Your job contains 1 sequence.
>035724
VEQIPLSFQSVNRYFESFVFPLLEETRAQLSSSMEKISEAPFAQVVDLEDSKPYGAMLSD
VKVDYWRNRFSNYSKESYKVLPGDILVLADAKPETASDLRRVGRMWTFVSVTKVTEDKNE
SDTTSTSFKVKASKENQIDGANKSLFAIFLTNVTSNTRIWNSLHMSGNLKIIKELLCTDS
VVKEDCELCPVQSDGIWNDIFGPSLSSTLNDSQAQAVLSCLRRTHCDHKATVELIWGPPG
TGKTKTVSMLLDFCFTKASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLK
LPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISS
FPNSYFYDNKIFDSPNVKEKNYEKRFLPGRMYGPYSFINVLDGREESIAHSYRNMVEVFV
VMKILLNLYKVHNVSNLCSSLMKKCINVKYFFLSMHCLWILGNARTLTRKKSVWEALVHD
ANARQCFFNAEDEEDLGKAILGVKKELDEFDDLLNPGSILFRSQRWKVNFSENFLKSFRK
LTSDQTKKWVTHLLVKLSSGWRPKKRNVEIIKQFKVERFYIICTIDIVKESQYFQVLKVW
DILPLEDVPKLVARLDNILAKYTDEFINHCKEKCIEGNLEVPKTWAATSKVVRFKNLADI
DSDSESDLGGAASDSTSYVENSNVSDSLLLMKFYSLSSGAVSHLLSDRDGGELDLPFEVT
DEQLEMILFPKSSFILGRSGTGKTTILTMKLFQKEKLHHMAMDGFYGVNNSVTLHSSWES
GAEEGLGETERPILRQLFVTVSPKLCFAVKQHISQMISSAFGGKFVAESRLIDIDDAAEF
KDIPNSFADIPAESHPLVITFHKFLMMLDGTLGSSYFERFHDIRKHHGQPETSLIYGEPP
ILLESRNDENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYVGKQALVLTIV
ESKGLEFQVIHYTSQCCNSPFKHALFDSTSPGSFPSFNEAKHNVLCSELKQLYVAITRTR
QRLWIWENMEEFSKPMFDYWKKKSLVQVRQLDDSLAQAMQVASSPEEWKSRGIKLFHEHN
YDMATICFEKAKDSYWEGRSKATGLKATADRCRSSNPKQANVNLREAAKIFEAIGKADSA
AKCFYNLGEYERAGRIYLERREEPELEKAGECFFLAGCYKLAADVYAKGKFFSECLAVCS
KGKLFEIGLQYMNHWKQHADTDVEHAGTDVGLLVRSMEINKIEQEFLEKCAIHYYGLQDK
KSMMKFVKSFRSVDLMRKFLKSLSCFDDLLVLEEESGNFMDAANIARLRGDIFLAVDLLQ
KAGCFKEACNVTLNHVISNSLWSPGSKGWPLKQFTKKKELLEKAKSLAKNESNQFYEFVC
TEADILSNDQSDLSIINQQLNASTRHQSISGETLSVRQILDFHLKTDSSKYVWGDELVLD
LTYSEEIICKNRVSVQSLVYFWDCWKDKIVNVIEYLGCLKSQDFSDHGSYGDFCLHYLGV
WKQHSNLDTVYLLLNSDADWVRGLGNSYALWSWKLPSIDVHQLVSAGKNYWSSELLSVGM
KVLYYLEALNKQSSTNSPSVFSQVLCLNCINEVAKFLLSSKHLNLSHHDAEILQKFVDRS
TEHFFDSIFPLDRRESLKMNMITLKGTEFYRNIIKEVIFKHLKDSPSYGRIGSVMVMILG
SGKLGNDVYERVAKWFDGNSLWKELFESLSWNMGSKSCQGSASCHNFDELKESHIQKFYK
ALVDIYGANWRKVHYITPASFLYLIERLLILLSRLNGYIFTTKSSFVDWFIYQEGSTNPT
CSSSTDVKQSFGGVLEFIGTVVRQFLYNGKEVMEWIGKSHTNITHYHSLVVLRLVVIICL
LHLNFGGDSLNLLLDLLGRSYICNKLPREFYDALRRRRNRSLLDVIAEAFIKIGNPLVLA
SLGDNCPKFAGRDTIFVDM
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035724
(1939 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2018561 - symbol:AT1G65810 species:3702 "Arabi... 546 6.1e-108 4
TAIR|locus:2018536 - symbol:AT1G65780 species:3702 "Arabi... 507 1.1e-106 4
TAIR|locus:2166183 - symbol:AT5G37160 species:3702 "Arabi... 503 7.0e-79 3
TAIR|locus:2166173 - symbol:AT5G37150 species:3702 "Arabi... 503 5.0e-75 3
TAIR|locus:2173033 - symbol:AT5G52090 species:3702 "Arabi... 499 3.3e-74 3
TAIR|locus:2166163 - symbol:AT5G37140 species:3702 "Arabi... 486 3.0e-73 3
TAIR|locus:2152627 - symbol:AT5G37030 species:3702 "Arabi... 438 2.8e-65 4
TAIR|locus:2135472 - symbol:AT4G05540 species:3702 "Arabi... 494 9.7e-47 2
TAIR|locus:2126480 - symbol:AT4G30100 species:3702 "Arabi... 265 1.0e-26 3
UNIPROTKB|F1MVI7 - symbol:TRANK1 "Uncharacterized protein... 193 2.2e-26 3
UNIPROTKB|G3MYJ1 - symbol:TRANK1 "Uncharacterized protein... 193 2.3e-26 3
RGD|1563130 - symbol:Trank1 "tetratricopeptide repeat and... 194 2.8e-24 5
UNIPROTKB|F1NFZ0 - symbol:TRANK1 "Uncharacterized protein... 250 3.5e-24 5
MGI|MGI:1341834 - symbol:Trank1 "tetratricopeptide repeat... 195 8.8e-24 5
UNIPROTKB|B7WP88 - symbol:TRANK1 "TPR and ankyrin repeat-... 195 1.3e-23 5
TAIR|locus:2059088 - symbol:AT2G19120 "AT2G19120" species... 265 8.1e-23 3
TAIR|locus:2130384 - symbol:MAA3 "MAGATAMA 3" species:370... 237 1.5e-22 2
UNIPROTKB|F1PCE7 - symbol:TRANK1 "Uncharacterized protein... 194 2.0e-22 5
UNIPROTKB|F1PD19 - symbol:TRANK1 "Uncharacterized protein... 194 2.0e-22 5
UNIPROTKB|J9NSW6 - symbol:TRANK1 "Uncharacterized protein... 194 2.2e-22 5
UNIPROTKB|O15050 - symbol:TRANK1 "TPR and ankyrin repeat-... 195 4.8e-22 6
DICTYBASE|DDB_G0268660 - symbol:DDB_G0268660 "DNA2/NAM7 h... 283 5.7e-21 4
SGD|S000004422 - symbol:SEN1 "Presumed helicase and subun... 254 3.8e-20 4
DICTYBASE|DDB_G0268924 - symbol:DDB_G0268924 "Helicase SE... 284 5.7e-20 3
CGD|CAL0003335 - symbol:SEN1 species:5476 "Candida albica... 211 1.0e-19 3
DICTYBASE|DDB_G0268662 - symbol:DDB_G0268662 "DNA2/NAM7 h... 283 3.3e-19 6
DICTYBASE|DDB_G0285243 - symbol:DDB_G0285243 "putative sp... 237 1.1e-17 3
DICTYBASE|DDB_G0268914 - symbol:DDB_G0268914 species:4468... 255 1.6e-17 5
ZFIN|ZDB-GENE-070402-1 - symbol:setx "senataxin" species:... 207 1.8e-16 4
MGI|MGI:107995 - symbol:Upf1 "UPF1 regulator of nonsense ... 226 9.3e-16 3
UNIPROTKB|E1C0J4 - symbol:UPF1 "Uncharacterized protein" ... 226 1.8e-15 3
UNIPROTKB|E1BEK9 - symbol:UPF1 "Uncharacterized protein" ... 226 1.9e-15 3
UNIPROTKB|E1C0J3 - symbol:UPF1 "Uncharacterized protein" ... 226 1.9e-15 3
UNIPROTKB|Q92900 - symbol:UPF1 "Regulator of nonsense tra... 226 1.9e-15 3
UNIPROTKB|E2RL81 - symbol:UPF1 "Uncharacterized protein" ... 226 1.9e-15 3
TAIR|locus:2171007 - symbol:LBA1 "LOW-LEVEL BETA-AMYLASE ... 227 3.6e-15 3
ASPGD|ASPL0000056713 - symbol:AN0646 species:162425 "Emer... 208 1.2e-14 3
ZFIN|ZDB-GENE-040426-2836 - symbol:upf1 "upf1 regulator o... 226 1.4e-14 4
DICTYBASE|DDB_G0274399 - symbol:DDB_G0274399 "DNA2/NAM7 h... 195 1.5e-14 4
FB|FBgn0035842 - symbol:CG7504 species:7227 "Drosophila m... 188 3.3e-14 3
UNIPROTKB|I3L717 - symbol:LOC100514320 "Uncharacterized p... 131 4.1e-14 3
CGD|CAL0003666 - symbol:NAM7 species:5476 "Candida albica... 235 5.1e-14 2
UNIPROTKB|Q5A507 - symbol:NAM7 "Putative uncharacterized ... 235 5.1e-14 2
UNIPROTKB|G4NIZ8 - symbol:MGG_02784 "DNA-binding protein ... 209 9.2e-14 4
FB|FBgn0030354 - symbol:Upf1 "Upf1" species:7227 "Drosoph... 214 2.1e-13 3
POMBASE|SPBC29A10.10c - symbol:SPBC29A10.10c "tRNA-splici... 223 2.7e-13 4
UNIPROTKB|E1C4T7 - symbol:Gga.18015 "Uncharacterized prot... 198 5.0e-12 3
GENEDB_PFALCIPARUM|MAL7P1.12 - symbol:MAL7P1.12 "erythroc... 188 9.8e-12 2
UNIPROTKB|Q8IC35 - symbol:MAL7P1.12 "Erythrocyte membrane... 188 9.8e-12 2
POMBASE|SPAC6G9.10c - symbol:sen1 "ATP-dependent 5' to 3'... 224 2.0e-11 5
UNIPROTKB|G4ND47 - symbol:MGG_00976 "Regulator-nonsense t... 214 2.8e-11 2
SGD|S000004685 - symbol:NAM7 "ATP-dependent RNA helicase ... 208 3.2e-11 2
POMBASE|SPAC16C9.06c - symbol:upf1 "ATP-dependent RNA hel... 198 9.9e-11 2
CGD|CAL0001700 - symbol:orf19.702 species:5476 "Candida a... 180 1.1e-10 3
ZFIN|ZDB-GENE-070424-144 - symbol:si:ch211-183d5.1 "si:ch... 173 6.3e-10 3
DICTYBASE|DDB_G0288923 - symbol:upf1 "regulator of nonsen... 206 7.7e-10 3
WB|WBGene00004880 - symbol:smg-2 species:6239 "Caenorhabd... 201 9.6e-10 2
UNIPROTKB|E1BQD2 - symbol:C4H4orf21 "Uncharacterized prot... 203 1.9e-09 3
DICTYBASE|DDB_G0289529 - symbol:DDB_G0289529 species:4468... 212 6.7e-09 3
UNIPROTKB|E1BAS6 - symbol:SETX "Uncharacterized protein" ... 160 8.5e-09 4
UNIPROTKB|F1PHA4 - symbol:SETX "Uncharacterized protein" ... 162 8.6e-09 4
MGI|MGI:2443480 - symbol:Setx "senataxin" species:10090 "... 160 1.0e-08 4
CGD|CAL0006154 - symbol:orf19.6199 species:5476 "Candida ... 136 1.7e-08 3
UNIPROTKB|Q5AAW1 - symbol:HCS1 "Putative uncharacterized ... 136 1.7e-08 3
RGD|1565575 - symbol:Setx "senataxin" species:10116 "Ratt... 160 2.2e-08 2
UNIPROTKB|F1S0U6 - symbol:SETX "Uncharacterized protein" ... 157 2.7e-08 4
UNIPROTKB|Q6ZU11 - symbol:Q6ZU11 "Uncharacterized protein... 179 5.3e-08 2
SGD|S000000978 - symbol:ECM32 "DNA dependent ATPase/DNA h... 194 1.1e-07 3
POMBASE|SPCC737.07c - symbol:SPCC737.07c "DNA polymerase ... 164 1.2e-07 2
TAIR|locus:2056896 - symbol:AT2G03270 species:3702 "Arabi... 171 1.3e-07 2
UNIPROTKB|Q7Z333 - symbol:SETX "Probable helicase senatax... 155 1.3e-07 4
UNIPROTKB|F1PCI1 - symbol:C4orf21 "Uncharacterized protei... 182 1.4e-07 3
UNIPROTKB|D4AEB3 - symbol:Setx "Protein Setx" species:101... 160 1.9e-07 4
UNIPROTKB|E1BG37 - symbol:E1BG37 "Uncharacterized protein... 187 2.4e-07 3
RGD|2322000 - symbol:LOC100363957 "hypothetical protein L... 177 2.7e-07 2
UNIPROTKB|G5EA02 - symbol:C4orf21 "Uncharacterized protei... 179 3.7e-07 2
UNIPROTKB|E2RBM4 - symbol:PRIC285 "Uncharacterized protei... 155 4.0e-06 3
UNIPROTKB|E1C0Z0 - symbol:HELZ2 "Uncharacterized protein"... 147 4.1e-06 4
TAIR|locus:2064158 - symbol:EMB2765 "EMBRYO DEFECTIVE 276... 142 1.3e-05 3
UNIPROTKB|Q9BYK8 - symbol:HELZ2 "Helicase with zinc finge... 161 2.1e-05 4
RGD|1306056 - symbol:Pric285 "peroxisomal proliferator-ac... 148 2.8e-05 2
POMBASE|SPBC16D10.04c - symbol:dna2 "DNA replication endo... 126 3.6e-05 3
UNIPROTKB|J9NRI6 - symbol:DNA2 "Uncharacterized protein" ... 130 4.4e-05 3
DICTYBASE|DDB_G0274797 - symbol:aqr "intron-binding prote... 121 4.5e-05 4
DICTYBASE|DDB_G0271732 - symbol:DDB_G0271732 "AN1-type zi... 134 4.8e-05 3
UNIPROTKB|F1NWZ8 - symbol:DNA2 "DNA replication ATP-depen... 140 5.5e-05 3
ZFIN|ZDB-GENE-070912-617 - symbol:si:dkey-97a13.6 "si:dke... 134 5.8e-05 3
UNIPROTKB|E2R760 - symbol:IGHMBP2 "Uncharacterized protei... 136 0.00012 1
UNIPROTKB|E2R8W1 - symbol:IGHMBP2 "Uncharacterized protei... 136 0.00012 1
UNIPROTKB|Q5ZKG3 - symbol:DNA2 "DNA replication ATP-depen... 140 0.00019 5
UNIPROTKB|F1PYQ4 - symbol:DNA2 "Uncharacterized protein" ... 130 0.00022 3
UNIPROTKB|F6UZP1 - symbol:DNA2 "Uncharacterized protein" ... 130 0.00024 3
UNIPROTKB|E2QSH2 - symbol:E2QSH2 "Uncharacterized protein... 130 0.00025 3
TAIR|locus:2162858 - symbol:AT5G35970 species:3702 "Arabi... 132 0.00030 1
UNIPROTKB|I3LBB7 - symbol:I3LBB7 "Uncharacterized protein... 122 0.00037 1
FB|FBgn0051368 - symbol:CG31368 species:7227 "Drosophila ... 133 0.00039 1
ZFIN|ZDB-GENE-040426-2419 - symbol:helz "helicase with zi... 131 0.00052 3
UNIPROTKB|E1BZJ8 - symbol:MOV10L1 "Uncharacterized protei... 89 0.00062 4
UNIPROTKB|Q8QHA5 - symbol:dna2 "DNA replication ATP-depen... 133 0.00078 4
UNIPROTKB|E1BY42 - symbol:E1BY42 "Uncharacterized protein... 144 0.00089 3
WARNING: Descriptions of 1 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2018561 [details] [associations]
symbol:AT1G65810 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0048451 "petal formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
EMBL:CP002684 GO:GO:0004386 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI01019905 RefSeq:NP_176757.1
UniGene:At.52388 ProteinModelPortal:F4IBK8 SMR:F4IBK8 PRIDE:F4IBK8
EnsemblPlants:AT1G65810.1 GeneID:842892 KEGG:ath:AT1G65810
OMA:DSEINKR ArrayExpress:F4IBK8 Uniprot:F4IBK8
Length = 1050
Score = 546 (197.3 bits), Expect = 6.1e-108, Sum P(4) = 6.1e-108
Identities = 114/183 (62%), Positives = 140/183 (76%)
Query: 250 LLDFCFTKASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAIL 309
