GFSDG----------------LVAHIPDLNPVVE 115 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d----~~G~--G~s~~----------------~~~~~~~~~~~~~ 115 (308)
+.++++-|-.+++. ..++=.|+++ |-.|+..| ++|. |...+ ++...++..++..
T Consensus 3 ~~~i~I~GPTAsGK---T~lai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa~~f~~ 79 (308)
T COG0324 3 PKLIVIAGPTASGK---TALAIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSAAEFQR 79 (308)
T ss_pred ccEEEEECCCCcCH---HHHHHHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccHHHHHH
Confidence 45666767555554 2344445544 67899998 4443 22111 2223457778888
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEEec
Q 035721 116 DAISFFDSFRARHAPDLPAFLYSES 140 (308)
Q Consensus 116 d~~~~l~~~~~~~~~~~~~~l~G~S 140 (308)
++...++.+..+ +.-.+++|-|
T Consensus 80 ~a~~~i~~i~~r---gk~pIlVGGT 101 (308)
T COG0324 80 DALAAIDDILAR---GKLPILVGGT 101 (308)
T ss_pred HHHHHHHHHHhC---CCCcEEEccH
Confidence 999999888875 2245566654
No 434
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=31.24 E-value=59 Score=24.51 Aligned_cols=30 Identities=23% Similarity=0.209 Sum_probs=21.7
Q ss_pred EEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 63 VVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 63 ~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
++.|..+. .-..+++.|.++|++|+..+.+
T Consensus 2 lItG~~g~---iG~~la~~l~~~G~~v~~~~r~ 31 (239)
T TIGR01830 2 LVTGASRG---IGRAIALKLAKEGAKVIITYRS 31 (239)
T ss_pred EEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 45564433 3357889999999999999865
No 435
>PRK07024 short chain dehydrogenase; Provisional
Probab=31.11 E-value=79 Score=24.37 Aligned_cols=32 Identities=16% Similarity=0.193 Sum_probs=22.9
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|..+.-. ..+++.|.++|++|+..+.+
T Consensus 4 ~vlItGas~gIG---~~la~~l~~~G~~v~~~~r~ 35 (257)
T PRK07024 4 KVFITGASSGIG---QALAREYARQGATLGLVARR 35 (257)
T ss_pred EEEEEcCCcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 356666544322 57888999999999999864
No 436
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=31.04 E-value=85 Score=24.25 Aligned_cols=20 Identities=15% Similarity=0.106 Sum_probs=17.7
Q ss_pred EEEEechhhHHHHHHHHhcC
Q 035721 135 FLYSESLGGAIALYITLRQK 154 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~~p 154 (308)
.++|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999999988654
No 437
>PRK06114 short chain dehydrogenase; Provisional
Probab=31.02 E-value=85 Score=24.13 Aligned_cols=32 Identities=22% Similarity=0.247 Sum_probs=23.0
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
++++.|..+.-. ..+++.|.++|++|+..+.+
T Consensus 10 ~~lVtG~s~gIG---~~ia~~l~~~G~~v~~~~r~ 41 (254)
T PRK06114 10 VAFVTGAGSGIG---QRIAIGLAQAGADVALFDLR 41 (254)
T ss_pred EEEEECCCchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 455666444322 57889999999999998864
No 438
>PRK03846 adenylylsulfate kinase; Provisional
Probab=30.97 E-value=1.3e+02 Score=22.17 Aligned_cols=37 Identities=19% Similarity=0.292 Sum_probs=24.9
Q ss_pred CcceEEEEccCCCccch-HHHHHHHHHHHcCCeEEEec
Q 035721 57 TLGVLCVVHGFTGESSW-IVQLTAVLFAKSGFATCAID 93 (308)
Q Consensus 57 ~~~~vv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d 93 (308)
.+|.+|.+.|..+++.. ..+.+...|...|+.++.+|
T Consensus 22 ~~~~~i~i~G~~GsGKSTla~~l~~~l~~~~~~~~~ld 59 (198)
T PRK03846 22 HKGVVLWFTGLSGSGKSTVAGALEEALHELGVSTYLLD 59 (198)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCCEEEEc
Confidence 36678888887766552 34456666666677777776
No 439
>PLN02206 UDP-glucuronate decarboxylase
Probab=30.93 E-value=65 Score=27.58 Aligned_cols=34 Identities=21% Similarity=0.130 Sum_probs=25.0
Q ss_pred EEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCc
Q 035721 62 CVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHG 98 (308)
Q Consensus 62 v~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G 98 (308)
|++-|..|... ..+++.|.++|+.|+++|....+
T Consensus 122 ILVTGatGfIG---s~Lv~~Ll~~G~~V~~ld~~~~~ 155 (442)
T PLN02206 122 VVVTGGAGFVG---SHLVDRLMARGDSVIVVDNFFTG 155 (442)
T ss_pred EEEECcccHHH---HHHHHHHHHCcCEEEEEeCCCcc
Confidence 66666555444 57889999999999999865443
No 440
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=30.91 E-value=2.9e+02 Score=22.32 Aligned_cols=35 Identities=11% Similarity=0.090 Sum_probs=21.0
Q ss_pred CEEEEEec----------hhhHHHHHHHHhcCCCccEEEEeCCcCCCC
Q 035721 133 PAFLYSES----------LGGAIALYITLRQKGAWDGLILNGAMCGIS 170 (308)
Q Consensus 133 ~~~l~G~S----------~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 170 (308)
++++..|+ -|+..+..+|..+. .-++.++|...+.
T Consensus 233 KVIigt~avl~NGgl~~~~G~~~vAlaAk~h~---vPv~VlAp~yKLs 277 (353)
T KOG1465|consen 233 KVIIGTHAVLANGGLRAPSGVHTVALAAKHHS---VPVIVLAPMYKLS 277 (353)
T ss_pred eEEEEeeeEecCCCeeccchHHHHHHHHHhcC---CcEEEecchhhcC
Confidence 67776665 35666666666553 4466666665544
No 441
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=30.87 E-value=95 Score=23.63 Aligned_cols=32 Identities=22% Similarity=0.270 Sum_probs=23.4
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++-|..+.-. ..+++.|.++|++|+..+..
T Consensus 7 ~vlItGasg~iG---~~l~~~l~~~G~~V~~~~r~ 38 (251)
T PRK07231 7 VAIVTGASSGIG---EGIARRFAAEGARVVVTDRN 38 (251)
T ss_pred EEEEECCCChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 456666554433 47888899999999998865
No 442
>PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional
Probab=30.85 E-value=1.6e+02 Score=21.41 Aligned_cols=42 Identities=14% Similarity=0.256 Sum_probs=29.5
Q ss_pred cceEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCcC
Q 035721 58 LGVLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHGF 99 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~ 99 (308)
.++|+.+-|..+++. .....+...|...|++|-.+-+.|||.