L C A L+FCTASSS +LH + QL LVIDEAAQLKE ESAIPL+L G+QHAIL
Sbjct: 526 LQKLCLDNAYLLFCTASSSARLHMSSPIQL--LVIDEAAQLKECESAIPLQLRGLQHAIL 583
Query: 310 IGDECQLPAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDN 369
IGDE QLPAM++S+++ EA LGRSLFERL LG K LL++QYRMHPSIS FPN FYD
Sbjct: 584 IGDEKQLPAMIKSNIASEADLGRSLFERLVLLGHNKQLLNMQYRMHPSISIFPNREFYDM 643
Query: 370 KIFDSPNVKEKNYEKRFLPGRMYGPYSFINVLDGREE-SIAHSYRNMVEVFVVMKILLNL 428
KI D+P+V+ ++YEK+FLP +MYGPYSFIN+ GRE+ +S +N+VEV VV +I+ L
Sbjct: 644 KILDAPSVRLRSYEKKFLPEKMYGPYSFINIAYGREQFGEGYSSKNLVEVSVVAEIVSKL 703
Query: 429 YKV 431
Y V
Sbjct: 704 YSV 706
Score = 344 (126.2 bits), Expect = 6.1e-108, Sum P(4) = 6.1e-108
Identities = 80/213 (37%), Positives = 115/213 (53%)
Query: 456 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNAEDEEDLGKAILGVKKELDEFDDLLN 515
+CLWILGN TLT +SVW LV DA AR CF NAE++E L + I LD+ + L N
Sbjct: 792 YCLWILGNEATLTNNRSVWRQLVDDAKARNCFHNAEEDESLAQCIERSTTALDDLNKLQN 851
Query: 516 PGSILFRSQRWKVNFSENFLKSFRKLTSDQTKKWVTHLLVKLSSGWRPKKRNVE-----I 570
I F + WKV S FLKS + + K V L KLS+G + + VE +
Sbjct: 852 KKLISFENSIWKVWLSYEFLKSLETIVDSEINKRVMSFLEKLSNG-KELHQEVEFESENL 910
Query: 571 IKQFKVER-FYIICTIDIVKES-QYFQVLKVWDILPLEDVPKLVARLDNILAKYTDEFIN 628
++Q + + +I IDI K + Q+ QVLK+W +LP DV ++ L+ +YT I+
Sbjct: 911 LRQHEFDDGLSLIWAIDIFKNNNQHVQVLKIWQVLPSTDVSRVTEHLEKHYRRYTKGKIS 970
Query: 629 HCKEKCIEGNLEVPKTWAATSKVVRFKNL-ADI 660
C+ C +G+L VP W S K++ +D+
Sbjct: 971 RCRYICSQGDLVVPMQWPVDSNSCSKKDIVSDV 1003
Score = 334 (122.6 bits), Expect = 6.1e-108, Sum P(4) = 6.1e-108
Identities = 94/285 (32%), Positives = 139/285 (48%)
Query: 1 VEQIPLSFQSVNRYFESFVFPLLEETRAQLSSSMEKISEAP---FAQVVDLEDSKPYGAM 57
V +IP +F S YFESFV P++EET A L SSM I A F ++ +D KP +
Sbjct: 44 VGKIPNTFTSTKEYFESFVKPIIEETHADLLSSMGTIRRAQAFKFWEIKPGKDFKPPRDL 103
Query: 58 LSDVKVDYWRNRFSNYSKESYKVLPGDILVLADAKPETASDLRRVGRMWTFVSVTKVTED 117
+V + + + +V D++ + D +P DLR + V V E+
Sbjct: 104 YYEVTLQMTNEYMTKGGQNLLEV--NDLIAVTDKRPIRIDDLRFSHEPYLLALVCGVNEN 161
Query: 118 KNESDTTSTSFKVKASKENQID-------GANKSL--FAIFLTNVTSNTRIWNSLHMS-- 166
T S + ++ I G KSL F + L N+ +N RIW +LH +
Sbjct: 162 NPHLITILASKPIIFDDDDDIKTSSKRGKGERKSLSFFGVNLINMMTNIRIWTALHPNPE 221
Query: 167 -GNLKIIKELLCTDSVVKE-DCELCPVQSDGIWNDIFGPSLSS-TLNDSQAQAVLSCLRR 223
GNLK+I +L +++ V C C S+ + +D L S LN SQ A+L CL
Sbjct: 222 GGNLKLISRVLQSNNEVDGGSCVSCKENSESVVSDYSARMLRSFKLNSSQEDAILRCLEA 281
Query: 224 THCDHKATVELIWGPPGTGKTKTVS-MLLDFCFTKASLIFCTASS 267
C+H ++LIWGPPGTGKTKT S +LL+F + + C ++
Sbjct: 282 KSCNHSNNIKLIWGPPGTGKTKTTSVLLLNFLKMRCRTLTCAPTN 326
Score = 51 (23.0 bits), Expect = 2.5e-78, Sum P(4) = 2.5e-78
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 1007 SELKQLYVAITRTRQRLWIWENMEEFS------KPMFDYWKKKSLVQVRQLDDSLAQAMQ 1060
S ++ VA+TR R LWI N + + + D K ++ + D+SLAQ ++
Sbjct: 778 SNQQRTNVALTRARYCLWILGNEATLTNNRSVWRQLVDDAKARNCFHNAEEDESLAQCIE 837
Score = 49 (22.3 bits), Expect = 2.5e-78, Sum P(4) = 2.5e-78
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 1186 YAKGKFFSECLAVCSKGKL 1204
Y KGK S C +CS+G L
Sbjct: 964 YTKGKI-SRCRYICSQGDL 981
Score = 46 (21.3 bits), Expect = 5.1e-78, Sum P(4) = 5.1e-78
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 1257 LQDKKSMMKFVKSFRSVDLMRKFLKSLSCFDD 1288
LQ+KK ++ F S V L +FLKSL D
Sbjct: 849 LQNKK-LISFENSIWKVWLSYEFLKSLETIVD 879
Score = 40 (19.1 bits), Expect = 6.0e-23, Sum P(3) = 6.0e-23
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 730 PKSSFILGRSGTGKTTILTMKLFQKEKLHHMAMD 763
PK F +S TT+L+ K F +E+L + D
Sbjct: 407 PKHEFRQFKSVN--TTLLSFKDFVEERLSRLRYD 438
Score = 39 (18.8 bits), Expect = 6.1e-108, Sum P(4) = 6.1e-108
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 939 DDCVRKEISNYVGKQALVLTIVESK 963
+ C +K+I + V + +L++VE +
Sbjct: 992 NSCSKKDIVSDVSRSFALLSVVEEE 1016
Score = 37 (18.1 bits), Expect = 4.5e-77, Sum P(4) = 4.5e-77
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 1238 EINKIEQEFLEKCAIHYYGLQDKKSMMKFVKSFRSVDLMRK 1278
EINK FLEK L + K + + V+ F S +L+R+
Sbjct: 881 EINKRVMSFLEK-------LSNGKELHQEVE-FESENLLRQ 913
>TAIR|locus:2018536 [details] [associations]
symbol:AT1G65780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684 GO:GO:0004386
KO:K10706 InterPro:IPR026852 PANTHER:PTHR10887:SF27 IPI:IPI00534309
RefSeq:NP_176754.1 UniGene:At.52386 ProteinModelPortal:F4IBK4
SMR:F4IBK4 PRIDE:F4IBK4 EnsemblPlants:AT1G65780.1 GeneID:842889
KEGG:ath:AT1G65780 Uniprot:F4IBK4
Length = 1065
Score = 507 (183.5 bits), Expect = 1.1e-106, Sum P(4) = 1.1e-106
Identities = 106/186 (56%), Positives = 134/186 (72%)
Query: 249 MLLDFCFTKASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAI 308
++ + C A L+F TAS S +L+ QL LVIDEAAQLKE ES+IP++LPG++H I
Sbjct: 536 LIKELCLGHACLLFSTASCSARLYTGTPIQL--LVIDEAAQLKECESSIPMQLPGLRHLI 593
Query: 309 LIGDECQLPAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYD 368
L+GDE QLPAMVES ++ EA GRSLFERL+ LG K++L+IQYRMH SISSFPN Y
Sbjct: 594 LVGDERQLPAMVESQIALEAGFGRSLFERLALLGHKKYMLNIQYRMHCSISSFPNKELYG 653
Query: 369 NKIFDSPNVKEKNYEKRFLPGRMYGPYSFINVLDGREE---SIAHSYRNMVEVFVVMKIL 425
KI D+P V+++NY K++LPG MYGPYSFIN+ GREE S +N VEV VV I+
Sbjct: 654 KKILDAPTVRQRNYTKQYLPGEMYGPYSFINIAYGREEYGEGEGRSLKNNVEVVVVAAII 713
Query: 426 LNLYKV 431
NL +V
Sbjct: 714 ANLLQV 719
Score = 368 (134.6 bits), Expect = 1.1e-106, Sum P(4) = 1.1e-106
Identities = 102/290 (35%), Positives = 149/290 (51%)
Query: 1 VEQIPLSFQSVNRYFESFVFPLLEETRAQLSSSMEKISEAPFAQVVDLEDSKPYGAMLSD 60
VE+IP+ F+S YF++F+ PL+EET A L SSM K+ +AP ++ + + Y + +D
Sbjct: 33 VEKIPMEFESTGDYFKTFIPPLIEETHAALLSSMRKLWQAPVVEISYIMQTAEY-KLPND 91
Query: 61 VKVDYWRNRFSNYSKE-SYKVLPGDILVLADAKPETASDLRRVGRMWTFVSVTKVTEDKN 119
+ +++ R S S E S K++P D++ L D +P + V KV D+
Sbjct: 92 L---FYKVRLSGISNEASTKLMPRDLISLTDQRPNHVDGFNISSEPYIVALVCKVDPDR- 147
Query: 120 ESDTTSTSFKVKASKENQIDGANKS--LFAIFLTNVTSNTRIWNSLHMSG---NLKIIKE 174
+D T + K ++ + K LF I L N+T+N RIWN+LH NL +I
Sbjct: 148 PNDVTILASKPLFVEDGRRKKNEKKERLFGIHLVNLTTNIRIWNALHPGDEGVNLNLISR 207
Query: 175 LLCTDSVVKEDCELCPVQ-SDGIWNDIFGPSLSSTLNDSQAQAVLSCLRRTHCDHKATVE 233
+L +S + C C + SDG+ P LN SQ A+L+CL C H TV
Sbjct: 208 VLRRNSEDEGFCIQCLQEGSDGL-----APRRFLKLNPSQEDAILNCLDVRRCYHANTVR 262
Query: 234 LIWGPPGTGKTKTVSMLLDFCFTKASLIFCTAS-SSYKLHRVAMEQLKFL 282
LIWGPPGTGKTKT S+LL F A T ++ + VA LK +
Sbjct: 263 LIWGPPGTGKTKTTSVLL-FTLLNAKCRTLTCGPTNVSVLEVASRVLKLV 311
Score = 327 (120.2 bits), Expect = 1.1e-106, Sum P(4) = 1.1e-106
Identities = 75/203 (36%), Positives = 111/203 (54%)
Query: 457 CLWILGNARTLTRKKSVWEALVHDANARQCFFNAEDEEDLGKAILGVKKELDEFDDLLNP 516
CLWILGN TL KSVW L+ DA R CF +A ++E L +AI E F L N
Sbjct: 808 CLWILGNEATLMNSKSVWRNLIQDAKERGCFHSAGEDESLAQAIASTNIE---FRPLNN- 863
Query: 517 GSILFRSQRWKVNFSENFLKSFRKLTSDQTKKWVTHLLVKLSSGW----RPKKRNV---- 568
+WK+ FS+ F K ++ + +T + + + L +LS GW ++ N+
Sbjct: 864 -------SKWKLCFSDEFKKYVGEIKNPETYRKIKNFLERLSQGWLKEEETERENLVSSS 916
Query: 569 EIIKQFKVERFY-IICTIDIVKES-QYFQVLKVWDILPLEDVPKLVARLDNILAKYTDEF 626
+++KQ K++ II +DI+KE Y QVLK+WD++P D P+ + RLD YT +
Sbjct: 917 QLLKQSKIDDVLRIIWAVDILKEDFHYDQVLKIWDVVPSSDAPEALKRLDLNHTNYTKDE 976
Query: 627 INHCKEKCIEGNLEVPKTWAATS 649
I CK +CI G++ VP W+ S
Sbjct: 977 IEKCKARCIRGDIVVPMRWSIES 999
Score = 53 (23.7 bits), Expect = 1.1e-106, Sum P(4) = 1.1e-106
Identities = 19/63 (30%), Positives = 36/63 (57%)
Query: 1256 GLQDKKSMM---KFVKSFRSVDLMRKFLKSLSCFDDL--LVLEEESGNFMDAANIARLRG 1310
G+ +K S++ +K+F S++L+ + L S+ D + L +E+E +F + RL G
Sbjct: 1002 GIPEKSSVVCSSDVIKTFGSLNLVGEMLSSVPSNDSVEPLEVEKEEQDF----EVDRL-G 1056
Query: 1311 DIF 1313
D+F
Sbjct: 1057 DLF 1059
Score = 47 (21.6 bits), Expect = 3.0e-28, Sum P(4) = 3.0e-28
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 830 RLIDIDDAAEFKDIPNSFA-DIPAESHPLVITFHKFL-------MMLDGTLGSSYFER 879
+L+ ID+AA+ K+ +S +P H +++ + L + L+ G S FER
Sbjct: 565 QLLVIDEAAQLKECESSIPMQLPGLRHLILVGDERQLPAMVESQIALEAGFGRSLFER 622
Score = 42 (19.8 bits), Expect = 7.3e-77, Sum P(4) = 7.3e-77
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 1014 VAITRTRQRLWIWEN----MEEFS--KPMFDYWKKKSLVQVRQLDDSLAQAMQVASSPEE 1067
V +TR R LWI N M S + + K++ D+SLAQA +AS+ E
Sbjct: 800 VLLTRARFCLWILGNEATLMNSKSVWRNLIQDAKERGCFHSAGEDESLAQA--IASTNIE 857
Query: 1068 WK 1069
++
Sbjct: 858 FR 859
Score = 41 (19.5 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 333 SLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFY 367
+L + L QA ++ I Y M + PN FY
Sbjct: 61 ALLSSMRKLWQAP-VVEISYIMQTAEYKLPNDLFY 94
>TAIR|locus:2166183 [details] [associations]
symbol:AT5G37160 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00521499 RefSeq:NP_198532.1 UniGene:At.55177
ProteinModelPortal:F4K5W6 SMR:F4K5W6 PRIDE:F4K5W6
EnsemblPlants:AT5G37160.1 GeneID:833689 KEGG:ath:AT5G37160
OMA:WAELISE Uniprot:F4K5W6
Length = 871
Score = 503 (182.1 bits), Expect = 7.0e-79, Sum P(3) = 7.0e-79
Identities = 102/180 (56%), Positives = 127/180 (70%)
Query: 253 FCFTKASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGD 312
FC A +IFCTASS ++ + + LV+DE AQLKE ES L+LPG+ HA+LIGD
Sbjct: 534 FCLQNADIIFCTASSVANINPARIGSVDLLVVDETAQLKECESVAALQLPGLCHALLIGD 593
Query: 313 ECQLPAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIF 372
E QLPAMV + +A GRSLFERL +G +KHLL++QYRMHPSIS FPN FY +I
Sbjct: 594 EYQLPAMVHNEECDKAKFGRSLFERLVLIGHSKHLLNVQYRMHPSISRFPNKEFYGGRIT 653
Query: 373 DSPNVKEKNYEKRFLPGRMYGPYSFINVLDGREE-SIAHSYRNMVEVFVVMKILLNLYKV 431
D+ NV+E YEKRFL G M+G +SFINV G+EE HS +NMVEV V+ KI+ NL+KV
Sbjct: 654 DAANVQESIYEKRFLQGNMFGTFSFINVGRGKEEFGDGHSPKNMVEVAVISKIISNLFKV 713
Score = 311 (114.5 bits), Expect = 7.0e-79, Sum P(3) = 7.0e-79
Identities = 89/273 (32%), Positives = 141/273 (51%)
Query: 4 IPLSFQSVNRYFESFVFPLLEETRAQLSSSMEKISEAPFAQVVDLEDSKPYGAMLSDVKV 63
IP F SV+ Y + FV LLEETR +L SS +S++P ++++ +E + S +K
Sbjct: 43 IPDRFSSVDEYSQCFVPHLLEETRTELFSSFRSLSKSPVSRILSVETKVIEYSGRSSIKW 102
Query: 64 --DYWRNRFSNYSKESYKVLPGDILVLADAKPETASDLR-RVGRMWTFVSVTKVTEDKNE 120
D +++ E Y+ GDI+ L+ P + ++ R R+ + + + V +
Sbjct: 103 FHDIKLMDYADDKNEIYEPKCGDIIALS---PLSLTEERPRIDDLDPLL-LGYVFSVYGD 158
Query: 121 SDTTSTSFKVKASKENQIDGANKSLFA--IFLTNVTSNTRIWNSLHM-SGNLKIIKELLC 177
S K+ I + K F +FL N+T+NTRIWN+LH + + +I+ +L
Sbjct: 159 S-------KISVHFSRSISQSEKHTFCTGVFLINITTNTRIWNALHKDAADSTLIQSVLQ 211
Query: 178 TDSVVKEDCELCPVQSDGIWND-IFGPSLSSTLNDSQAQAVLSCLRRTHCDHKATVELIW 236
D+ E C C DG +D + S+ LN SQ A+L L+ +C HK +V+LIW
Sbjct: 212 EDASATEQCFSCENDVDGSDSDRVVDIIRSAKLNSSQEAAILGFLKTRNCKHKESVKLIW 271
Query: 237 GPPGTGKTKTVSMLLDFCFT-KASLIFCTASSS 268
GPPGTGKTKTV+ LL K + C +++
Sbjct: 272 GPPGTGKTKTVATLLSTLMQLKCKTVVCAPTNT 304
Score = 119 (46.9 bits), Expect = 7.0e-79, Sum P(3) = 7.0e-79
Identities = 24/70 (34%), Positives = 39/70 (55%)
Query: 456 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNAEDEEDLGKAILGVKKELDEFDDLLN 515
HCLW++GN TL S+W L+ ++ R CF++A D+++L A+ LD+
Sbjct: 802 HCLWVIGNGTTLALSGSIWAELISESRTRGCFYDAVDDKNLRDAMSDAL--LDDVSSSF- 858
Query: 516 PGSILFRSQR 525
GS+ R+ R
Sbjct: 859 -GSLSIRNGR 867
Score = 43 (20.2 bits), Expect = 6.5e-71, Sum P(3) = 6.5e-71
Identities = 17/94 (18%), Positives = 40/94 (42%)
Query: 757 LHHMAMDGFYGVNNSVTLHSSWESGAEEGLGETERPILRQLFVTVSPKLCFAVKQHISQM 816
L+ ++DGF G V + S+ +G + +T + + + +
Sbjct: 755 LNVQSVDGFQGGEVDVIIISTVRCNVNGNVGFLSNRQRANVALTRARHCLWVIGNGTTLA 814
Query: 817 ISSAFGGKFVAESRLID-IDDAAEFKDIPNSFAD 849
+S + + ++ESR DA + K++ ++ +D
Sbjct: 815 LSGSIWAELISESRTRGCFYDAVDDKNLRDAMSD 848
Score = 43 (20.2 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 1447 IICKNRVSVQSLVYFWDC-WKDKIVNVIEYL 1476
+ +RVS ++ C WK ++ ++I++L
Sbjct: 379 VFFNDRVSKLGRLFLSTCGWKKRLESIIDFL 409
Score = 42 (19.8 bits), Expect = 8.3e-71, Sum P(3) = 8.3e-71
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 1007 SELKQLYVAITRTRQRLWIWEN 1028
S ++ VA+TR R LW+ N
Sbjct: 788 SNRQRANVALTRARHCLWVIGN 809
Score = 37 (18.1 bits), Expect = 5.1e-21, Sum P(3) = 5.1e-21
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 710 GGELDLPFEVTDEQLEMILFPKSSF 734
G E LP V +E+ + F +S F
Sbjct: 592 GDEYQLPAMVHNEECDKAKFGRSLF 616
>TAIR|locus:2166173 [details] [associations]
symbol:AT5G37150 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004386
KO:K10706 IPI:IPI01020555 RefSeq:NP_198531.2 UniGene:At.55176
ProteinModelPortal:F4K5W5 SMR:F4K5W5 PRIDE:F4K5W5
EnsemblPlants:AT5G37150.1 GeneID:833688 KEGG:ath:AT5G37150
OMA:RSVDEYY Uniprot:F4K5W5
Length = 839
Score = 503 (182.1 bits), Expect = 5.0e-75, Sum P(3) = 5.0e-75
Identities = 107/197 (54%), Positives = 133/197 (67%)
Query: 253 FCFTKASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGD 312
FC A +I CTAS + +++ ++ LV+DEAAQLKE ES L+LPG++HAILIGD
Sbjct: 501 FCLQNADIILCTASGAAEMNVERTGNVELLVVDEAAQLKECESVAALQLPGLRHAILIGD 560
Query: 313 ECQLPAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIF 372
E QLPAMV + + +A GRSLFERL LG KHLL +QYRMHPSIS FPN FY +I
Sbjct: 561 EFQLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHLLDVQYRMHPSISRFPNKEFYGGRIK 620
Query: 373 DSPNVKEKNYEKRFLPGRMYGPYSFINVLDGREE-SIAHSYRNMVEVFVVMKILLNLYKV 431
D+ NVKE Y+KRFL G M+G +SFINV G+EE HS +NMVEV VV +I+ NL+KV
Sbjct: 621 DAENVKESIYQKRFLQGNMFGSFSFINVGRGKEEFGDGHSPKNMVEVAVVSEIISNLFKV 680
Query: 432 HNVSNLCSSLMKKCINV 448
C MK + V
Sbjct: 681 S-----CERRMKVSVGV 692
Score = 271 (100.5 bits), Expect = 5.0e-75, Sum P(3) = 5.0e-75
Identities = 80/267 (29%), Positives = 124/267 (46%)
Query: 4 IPLSFQSVNRYFESFVFPLLEETRAQLSSSMEKISEAPFAQVVDLEDSKPYGAMLSDVKV 63
+P F+SV+ Y++ FV LL E +L SS++ +S++PF Q+ +E + S K+
Sbjct: 32 VPDKFRSVDEYYQCFVPHLLIEAHTELFSSLKSVSKSPFVQIRSMETKTKQSSGSSSNKL 91
Query: 64 DYWRNRFSNYSKESYKVLPGDILVLADAKPETASDLRRVGRMWTFVSVTKVTEDKNESDT 123
Y + S S K P D T RR+ + + + D +
Sbjct: 92 FYDITLKATESL-SAKYQPK----CGDLIALTMDKPRRINDLNPLLLAYVFSSDGD---- 142
Query: 124 TSTSFKVKASKENQIDGANKSLFAIFLTNVTSNTRIWNSLHMSGNLKIIKELLCTDSVVK 183
K+ I F +FL +T+NTRIWN+LH + + + + + V
Sbjct: 143 ----LKISVHLSRSISPLENYSFGVFLMTLTTNTRIWNALHNEAAISTLTKSVLQANTVN 198
Query: 184 EDCELCPVQSDGIWNDIFGPSLSSTLNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGK 243
L + ++ DI S+ LN SQ A+L CL +C HK +V+LIWGPPGTGK
Sbjct: 199 NVFVLKMMGDLTLFLDIIR---STKLNSSQEDAILGCLETRNCTHKNSVKLIWGPPGTGK 255
Query: 244 TKTVSMLLDFCFTK--ASLIFCTASSS 268
TKTV+ LL F K + C +++
Sbjct: 256 TKTVATLL-FALLKLRCKTVVCAPTNT 281
Score = 120 (47.3 bits), Expect = 5.0e-75, Sum P(3) = 5.0e-75
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 456 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNAEDEEDLGKAI 500
HCLW++GN TL S+W L+ ++ R CF++A DE +L A+
Sbjct: 768 HCLWVIGNETTLALSGSIWATLISESRTRGCFYDATDEMNLRNAM 812
Score = 47 (21.6 bits), Expect = 5.1e-17, Sum P(4) = 5.1e-17
Identities = 22/82 (26%), Positives = 36/82 (43%)
Query: 909 ENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYVGKQALVLTIVESKGLEFQ 968
+NA I + SG A N+ G ++++V + KE + Q L G EFQ
Sbjct: 504 QNADIILCTASGAAEMNVERTGNVELLVVDEAAQLKECESVAALQLPGLRHAILIGDEFQ 563
Query: 969 V---IHYTSQCCNSPFKHALFD 987
+ +H C + F +LF+
Sbjct: 564 LPAMVH-NEMCEKAKFGRSLFE 584
Score = 43 (20.2 bits), Expect = 5.8e-67, Sum P(3) = 5.8e-67
Identities = 14/78 (17%), Positives = 33/78 (42%)
Query: 753 QKEKLHHMAMDGFYGVNNSVTLHSSWESGAEEGLGETERPILRQLFVTVSPKLCFAVKQH 812
Q+ L+ ++DGF G + + S+ S + +G + +T + + +
Sbjct: 717 QQFALNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLNNRQRANVALTRARHCLWVIGNE 776
Query: 813 ISQMISSAFGGKFVAESR 830
+ +S + ++ESR
Sbjct: 777 TTLALSGSIWATLISESR 794
Score = 41 (19.5 bits), Expect = 2.9e-66, Sum P(4) = 2.9e-66
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 1014 VAITRTRQRLWIWEN 1028
VA+TR R LW+ N
Sbjct: 761 VALTRARHCLWVIGN 775
Score = 39 (18.8 bits), Expect = 2.9e-66, Sum P(4) = 2.9e-66
Identities = 11/55 (20%), Positives = 24/55 (43%)
Query: 1672 GSVMVMILGSGKLGNDVYERVAKWFDGNSLWKELFESLSWNMGSKSCQGSASCHN 1726
GS+ ++ + Y+ + N++ + L E +S ++GS S + N
Sbjct: 783 GSIWATLISESRTRGCFYDATDEMNLRNAMNEALLEDVSSSLGSLSIRNGHGRRN 837
Score = 39 (18.8 bits), Expect = 3.3e-16, Sum P(4) = 3.3e-16
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 710 GGELDLPFEVTDEQLEMILFPKSSF 734
G E LP V +E E F +S F
Sbjct: 559 GDEFQLPAMVHNEMCEKAKFGRSLF 583
>TAIR|locus:2173033 [details] [associations]
symbol:AT5G52090 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0004519 eggNOG:COG1112
EMBL:AB015478 KO:K10706 IPI:IPI00525648 RefSeq:NP_200022.1
UniGene:At.65668 ProteinModelPortal:Q9FJ83 SMR:Q9FJ83 PRIDE:Q9FJ83
EnsemblPlants:AT5G52090.1 GeneID:835285 KEGG:ath:AT5G52090
TAIR:At5g52090 HOGENOM:HOG000083772 InParanoid:Q9FJ83 OMA:TACEASE
PhylomeDB:Q9FJ83 ProtClustDB:CLSN2686886 Genevestigator:Q9FJ83
Uniprot:Q9FJ83
Length = 676
Score = 499 (180.7 bits), Expect = 3.3e-74, Sum P(3) = 3.3e-74
Identities = 106/197 (53%), Positives = 132/197 (67%)
Query: 253 FCFTKASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGD 312
FC A +I CTAS + +++ ++ LV+DEAAQLKE ES L+LPG++HAILIGD
Sbjct: 338 FCLQNADIILCTASGAAEMNVERTGNVELLVVDEAAQLKECESVAALQLPGLRHAILIGD 397
Query: 313 ECQLPAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIF 372
E QLPAMV + + +A GRSLFERL LG KHLL +QYRMHPSIS FPN FY +I
Sbjct: 398 EFQLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHLLDVQYRMHPSISRFPNKEFYGGRIK 457
Query: 373 DSPNVKEKNYEKRFLPGRMYGPYSFINVLDGREE-SIAHSYRNMVEVFVVMKILLNLYKV 431
D+ NVKE Y+KRFL G M+ +SFINV G+EE HS +NMVEV V+ +I+ NLYKV
Sbjct: 458 DAENVKESIYQKRFLKGNMFDSFSFINVGRGKEEFGDGHSPKNMVEVAVISEIISNLYKV 517
Query: 432 HNVSNLCSSLMKKCINV 448
C MK + V
Sbjct: 518 S-----CERRMKVSVGV 529
Score = 210 (79.0 bits), Expect = 3.3e-74, Sum P(3) = 3.3e-74
Identities = 47/119 (39%), Positives = 70/119 (58%)
Query: 153 VTSNTRIWNSLHMSGNLKII-KELLCTDSVVKEDCELCPVQSDGIWNDIFGPSLSSTLND 211
+T+NTRIWN+LH ++ + K +L ++ E C C ++DG + + S+ LN
Sbjct: 3 LTTNTRIWNALHNEADISTLTKSVLQANTEGTEQC-FCS-ENDGRSDLVLDIIRSTKLNS 60
Query: 212 SQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLLDFCFTK--ASLIFCTASSS 268
SQ A+L CL +C HK +V+LIWGPP TGKTKTV+ LL F K + C +++
Sbjct: 61 SQEDAILGCLETRNCTHKNSVKLIWGPPRTGKTKTVATLL-FALLKLRCKTVVCAPTNT 118
Score = 115 (45.5 bits), Expect = 3.3e-74, Sum P(3) = 3.3e-74
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 456 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNAEDEEDLGKAI 500
HCLW++GN TL S+W L+ ++ R CF +A DE +L A+
Sbjct: 605 HCLWVIGNETTLALSGSIWATLISESRTRGCFHDATDEMNLRDAM 649
Score = 47 (21.6 bits), Expect = 1.6e-11, Sum P(4) = 1.6e-11
Identities = 22/82 (26%), Positives = 36/82 (43%)
Query: 909 ENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYVGKQALVLTIVESKGLEFQ 968
+NA I + SG A N+ G ++++V + KE + Q L G EFQ
Sbjct: 341 QNADIILCTASGAAEMNVERTGNVELLVVDEAAQLKECESVAALQLPGLRHAILIGDEFQ 400
Query: 969 V---IHYTSQCCNSPFKHALFD 987
+ +H C + F +LF+
Sbjct: 401 LPAMVH-NEMCEKAKFGRSLFE 421
Score = 43 (20.2 bits), Expect = 1.2e-66, Sum P(3) = 1.2e-66
Identities = 18/97 (18%), Positives = 37/97 (38%)
Query: 753 QKEKLHHMAMDGFYGVNNSVTLHSSWESGAEEGLGETERPILRQLFVTVSPKLCFAVKQH 812
Q+ L+ ++DGF G + + S+ S +G + +T + + +
Sbjct: 554 QQFTLNVRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVIGNE 613
Query: 813 ISQMISSAFGGKFVAESR----LIDIDDAAEFKDIPN 845
+ +S + ++ESR D D +D N
Sbjct: 614 TTLALSGSIWATLISESRTRGCFHDATDEMNLRDAMN 650
Score = 43 (20.2 bits), Expect = 1.6e-11, Sum P(4) = 1.6e-11
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 583 CTIDIVKESQYFQVLKVWDILPLEDVPKLVA 613
C +D+ Y + KV+ LP EDV K++A
Sbjct: 252 CIVDL-----YTHLPKVY--LPYEDVKKMIA 275
Score = 41 (19.5 bits), Expect = 1.9e-66, Sum P(3) = 1.9e-66
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 1014 VAITRTRQRLWIWEN 1028
VA+TR R LW+ N
Sbjct: 598 VALTRARHCLWVIGN 612
Score = 39 (18.8 bits), Expect = 6.1e-11, Sum P(4) = 6.1e-11
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 710 GGELDLPFEVTDEQLEMILFPKSSF 734
G E LP V +E E F +S F
Sbjct: 396 GDEFQLPAMVHNEMCEKAKFGRSLF 420
>TAIR|locus:2166163 [details] [associations]
symbol:AT5G37140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00534313 RefSeq:NP_198530.1 UniGene:At.55175
ProteinModelPortal:F4K5W4 SMR:F4K5W4 PRIDE:F4K5W4
EnsemblPlants:AT5G37140.1 GeneID:833686 KEGG:ath:AT5G37140
OMA:TEAKYEH ArrayExpress:F4K5W4 Uniprot:F4K5W4
Length = 692
Score = 486 (176.1 bits), Expect = 3.0e-73, Sum P(3) = 3.0e-73
Identities = 101/180 (56%), Positives = 126/180 (70%)
Query: 253 FCFTKASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGD 312
FC A +IFCTAS + ++ + + LV+DEAAQLKE ES L+L G++HA+LIGD
Sbjct: 359 FCLQNADIIFCTASGAADMNPIRTGSVDLLVVDEAAQLKECESVAALQLSGLRHAVLIGD 418
Query: 313 ECQLPAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIF 372
E QLPAMV + EA GRSLFERL LG KHLL++QYRMHPSIS FPN FY +I
Sbjct: 419 ELQLPAMVHN----EAKFGRSLFERLVLLGHNKHLLNVQYRMHPSISRFPNKEFYGGRIK 474
Query: 373 DSPNVKEKNYEKRFLPGRMYGPYSFINVLDGREE-SIAHSYRNMVEVFVVMKILLNLYKV 431
D+ NV+E Y+KRFL G M+G +SFINV G EE HS +NMVEV V+ +I+ NL+KV
Sbjct: 475 DAANVQESIYQKRFLQGNMFGSFSFINVGRGEEEFGDGHSPKNMVEVAVISEIISNLFKV 534
Score = 263 (97.6 bits), Expect = 3.0e-73, Sum P(3) = 3.0e-73
Identities = 56/126 (44%), Positives = 82/126 (65%)
Query: 146 FAIFLTNVTSNTRIWNSLHM-SGNLKIIKELLCTDSVVKEDCELCPVQSDGIWNDIFGPS 204
F +FL N+T+NTRIWN+LH + N +IK +L +++ E C +C + G + +
Sbjct: 12 FGVFLMNLTTNTRIWNALHNEAANSTLIKSVLQENTLTTEQC-VCESGAHGS-DRVTNII 69
Query: 205 LSSTLNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLLDFCFTKASL--IF 262