T Consensus 5 ~~~ii~ivG~sgsGKTTLi~~li~~l~~~g~~vg~Ik~~~~~~ 47 (173)
T PRK10751 5 MIPLLAIAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDM 47 (173)
T ss_pred CceEEEEECCCCChHHHHHHHHHHHHhhcCCeEEEEEEcCCCc
Confidence 445666777666554 345788888888899888887766654
No 443
>COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain [General function prediction only]
Probab=30.85 E-value=89 Score=17.84 Aligned_cols=49 Identities=10% Similarity=0.068 Sum_probs=31.7
Q ss_pred EEEeeCCCcccChHHHHHHHHHhcCCCCcEEEecCCcccccCCchhhHHHhh
Q 035721 254 LICHGGDDVVCDPACVEELYKRAASKDKTLSIYPGMWHQLIGEPEENVELVF 305 (308)
Q Consensus 254 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~ 305 (308)
-+|.|..=+.+......++... .+++++..=.+||...+.|+++.+.+.
T Consensus 6 RFIAGA~CP~C~~~Dtl~mW~E---n~ve~vECV~CG~~~~~~~k~v~~~v~ 54 (66)
T COG3529 6 RFIAGAVCPACQAQDTLAMWRE---NNVEIVECVKCGHHMREADKEVRTHVR 54 (66)
T ss_pred hhhccCCCcccchhhHHHHHHh---cCCceEehhhcchHhhhccHHHHhhhC
Confidence 3566665555544444444443 478888888899988877777666543
No 444
>PRK07035 short chain dehydrogenase; Provisional
Probab=30.77 E-value=85 Score=24.02 Aligned_cols=31 Identities=19% Similarity=0.252 Sum_probs=22.4
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDH 94 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 94 (308)
.+++-|..+.-. ..+++.|.++|++|+..+.
T Consensus 10 ~vlItGas~gIG---~~l~~~l~~~G~~Vi~~~r 40 (252)
T PRK07035 10 IALVTGASRGIG---EAIAKLLAQQGAHVIVSSR 40 (252)
T ss_pred EEEEECCCcHHH---HHHHHHHHHCCCEEEEEeC
Confidence 456666544333 5788899999999999985
No 445
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=30.71 E-value=2.3e+02 Score=22.20 Aligned_cols=61 Identities=11% Similarity=0.167 Sum_probs=38.8
Q ss_pred EEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechh
Q 035721 63 VVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLG 142 (308)
Q Consensus 63 ~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~G 142 (308)
++||---+.. ...+++.|.+.|+.|.-.-. .-+-.++|.+.++.+..+. .++++.-.+|
T Consensus 13 lL~G~ivdtN--a~~la~~L~~~G~~v~~~~~---------------VgD~~~~I~~~l~~a~~r~----D~vI~tGGLG 71 (255)
T COG1058 13 LLSGRIVDTN--AAFLADELTELGVDLARITT---------------VGDNPDRIVEALREASERA----DVVITTGGLG 71 (255)
T ss_pred eecCceecch--HHHHHHHHHhcCceEEEEEe---------------cCCCHHHHHHHHHHHHhCC----CEEEECCCcC
Confidence 4566554444 25689999999998876643 3333566666666666543 7777766666
Q ss_pred hH
Q 035721 143 GA 144 (308)
Q Consensus 143 g~ 144 (308)
-.
T Consensus 72 PT 73 (255)
T COG1058 72 PT 73 (255)
T ss_pred CC
Confidence 43
No 446
>PRK13948 shikimate kinase; Provisional
Probab=30.69 E-value=92 Score=22.79 Aligned_cols=34 Identities=12% Similarity=0.130 Sum_probs=24.6
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHc-CCeEEEecC
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKS-GFATCAIDH 94 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~ 94 (308)
.+..|++.|+.+++. ..+...|+++ |+.++-.|.
T Consensus 9 ~~~~I~LiG~~GsGK---STvg~~La~~lg~~~iD~D~ 43 (182)
T PRK13948 9 PVTWVALAGFMGTGK---SRIGWELSRALMLHFIDTDR 43 (182)
T ss_pred CCCEEEEECCCCCCH---HHHHHHHHHHcCCCEEECCH
Confidence 556888999888776 3456666653 888888774
No 447
>PLN02572 UDP-sulfoquinovose synthase
Probab=30.64 E-value=95 Score=26.59 Aligned_cols=30 Identities=27% Similarity=0.401 Sum_probs=22.5
Q ss_pred EEEccCCCccchHHHHHHHHHHHcCCeEEEecC
Q 035721 62 CVVHGFTGESSWIVQLTAVLFAKSGFATCAIDH 94 (308)
Q Consensus 62 v~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 94 (308)
|++-|..|.-. ..+++.|.++|+.|+++|.
T Consensus 50 VLVTGatGfIG---s~Lv~~L~~~G~~V~~~d~ 79 (442)
T PLN02572 50 VMVIGGDGYCG---WATALHLSKRGYEVAIVDN 79 (442)
T ss_pred EEEECCCcHHH---HHHHHHHHHCCCeEEEEec
Confidence 55666555443 5788999999999999984
No 448
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=30.47 E-value=88 Score=23.66 Aligned_cols=32 Identities=19% Similarity=0.215 Sum_probs=23.1
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|..+.-. ..+++.|.++|+.|+.++..
T Consensus 7 ~ilItGasg~iG---~~l~~~l~~~g~~v~~~~r~ 38 (246)
T PRK05653 7 TALVTGASRGIG---RAIALRLAADGAKVVIYDSN 38 (246)
T ss_pred EEEEECCCcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 466777554433 57888899999999888753
No 449
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=30.46 E-value=1.2e+02 Score=21.57 Aligned_cols=21 Identities=19% Similarity=0.279 Sum_probs=17.6
Q ss_pred HHHHHHHHHHcCCeEEEecCC
Q 035721 75 VQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 75 ~~~~~~~l~~~g~~v~~~d~~ 95 (308)
-..++..|+++|++|+.+|.=
T Consensus 17 a~~la~~l~~~g~~vllvD~D 37 (179)
T cd02036 17 TANLGTALAQLGYKVVLIDAD 37 (179)
T ss_pred HHHHHHHHHhCCCeEEEEeCC
Confidence 357888999999999999864
No 450
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=30.45 E-value=94 Score=23.51 Aligned_cols=32 Identities=22% Similarity=0.240 Sum_probs=23.4
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
++++.|..+.-. ..+++.|.++|+.|++...+
T Consensus 2 ~~lItG~sg~iG---~~la~~l~~~G~~v~~~~r~ 33 (242)
T TIGR01829 2 IALVTGGMGGIG---TAICQRLAKDGYRVAANCGP 33 (242)
T ss_pred EEEEECCCChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 467777655443 46888999999999887653
No 451
>KOG2316 consensus Predicted ATPase (PP-loop superfamily) [General function prediction only]
Probab=30.15 E-value=1.8e+02 Score=22.12 Aligned_cols=63 Identities=16% Similarity=0.156 Sum_probs=39.1
Q ss_pred HHHHHHHc-CCeEEEecCCCCcCCCCc-cccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHH
Q 035721 78 TAVLFAKS-GFATCAIDHQGHGFSDGL-VAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIAL 147 (308)
Q Consensus 78 ~~~~l~~~-g~~v~~~d~~G~G~s~~~-~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~ 147 (308)
.++.+++. |..++.-..+ |.|... ..+..+-.+-++|+.+++...+.+ -.-+=|.|.|+.+.-
T Consensus 55 ~i~lyaecm~lPlyrr~i~--g~s~nq~l~Y~~t~~DEvEDLy~ll~~VK~~-----~p~~eaVS~GAIlS~ 119 (277)
T KOG2316|consen 55 VIDLYAECMGLPLYRRRIR--GRSINQKLQYTKTEGDEVEDLYELLKTVKEK-----IPDVEAVSVGAILSD 119 (277)
T ss_pred HHHHHHHHhcCceeeeecc--CcccccccccccCCCchHHHHHHHHHHHHhh-----CCCceeeehhhhHhH
Confidence 34555543 3444444444 444432 223346667789999999999885 336889999987654
No 452
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=29.88 E-value=44 Score=29.35 Aligned_cols=24 Identities=21% Similarity=-0.054 Sum_probs=19.0
Q ss_pred CCCCEEEEEechhhHHHHHHHHhc
Q 035721 130 PDLPAFLYSESLGGAIALYITLRQ 153 (308)
Q Consensus 130 ~~~~~~l~G~S~Gg~~a~~~a~~~ 153 (308)
+-.+-.++|||+|=+.|+..|.-.
T Consensus 263 GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 263 AIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred CCCCCEEeecCHHHHHHHHHhCCC
Confidence 344779999999999888777644
No 453
>PRK06101 short chain dehydrogenase; Provisional
Probab=29.73 E-value=87 Score=23.84 Aligned_cols=31 Identities=23% Similarity=0.313 Sum_probs=22.1
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDH 94 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 94 (308)
.+++-|..+.-. ..+++.|.++|++|++.+.
T Consensus 3 ~vlItGas~giG---~~la~~L~~~G~~V~~~~r 33 (240)
T PRK06101 3 AVLITGATSGIG---KQLALDYAKQGWQVIACGR 33 (240)
T ss_pred EEEEEcCCcHHH---HHHHHHHHhCCCEEEEEEC
Confidence 355666544333 5788899999999999875
No 454
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.53 E-value=80 Score=25.36 Aligned_cols=38 Identities=11% Similarity=0.150 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEec--hhhHHHHHHHHh
Q 035721 114 VEDAISFFDSFRARHAPDLPAFLYSES--LGGAIALYITLR 152 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~~~~~~~l~G~S--~Gg~~a~~~a~~ 152 (308)
...+.+++++.+.+. .+.++.++|.| +|..+|..+..+
T Consensus 143 p~aii~lL~~~~i~l-~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDL-TGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCC-CCCEEEEECCCCccHHHHHHHHHHC
Confidence 456677777765543 67799999997 999999988764
No 455
>PRK07478 short chain dehydrogenase; Provisional
Probab=29.49 E-value=98 Score=23.74 Aligned_cols=32 Identities=19% Similarity=0.329 Sum_probs=23.1
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|..+.-. ..+++.|.++|++|+..+..
T Consensus 8 ~~lItGas~giG---~~ia~~l~~~G~~v~~~~r~ 39 (254)
T PRK07478 8 VAIITGASSGIG---RAAAKLFAREGAKVVVGARR 39 (254)
T ss_pred EEEEeCCCChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 456667554433 57889999999999998753
No 456
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=29.41 E-value=77 Score=24.00 Aligned_cols=15 Identities=13% Similarity=0.364 Sum_probs=12.3
Q ss_pred HHHHHcCCeEEEecC
Q 035721 80 VLFAKSGFATCAIDH 94 (308)
Q Consensus 80 ~~l~~~g~~v~~~d~ 94 (308)
..|+++|+.|+++|.
T Consensus 53 ~~LA~~G~~V~avD~ 67 (218)
T PRK13255 53 LWLAEQGHEVLGVEL 67 (218)
T ss_pred HHHHhCCCeEEEEcc
Confidence 346678999999996
No 457
>cd02022 DPCK Dephospho-coenzyme A kinase (DPCK, EC 2.7.1.24) catalyzes the phosphorylation of dephosphocoenzyme A (dCoA) to yield CoA, which is the final step in CoA biosynthesis.
Probab=29.36 E-value=80 Score=22.86 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=23.4
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGH 97 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~ 97 (308)
+|.+.|..+++. ..++..|.+.|+.|+..|.-.+
T Consensus 1 ii~itG~~gsGK---st~~~~l~~~g~~~i~~D~~~~ 34 (179)
T cd02022 1 IIGLTGGIGSGK---STVAKLLKELGIPVIDADKIAH 34 (179)
T ss_pred CEEEECCCCCCH---HHHHHHHHHCCCCEEecCHHHH
Confidence 366777766665 2456677778999998886543
No 458
>PRK06483 dihydromonapterin reductase; Provisional
Probab=29.36 E-value=91 Score=23.58 Aligned_cols=32 Identities=9% Similarity=-0.038 Sum_probs=23.2
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++-|..+.-. ..+++.|.++|++|+..+..