S+ LN SQ A+LSCL+ +C+HK +V+LIWGPPGTGKTKTV+ LL FC K S +
Sbjct: 70 RSAKLNSSQEAAILSCLKIRNCNHKHSVKLIWGPPGTGKTKTVATLL-FCLLKLSCKTVV 128
Query: 263 CTASSS 268
C +++
Sbjct: 129 CAPTNT 134
Score = 109 (43.4 bits), Expect = 3.0e-73, Sum P(3) = 3.0e-73
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 456 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNAEDEEDLGKAI 500
HCLW++GN TL S W L+ ++ CF++A DE++L A+
Sbjct: 621 HCLWVIGNETTLALSGSSWAKLISESRTLGCFYDAADEKNLRDAM 665
Score = 53 (23.7 bits), Expect = 2.3e-67, Sum P(3) = 2.3e-67
Identities = 18/88 (20%), Positives = 39/88 (44%)
Query: 757 LHHMAMDGFYGVNNSVTLHSSWESGAEEGLGETERPILRQLFVTVSPKLCFAVKQHISQM 816
L+ ++DGF G + + S+ S +G + +T + + + +
Sbjct: 574 LNVRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVIGNETTLA 633
Query: 817 ISSAFGGKFVAESRLID-IDDAAEFKDI 843
+S + K ++ESR + DAA+ K++
Sbjct: 634 LSGSSWAKLISESRTLGCFYDAADEKNL 661
Score = 41 (19.5 bits), Expect = 4.1e-66, Sum P(3) = 4.1e-66
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 1014 VAITRTRQRLWIWEN 1028
VA+TR R LW+ N
Sbjct: 614 VALTRARHCLWVIGN 628
>TAIR|locus:2152627 [details] [associations]
symbol:AT5G37030 species:3702 "Arabidopsis thaliana"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] EMBL:CP002688 GO:GO:0004519 KO:K10706
IPI:IPI00540124 RefSeq:NP_198519.1 UniGene:At.55172
ProteinModelPortal:F4K5V7 SMR:F4K5V7 PRIDE:F4K5V7
EnsemblPlants:AT5G37030.1 GeneID:833673 KEGG:ath:AT5G37030
Uniprot:F4K5V7
Length = 638
Score = 438 (159.2 bits), Expect = 2.8e-65, Sum P(4) = 2.8e-65
Identities = 92/154 (59%), Positives = 112/154 (72%)
Query: 279 LKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERL 338
++ LV+DEAAQLKE ES L+LPG++HAILIGDE QLPAMV + +A GRSLFERL
Sbjct: 348 IEVLVVDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNDQCEKAKFGRSLFERL 407
Query: 339 SNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNVKEKNYEKRFLPGRMYGPYSFI 398
LG KHLL +QYRMHPSIS FP FY +I D+ NV+E Y+KRFL G M+G +SFI
Sbjct: 408 VLLGHKKHLLDVQYRMHPSISRFPYKEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFI 467
Query: 399 NVLDGREE-SIAHSYRNMVEVFVVMKILLNLYKV 431
NV G+EE S +NMVEV VV +I+ NL+KV
Sbjct: 468 NVGRGKEEFGDGDSPKNMVEVAVVSEIISNLFKV 501
Score = 131 (51.2 bits), Expect = 2.8e-65, Sum P(4) = 2.8e-65
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 456 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNAEDEEDLGKAILGVK 504
HCLW++GN TL R S+W L+ D+ R+CF++A+D++ L A+ V+
Sbjct: 589 HCLWVIGNESTLARSGSIWANLISDSKRRKCFYDAKDDKRLRDAMNAVQ 637
Score = 131 (51.2 bits), Expect = 2.8e-65, Sum P(4) = 2.8e-65
Identities = 36/101 (35%), Positives = 55/101 (54%)
Query: 1 VEQIPLSFQSVNRYFESFVFPLLEETRAQLSSSMEKISEAPFAQVVDLED-SKPYGAMLS 59
++ IP F SVN Y + FV LLEETR +LS+S + +S+A ++ LE +K LS
Sbjct: 31 IKTIPDKFSSVNEYLKCFVPHLLEETRTELSTSFKSLSKAHLFEISSLETMTKESSGSLS 90
Query: 60 DVKVDYWRNRFSNYS-KESYKVLPGDILVLADAKPETASDL 99
+ K+ Y + S +E Y+ GD++ L +P DL
Sbjct: 91 N-KLFYDMSINDALSIREKYQPKCGDLIALTKERPRGVDDL 130
Score = 125 (49.1 bits), Expect = 2.8e-65, Sum P(4) = 2.8e-65
Identities = 35/91 (38%), Positives = 49/91 (53%)
Query: 162 SLHMSGNLKIIKELLCTDSVVKEDCELCPVQSDGIWN-DIFGPSLSSTLNDSQAQAVLSC 220
SL + N +I+ +L ++ E P+ S W ++ SS LN SQ A+LSC
Sbjct: 161 SLGFAPNFDLIQSVLQPNTAGME-----PIVSSRTWGQNVLDIIRSSKLNSSQEAAILSC 215
Query: 221 LRRTHCDHKATVELIWGPPGTGKTKTVSMLL 251
L +HK +V+LIWGP KTKTV+ LL
Sbjct: 216 LETRDSNHKNSVKLIWGPL---KTKTVATLL 243
Score = 56 (24.8 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 24/94 (25%), Positives = 41/94 (43%)
Query: 291 KEVESAIPLKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERLSNLGQAKHLLSI 350
K+ IP K + + +C +P ++E + + L S F+ LS + S+
Sbjct: 28 KQKIKTIPDKFSSVNEYL----KCFVPHLLEETRTE---LSTS-FKSLSK-AHLFEISSL 78
Query: 351 QYRMHPSISSFPNSYFYDNKIFDSPNVKEKNYEK 384
+ S S N FYD I D+ +++EK K
Sbjct: 79 ETMTKESSGSLSNKLFYDMSINDALSIREKYQPK 112
Score = 53 (23.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 37/144 (25%), Positives = 60/144 (41%)
Query: 1400 LNASTRHQSISGETLSVRQILDFHLKTDSSKYVWGDELVLDLTYSEEIICKNRVSVQSLV 1459
+ +S + S LS + D + K +S K +WG + T + ++ ++ +++V
Sbjct: 199 IRSSKLNSSQEAAILSCLETRDSNHK-NSVKLIWGP--LKTKTVATLLLVLLKLRCKTVV 255
Query: 1460 YFWDC--WKDKIVNVIEYLGCLKSQDFSDHGSYGDFCLHYLGVWKQHSNLDTVYL---LL 1514
C IV V L L S +S+H +YG + G K+ DT YL L
Sbjct: 256 ----CAPTNTAIVEVTSRLLAL-SNKYSEHATYGLGNIFLAGNQKRMRIKDTDYLRNVFL 310
Query: 1515 NSDADWVRGLGNSYALWSWKLPSI 1538
+ +R L S W L SI
Sbjct: 311 DHRISKLRKLFLSTCGWKQSLESI 334
Score = 42 (19.8 bits), Expect = 5.0e-56, Sum P(4) = 5.0e-56
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 1007 SELKQLYVAITRTRQRLWIWEN 1028
S ++ VA+TR R LW+ N
Sbjct: 575 SNRQRANVALTRARHCLWVIGN 596
Score = 41 (19.5 bits), Expect = 6.3e-56, Sum P(4) = 6.3e-56
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 1115 SNPKQANVNLREAAKIFEAIGKADSAAKC---FYNLGEYERAGRIYLERREEPELEKA 1169
SN ++ANV L A IG + A+ + NL + + + + +++ L A
Sbjct: 575 SNRQRANVALTRARHCLWVIGNESTLARSGSIWANLISDSKRRKCFYDAKDDKRLRDA 632
Score = 41 (19.5 bits), Expect = 5.8e-11, Sum P(4) = 5.8e-11
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 710 GGELDLPFEVTDEQLEMILFPKSSF 734
G E LP V ++Q E F +S F
Sbjct: 380 GDEFQLPAMVHNDQCEKAKFGRSLF 404
>TAIR|locus:2135472 [details] [associations]
symbol:AT4G05540 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687 GO:GO:0004386
KO:K10706 IPI:IPI00530269 RefSeq:NP_567301.2 UniGene:At.54170
ProteinModelPortal:F4JGH5 SMR:F4JGH5 PRIDE:F4JGH5
EnsemblPlants:AT4G05540.1 GeneID:825906 KEGG:ath:AT4G05540
OMA:WVIGNER Uniprot:F4JGH5
Length = 689
Score = 494 (179.0 bits), Expect = 9.7e-47, Sum P(2) = 9.7e-47
Identities = 103/180 (57%), Positives = 125/180 (69%)
Query: 253 FCFTKASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGD 312
FC A +IFCTAS + ++ + LV+DEAAQLKE ES L+L G+ HA+LIGD
Sbjct: 405 FCLQNAHIIFCTASGAAEMTAERAGSIDMLVVDEAAQLKECESVAALQLQGLHHAVLIGD 464
Query: 313 ECQLPAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIF 372
E QLPAMV+S V +A RSLFERL +LG KHLL++QYRMHPSIS FPN FY KI
Sbjct: 465 ELQLPAMVQSEVCEKAKFVRSLFERLDSLGHKKHLLNVQYRMHPSISLFPNMEFYGGKIS 524
Query: 373 DSPNVKEKNYEKRFLPGRMYGPYSFINVLDGREE-SIAHSYRNMVEVFVVMKILLNLYKV 431
D+ VKE Y+KRFL G M+G +SFINV G+EE HS +NMVE+ VV +IL NL KV
Sbjct: 525 DAEIVKESTYQKRFLQGNMFGSFSFINVGLGKEEFGDGHSPKNMVEIAVVSEILTNLLKV 584
Score = 223 (83.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 72/219 (32%), Positives = 106/219 (48%)
Query: 128 FKVKASKENQIDGANKSLFAIFLTNVTSNTRIWNSLHMS-GNLKIIKELLCTDSVVKEDC 186
F V +SK ID FL +T+NTRIW +LH GNL +IK +L ++ E
Sbjct: 31 FSVHSSKSISIDEQYSFRSGFFLIYLTTNTRIWKALHNGDGNLSLIKSVLQANTADTEQS 90
Query: 187 ELCPVQSDGIWNDIFGPSLSSTLNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKT 246
V S N + S+ LN SQ A+L+CL K +V+LIWGPPGTG TKT
Sbjct: 91 ----VSSRNWGNHVLDIIRSANLNSSQESAILACLETREIRDKTSVKLIWGPPGTGNTKT 146
Query: 247 VSMLLDFCFTKASL--IFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGI 304
V+ LL F S + CT +++ + VA L A KE S+ G+
Sbjct: 147 VATLL-FALLSLSCKTVVCTPTNTAVV-AVASRLL--------ALFKE-SSSTEHSTYGL 195
Query: 305 QHAILIGDECQLPAMVESSVSGEACLGRSLFERLSNLGQ 343
+ +L+G+ ++ ++ + L L +R+S LG+
Sbjct: 196 GNIVLVGNRVRMG--IDER-GNDDLLNVFLDDRISKLGE 231
Score = 66 (28.3 bits), Expect = 9.7e-47, Sum P(2) = 9.7e-47
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 456 HCLWILGNARTLTRKKSV 473
HCLW++GN RTL+ S+
Sbjct: 672 HCLWVIGNERTLSLSGSI 689
Score = 43 (20.2 bits), Expect = 2.3e-44, Sum P(3) = 2.3e-44
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 1007 SELKQLYVAITRTRQRLWIWENMEEFS 1033
S ++ VA+TR R LW+ N S
Sbjct: 658 SNRQRANVALTRARHCLWVIGNERTLS 684
Score = 41 (19.5 bits), Expect = 5.7e-12, Sum P(4) = 5.7e-12
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 710 GGELDLPFEVTDEQLEMILFPKSSF 734
G EL LP V E E F +S F
Sbjct: 463 GDELQLPAMVQSEVCEKAKFVRSLF 487
Score = 38 (18.4 bits), Expect = 2.3e-44, Sum P(3) = 2.3e-44
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 733 SFILGRSGTGKTTILTMKLFQKEKLHHMAMDGFYGVNNSVTLHSSWESGAEEGLG 787
S I R G K T ++ LF L+ ++DGF G + + S+ S +G
Sbjct: 605 SAIQERIGD-KYTSVSDNLFT---LNVRSVDGFQGGEEDIIIISTVRSNCNGNIG 655
Score = 38 (18.4 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 849 DIPAESHPLVITFHKFLM-MLDG 870
+ P + +++TF +F+M DG
Sbjct: 292 ETPEKEEEIILTFGEFVMEKFDG 314
>TAIR|locus:2126480 [details] [associations]
symbol:AT4G30100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009506 "plasmodesma"
evidence=IDA] GO:GO:0009506 EMBL:CP002687 EMBL:AL161576
GO:GO:0004519 eggNOG:COG1112 EMBL:AL078464 KO:K10706
InterPro:IPR026852 PANTHER:PTHR10887:SF27 HOGENOM:HOG000084788
ProtClustDB:CLSN2683158 IPI:IPI00535923 PIR:T08986
RefSeq:NP_194739.1 UniGene:At.31859 ProteinModelPortal:Q9SZW3
SMR:Q9SZW3 STRING:Q9SZW3 PaxDb:Q9SZW3 PRIDE:Q9SZW3
EnsemblPlants:AT4G30100.1 GeneID:829133 KEGG:ath:AT4G30100
TAIR:At4g30100 InParanoid:Q9SZW3 PhylomeDB:Q9SZW3
ArrayExpress:Q9SZW3 Genevestigator:Q9SZW3 Uniprot:Q9SZW3
Length = 1311
Score = 265 (98.3 bits), Expect = 1.0e-26, Sum P(3) = 1.0e-26
Identities = 76/212 (35%), Positives = 105/212 (49%)
Query: 257 KASLIFCTASSS-YKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQ 315
+A ++F T SSS KL +VIDEAAQ EV PL L G +L+GD Q
Sbjct: 915 EAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLAL-GAARCVLVGDPQQ 973
Query: 316 LPAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSP 375
LPA V S +G RSLFER G LL++QYRMHP I FP+ YFY ++ DS
Sbjct: 974 LPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYFYQGRLTDSE 1033
Query: 376 NVKEKNYEKRFLPGRMYGPYSFINVLDGREESIAHS--YRNMVEVFVVMKILLNLYKVHN 433
+V ++ + + PY F ++ GRE S Y N+ E + + L+L +
Sbjct: 1034 SVSTAP-DEIYYKDSVLKPYLFFDISHGRESHRGGSVSYENIDEARFCVGVYLHLQRT-- 1090
Query: 434 VSNLCSSLMKKCINVKYFFLSMHCLWI-LGNA 464
+ +L + + Y L + CL I GNA
Sbjct: 1091 LKSLGGGKVSVGVITPYK-LQLKCLKIEFGNA 1121
Score = 105 (42.0 bits), Expect = 1.0e-26, Sum P(3) = 1.0e-26
Identities = 69/281 (24%), Positives = 123/281 (43%)
Query: 1 VEQIPLSFQSVNRYFESFVFPLLEETRAQLSSSMEKISEA-PFAQV----VDLEDSKPYG 55
++ +P F+S++ Y F L EE RAQL S+ E+++EA + +V ++ + Y
Sbjct: 418 LQSVPERFESMDEYVRVFEPLLFEECRAQLYSTWEELAEANSYMKVRIKFIERRERGWYD 477
Query: 56 AMLSDVKVDYWRNRFSNYSKESYKVLPGDILVLADAKPETASDLRRVGRMWTFVSVTKVT 115
+L+ V N K ++K GD+ VL++ PE+ + VGR+ V +
Sbjct: 478 VILNSV----------NECKWAFK--EGDVAVLSNPVPESEGEHDDVGRVAGTVR-RYIP 524
Query: 116 EDKNESDTTSTSFKVKASKEN--QIDGAN-------KSLFAI-FLTNVTSNTRIWNSLHM 165
D + F V + ++ +ID + K ++ + L ++ + R + +LH
Sbjct: 525 VDTRDPHGAILHFYVGDAYDSGSKIDDNHILRKLKPKEIWHLTVLGSIATTQREYVALHA 584
Query: 166 SGNLKIIKELLCTDSVVKEDCELCPVQSDGIWN--DIFGPSLSSTLNDS----QAQAVLS 219