T Consensus 4 ~vlItGas~gIG---~~ia~~l~~~G~~V~~~~r~ 35 (236)
T PRK06483 4 PILITGAGQRIG---LALAWHLLAQGQPVIVSYRT 35 (236)
T ss_pred eEEEECCCChHH---HHHHHHHHHCCCeEEEEeCC
Confidence 456666554333 57888999999999998764
No 459
>PRK06849 hypothetical protein; Provisional
Probab=29.34 E-value=1.1e+02 Score=25.50 Aligned_cols=22 Identities=23% Similarity=0.160 Sum_probs=18.6
Q ss_pred HHHHHHHHHcCCeEEEecCCCC
Q 035721 76 QLTAVLFAKSGFATCAIDHQGH 97 (308)
Q Consensus 76 ~~~~~~l~~~g~~v~~~d~~G~ 97 (308)
-.+++.|.+.|++|++.|....
T Consensus 18 l~iar~l~~~G~~Vi~~d~~~~ 39 (389)
T PRK06849 18 LELARLFHNAGHTVILADSLKY 39 (389)
T ss_pred HHHHHHHHHCCCEEEEEeCCch
Confidence 3688999999999999997653
No 460
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=29.26 E-value=1.1e+02 Score=27.23 Aligned_cols=34 Identities=29% Similarity=0.216 Sum_probs=24.2
Q ss_pred ceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 59 GVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.-+++|-|..+... ..+++.|.++|++|++++..
T Consensus 80 gKvVLVTGATGgIG---~aLAr~LLk~G~~Vval~Rn 113 (576)
T PLN03209 80 EDLAFVAGATGKVG---SRTVRELLKLGFRVRAGVRS 113 (576)
T ss_pred CCEEEEECCCCHHH---HHHHHHHHHCCCeEEEEeCC
Confidence 34666777655433 56788898899999988754
No 461
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=29.26 E-value=2.1e+02 Score=23.27 Aligned_cols=66 Identities=15% Similarity=0.244 Sum_probs=41.0
Q ss_pred EEEccCCCccchHHHHHHHHHHHcCCeEEEecCCC-CcC----CCCccc-cCCCcchHHHHHHHHHHHHHHh
Q 035721 62 CVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQG-HGF----SDGLVA-HIPDLNPVVEDAISFFDSFRAR 127 (308)
Q Consensus 62 v~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G-~G~----s~~~~~-~~~~~~~~~~d~~~~l~~~~~~ 127 (308)
|.+.|.......-.+.+.+.+.+.+.+.+++|.-+ +|. |..+.. ........+.|+.++++.++.+
T Consensus 2 iYlt~~~a~~~~~~~~~~~~i~~t~lNavVIDvKdd~G~i~y~s~~~~~~~~ga~~~~i~D~~~l~~~l~e~ 73 (316)
T PF13200_consen 2 IYLTAYSAGSPERLDKLLDLIKRTELNAVVIDVKDDDGNITYDSQVPLAREIGAVKPYIKDLKALVKKLKEH 73 (316)
T ss_pred EEechhhcCCHHHHHHHHHHHHhcCCceEEEEEecCCceEEecCCCchhhhcccccccccCHHHHHHHHHHC
Confidence 45555544442245788888988899999999874 232 111111 1112233357999999999887
No 462
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=29.25 E-value=1.2e+02 Score=23.10 Aligned_cols=39 Identities=21% Similarity=0.116 Sum_probs=26.4
Q ss_pred eEEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCc
Q 035721 60 VLCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHG 98 (308)
Q Consensus 60 ~vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G 98 (308)
+|.+..+-||.+. ..--.++..|+++|++|+.+|.=.+|
T Consensus 3 iI~v~s~KGGvGKTt~a~nla~~la~~g~~VlliD~D~q~ 42 (246)
T TIGR03371 3 VIAIVGVKGGVGKTTLTANLASALKLLGEPVLAIDLDPQN 42 (246)
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence 3555554444443 23347888899899999999986554
No 463
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=29.16 E-value=4e+02 Score=23.42 Aligned_cols=24 Identities=8% Similarity=0.066 Sum_probs=17.5
Q ss_pred HHHHHHHHHcC-CeEEEecCCCCcC
Q 035721 76 QLTAVLFAKSG-FATCAIDHQGHGF 99 (308)
Q Consensus 76 ~~~~~~l~~~g-~~v~~~d~~G~G~ 99 (308)
..++..|.+.| +.|-.+|......
T Consensus 26 ~~lAa~L~~~G~~~V~iiD~~~~~~ 50 (497)
T TIGR02026 26 AYIGGALLDAGYHDVTFLDAMTGPL 50 (497)
T ss_pred HHHHHHHHhcCCcceEEecccccCC
Confidence 46677787889 6899999765443
No 464
>PHA02114 hypothetical protein
Probab=29.12 E-value=1.1e+02 Score=19.57 Aligned_cols=34 Identities=12% Similarity=0.170 Sum_probs=25.0
Q ss_pred ceEEEEccCCCccchHHHHHHHHHHHcCCeEEEec
Q 035721 59 GVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAID 93 (308)
Q Consensus 59 ~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d 93 (308)
.+||+=--+..+.. -|-.++..|.+.||.|++-.
T Consensus 83 gtivldvn~amsr~-pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 83 GTIVLDVNYAMSRA-PWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred CeEEEEehhhhccC-cHHHHHHHHHhcCceeeehh
Confidence 46776666666655 45678889999999999854
No 465
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=29.11 E-value=81 Score=24.58 Aligned_cols=84 Identities=19% Similarity=0.189 Sum_probs=44.2
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCC-------eEEEecCCCCcCCCCccc------cCCCcchH--HHHHHHHHHHHH
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGF-------ATCAIDHQGHGFSDGLVA------HIPDLNPV--VEDAISFFDSFR 125 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~-------~v~~~d~~G~G~s~~~~~------~~~~~~~~--~~d~~~~l~~~~ 125 (308)
-+++.|.|...-..-+.+...+..+|. +++.+|..|.=..+...- ........ ..++.++++..+
T Consensus 27 riv~~GAGsAg~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~~L~eav~~~k 106 (255)
T PF03949_consen 27 RIVFFGAGSAGIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFARKTNPEKDWGSLLEAVKGAK 106 (255)
T ss_dssp EEEEEB-SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHHBSSSTTT--SSHHHHHHCH-
T ss_pred EEEEeCCChhHHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhhccCcccccccCHHHHHHhcC
Confidence 455556554333234556666666676 699999988532222100 00011111 146666666554
Q ss_pred HhcCCCCCEEEEEec-hhhHHHHHHHH
Q 035721 126 ARHAPDLPAFLYSES-LGGAIALYITL 151 (308)
Q Consensus 126 ~~~~~~~~~~l~G~S-~Gg~~a~~~a~ 151 (308)
+-+++|-| .||.+.-....
T Consensus 107 -------PtvLIG~S~~~g~ft~evv~ 126 (255)
T PF03949_consen 107 -------PTVLIGLSGQGGAFTEEVVR 126 (255)
T ss_dssp --------SEEEECSSSTTSS-HHHHH
T ss_pred -------CCEEEEecCCCCcCCHHHHH
Confidence 66999999 88876655544
No 466
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=29.08 E-value=98 Score=23.80 Aligned_cols=31 Identities=19% Similarity=0.254 Sum_probs=22.8
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDH 94 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 94 (308)
++++-|..+.-. ..+++.|.++|++|+..+.
T Consensus 10 ~~lItGas~gIG---~aia~~l~~~G~~vv~~~~ 40 (251)
T PRK12481 10 VAIITGCNTGLG---QGMAIGLAKAGADIVGVGV 40 (251)
T ss_pred EEEEeCCCchHH---HHHHHHHHHCCCEEEEecC
Confidence 556777544333 5789999999999998864
No 467
>PRK07069 short chain dehydrogenase; Validated
Probab=29.07 E-value=92 Score=23.75 Aligned_cols=31 Identities=19% Similarity=0.219 Sum_probs=22.5
Q ss_pred EEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 62 CVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 62 v~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
+++.|..+.-. ..+++.|.++|++|+..+..
T Consensus 2 ilVtG~~~~iG---~~~a~~l~~~G~~v~~~~r~ 32 (251)
T PRK07069 2 AFITGAAGGLG---RAIARRMAEQGAKVFLTDIN 32 (251)
T ss_pred EEEECCCChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 45666544333 57888999999999999864
No 468
>PRK05866 short chain dehydrogenase; Provisional
Probab=29.07 E-value=91 Score=24.78 Aligned_cols=32 Identities=19% Similarity=0.294 Sum_probs=23.2
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++-|.++.-. ..+++.|.++|+.|++.+..
T Consensus 42 ~vlItGasggIG---~~la~~La~~G~~Vi~~~R~ 73 (293)
T PRK05866 42 RILLTGASSGIG---EAAAEQFARRGATVVAVARR 73 (293)
T ss_pred EEEEeCCCcHHH---HHHHHHHHHCCCEEEEEECC
Confidence 466666544333 57888999999999998764
No 469
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=29.03 E-value=1.1e+02 Score=24.71 Aligned_cols=34 Identities=21% Similarity=0.063 Sum_probs=23.3
Q ss_pred cceEEEEccCCCccc----hHHHHHHHHHHHcCCeEEE
Q 035721 58 LGVLCVVHGFTGESS----WIVQLTAVLFAKSGFATCA 91 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~----~~~~~~~~~l~~~g~~v~~ 91 (308)
++.++++||...... ..|..+++.|.++|+.++.
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl 215 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKL 215 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEE
Confidence 466777888654322 2367888888888888775
No 470
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=29.01 E-value=99 Score=23.54 Aligned_cols=32 Identities=25% Similarity=0.278 Sum_probs=22.5
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|..+.-. ..+++.|.++|+.|+.++..
T Consensus 5 ~ilItGas~~iG---~~la~~l~~~g~~v~~~~r~ 36 (250)
T TIGR03206 5 TAIVTGGGGGIG---GATCRRFAEEGAKVAVFDLN 36 (250)
T ss_pred EEEEeCCCChHH---HHHHHHHHHCCCEEEEecCC
Confidence 355666544332 57888999999999998753
No 471
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=28.89 E-value=97 Score=23.56 Aligned_cols=32 Identities=22% Similarity=0.243 Sum_probs=22.8
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++-|..+.-. ..+++.|.++|+.|++++..
T Consensus 8 ~ilItGasg~iG---~~l~~~l~~~g~~V~~~~r~ 39 (251)
T PRK12826 8 VALVTGAARGIG---RAIAVRLAADGAEVIVVDIC 39 (251)
T ss_pred EEEEcCCCCcHH---HHHHHHHHHCCCEEEEEeCC
Confidence 355666544433 56888898999999998764
No 472
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=28.85 E-value=70 Score=21.68 Aligned_cols=35 Identities=14% Similarity=0.059 Sum_probs=22.8
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQG 96 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 96 (308)
++...|..|+-..+ -.+++.|.++|++|...-.++
T Consensus 2 li~~~Gt~Ghv~P~-lala~~L~~rGh~V~~~~~~~ 36 (139)
T PF03033_consen 2 LIATGGTRGHVYPF-LALARALRRRGHEVRLATPPD 36 (139)
T ss_dssp EEEEESSHHHHHHH-HHHHHHHHHTT-EEEEEETGG
T ss_pred EEEEcCChhHHHHH-HHHHHHHhccCCeEEEeeccc
Confidence 45555666655433 478999999999997655443
No 473
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=28.61 E-value=1.1e+02 Score=25.02 Aligned_cols=36 Identities=14% Similarity=0.131 Sum_probs=25.7
Q ss_pred cceEEEEcc-CCCcc-c---hHHHHHHHHHHHcCCeEEEec
Q 035721 58 LGVLCVVHG-FTGES-S---WIVQLTAVLFAKSGFATCAID 93 (308)
Q Consensus 58 ~~~vv~~hG-~~~~~-~---~~~~~~~~~l~~~g~~v~~~d 93 (308)
+|.|++.|| ..+.. . ..|..+++.|.++|+.|+.+-
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g 215 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFG 215 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 478899999 33222 2 246789999999998888753
No 474
>PRK05993 short chain dehydrogenase; Provisional
Probab=28.60 E-value=91 Score=24.42 Aligned_cols=32 Identities=13% Similarity=0.182 Sum_probs=22.8
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++-|..+.-. ..+++.|.++|+.|++.+..
T Consensus 6 ~vlItGasggiG---~~la~~l~~~G~~Vi~~~r~ 37 (277)
T PRK05993 6 SILITGCSSGIG---AYCARALQSDGWRVFATCRK 37 (277)
T ss_pred EEEEeCCCcHHH---HHHHHHHHHCCCEEEEEECC
Confidence 456666544333 56888899999999998754
No 475
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=28.45 E-value=1.1e+02 Score=24.40 Aligned_cols=36 Identities=22% Similarity=0.527 Sum_probs=27.8
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGF 99 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~ 99 (308)
+-+|.|..|.-. ..+++.|.++||.|..+..|..-.