L + ++++K E P + D F PS + L+ S Q A+
Sbjct: 585 FSQLNPQMQ----NAILKPSPEQFPNYGEQTPTVPDCFTPSFAGHLHRSFNAPQLAAIHW 640
Query: 220 CLRRTHCDHKATVE--------LIWGPPGTGKTKTVSMLLD 252
T + V+ L+ GPPGTGKT TV +L+
Sbjct: 641 AAMHTAAGTSSGVKRQDPWPFTLVQGPPGTGKTHTVWGMLN 681
Score = 86 (35.3 bits), Expect = 1.0e-26, Sum P(3) = 1.0e-26
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 458 LWILGNARTLTRKKSVWEALVHDANARQCFFNAE 491
LW++GNA L + + W AL+ DA AR CF E
Sbjct: 1178 LWVMGNASALMKCED-WAALITDAKARNCFMEME 1210
Score = 56 (24.8 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 1000 AKHNV-LCSELKQLYVAITRTRQRLWIWENMEEFSK 1034
+ H V ++++++ VA+TR ++ LW+ N K
Sbjct: 1154 SNHGVGFVADIRRMNVALTRAKRALWVMGNASALMK 1189
Score = 40 (19.1 bits), Expect = 5.1e-20, Sum P(3) = 5.1e-20
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 23 LEETRAQLSSSMEKISEAPFAQV 45
LEE RA L +S +E F V
Sbjct: 901 LEEARASLEASFANEAEIVFTTV 923
Score = 38 (18.4 bits), Expect = 9.2e-22, Sum P(3) = 9.2e-22
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 1118 KQANVNLREAAKIFEAIGKADSAAKC 1143
++ NV L A + +G A + KC
Sbjct: 1165 RRMNVALTRAKRALWVMGNASALMKC 1190
>UNIPROTKB|F1MVI7 [details] [associations]
symbol:TRANK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR014016 InterPro:IPR014017
Pfam:PF13361 PROSITE:PS50293 PROSITE:PS51198 SMART:SM00248
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0016787 Gene3D:1.25.40.10
GeneTree:ENSGT00620000088104 EMBL:DAAA02053634 IPI:IPI00710435
Ensembl:ENSBTAT00000028598 Uniprot:F1MVI7
Length = 2871
Score = 193 (73.0 bits), Expect = 2.2e-26, Sum P(3) = 2.2e-26
Identities = 86/346 (24%), Positives = 146/346 (42%)
Query: 988 STSPGSFPSFNEAKHNVLCSELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKKKSLVQ 1047
S+S G + N + +L ELKQLY AITR R LWI++ E P F Y+ K+ V+
Sbjct: 1567 SSSQGRAVTMNPEMYKLLNGELKQLYTAITRARVNLWIFDENPEKRAPAFKYFMKRKFVE 1626
Query: 1048 VRQLDDS--LAQAMQV-ASSPEEWKSRGIKLFHEHN-YDMATICFEKAKDSYWEGRSKAT 1103
V + D++ L +M V S+P EW ++G + +H + +A C++K E + A
Sbjct: 1627 VVKTDENKDLDDSMFVKTSTPGEWIAQG-DYYAKHQCWKVAAKCYQKGGALEKEKLALAH 1685
Query: 1104 GLKATADRCRSSNPKQANVNLREAAKIFEAIGKADSAAKCFYNLGEYERAGRIYLERREE 1163
A + + + K+ V E AK + + KC E++ ++ ER +
Sbjct: 1686 NT-ALNMKSKKVSLKEKQVEYLELAKTYLECKEPKLCLKCLSYAKEFQLCAQL-CERLGK 1743
Query: 1164 PELEKAGECFFLAGCYKLAADVYAKGKFFSECLAVCSKGKLFEIGLQYMNHWKQHADTDV 1223
+ A + + CYK A+ + + + F L + + +LFE + +++ +
Sbjct: 1744 --VRDAAYFYKRSQCYKDASRCFEQIQEFDLALKMYCQEELFEEAAMAVEKYEEM----L 1797
Query: 1224 EHAGTDVGLLVRSMEINKIEQEFLEKCAIHYYGLQDKKSMMKFVKSFRSVDLMRKFLKSL 1283
V L S Q +LE A Y + K MM + D + FL S
Sbjct: 1798 RAKALPVSKLTYSAS-----QFYLEAAA-KYLSMNKTKEMMAVLSKLDIEDQL-VFLTSR 1850
Query: 1284 SCFDDLLVLEEESGNFMDAANIARLRGDIFLAVDLLQKAGCFKEAC 1329
+ L G +AA + + G + A L F+ +C
Sbjct: 1851 KRLTEAADLLNREGRREEAALLMKQHGCLLEAARLTADKD-FQASC 1895
Score = 148 (57.2 bits), Expect = 2.2e-26, Sum P(3) = 2.2e-26
Identities = 46/166 (27%), Positives = 89/166 (53%)
Query: 593 YFQVLKVWDILPLEDVPKLVARLDNILAKYTDEFINHCKEKCIEGNLEVPKTWAATSKVV 652
Y +++++WDI+ D KL + I + Y + ++ K ++G + P + A K+
Sbjct: 834 YTEIIRIWDIVL--DHNKLSYSIQAICSAY-NRGLSCILRKKLKGINKGPVS--ANMKIQ 888
Query: 653 RFKNLADIDSDSESDLGGAASDSTSYVENSNVSDSLLLMKFYSLSSGAVSHLLSDRDGGE 712
++ ++ D+E++ GGA ++ + S V +MKF+S S+ S++L+D
Sbjct: 889 KWIPRCYVE-DTEAEKGGARAEPEYFPPASAVETEYNIMKFHSFSTNMASNILNDTTA-T 946
Query: 713 LDLPFEVTDEQLEMI-LFPKSS---FILGRSGTGKTTILTMKLFQK 754
++ PF V + + +I L P+ ++GRSGTGKTT +L++K
Sbjct: 947 VEYPFRVGELEYAVIGLNPRPLEPIILIGRSGTGKTTCCLYRLWKK 992
Score = 125 (49.1 bits), Expect = 2.2e-26, Sum P(3) = 2.2e-26
Identities = 44/146 (30%), Positives = 70/146 (47%)
Query: 851 PAESHPLVITFHKFLMMLDGTLGSSYFERFHDIRKHHGQPETSLIYGEP-PILLESRNDE 909
P + H L + +L+ G +F+ P S ++ P PI+LES +
Sbjct: 1406 PKKIHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPRDSGLFDGPRPIVLESCSVS 1465
Query: 910 NAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYVGKQALVLTIVESKGLEFQ- 968
+ I + GN + FGA QVILV ++ +++I +G ALVLT+ E+KGLEF
Sbjct: 1466 DLAILLRGNKRKT--QPIEFGAHQVILVANEMAKEKIPEELGL-ALVLTVYEAKGLEFDD 1522
Query: 969 VIHYTSQCCNSPFKH-ALFDSTSPGS 993
V+ Y + +K + S +P S
Sbjct: 1523 VLLYNFFTDSEAYKEWKIISSFTPSS 1548
Score = 66 (28.3 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 24/91 (26%), Positives = 43/91 (47%)
Query: 794 LRQLFVTVSPKLCFAVKQHISQMISSAFGGKFVAESRLIDIDDAAEFKDIPN--SFADIP 851
L Q+FVT + LC V+++ ++ S K + + ++ PN D+
Sbjct: 1094 LHQIFVTKNHVLCQEVQRNFVELSKST---KATSHYKPLE----------PNVHKLQDLR 1140
Query: 852 AESHPLVITFHKFLMMLDGTLGSSYFERFHD 882
E+ PL +T + L++LD +L +F R D
Sbjct: 1141 DENFPLFVTSKQLLLLLDASLPKPFFLRNED 1171
Score = 59 (25.8 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 41/192 (21%), Positives = 75/192 (39%)
Query: 1149 EYERAGRIYLERREEPELEKAGECFFLAGCYKLAADVYAK-GK------FFSECLAVCSK 1201
EY + YLE +E P+L +C A ++L A + + GK F+
Sbjct: 1704 EYLELAKTYLECKE-PKL--CLKCLSYAKEFQLCAQLCERLGKVRDAAYFYKRSQCYKDA 1760
Query: 1202 GKLFEIGLQYMNHWKQHADTDV-EHAGTDVGLLVRSMEINKIEQEFLEKCAIHYYGLQDK 1260
+ FE ++ K + ++ E A V + + L A +Y
Sbjct: 1761 SRCFEQIQEFDLALKMYCQEELFEEAAMAVEKYEEMLRAKALPVSKLTYSASQFY----L 1816
Query: 1261 KSMMKFVKSFRSVDLMRKFLKSLSCFDDLLVLEEESGNFMDAANIARLRGDIFLAVDLLQ 1320
++ K++ ++ ++M L L D L+ L +AA++ G A L++
Sbjct: 1817 EAAAKYLSMNKTKEMMA-VLSKLDIEDQLVFLTSRK-RLTEAADLLNREGRREEAALLMK 1874
Query: 1321 KAGCFKEACNVT 1332
+ GC EA +T
Sbjct: 1875 QHGCLLEAARLT 1886
Score = 49 (22.3 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 14/66 (21%), Positives = 29/66 (43%)
Query: 1686 NDVYERVAKW---FDGNSLWKELFESLSWNMGSKSCQGSASCHN-FDELKESHIQKFYKA 1741
N+++ ++ K ++ +WKE+ L + + SC G + +L F +
Sbjct: 1232 NEIWPKMIKGKTSYNPALIWKEIKSFLKGSFEALSCPGGRLTEEAYKQLGRKRCPNFKED 1291
Query: 1742 LVDIYG 1747
+IYG
Sbjct: 1292 RSEIYG 1297
Score = 43 (20.2 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 1460 YFWDCWKDKIVNVIEYLGCLKSQDFSDHGSYGD 1492
YF D +D + N+ L LK +S H YGD
Sbjct: 1311 YFDD--EDVLYNLSRRLSKLKVLPWSIHELYGD 1341
Score = 43 (20.2 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 985 LFDSTSPGSFPSFNEAKHNVLCSELKQLYVAITRTRQRLWI--WENMEEFSKPMFDYWKK 1042
L D++ P F NE LK+ V + T++ L I W+ EE ++ DY ++
Sbjct: 1156 LLDASLPKPFFLRNED------GSLKRSIVGWS-TQEELTITNWQEEEEEAEADGDYSEE 1208
Query: 1043 KSLVQVRQLD 1052
+ V+ R D
Sbjct: 1209 EKTVETRPSD 1218
Score = 41 (19.5 bits), Expect = 9.7e-18, Sum P(3) = 9.7e-18
Identities = 6/19 (31%), Positives = 16/19 (84%)
Query: 1001 KHNVLCSELKQLYVAITRT 1019
K++VLC E+++ +V ++++
Sbjct: 1101 KNHVLCQEVQRNFVELSKS 1119
Score = 38 (18.4 bits), Expect = 4.4e-15, Sum P(3) = 4.4e-15
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 556 KLSSGWRPKKRNVEIIKQFKVERFYIICT 584
K +S ++P + NV ++ + E F + T
Sbjct: 1121 KATSHYKPLEPNVHKLQDLRDENFPLFVT 1149
>UNIPROTKB|G3MYJ1 [details] [associations]
symbol:TRANK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR014016 InterPro:IPR014017
Pfam:PF13361 PROSITE:PS50293 PROSITE:PS51198 SMART:SM00248
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0016787 Gene3D:1.25.40.10 OMA:EQHIHLE
GeneTree:ENSGT00620000088104 EMBL:DAAA02053634
Ensembl:ENSBTAT00000065280 Uniprot:G3MYJ1
Length = 2932
Score = 193 (73.0 bits), Expect = 2.3e-26, Sum P(3) = 2.3e-26
Identities = 86/346 (24%), Positives = 146/346 (42%)
Query: 988 STSPGSFPSFNEAKHNVLCSELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKKKSLVQ 1047
S+S G + N + +L ELKQLY AITR R LWI++ E P F Y+ K+ V+
Sbjct: 1628 SSSQGRAVTMNPEMYKLLNGELKQLYTAITRARVNLWIFDENPEKRAPAFKYFMKRKFVE 1687
Query: 1048 VRQLDDS--LAQAMQV-ASSPEEWKSRGIKLFHEHN-YDMATICFEKAKDSYWEGRSKAT 1103
V + D++ L +M V S+P EW ++G + +H + +A C++K E + A
Sbjct: 1688 VVKTDENKDLDDSMFVKTSTPGEWIAQG-DYYAKHQCWKVAAKCYQKGGALEKEKLALAH 1746
Query: 1104 GLKATADRCRSSNPKQANVNLREAAKIFEAIGKADSAAKCFYNLGEYERAGRIYLERREE 1163
A + + + K+ V E AK + + KC E++ ++ ER +
Sbjct: 1747 NT-ALNMKSKKVSLKEKQVEYLELAKTYLECKEPKLCLKCLSYAKEFQLCAQL-CERLGK 1804
Query: 1164 PELEKAGECFFLAGCYKLAADVYAKGKFFSECLAVCSKGKLFEIGLQYMNHWKQHADTDV 1223
+ A + + CYK A+ + + + F L + + +LFE + +++ +
Sbjct: 1805 --VRDAAYFYKRSQCYKDASRCFEQIQEFDLALKMYCQEELFEEAAMAVEKYEEM----L 1858
Query: 1224 EHAGTDVGLLVRSMEINKIEQEFLEKCAIHYYGLQDKKSMMKFVKSFRSVDLMRKFLKSL 1283
V L S Q +LE A Y + K MM + D + FL S
Sbjct: 1859 RAKALPVSKLTYSAS-----QFYLEAAA-KYLSMNKTKEMMAVLSKLDIEDQL-VFLTSR 1911
Query: 1284 SCFDDLLVLEEESGNFMDAANIARLRGDIFLAVDLLQKAGCFKEAC 1329
+ L G +AA + + G + A L F+ +C
Sbjct: 1912 KRLTEAADLLNREGRREEAALLMKQHGCLLEAARLTADKD-FQASC 1956
Score = 148 (57.2 bits), Expect = 2.3e-26, Sum P(3) = 2.3e-26
Identities = 46/166 (27%), Positives = 89/166 (53%)
Query: 593 YFQVLKVWDILPLEDVPKLVARLDNILAKYTDEFINHCKEKCIEGNLEVPKTWAATSKVV 652
Y +++++WDI+ D KL + I + Y + ++ K ++G + P + A K+
Sbjct: 895 YTEIIRIWDIVL--DHNKLSYSIQAICSAY-NRGLSCILRKKLKGINKGPVS--ANMKIQ 949
Query: 653 RFKNLADIDSDSESDLGGAASDSTSYVENSNVSDSLLLMKFYSLSSGAVSHLLSDRDGGE 712
++ ++ D+E++ GGA ++ + S V +MKF+S S+ S++L+D
Sbjct: 950 KWIPRCYVE-DTEAEKGGARAEPEYFPPASAVETEYNIMKFHSFSTNMASNILNDTTA-T 1007
Query: 713 LDLPFEVTDEQLEMI-LFPKSS---FILGRSGTGKTTILTMKLFQK 754
++ PF V + + +I L P+ ++GRSGTGKTT +L++K
Sbjct: 1008 VEYPFRVGELEYAVIGLNPRPLEPIILIGRSGTGKTTCCLYRLWKK 1053
Score = 125 (49.1 bits), Expect = 2.3e-26, Sum P(3) = 2.3e-26
Identities = 44/146 (30%), Positives = 70/146 (47%)
Query: 851 PAESHPLVITFHKFLMMLDGTLGSSYFERFHDIRKHHGQPETSLIYGEP-PILLESRNDE 909
P + H L + +L+ G +F+ P S ++ P PI+LES +
Sbjct: 1467 PKKIHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPRDSGLFDGPRPIVLESCSVS 1526
Query: 910 NAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYVGKQALVLTIVESKGLEFQ- 968
+ I + GN + FGA QVILV ++ +++I +G ALVLT+ E+KGLEF
Sbjct: 1527 DLAILLRGNKRKT--QPIEFGAHQVILVANEMAKEKIPEELGL-ALVLTVYEAKGLEFDD 1583
Query: 969 VIHYTSQCCNSPFKH-ALFDSTSPGS 993
V+ Y + +K + S +P S
Sbjct: 1584 VLLYNFFTDSEAYKEWKIISSFTPSS 1609
Score = 66 (28.3 bits), Expect = 2.8e-20, Sum P(3) = 2.8e-20
Identities = 24/91 (26%), Positives = 43/91 (47%)
Query: 794 LRQLFVTVSPKLCFAVKQHISQMISSAFGGKFVAESRLIDIDDAAEFKDIPN--SFADIP 851
L Q+FVT + LC V+++ ++ S K + + ++ PN D+
Sbjct: 1155 LHQIFVTKNHVLCQEVQRNFVELSKST---KATSHYKPLE----------PNVHKLQDLR 1201
Query: 852 AESHPLVITFHKFLMMLDGTLGSSYFERFHD 882
E+ PL +T + L++LD +L +F R D
Sbjct: 1202 DENFPLFVTSKQLLLLLDASLPKPFFLRNED 1232
Score = 59 (25.8 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 41/192 (21%), Positives = 75/192 (39%)
Query: 1149 EYERAGRIYLERREEPELEKAGECFFLAGCYKLAADVYAK-GK------FFSECLAVCSK 1201
EY + YLE +E P+L +C A ++L A + + GK F+
Sbjct: 1765 EYLELAKTYLECKE-PKL--CLKCLSYAKEFQLCAQLCERLGKVRDAAYFYKRSQCYKDA 1821
Query: 1202 GKLFEIGLQYMNHWKQHADTDV-EHAGTDVGLLVRSMEINKIEQEFLEKCAIHYYGLQDK 1260