T Consensus 4 ~ALITGITGQDG---sYLa~lLLekGY~VhGi~Rrss~~ 39 (345)
T COG1089 4 VALITGITGQDG---SYLAELLLEKGYEVHGIKRRSSSF 39 (345)
T ss_pred eEEEecccCCch---HHHHHHHHhcCcEEEEEeeccccC
Confidence 567788877655 357899999999999999885433
No 476
>PRK03482 phosphoglycerate mutase; Provisional
Probab=28.43 E-value=2.3e+02 Score=21.24 Aligned_cols=37 Identities=11% Similarity=0.074 Sum_probs=23.9
Q ss_pred CcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhHHHHH
Q 035721 109 DLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGAIALY 148 (308)
Q Consensus 109 ~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~~a~~ 148 (308)
++.++..-+..+++.+.... ...++.+|+|+ +.+...
T Consensus 121 s~~~~~~Rv~~~l~~~~~~~-~~~~vliVsHg--~~i~~l 157 (215)
T PRK03482 121 SMQELSDRMHAALESCLELP-QGSRPLLVSHG--IALGCL 157 (215)
T ss_pred cHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCc--HHHHHH
Confidence 66777777777777765432 34568899994 444443
No 477
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=28.37 E-value=1.2e+02 Score=24.35 Aligned_cols=39 Identities=26% Similarity=0.286 Sum_probs=29.3
Q ss_pred cceEEEEccCCCccchHHHHHHHHHHHcCCeEEEecCCCCcC
Q 035721 58 LGVLCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQGHGF 99 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~ 99 (308)
..-++++-|.|+.-. +.++..|+++|..++.+|.-..|.
T Consensus 37 ~g~~vLITGgg~GlG---r~ialefa~rg~~~vl~Din~~~~ 75 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLG---RLIALEFAKRGAKLVLWDINKQGN 75 (300)
T ss_pred cCCEEEEeCCCchHH---HHHHHHHHHhCCeEEEEeccccch
Confidence 345888888665543 678999999999999999765543
No 478
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=28.34 E-value=1.1e+02 Score=23.78 Aligned_cols=20 Identities=15% Similarity=0.036 Sum_probs=17.1
Q ss_pred EEEEechhhHHHHHHHHhcC
Q 035721 135 FLYSESLGGAIALYITLRQK 154 (308)
Q Consensus 135 ~l~G~S~Gg~~a~~~a~~~p 154 (308)
.+.|-|.|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 39999999999999987654
No 479
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=28.13 E-value=99 Score=23.80 Aligned_cols=32 Identities=28% Similarity=0.235 Sum_probs=23.0
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++-|.++.-. ..+++.|.++|+.|+..+..
T Consensus 17 ~vlItGas~gIG---~~ia~~l~~~G~~v~~~~~~ 48 (258)
T PRK06935 17 VAIVTGGNTGLG---QGYAVALAKAGADIIITTHG 48 (258)
T ss_pred EEEEeCCCchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 556666554433 57889999999999988754
No 480
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=28.06 E-value=1.5e+02 Score=23.68 Aligned_cols=41 Identities=15% Similarity=0.101 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHhcC---CCCCEEEEEechhhHHHHHHHHhcC
Q 035721 114 VEDAISFFDSFRARHA---PDLPAFLYSESLGGAIALYITLRQK 154 (308)
Q Consensus 114 ~~d~~~~l~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p 154 (308)
-..+..-+++.+.... ++.++.++|-|.|=.+|.+.+..+.
T Consensus 21 e~nV~~QI~y~k~~gp~~ngPKkVLviGaSsGyGLa~RIsaaFG 64 (398)
T COG3007 21 EANVLQQIDYVKAAGPIKNGPKKVLVIGASSGYGLAARISAAFG 64 (398)
T ss_pred HHHHHHHHHHHHhcCCccCCCceEEEEecCCcccHHHHHHHHhC
Confidence 3456666777666543 6778999999999999988887765
No 481
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=28.04 E-value=3e+02 Score=21.62 Aligned_cols=60 Identities=7% Similarity=-0.067 Sum_probs=38.0
Q ss_pred cceEEEEccCCCccchH---HHHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHH
Q 035721 58 LGVLCVVHGFTGESSWI---VQLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRA 126 (308)
Q Consensus 58 ~~~vv~~hG~~~~~~~~---~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~ 126 (308)
.+++++.||-....... -..+.+.|.+.|..+-...++|.+- .+..+..-+...+++...
T Consensus 211 ~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H---------~f~~~~~~~~~~~~~~~~ 273 (275)
T TIGR02821 211 HSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDH---------SYYFIASFIADHLRHHAE 273 (275)
T ss_pred CCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCc---------cchhHHHhHHHHHHHHHh
Confidence 57788889965432111 2357788888888887777776442 445555666666665543
No 482
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=28.04 E-value=1e+02 Score=23.70 Aligned_cols=32 Identities=13% Similarity=0.182 Sum_probs=23.3
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++-|..+.-. ..+++.|.++|+.|+..+..
T Consensus 8 ~vlItGas~~iG---~~ia~~l~~~G~~v~~~~r~ 39 (257)
T PRK07067 8 VALLTGAASGIG---EAVAERYLAEGARVVIADIK 39 (257)
T ss_pred EEEEeCCCchHH---HHHHHHHHHcCCEEEEEcCC
Confidence 466667544333 57899999999999998753
No 483
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=27.99 E-value=1.4e+02 Score=21.23 Aligned_cols=38 Identities=24% Similarity=0.295 Sum_probs=24.4
Q ss_pred EEEEccCCCccc-hHHHHHHHHHHHcCCeEEEecCCCCc
Q 035721 61 LCVVHGFTGESS-WIVQLTAVLFAKSGFATCAIDHQGHG 98 (308)
Q Consensus 61 vv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G 98 (308)
|.+..+-||.+. ..-..++..|++.|++|+.+|.=-.+
T Consensus 2 i~v~s~kgG~GKTt~a~~LA~~la~~g~~vllvD~D~q~ 40 (169)
T cd02037 2 IAVMSGKGGVGKSTVAVNLALALAKLGYKVGLLDADIYG 40 (169)
T ss_pred EEEecCCCcCChhHHHHHHHHHHHHcCCcEEEEeCCCCC
Confidence 344444444433 23357888898899999999865443
No 484
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=27.96 E-value=1.1e+02 Score=23.80 Aligned_cols=21 Identities=10% Similarity=0.129 Sum_probs=17.7
Q ss_pred EEEEEechhhHHHHHHHHhcC
Q 035721 134 AFLYSESLGGAIALYITLRQK 154 (308)
Q Consensus 134 ~~l~G~S~Gg~~a~~~a~~~p 154 (308)
-.++|-|.|+.++..++...+
T Consensus 34 ~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 34 RMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CEEEEEcHHHHHHHHHHhCCC
Confidence 369999999999999987654
No 485
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=27.82 E-value=59 Score=22.86 Aligned_cols=21 Identities=24% Similarity=0.279 Sum_probs=13.6
Q ss_pred HHHHHHHHHcCCeEEEecCCC
Q 035721 76 QLTAVLFAKSGFATCAIDHQG 96 (308)
Q Consensus 76 ~~~~~~l~~~g~~v~~~d~~G 96 (308)
+.+.+.|.+.|+.|..+|..-
T Consensus 3 ~~~~~~f~~~g~~v~~l~~~~ 23 (154)
T PF03575_consen 3 EKFRKAFRKLGFEVDQLDLSD 23 (154)
T ss_dssp HHHHHHHHHCT-EEEECCCTS
T ss_pred HHHHHHHHHCCCEEEEEeccC
Confidence 455667777777777777654
No 486
>PRK05693 short chain dehydrogenase; Provisional
Probab=27.79 E-value=1e+02 Score=24.06 Aligned_cols=32 Identities=16% Similarity=0.284 Sum_probs=22.7
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|..+.- -..+++.|.++|+.|++.+..
T Consensus 3 ~vlItGasggi---G~~la~~l~~~G~~V~~~~r~ 34 (274)
T PRK05693 3 VVLITGCSSGI---GRALADAFKAAGYEVWATARK 34 (274)
T ss_pred EEEEecCCChH---HHHHHHHHHHCCCEEEEEeCC
Confidence 45666654432 257888898999999998754
No 487
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=27.78 E-value=1.4e+02 Score=23.23 Aligned_cols=33 Identities=15% Similarity=0.089 Sum_probs=23.7
Q ss_pred eEEEEccCCCccchHHHHHHHHHHHcCCeEEEec
Q 035721 60 VLCVVHGFTGESSWIVQLTAVLFAKSGFATCAID 93 (308)
Q Consensus 60 ~vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d 93 (308)
.|+++-|-|.+...-+ -++++|..+||+|.++-
T Consensus 62 ~V~VlcG~GNNGGDGl-v~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 62 RVLLVCGPGNNGGDGL-VAARHLAHFGYEVTVCY 94 (246)
T ss_pred eEEEEECCCCCchhHH-HHHHHHHHCCCeEEEEE
Confidence 4667777666665232 67899988999988765
No 488
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=27.71 E-value=98 Score=23.94 Aligned_cols=31 Identities=10% Similarity=0.178 Sum_probs=23.1
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDH 94 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 94 (308)
.+++.|..+.-. ..+++.|.++|++|+..+.
T Consensus 8 ~vlVtGas~gIG---~~ia~~l~~~G~~V~~~~r 38 (263)
T PRK06200 8 VALITGGGSGIG---RALVERFLAEGARVAVLER 38 (263)
T ss_pred EEEEeCCCchHH---HHHHHHHHHCCCEEEEEeC
Confidence 567777554333 5788999999999999875
No 489
>COG0218 Predicted GTPase [General function prediction only]
Probab=27.64 E-value=83 Score=23.43 Aligned_cols=26 Identities=12% Similarity=0.157 Sum_probs=19.4
Q ss_pred hhcCCCCcceEEEeeCCCcccChHHH
Q 035721 244 GRFEEVEVPMLICHGGDDVVCDPACV 269 (308)
Q Consensus 244 ~~~~~i~~P~l~i~g~~D~~~~~~~~ 269 (308)
+.+....+|++++.-.-|.+-..+..
T Consensus 129 ~~l~~~~i~~~vv~tK~DKi~~~~~~ 154 (200)
T COG0218 129 EFLLELGIPVIVVLTKADKLKKSERN 154 (200)
T ss_pred HHHHHcCCCeEEEEEccccCChhHHH
Confidence 44556788999999999998754443
No 490
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=27.56 E-value=1.1e+02 Score=23.88 Aligned_cols=21 Identities=19% Similarity=0.137 Sum_probs=17.5
Q ss_pred EEEEEechhhHHHHHHHHhcC
Q 035721 134 AFLYSESLGGAIALYITLRQK 154 (308)
Q Consensus 134 ~~l~G~S~Gg~~a~~~a~~~p 154 (308)
-.+.|-|.|+.++..++...+
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 38 RKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCCC
Confidence 458899999999999887654
No 491
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=27.48 E-value=63 Score=23.26 Aligned_cols=20 Identities=20% Similarity=0.150 Sum_probs=16.3
Q ss_pred CEEEEEechhhHHHHHHHHh
Q 035721 133 PAFLYSESLGGAIALYITLR 152 (308)
Q Consensus 133 ~~~l~G~S~Gg~~a~~~a~~ 152 (308)
.-.+.|-|.||.+|+.++..
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALG 47 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC
T ss_pred ccEEEEcChhhhhHHHHHhC
Confidence 45799999999999887765
No 492
>PRK07074 short chain dehydrogenase; Provisional
Probab=27.47 E-value=1.1e+02 Score=23.56 Aligned_cols=32 Identities=28% Similarity=0.282 Sum_probs=23.5
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|.++.-. ..++..|.++|++|+.++..
T Consensus 4 ~ilItGat~~iG---~~la~~L~~~g~~v~~~~r~ 35 (257)
T PRK07074 4 TALVTGAAGGIG---QALARRFLAAGDRVLALDID 35 (257)
T ss_pred EEEEECCcchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 466777554433 57888899999999999853
No 493
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=27.34 E-value=1.5e+02 Score=21.03 Aligned_cols=54 Identities=17% Similarity=0.097 Sum_probs=33.1
Q ss_pred cCCCcEEEEEEecCCCC-CCCcceEEEEccCCCccch-------------------HHHHHHHHHHHcCCeEEE
Q 035721 38 NSRGLRLFTQWWTPLPP-AKTLGVLCVVHGFTGESSW-------------------IVQLTAVLFAKSGFATCA 91 (308)
Q Consensus 38 ~~~g~~l~~~~~~~~~~-~~~~~~vv~~hG~~~~~~~-------------------~~~~~~~~l~~~g~~v~~ 91 (308)
..+|.+|-|+.|.|.-. .-...-+|+-|+..|+.-. .-..++..|++.||-.++
T Consensus 59 k~~gl~id~y~f~psl~e~I~~AdlVIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~egyL~~C 132 (170)
T KOG3349|consen 59 KNGGLTIDGYDFSPSLTEDIRSADLVISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEEGYLYYC 132 (170)
T ss_pred ccCCeEEEEEecCccHHHHHhhccEEEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhcCcEEEe
Confidence 45677888888877521 0112447777776654210 112578888888887666
No 494
>PRK12939 short chain dehydrogenase; Provisional
Probab=27.33 E-value=1.1e+02 Score=23.28 Aligned_cols=31 Identities=19% Similarity=0.116 Sum_probs=22.5
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDH 94 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 94 (308)
.+++.|..+.-. ..+++.|.++|++|++.+.