+ FE ++ K + ++ E A V + + L A +Y
Sbjct: 1822 SRCFEQIQEFDLALKMYCQEELFEEAAMAVEKYEEMLRAKALPVSKLTYSASQFY----L 1877
Query: 1261 KSMMKFVKSFRSVDLMRKFLKSLSCFDDLLVLEEESGNFMDAANIARLRGDIFLAVDLLQ 1320
++ K++ ++ ++M L L D L+ L +AA++ G A L++
Sbjct: 1878 EAAAKYLSMNKTKEMMA-VLSKLDIEDQLVFLTSRK-RLTEAADLLNREGRREEAALLMK 1935
Query: 1321 KAGCFKEACNVT 1332
+ GC EA +T
Sbjct: 1936 QHGCLLEAARLT 1947
Score = 49 (22.3 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 14/66 (21%), Positives = 29/66 (43%)
Query: 1686 NDVYERVAKW---FDGNSLWKELFESLSWNMGSKSCQGSASCHN-FDELKESHIQKFYKA 1741
N+++ ++ K ++ +WKE+ L + + SC G + +L F +
Sbjct: 1293 NEIWPKMIKGKTSYNPALIWKEIKSFLKGSFEALSCPGGRLTEEAYKQLGRKRCPNFKED 1352
Query: 1742 LVDIYG 1747
+IYG
Sbjct: 1353 RSEIYG 1358
Score = 43 (20.2 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 1460 YFWDCWKDKIVNVIEYLGCLKSQDFSDHGSYGD 1492
YF D +D + N+ L LK +S H YGD
Sbjct: 1372 YFDD--EDVLYNLSRRLSKLKVLPWSIHELYGD 1402
Score = 43 (20.2 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 985 LFDSTSPGSFPSFNEAKHNVLCSELKQLYVAITRTRQRLWI--WENMEEFSKPMFDYWKK 1042
L D++ P F NE LK+ V + T++ L I W+ EE ++ DY ++
Sbjct: 1217 LLDASLPKPFFLRNED------GSLKRSIVGWS-TQEELTITNWQEEEEEAEADGDYSEE 1269
Query: 1043 KSLVQVRQLD 1052
+ V+ R D
Sbjct: 1270 EKTVETRPSD 1279
Score = 41 (19.5 bits), Expect = 1.0e-17, Sum P(3) = 1.0e-17
Identities = 6/19 (31%), Positives = 16/19 (84%)
Query: 1001 KHNVLCSELKQLYVAITRT 1019
K++VLC E+++ +V ++++
Sbjct: 1162 KNHVLCQEVQRNFVELSKS 1180
Score = 38 (18.4 bits), Expect = 4.7e-15, Sum P(3) = 4.7e-15
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 556 KLSSGWRPKKRNVEIIKQFKVERFYIICT 584
K +S ++P + NV ++ + E F + T
Sbjct: 1182 KATSHYKPLEPNVHKLQDLRDENFPLFVT 1210
>RGD|1563130 [details] [associations]
symbol:Trank1 "tetratricopeptide repeat and ankyrin repeat
containing 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR002110 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR014017 Pfam:PF13361 PROSITE:PS50088
PROSITE:PS50293 SMART:SM00248 RGD:1563130 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0016787 Gene3D:1.25.40.10 CTD:9881
OrthoDB:EOG46Q6RM GeneTree:ENSGT00620000088104 IPI:IPI00563535
RefSeq:NP_001178728.1 UniGene:Rn.228178 Ensembl:ENSRNOT00000028633
GeneID:316022 KEGG:rno:316022 UCSC:RGD:1563130 NextBio:670315
Uniprot:D3ZSG2
Length = 2998
Score = 194 (73.4 bits), Expect = 2.8e-24, Sum P(5) = 2.8e-24
Identities = 89/359 (24%), Positives = 157/359 (43%)
Query: 978 NSPFKHALFDSTSPGSFPSF--NEAKHNVLCSELKQLYVAITRTRQRLWIW-ENMEEFSK 1034
N P + +S S N + +L ELKQLY AITR R LWI+ EN+E+ +
Sbjct: 1678 NCPLLDVPLEKSSSSQARSLMVNPEMYKLLNGELKQLYTAITRARVNLWIFDENLEKRA- 1736
Query: 1035 PMFDYWKKKSLVQVRQLDDS--LAQAMQV-ASSPEEWKSRGIKLFHEHN-YDMATICFEK 1090
P F Y+ ++ VQV + D++ +M V S+P+EW +G + +H + +A C++K
Sbjct: 1737 PAFKYFIRRDFVQVVKTDENKDFDDSMFVKTSTPDEWIIQG-DYYAKHQCWKVAAKCYQK 1795
Query: 1091 AKDSYWEGRSKATGLKATADRCRSSNPKQANVNLREAAKIFEAIGKADSAAKCFYNLGEY 1150
D++ + + A + + +PK+ + E AK + + + KC E+
Sbjct: 1796 G-DAFEKEKLALAHYTALNMKSKKFSPKEKELQYLELAKTYLECNEPKLSLKCLSYAKEF 1854
Query: 1151 ERAGRIYLERREEPELEKAGECFFLAGCYKLAADVYAKGKFFSECLAVCSKGKLFEIGLQ 1210
+ + ++ ER + + A + + C+K A + + + F L + + +LFE
Sbjct: 1855 QLSAQL-CERLGK--IRDAAYFYKRSQCFKDAFRCFEQIQEFDLALRMYCQEELFEEAAI 1911
Query: 1211 YMNHWKQHADTDVEHAGTDVGLLVRSMEINKIEQEFLEKCAIHYYGLQDKKSMMKFVKSF 1270
+ +++ +++ V L S Q +LE A Y K MM V S
Sbjct: 1912 AVEKYEEM----LKNKTFPVPKLSYSAS-----QFYLEAAA-KYLSANKSKEMMA-VLSK 1960
Query: 1271 RSVDLMRKFLKSLSCFDDLLVLEEESGNFMDAANIARLRGDIFLAVDLLQKAGCFKEAC 1329
V+ FLKS + L G +AA + + G + A L F+ +C
Sbjct: 1961 LDVEDQLVFLKSRKRLAEAAELLNREGRKEEAALLMKQHGCLLEAARLTANKD-FQASC 2018
Score = 120 (47.3 bits), Expect = 2.8e-24, Sum P(5) = 2.8e-24
Identities = 43/166 (25%), Positives = 82/166 (49%)
Query: 593 YFQVLKVWDILPLEDVPKLVARLDNILAKYTDEFINHCKEKCIEGNLEVPKTWAATSKVV 652
Y +++++WDI+ D KL + I + YT ++ K ++G + K + + +
Sbjct: 966 YTEIIRIWDIVL--DHCKLSDSIMAICSAYT-RGLSCVLRKKLKG---INKGQVSANMKI 1019
Query: 653 RFKNLADIDSDSESDLGGAASDSTSYVENSNVSDSLLLMKFYSLSSGAVSHLLSDRDGGE 712
+ + D+E++ +D + S V +MKF+S S+ ++L+D
Sbjct: 1020 QKRIPRCYVEDTEAEKSIEQADPEYFPPASAVETEYNIMKFHSFSTSMALNILNDMTA-T 1078
Query: 713 LDLPFEVTDEQLEMI-LFPKSS---FILGRSGTGKTTILTMKLFQK 754
++ PF V + + +I L PK ++GRSGTGKTT +L++K
Sbjct: 1079 VEYPFRVGELEYAVIDLNPKPLEPIILIGRSGTGKTTCCLYRLWKK 1124
Score = 117 (46.2 bits), Expect = 2.8e-24, Sum P(5) = 2.8e-24
Identities = 36/105 (34%), Positives = 55/105 (52%)
Query: 891 ETSLIYGEPPILLESRNDENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYV 950
++ L G P LL+S + + I + GN + FGA QVILV ++ +++I +
Sbjct: 1571 DSGLFDGPKPTLLDSCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANEMAKEKIPEEL 1628
Query: 951 GKQALVLTIVESKGLEFQ-VIHYTSQCCNSPFKH-ALFDSTSPGS 993
G ALVLT+ E+KGLEF V+ Y + +K + S P S
Sbjct: 1629 GL-ALVLTVYEAKGLEFDDVLLYNFFTDSEAYKEWKIISSFIPSS 1672
Score = 76 (31.8 bits), Expect = 2.8e-24, Sum P(5) = 2.8e-24
Identities = 31/115 (26%), Positives = 55/115 (47%)
Query: 773 TLHSSWESGAEEG-LGETERPI--LRQLFVTVSPKLCFAVKQHISQMISSAFGGKFVAES 829
T+ S+ +S A EG + + + L Q+FVT + LC V+++ ++ S K +
Sbjct: 1194 TVESAGDSQAAEGCVPDHPHQLEHLHQIFVTKNHVLCQEVQRNFIELSKST---KATSHY 1250
Query: 830 RLIDIDDAAEFKDIPN--SFADIPAESHPLVITFHKFLMMLDGTLGSSYFERFHD 882
+ +D PN D+ E+ PL +T + L++LD +L +F R D
Sbjct: 1251 KPLD----------PNVHKLQDLRDENFPLFVTSKQLLLLLDASLPKPFFLRNED 1295
Score = 61 (26.5 bits), Expect = 6.9e-11, Sum P(5) = 6.9e-11
Identities = 19/70 (27%), Positives = 33/70 (47%)
Query: 1265 KFVKSFRSVDLMRKFLKSLSCFDDLLVLEEESGNFMDAANIARLRGDIFLAVDLLQKAGC 1324
K++ + +S ++M L L D L+ L+ +AA + G A L+++ GC
Sbjct: 1944 KYLSANKSKEMMA-VLSKLDVEDQLVFLKSRK-RLAEAAELLNREGRKEEAALLMKQHGC 2001
Query: 1325 FKEACNVTLN 1334
EA +T N
Sbjct: 2002 LLEAARLTAN 2011
Score = 49 (22.3 bits), Expect = 1.0e-09, Sum P(5) = 1.0e-09
Identities = 23/100 (23%), Positives = 43/100 (43%)
Query: 1038 DYWKKKSLVQVRQLDDSLAQAMQV----ASSPEEWKSRGIKLFH--EHNYDMATICFEKA 1091
D ++K+S R+ D AMQ +S P+E++ KL H E +Y+ E
Sbjct: 2340 DLFQKESAHSRRESTDLWLSAMQAFLLSSSYPDEFE----KLLHQEEDSYNRELKVLESD 2395
Query: 1092 KDSYWEGRSKATGLKATADRCRSSNPKQANVNLREAAKIF 1131
++ GR + + +K + P + + N+ + F
Sbjct: 2396 RED--RGRGRGSRMKGIEGKFGMLVPNREDENVERSYLCF 2433
Score = 43 (20.2 bits), Expect = 2.8e-24, Sum P(5) = 2.8e-24
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 204 SLSSTLNDSQAQAVLSCLRRTHCD 227
+L L DSQ + +L CLR D
Sbjct: 528 ALPEGLQDSQDRPLLMCLRHEDFD 551
>UNIPROTKB|F1NFZ0 [details] [associations]
symbol:TRANK1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR000212
InterPro:IPR014016 InterPro:IPR014017 Pfam:PF00580 Pfam:PF13361
SMART:SM00248 GO:GO:0005524 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0004003
PANTHER:PTHR11070 OMA:EQHIHLE GeneTree:ENSGT00620000088104
EMBL:AADN02001320 IPI:IPI00602149 Ensembl:ENSGALT00000019695
Uniprot:F1NFZ0
Length = 2477
Score = 250 (93.1 bits), Expect = 3.5e-24, Sum P(5) = 3.5e-24
Identities = 92/367 (25%), Positives = 164/367 (44%)
Query: 985 LFDSTSPGSFP-SFNEAKHNVLCSELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKKK 1043
L D+T+ P SFN + +L ELKQLY AITR R LWI++ + P F Y+ K+
Sbjct: 1155 LEDATAMQKRPTSFNAEMYKMLNGELKQLYTAITRARVNLWIFDENSDKRAPAFKYFIKR 1214
Query: 1044 SLVQVRQLDDS--LAQAMQV-ASSPEEWKSRGIKLFHEHNY-DMATICFEKAKDSYWEGR 1099
VQV + D++ L +M SSPEEW ++G + +H + ++A C++K + E
Sbjct: 1215 GFVQVVKTDENKDLDDSMFAKTSSPEEWIAQG-DYYAKHQFWEVAAKCYQKGGAA--EKS 1271
Query: 1100 SKATGLKATAD-RCRSSNPKQANVNLREAAKIFEAIGKADSAAKCFYNLGEYERAGRIYL 1158
A A + S+P++ + AK + G+ + KC + E+ +
Sbjct: 1272 KLALAHDAVLKVHSKKSSPREKQMEYMTLAKTYLECGEPKLSLKCLFQSKEFRLCAELC- 1330
Query: 1159 ERREEPELEKAGECFFLAGCYKLAADVYAKGKFFSECLAVCSKGKLFEIGLQYMNHWKQH 1218
++ +++ A + CYK A++ Y + + F + + + +L+E + + +++
Sbjct: 1331 --KKLGKMKDAAVYYQKNQCYKEASECYEQIEEFDLAIKMYCQEELYEEAAKAVERYEEM 1388
Query: 1219 ADTDVEHAGTDVGLLVRSMEINKIEQEFLEKCAIHYYGLQDKKSMMKFVKSFRSVDLMRK 1278
+ G V L S N++ +LE A Y + + MM+ + D + +
Sbjct: 1389 LNA----RGQMVSKL--SCTANQL---YLEAAA-KYLSVNRIEEMMQVLSKLDIEDQL-E 1437
Query: 1279 FLKSLSCFDDLLVLEEESGNFMDAANIARLRGDIFLAVDLLQ----KAGCFKEACNVTLN 1334
FLKS C L + G +AA + + G A +L +A C A
Sbjct: 1438 FLKSRGCLHQTADLLKREGRQEEAAKLMKQHGYALEAANLTAIKEFRASCLLAAVRAGTT 1497
Query: 1335 HVISNSL 1341
H ++L
Sbjct: 1498 HCSESNL 1504
Score = 106 (42.4 bits), Expect = 3.5e-24, Sum P(5) = 3.5e-24
Identities = 30/83 (36%), Positives = 46/83 (55%)
Query: 891 ETSLIYGEPPILLESRNDENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYV 950
+ L G P +LES + + I + GN + FGA QV+LV ++ +++I +
Sbjct: 1040 DCGLFDGPKPTVLESCSFSDLAILLRGNKRKT--QPIEFGAHQVVLVANETAKEKIPEEL 1097
Query: 951 GKQALVLTIVESKGLEFQ-VIHY 972
ALVLT+ E+KGLEF V+ Y
Sbjct: 1098 SL-ALVLTVYEAKGLEFDDVLLY 1119
Score = 106 (42.4 bits), Expect = 3.5e-24, Sum P(5) = 3.5e-24
Identities = 43/168 (25%), Positives = 82/168 (48%)
Query: 593 YFQVLKVWDILPLEDVPKLVARLDNILAKYTDEFINHCKEKCIEGNLEVPKTWAATS-KV 651
Y +++++W I+ D KL LDNI Y + ++ K ++G E + + T K
Sbjct: 431 YTEMIRIWAIVL--DHCKLNRVLDNICLSY-NRGLSCILRKKLKGINEGHQNYNVTMHKR 487
Query: 652 VRFKNLADIDSDSESDLGGAASDSTSYVENSNVSD-SLLLMKFYSLSSGAVSHLLSDRDG 710
V + D++ + + Y ++ ++ +MKF+S S+ ++++D
Sbjct: 488 VPRCYVEDLEREKSKE-----HTIPEYFPPASAAEMEYNIMKFHSFSTNMALNIINDVHS 542
Query: 711 GELDLPFEVTDEQLEMI-LFPKSS---FILGRSGTGKTTILTMKLFQK 754
++ PF V + + +I L PK ++GRSGTGKTT +L++K
Sbjct: 543 A-VEYPFRVGELEYAVIDLNPKPMEPIILIGRSGTGKTTCCLYRLWKK 589
Score = 86 (35.3 bits), Expect = 3.5e-22, Sum P(5) = 3.5e-22
Identities = 36/144 (25%), Positives = 64/144 (44%)
Query: 794 LRQLFVTVSPKLCFAVKQHISQMISSAFGGKFVAESRLIDIDDAAEFKDI-PN--SFADI 850
L Q+FVT +P LC V+++ ++ S S++ + FK + PN D+
Sbjct: 687 LHQIFVTKNPVLCQEVQKNFIELSKS---------SKV-----TSHFKPLEPNVHRLQDV 732
Query: 851 PAESHPLVITFHKFLMMLDGTLGSSYFERFHDIRKHHGQPETSLIYGEPP--ILLESRND 908
E+ PL IT + L++LD +L +F R D G + +++ P +++ + D
Sbjct: 733 KDENFPLFITSKQLLLLLDASLPDPFFPRNED-----GSLKRTIVGWSPQEELVIPNWQD 787
Query: 909 ENAIIKIFGNSGDAGGNMVGFGAE 932
E+ GD G+ E
Sbjct: 788 EDEECNAEAEDGDEERTADGYSRE 811
Score = 57 (25.1 bits), Expect = 7.1e-05, Sum P(5) = 7.1e-05
Identities = 17/79 (21%), Positives = 30/79 (37%)
Query: 1074 KLFHEHNYDMATICFEKAKDSYWEGRSKATGLKATADRCRSSNPKQANVNLREAAKIFEA 1133
KL +H Y + K+ + ++A C SN + LREA ++ E
Sbjct: 1463 KLMKQHGYALEAANLTAIKE--FRASCLLAAVRAGTTHCSESNLVDREIMLREALELCEQ 1520
Query: 1134 IGKADSAAKCFYNLGEYER 1152
+ A+ + G +R
Sbjct: 1521 TNQKSGIAEALFLQGAPKR 1539
Score = 43 (20.2 bits), Expect = 3.5e-24, Sum P(5) = 3.5e-24
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 453 LSMHCLWILGNARTLTRKKSVWEALVHDANARQCFFNAEDEEDLGKAILGVKKELDEFDD 512