T Consensus 9 ~vlItGa~g~iG---~~la~~l~~~G~~v~~~~r 39 (250)
T PRK12939 9 RALVTGAARGLG---AAFAEALAEAGATVAFNDG 39 (250)
T ss_pred EEEEeCCCChHH---HHHHHHHHHcCCEEEEEeC
Confidence 456777554433 5788889999999999864
No 495
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=27.32 E-value=1.1e+02 Score=23.58 Aligned_cols=32 Identities=22% Similarity=0.211 Sum_probs=23.2
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++-|..+.-. ..+++.|.++|++|+..+..
T Consensus 10 ~vlVtGas~gIG---~~la~~l~~~G~~v~~~~r~ 41 (260)
T PRK12823 10 VVVVTGAAQGIG---RGVALRAAAEGARVVLVDRS 41 (260)
T ss_pred EEEEeCCCchHH---HHHHHHHHHCCCEEEEEeCc
Confidence 466666544333 57889999999999998864
No 496
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=27.31 E-value=99 Score=23.78 Aligned_cols=32 Identities=25% Similarity=0.268 Sum_probs=23.5
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|..+.-. ..+++.|.++|++|+..+..
T Consensus 9 ~vlItGasg~iG---~~la~~l~~~G~~v~~~~r~ 40 (262)
T PRK13394 9 TAVVTGAASGIG---KEIALELARAGAAVAIADLN 40 (262)
T ss_pred EEEEECCCChHH---HHHHHHHHHCCCeEEEEeCC
Confidence 566777655433 57889999999999988753
No 497
>PRK08628 short chain dehydrogenase; Provisional
Probab=27.30 E-value=1.1e+02 Score=23.52 Aligned_cols=32 Identities=13% Similarity=0.183 Sum_probs=23.5
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++.|..+.-. ..+++.|.++|+.|+..+.+
T Consensus 9 ~ilItGasggiG---~~la~~l~~~G~~v~~~~r~ 40 (258)
T PRK08628 9 VVIVTGGASGIG---AAISLRLAEEGAIPVIFGRS 40 (258)
T ss_pred EEEEeCCCChHH---HHHHHHHHHcCCcEEEEcCC
Confidence 566777554433 57899999999999988754
No 498
>COG2403 Predicted GTPase [General function prediction only]
Probab=27.28 E-value=1.7e+02 Score=24.46 Aligned_cols=50 Identities=16% Similarity=0.168 Sum_probs=31.2
Q ss_pred EEEEecCCCC--CCCcceEEEEcc--CCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 45 FTQWWTPLPP--AKTLGVLCVVHG--FTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 45 ~~~~~~~~~~--~~~~~~vv~~hG--~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.|..++|.+. ...+| ++-+-| -+......-+.+++.|.++||+|+++-+|
T Consensus 111 ~f~~~gP~et~~~~ekP-viaV~atrtg~GKsaVS~~v~r~l~ergyrv~vVrhP 164 (449)
T COG2403 111 DFKELGPKETMLKLEKP-VIAVTATRTGVGKSAVSRYVARLLRERGYRVCVVRHP 164 (449)
T ss_pred eeEEeCccHHhhhhcCc-eEEEEEeccccchhHHHHHHHHHHHHcCCceEEEecC
Confidence 3557777553 12244 444444 33333334467889999999999999886
No 499
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=27.22 E-value=1.1e+02 Score=23.40 Aligned_cols=32 Identities=16% Similarity=0.272 Sum_probs=22.1
Q ss_pred EEEEccCCCccchHHHHHHHHHHHcCCeEEEecCC
Q 035721 61 LCVVHGFTGESSWIVQLTAVLFAKSGFATCAIDHQ 95 (308)
Q Consensus 61 vv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 95 (308)
.+++-|..+.-. ..+++.|.+.|++|++++..
T Consensus 14 ~vlItG~~g~iG---~~la~~l~~~G~~Vi~~~r~ 45 (247)
T PRK08945 14 IILVTGAGDGIG---REAALTYARHGATVILLGRT 45 (247)
T ss_pred EEEEeCCCchHH---HHHHHHHHHCCCcEEEEeCC
Confidence 455555444333 46788888899999998864
No 500
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=27.13 E-value=2.9e+02 Score=21.20 Aligned_cols=111 Identities=15% Similarity=0.129 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCeEEEecCCCCcCCCCccccCCCcchHHHHHHHHHHHHHHhcCCCCCEEEEEechhhH----HHHHHHH
Q 035721 76 QLTAVLFAKSGFATCAIDHQGHGFSDGLVAHIPDLNPVVEDAISFFDSFRARHAPDLPAFLYSESLGGA----IALYITL 151 (308)
Q Consensus 76 ~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~~l~G~S~Gg~----~a~~~a~ 151 (308)
...++.|.+.+..|+..|+-|-... -...|....-++|....++.+....-.-.+-+.+|-+.|+. -|+.+..
T Consensus 100 E~~~eklk~~~vdvvsLDfvgDn~v---Ik~vy~l~ksv~dyl~~l~~L~e~~irvvpHitiGL~~gki~~e~kaIdiL~ 176 (275)
T COG1856 100 ESDLEKLKEELVDVVSLDFVGDNDV---IKRVYKLPKSVEDYLRSLLLLKENGIRVVPHITIGLDFGKIHGEFKAIDILV 176 (275)
T ss_pred HHHHHHHHHhcCcEEEEeecCChHH---HHHHHcCCccHHHHHHHHHHHHHcCceeceeEEEEeccCcccchHHHHHHHh
Q ss_pred hcCCCccEEEEeCCcCCCCcCCCCCchhhhhHHHhhhh
Q 035721 152 RQKGAWDGLILNGAMCGISQKFKPPWPLEHLLFTVAWL 189 (308)
Q Consensus 152 ~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (308)
.++...--++.+-|.++..-...++.........+...
T Consensus 177 ~~~~DalVl~vliPtpGtkm~~~~pp~~eE~i~v~~~A 214 (275)
T COG1856 177 NYEPDALVLVVLIPTPGTKMGNSPPPPVEEAIKVVKYA 214 (275)
T ss_pred cCCCCeEEEEEEecCCchhccCCCCcCHHHHHHHHHHH
Done!