LS ++ G +KK V E V +N + A DEE IL ++ + EFD+
Sbjct: 275 LSGSAVYSEGRGDDREKKKGVQEFSVGLSNGEK---EAPDEE----TILDIEAYVQEFDN 327
Query: 513 L 513
+
Sbjct: 328 M 328
Score = 41 (19.5 bits), Expect = 1.1e-17, Sum P(5) = 1.1e-17
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 556 KLSSGWRPKKRNVEIIKQFKVERFYIICT 584
K++S ++P + NV ++ K E F + T
Sbjct: 714 KVTSHFKPLEPNVHRLQDVKDENFPLFIT 742
Score = 38 (18.4 bits), Expect = 3.5e-24, Sum P(5) = 3.5e-24
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 1623 HFFDSIFPLDRRESLKMNMITLKGTEFYRNIIKE 1656
HF R+ K + ++G EF +I K+
Sbjct: 2229 HFVFVCMRWKRKACCKAEPVAVEGEEFLSDIFKK 2262
Score = 37 (18.1 bits), Expect = 2.7e-17, Sum P(5) = 2.7e-17
Identities = 5/19 (26%), Positives = 15/19 (78%)
Query: 1001 KHNVLCSELKQLYVAITRT 1019
K+ VLC E+++ ++ ++++
Sbjct: 694 KNPVLCQEVQKNFIELSKS 712
>MGI|MGI:1341834 [details] [associations]
symbol:Trank1 "tetratricopeptide repeat and ankyrin repeat
containing 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR014017
Pfam:PF13361 PROSITE:PS50005 PROSITE:PS50088 PROSITE:PS50293
SMART:SM00248 MGI:MGI:1341834 GO:GO:0005524 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016787
Gene3D:1.25.40.10 CTD:9881 HOVERGEN:HBG108082 OMA:EQHIHLE
OrthoDB:EOG46Q6RM EMBL:AC126677 EMBL:AC113495 EMBL:BC086653
EMBL:AK079552 EMBL:AK129119 IPI:IPI00848384 IPI:IPI00944738
RefSeq:NP_001158131.1 UniGene:Mm.270754 ProteinModelPortal:Q8BV79
SMR:Q8BV79 PhosphoSite:Q8BV79 PRIDE:Q8BV79
Ensembl:ENSMUST00000078626 GeneID:320429 KEGG:mmu:320429
UCSC:uc009rvt.2 UCSC:uc009rvu.1 eggNOG:NOG148247
GeneTree:ENSGT00620000088104 InParanoid:Q8BV79 NextBio:396696
Bgee:Q8BV79 Genevestigator:Q8BV79 Uniprot:Q8BV79
Length = 2999
Score = 195 (73.7 bits), Expect = 8.8e-24, Sum P(5) = 8.8e-24
Identities = 88/357 (24%), Positives = 156/357 (43%)
Query: 980 PFKHALFDSTSPGSFPSF--NEAKHNVLCSELKQLYVAITRTRQRLWIW-ENMEEFSKPM 1036
P + +SP S N + +L ELKQLY AITR R LWI+ EN+E+ + P
Sbjct: 1682 PLVDVPLERSSPSQARSLMVNPEMYKLLNGELKQLYTAITRARVNLWIFDENLEKRA-PA 1740
Query: 1037 FDYWKKKSLVQVRQLDDS--LAQAMQV-ASSPEEWKSRGIKLFHEHN-YDMATICFEKAK 1092
F Y+ ++ VQV + D++ +M V S+P EW +G + +H + +A C++K
Sbjct: 1741 FKYFIRRDFVQVVKTDENKDFDDSMFVKTSTPYEWIIQG-DYYAKHQCWKVAAKCYQKG- 1798
Query: 1093 DSYWEGRSKATGLKATADRCRSSNPKQANVNLREAAKIFEAIGKADSAAKCFYNLGEYER 1152
D+ + + A + + +PK+ + E AK + + + KC E++
Sbjct: 1799 DALEKEKLALAHYTALNMKSKKFSPKEKELQYLELAKTYLECNEPKLSLKCLSYAKEFQL 1858
Query: 1153 AGRIYLERREEPELEKAGECFFLAGCYKLAADVYAKGKFFSECLAVCSKGKLFEIGLQYM 1212
+ ++ ER + + A + + C++ A + + + F L + + +LFE +
Sbjct: 1859 SAQL-CERLGK--IRDAAYFYKRSQCFQDAFRCFEQIQEFDLALRMYCQEELFEEAAIAV 1915
Query: 1213 NHWKQHADTDVEHAGTDVGLLVRSMEINKIEQEFLEKCAIHYYGLQDKKSMMKFVKSFRS 1272
+++ +++ + L S Q +LE A Y K MM V S
Sbjct: 1916 EKYEEM----LKNKTFPIPKLSYSAS-----QFYLEAAA-KYLSANKSKEMMA-VLSKLD 1964
Query: 1273 VDLMRKFLKSLSCFDDLLVLEEESGNFMDAANIARLRGDIFLAVDLLQKAGCFKEAC 1329
V+ FLKS C + L G +AA + + G + A L F+ +C
Sbjct: 1965 VEDQLVFLKSRKCLAEAAELLNREGRREEAALLMKQHGCLLEAARLTANKD-FQASC 2020
Score = 119 (46.9 bits), Expect = 8.8e-24, Sum P(5) = 8.8e-24
Identities = 45/176 (25%), Positives = 85/176 (48%)
Query: 584 TIDIVKESQ-YFQVLKVWDILPLEDVPKLVARLDNILAKYTDEFINHCKEKCIEGNLEVP 642
T + K + Y +++++WDI+ D KL + I + YT ++ K ++G +
Sbjct: 957 TYSLEKSGRVYTEIIRIWDIVL--DHCKLSDSIMAICSAYT-RGLSCVLRKKLKG---IN 1010
Query: 643 KTWAATSKVVRFKNLADIDSDSESDLGGAASDSTSYVENSNVSDSLLLMKFYSLSSGAVS 702
K + + ++ + D+E++ D + S V +MKF+S S+
Sbjct: 1011 KGQVSANMKIQKRIPRCYVEDTEAEKSLEQVDPEYFPPASAVETEYSIMKFHSFSTNMAL 1070
Query: 703 HLLSDRDGGELDLPFEVTDEQLEMI-LFPKSS---FILGRSGTGKTTILTMKLFQK 754
++L+D ++ PF V + + +I L PK ++GRSGTGKTT +L++K
Sbjct: 1071 NILNDMTA-TVEYPFRVGELEYAVIDLNPKPLEPIILIGRSGTGKTTCCLYRLWKK 1125
Score = 118 (46.6 bits), Expect = 8.8e-24, Sum P(5) = 8.8e-24
Identities = 36/105 (34%), Positives = 56/105 (53%)
Query: 891 ETSLIYGEPPILLESRNDENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYV 950
++ L G P LL+S + + I + GN + FGA QVILV ++ +++I +
Sbjct: 1573 DSGLFDGPKPTLLDSCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANEKAKEKIPEEL 1630
Query: 951 GKQALVLTIVESKGLEFQ-VIHYTSQCCNSPFKH-ALFDSTSPGS 993
G ALVLT+ E+KGLEF V+ Y + +K + S +P S
Sbjct: 1631 GL-ALVLTVYEAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPSS 1674
Score = 70 (29.7 bits), Expect = 8.8e-24, Sum P(5) = 8.8e-24
Identities = 25/91 (27%), Positives = 43/91 (47%)
Query: 794 LRQLFVTVSPKLCFAVKQHISQMISSAFGGKFVAESRLIDIDDAAEFKDIPN--SFADIP 851
L Q+FVT + LC V+++ ++ S K + + +D PN D+
Sbjct: 1220 LHQIFVTKNHVLCQEVQRNFIELSKST---KATSHYKPLD----------PNVHKLQDLR 1266
Query: 852 AESHPLVITFHKFLMMLDGTLGSSYFERFHD 882
E+ PL +T + L++LD +L +F R D
Sbjct: 1267 DENFPLFVTSKQLLLLLDASLPKPFFLRNED 1297
Score = 58 (25.5 bits), Expect = 2.7e-09, Sum P(6) = 2.7e-09
Identities = 19/70 (27%), Positives = 33/70 (47%)
Query: 1265 KFVKSFRSVDLMRKFLKSLSCFDDLLVLEEESGNFMDAANIARLRGDIFLAVDLLQKAGC 1324
K++ + +S ++M L L D L+ L+ +AA + G A L+++ GC
Sbjct: 1946 KYLSANKSKEMMA-VLSKLDVEDQLVFLKSRKC-LAEAAELLNREGRREEAALLMKQHGC 2003
Query: 1325 FKEACNVTLN 1334
EA +T N
Sbjct: 2004 LLEAARLTAN 2013
Score = 44 (20.5 bits), Expect = 1.1e-15, Sum P(5) = 1.1e-15
Identities = 24/92 (26%), Positives = 34/92 (36%)
Query: 605 LEDVPKLVARLDNILAKYTDEFIN--HCKEK-CIEGNLEVPKTWAATSKVVRFKNLADID 661
LE VPKLV L +I A N H + CI+ W K +++ D
Sbjct: 308 LEQVPKLVQWLVSIGANIETIGPNPLHALMRLCIQARESQLFRWVMDQKPEWKEHINHRD 367
Query: 662 SDSESDLGGAASDSTSYVENSNVSDSLLLMKF 693
+ L AA+ Y D +L+ F
Sbjct: 368 DAGCTVLHVAAAHFPGYTSRRQTEDVQMLLSF 399
Score = 43 (20.2 bits), Expect = 8.8e-24, Sum P(5) = 8.8e-24
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 204 SLSSTLNDSQAQAVLSCLRRTHCD 227
+L L DSQ + +L CLR D
Sbjct: 530 ALPEGLQDSQDRPLLMCLRHEDFD 553
Score = 40 (19.1 bits), Expect = 2.6e-08, Sum P(5) = 2.6e-08
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 1048 VRQLDDSLAQAMQVASSPEEWKSRG 1072
+RQ +DS + ++V S E + RG
Sbjct: 2380 LRQEEDSYNRELKVLESDREDRGRG 2404
Score = 39 (18.8 bits), Expect = 2.7e-09, Sum P(6) = 2.7e-09
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 1026 WENMEEFSKPMFDYWKKK-SLVQVRQLDDSLAQAMQVASSPEEWK 1069
W+ + F+ P D ++K LV V S +QA + +PE +K
Sbjct: 1664 WKIISSFT-PSSDSREEKWPLVDVPLERSSPSQARSLMVNPEMYK 1707
Score = 39 (18.8 bits), Expect = 1.6e-07, Sum P(6) = 1.6e-07
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1508 DTVYLLLNSDADWVRGLGNSYALWS-WKLPSIDVHQLVSAGKNYWSSELLSVGMKVLYYL 1566
D++++ ++ +W+ G+ YA WK+ A K Y + L L +
Sbjct: 1763 DSMFVKTSTPYEWIIQ-GDYYAKHQCWKV----------AAKCYQKGDALEKEKLALAHY 1811
Query: 1567 EALNKQSSTNSP 1578
ALN +S SP
Sbjct: 1812 TALNMKSKKFSP 1823
Score = 37 (18.1 bits), Expect = 1.1e-15, Sum P(5) = 1.1e-15
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 753 QKEKLHHMAMDGFYGVNNSVTLHSSWESGAEEGLGETER-PILRQLFV 799
+K+KL G G + + + S GA+ G G ++ P+ +L V
Sbjct: 794 KKDKLQRTQRMGSSGCSGNNPVASEAGDGAQAGPGASQLVPVGNRLGV 841
>UNIPROTKB|B7WP88 [details] [associations]
symbol:TRANK1 "TPR and ankyrin repeat-containing protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000212
InterPro:IPR014016 InterPro:IPR014017 Pfam:PF00580 Pfam:PF13361
GO:GO:0005524 GO:GO:0003677 GO:GO:0004003 PANTHER:PTHR11070
EMBL:AC011816 EMBL:AC097360 EMBL:AC105749 HGNC:HGNC:29011
HOGENOM:HOG000168939 HOVERGEN:HBG108082 ChiTaRS:TRANK1
IPI:IPI00927835 Ensembl:ENST00000301807 Ensembl:ENST00000428977
Uniprot:B7WP88
Length = 2375
Score = 195 (73.7 bits), Expect = 1.3e-23, Sum P(5) = 1.3e-23
Identities = 85/358 (23%), Positives = 151/358 (42%)
Query: 978 NSPFKHALFDS--TSPGSFPSFNEAKHNVLCSELKQLYVAITRTRQRLWIWENMEEFSKP 1035
N P D +S G N + +L ELKQLY AITR R LWI++ E P
Sbjct: 1057 NRPLVEVPLDKPGSSQGRSLMVNPEMYKLLNGELKQLYTAITRARVNLWIFDENREKRAP 1116
Query: 1036 MFDYWKKKSLVQVRQLDDS--LAQAMQV-ASSPEEWKSRGIKLFHEHN-YDMATICFEKA 1091
F Y+ ++ VQV + D++ +M V S+P EW ++G + +H + +A C++K
Sbjct: 1117 AFKYFIRRDFVQVVKTDENKDFDDSMFVKTSTPAEWIAQG-DYYAKHQCWKVAAKCYQKG 1175
Query: 1092 KDSYWEGRSKATGLKATADRCRSSNPKQANVNLREAAKIFEAIGKADSAAKCFYNLGEYE 1151
++ + + A + + + +PK+ + E AK + + + KC E++
Sbjct: 1176 -GAFEKEKLALAHDTALSMKSKKVSPKEKQLEYLELAKTYLECKEPTLSLKCLSYAKEFQ 1234
Query: 1152 RAGRIYLERREEPELEKAGECFFLAGCYKLAADVYAKGKFFSECLAVCSKGKLFEIGLQY 1211
+ ++ ER + + A + + CYK A + + + F L + + +LFE
Sbjct: 1235 LSAQL-CERLGK--IRDAAYFYKRSQCYKDAFRCFEQIQEFDLALKMYCQEELFEEAAIA 1291
Query: 1212 MNHWKQHADTDVEHAGTDVGLLVRSMEINKIEQEFLEKCAIHYYGLQDKKSMMKFVKSFR 1271
+ +++ T L + + + Q +LE A Y K MM +
Sbjct: 1292 VEKYEEMLKTKT--------LPISKLSYSA-SQFYLEAAA-KYLSANKMKEMMAVLSKLD 1341
Query: 1272 SVDLMRKFLKSLSCFDDLLVLEEESGNFMDAANIARLRGDIFLAVDLLQKAGCFKEAC 1329
D + FLKS + L G +AA + + G + A L F+ +C
Sbjct: 1342 IEDQL-VFLKSRKRLAEAADLLNREGRREEAALLMKQHGCLLEAARLTADKD-FQASC 1397
Score = 122 (48.0 bits), Expect = 1.3e-23, Sum P(5) = 1.3e-23
Identities = 39/111 (35%), Positives = 58/111 (52%)
Query: 891 ETSLIYGEPPILLESRNDENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYV 950
++ L G P +LES + + I + GN + FGA QVILV ++ +++I +
Sbjct: 949 DSGLFDGPKPTVLESCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANETAKEKIPEEL 1006
Query: 951 GKQALVLTIVESKGLEFQ-VIHYTSQCCNSPFKH-ALFDSTSPGSFPSFNE 999
G ALVLTI E+KGLEF V+ Y + +K + S +P S S E
Sbjct: 1007 GL-ALVLTIYEAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPTSTDSREE 1056
Score = 113 (44.8 bits), Expect = 1.3e-23, Sum P(5) = 1.3e-23
Identities = 41/166 (24%), Positives = 81/166 (48%)
Query: 593 YFQVLKVWDILPLEDVPKLVARLDNILAKYTDEFINHCKEKCIEGNLEVPKTWAATSKVV 652
Y +++++WDI+ D KL + I Y + ++ K ++G + K + + +
Sbjct: 341 YTEIIRIWDIVL--DHCKLADSIKAICNAY-NRGLSCVLRKKLKG---INKGQVSANMKI 394
Query: 653 RFKNLADIDSDSESDLGGAASDSTSYVENSNVSDSLLLMKFYSLSSGAVSHLLSDRDGGE 712
+ + D+E++ G + + S V +MKF+S S+ ++L+D
Sbjct: 395 QKRIPRCYVEDTEAEKGREHVNPEYFPPASAVETEYNIMKFHSFSTNMAFNILNDTTA-T 453
Query: 713 LDLPFEVTDEQLEMI-LFPKSS---FILGRSGTGKTTILTMKLFQK 754
++ PF V + + +I L P+ ++GRSGTGKTT +L++K
Sbjct: 454 VEYPFRVGELEYAVIDLNPRPLEPIILIGRSGTGKTTCCLYRLWKK 499
Score = 70 (29.7 bits), Expect = 1.3e-23, Sum P(5) = 1.3e-23
Identities = 25/91 (27%), Positives = 43/91 (47%)
Query: 794 LRQLFVTVSPKLCFAVKQHISQMISSAFGGKFVAESRLIDIDDAAEFKDIPN--SFADIP 851
L Q+FVT + LC V+++ ++ S K + + +D PN D+
Sbjct: 596 LHQIFVTKNHVLCQEVQRNFIELSKST---KATSHYKPLD----------PNIHKLQDLR 642
Query: 852 AESHPLVITFHKFLMMLDGTLGSSYFERFHD 882
E+ PL +T + L++LD +L +F R D
Sbjct: 643 DENFPLFVTSKQLLLLLDASLPKPFFLRNED 673
Score = 62 (26.9 bits), Expect = 3.5e-10, Sum P(5) = 3.5e-10
Identities = 35/152 (23%), Positives = 66/152 (43%)
Query: 1029 MEEFSKPMFDYWKKKSLVQVRQLDDSLAQAMQVASS-PEEWKSRGIKLFH--EHNYDMAT 1085
++E+ +F+ ++ + L S QA ++S+ PEE++ KL H E NY+
Sbjct: 1713 LKEYIHFLFENESARNRRESTDLWLSAMQAFLLSSNYPEEFE----KLLHQEEDNYNREL 1768
Query: 1086 ICFEKAKDSYWEGRSKATGLKATADRCRSSNPKQANVNLREAAKIFEAIGKADSAAKCFY 1145
E KD GR + + +K + P + + N+ + F I ++ FY
Sbjct: 1769 KALESEKDE--RGRGRGSRIKGIEGKFGMLAPNRDDENMDKTHLCF--IRLLENCIDQFY 1824
Query: 1146 ---NLGEYERAG----RIYLERREEPELEKAG 1170
N +Y+R + ++R +EP + G
Sbjct: 1825 VYRNPEDYKRLFFRFMNVLIKRCKEPLIPSIG 1856
Score = 60 (26.2 bits), Expect = 5.1e-10, Sum P(5) = 5.1e-10
Identities = 42/192 (21%), Positives = 78/192 (40%)
Query: 1149 EYERAGRIYLERREEPELEKAGECFFLAGCYKLAADVYAK-GKFFSECL----AVCSKG- 1202
EY + YLE +E P L +C A ++L+A + + GK + C K
Sbjct: 1206 EYLELAKTYLECKE-PTLSL--KCLSYAKEFQLSAQLCERLGKIRDAAYFYKRSQCYKDA 1262
Query: 1203 -KLFEIGLQYMNHWKQHADTDV-EHAGTDVGLLVRSMEINKIEQEFLEKCAIHYYGLQDK 1260
+ FE ++ K + ++ E A V ++ + L A +Y
Sbjct: 1263 FRCFEQIQEFDLALKMYCQEELFEEAAIAVEKYEEMLKTKTLPISKLSYSASQFY----L 1318
Query: 1261 KSMMKFVKSFRSVDLMRKFLKSLSCFDDLLVLEEESGNFMDAANIARLRGDIFLAVDLLQ 1320
++ K++ + + ++M L L D L+ L+ +AA++ G A L++
Sbjct: 1319 EAAAKYLSANKMKEMMA-VLSKLDIEDQLVFLKSRK-RLAEAADLLNREGRREEAALLMK 1376
Query: 1321 KAGCFKEACNVT 1332
+ GC EA +T
Sbjct: 1377 QHGCLLEAARLT 1388
Score = 38 (18.4 bits), Expect = 1.3e-23, Sum P(5) = 1.3e-23
Identities = 6/36 (16%), Positives = 20/36 (55%)
Query: 1808 KQSFGGVLEFIGTVVRQFLYNGKEVMEWIGKSHTNI 1843
++++ G E + +V + + ++ +W+ K+ T +
Sbjct: 2304 RKAWAGAEEAMTRLVNILILSVRDARDWLMKTETRL 2339
>TAIR|locus:2059088 [details] [associations]
symbol:AT2G19120 "AT2G19120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009506 "plasmodesma" evidence=IDA] GO:GO:0009506
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0004386 GO:GO:0004519
eggNOG:COG1112 EMBL:AC002392 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI00542366 PIR:T00533
RefSeq:NP_179502.1 UniGene:At.52824 ProteinModelPortal:O64476
SMR:O64476 PaxDb:O64476 PRIDE:O64476 EnsemblPlants:AT2G19120.1
GeneID:816429 KEGG:ath:AT2G19120 TAIR:At2g19120
HOGENOM:HOG000084788 InParanoid:O64476 OMA:DWAALIS PhylomeDB:O64476
ProtClustDB:CLSN2683158 ArrayExpress:O64476 Genevestigator:O64476
Uniprot:O64476
Length = 1090
Score = 265 (98.3 bits), Expect = 8.1e-23, Sum P(3) = 8.1e-23
Identities = 76/222 (34%), Positives = 108/222 (48%)
Query: 257 KASLIFCTASSS-YKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQ 315
+A ++F T SSS KL +VIDEAAQ EV PL L G +L+GD Q
Sbjct: 752 EAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLAL-GAARCVLVGDPQQ 810
Query: 316 LPAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSP 375
LPA V S +G RSLFER G LL++QYRMHP I FP+ YFY ++ DS
Sbjct: 811 LPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYFYQGRLKDSE 870
Query: 376 NVKEKNYEKRFLPGRMYGPYSFINVLDGREESIAHS--YRNMVEVFVVMKILLNLYKVHN 433
++ ++ + + PY F N+ GRE S Y N+ E + + ++L K
Sbjct: 871 SISSAP-DEIYYKDPVLRPYLFFNISHGRESHRGGSVSYENVDEARFCVGVYMHLQKT-- 927
Query: 434 VSNLCSSLMKKCINVKYFFLSMHCL-WILGNARTLTRKKSVW 474
+ +L + + + Y L + CL GNA K ++
Sbjct: 928 LKSLGAGKVSVGVITPYK-LQLKCLKHEFGNALGQDELKEIY 968
Score = 89 (36.4 bits), Expect = 8.1e-23, Sum P(3) = 8.1e-23
Identities = 66/273 (24%), Positives = 112/273 (41%)
Query: 1 VEQIPLSFQSVNRYFESFVFPLLEETRAQLSSSMEKISEAPFAQVVDLEDSKPYGAMLSD 60
+ +P F+S+ Y F L EE RAQL S+ +++EA V ++ + D
Sbjct: 254 LRSVPERFESMEEYVRVFEPLLFEECRAQLYSTWVELAEANTYVKVRIKSIERRERGWYD 313
Query: 61 VKVDYWRNRFSNYSKESYKVLPGDILVLADAKPETASDLRRVGRMWTFVSVTKVTEDKNE 120
V + N N K ++K GD+ VL+ PE+ D GR+ V + D +
Sbjct: 314 VIL----NSL-NGCKWAFK--EGDVAVLSTPLPESDEDHEDAGRVAGTVR-RHIPVDTRD 365
Query: 121 SDTTSTSFKVKAS--KENQIDGAN-------KSLFAI-FLTNVTSNTRIWNSLHMSGNLK 170
+ F V S ++ID ++ + ++ + L ++ + R + +LH L
Sbjct: 366 PRGATLHFYVGNSGGTGSKIDDSHILRKLKPQDIWHLTVLGSLATTQREYVALHAFSRLN 425
Query: 171 I-IKELLCTDSVVKEDC--ELCPVQSDGIWNDIFGPSLSSTLNDSQAQAVLSCLRRTHCD 227
++ + S + E P D + F L + N Q A+ T
Sbjct: 426 PQMQNAILNPSPEQFPSYEEQTPATPD-CFTTSFVDHLHRSFNAPQLAAIHWAAMHTAAG 484
Query: 228 HKATVE--------LIWGPPGTGKTKTVSMLLD 252
+ V+ L+ GPPGTGKT TV +L+
Sbjct: 485 TSSGVKKQEPWPFTLVQGPPGTGKTHTVWGMLN 517
Score = 61 (26.5 bits), Expect = 8.1e-23, Sum P(3) = 8.1e-23
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 1002 HNV-LCSELKQLYVAITRTRQRLWIWENMEEFSK 1034
H V S+++++ VA+TR R+ LW+ N K
Sbjct: 993 HGVGFVSDIRRMNVALTRARRALWVMGNASALMK 1026
Score = 40 (19.1 bits), Expect = 8.7e-18, Sum P(3) = 8.7e-18
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 23 LEETRAQLSSSMEKISEAPFAQV 45
LEE RA L +S +E F V
Sbjct: 738 LEEARASLEASFANEAEIVFTTV 760
>TAIR|locus:2130384 [details] [associations]
symbol:MAA3 "MAGATAMA 3" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009553 "embryo sac development"
evidence=IMP] [GO:0009875 "pollen-pistil interaction" evidence=IMP]
[GO:0010183 "pollen tube guidance" evidence=IMP] PROSITE:PS51198
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0004386 GO:GO:0009553 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:Z97339 GO:GO:0010183 EMBL:AL161542 EMBL:EU915246
IPI:IPI00522212 PIR:E71420 RefSeq:NP_193292.3 UniGene:At.33168
ProteinModelPortal:B6SFA4 SMR:B6SFA4 PaxDb:B6SFA4 PRIDE:B6SFA4
EnsemblPlants:AT4G15570.1 GeneID:827233 KEGG:ath:AT4G15570
GeneFarm:2417 TAIR:At4g15570 HOGENOM:HOG000030627 KO:K10706
OMA:TIMREFT PhylomeDB:B6SFA4 ProtClustDB:CLSN2680970
Genevestigator:B6SFA4 GO:GO:0009875 InterPro:IPR026852
PANTHER:PTHR10887:SF27 Uniprot:B6SFA4
Length = 818
Score = 237 (88.5 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 66/199 (33%), Positives = 101/199 (50%)
Query: 239 PGTGKTKT-VSMLLDFCFTKASLIFCTAS-SSYKLHRVAMEQLKFLVIDEAAQLKEVESA 296
P G T T + + +A+++F T S S L + ++IDEAAQ E +
Sbjct: 442 PKQGTTGTDIDSIRTAILEEAAIVFATLSFSGSALLAKSNRGFDVVIIDEAAQAVEPATL 501
Query: 297 IPLKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHP 356
IPL + L+GD QLPA V S+V+ ++ G S+FERL G +L QYRMHP
Sbjct: 502 IPLATR-CKQVFLVGDPKQLPATVISTVAQDSGYGTSMFERLQKAGYPVKMLKTQYRMHP 560
Query: 357 SISSFPNSYFYDNKIFDSPNVKEKNYEKRFLPGRMYGPYSFINVLDGREES---IAHSYR 413
I SFP+ FY+ + D ++ E + + R +GP+ F ++ +G+E S
Sbjct: 561 EIRSFPSKQFYEGALEDGSDI-EAQTTRDWHKYRCFGPFCFFDIHEGKESQHPGATGSRV 619
Query: 414 NMVEVFVVMKI---LLNLY 429
N+ EV V+ I L+ +Y
Sbjct: 620 NLDEVEFVLLIYHRLVTMY 638
Score = 121 (47.7 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 65/260 (25%), Positives = 121/260 (46%)
Query: 7 SFQSVNRYFESFVFPLLEETRAQLSSSM--EKISEAPFAQVVDLEDSKPYGAMLS--DVK 62
+++ V+ YFE+F L EE +AQ+ + E+ S V++ + + + +L + +
Sbjct: 53 TYKDVDDYFETFEPLLFEEVKAQILQNKDGEEASVCKMRLVMECNEGEGFHFLLVTYEHE 112
Query: 63 VDYW--RNRFSNYSKESYK--VLPGDI-LVLADAKPETASDLRRVGRMWTFVSVTKVTED 117
D + +N SKE K P + + + ++L R+ RM+ + ++T++
Sbjct: 113 EDEYLAQNDLLLLSKEEVKGNSFPSSYGFAVVEHRQ---NNLLRL-RMYLAEDIVQITKN 168
Query: 118 KNESDTTS---TSFKVKASKENQIDGANKSLFAIFLTNVTSNTRIWNSLHMSGNLKIIKE 174
S T S +++ + +K +F++ L +++ R + +L +L K+
Sbjct: 169 TKSSRTKSFIQALSNMRSLITSSASPIDKRVFSLKLCGLSTIIREYIALRSVSSLPF-KD 227
Query: 175 LLCTDSVVKEDCELCPVQSDGIWNDIFGPS---LSSTLNDSQAQAVLSCLRRTHCDHKAT 231
L+ T ++ C D W I GP + LN SQ +A+ L R K+
Sbjct: 228 LIFT--AAEKSCGF----GDEAWK-ISGPLNEFFNENLNKSQKEAIDVGLSR-----KSF 275
Query: 232 VELIWGPPGTGKTKTVSMLL 251
V LI GPPGTGKT+T+ +L
Sbjct: 276 V-LIQGPPGTGKTQTILSIL 294
Score = 42 (19.8 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 94 ETASDLRRVGRM---WTFVSVTKVTEDKNESDT 123
E AS + R + W + +TK E KN D+
Sbjct: 11 EEASSVTRFYNIILGWDYKQLTKENERKNRKDS 43
>UNIPROTKB|F1PCE7 [details] [associations]
symbol:TRANK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR014016
InterPro:IPR014017 Pfam:PF00580 Pfam:PF13361 PROSITE:PS50293
SMART:SM00248 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016787 Gene3D:1.25.40.10
GeneTree:ENSGT00620000088104 EMBL:AAEX03013477
Ensembl:ENSCAFT00000036550 Uniprot:F1PCE7
Length = 2935
Score = 194 (73.4 bits), Expect = 2.0e-22, Sum P(5) = 2.0e-22
Identities = 85/350 (24%), Positives = 150/350 (42%)
Query: 988 STSPGSFPSFNEAKHNVLCSELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKKKSLVQ 1047
S+S G N + +L ELKQLY AITR R LWI++ E P F Y+ ++ VQ
Sbjct: 1633 SSSQGRSLMMNPEMYKLLNGELKQLYTAITRARVNLWIFDENPEKRAPAFKYFMRRDFVQ 1692
Query: 1048 VRQLDDS--LAQAMQV-ASSPEEWKSRGIKLFHEHN-YDMATICFEKAKDSYWEGRSKAT 1103
V + D++ +M V S+PEEW ++G + +H + +A C++K +E A
Sbjct: 1693 VVKTDENKDFDDSMFVKTSTPEEWIAQG-DYYAKHQCWKVAAKCYQKG--GAFEKEKLAL 1749
Query: 1104 GLKATAD-RCRSSNPKQANVNLREAAKIFEAIGKADSAAKCFYNLGEYERAGRIYLERRE 1162
+ + + +PK+ + E A+ + + + KC E++ + ++ E+
Sbjct: 1750 AHNTALNMKSKKVSPKEKQMEYLELARTYLECKEPKLSLKCLSYAKEFQLSAQL-CEKLG 1808
Query: 1163 EPELEKAGECFFLAGCYKLAADVYAKGKFFSECLAVCSKGKLFEIGLQYMNHWKQHADTD 1222
+ + A + + CYK A + + + F L + + +LFE A
Sbjct: 1809 K--IRDAAYFYKRSQCYKDAFRCFEQIQEFDLALKMYCQEELFE-----------EAAIA 1855
Query: 1223 VEHAGTDVGLLVRSMEINKIE---QEFLEKCAIHYYGLQDKKSMMKFVKSFRSVDLMRKF 1279
VE + L +++ I+K+ +F + A Y K MM + D + F
Sbjct: 1856 VEKY--EEMLRAKTLPISKLSYSASQFYLEAAAKYLSANKIKEMMAVLSKLDIEDQL-VF 1912
Query: 1280 LKSLSCFDDLLVLEEESGNFMDAANIARLRGDIFLAVDLLQKAGCFKEAC 1329
LKS + L G +AA + + G + A L F+ +C
Sbjct: 1913 LKSRGRLAEAADLLNREGRREEAALLMKQHGCLLEAARLTADKD-FQASC 1961
Score = 123 (48.4 bits), Expect = 2.0e-22, Sum P(5) = 2.0e-22
Identities = 38/111 (34%), Positives = 58/111 (52%)
Query: 891 ETSLIYGEPPILLESRNDENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYV 950
++ L G P +LES + + I + GN + FGA QVILV ++ +++I +
Sbjct: 1513 DSGLFDGPKPTVLESCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANEMAKEKIPEEL 1570
Query: 951 GKQALVLTIVESKGLEFQ-VIHYTSQCCNSPFKH-ALFDSTSPGSFPSFNE 999
G ALVLT+ E+KGLEF V+ Y + +K + S +P S S E
Sbjct: 1571 GL-ALVLTVYEAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPSSSDSRKE 1620
Score = 110 (43.8 bits), Expect = 2.0e-22, Sum P(5) = 2.0e-22
Identities = 43/166 (25%), Positives = 83/166 (50%)
Query: 593 YFQVLKVWDILPLEDVPKLVARLDNILAKYTDEFINHCKEKCIEGNLEVPKTWAATSKVV 652
Y +++++WDI+ D KL + I + Y + ++ K ++G + + +A KV
Sbjct: 901 YTEIIRIWDIVL--DHCKLSDSIKAICSAY-NRGLSCVLRKKLKG-IHQGQV-SANMKVQ 955
Query: 653 RFKNLADIDSDSESDLGGAASDSTSYVENSNVSDSLLLMKFYSLSSGAVSHLLSDRDGGE 712
+ ++ D+E++ + + S V +MKF+S S+ ++LSD
Sbjct: 956 KRIPRCYVE-DTEAEKSREHMNPEYFPPASAVETEYNIMKFHSFSTSMAFNILSDTTT-T 1013
Query: 713 LDLPFEVTDEQLEMI-LFPKSS---FILGRSGTGKTTILTMKLFQK 754
++ PF V + + +I L P+ ++GRSGTGKTT +L++K
Sbjct: 1014 VEYPFRVGELEYAVIDLNPRPLEPIILIGRSGTGKTTCCLYRLWKK 1059
Score = 72 (30.4 bits), Expect = 4.0e-10, Sum P(5) = 4.0e-10
Identities = 45/192 (23%), Positives = 79/192 (41%)
Query: 1149 EYERAGRIYLERREEPELEKAGECFFLAGCYKLAADVYAK-GKFFSECL----AVCSKG- 1202
EY R YLE +E P+L +C A ++L+A + K GK + C K
Sbjct: 1770 EYLELARTYLECKE-PKLSL--KCLSYAKEFQLSAQLCEKLGKIRDAAYFYKRSQCYKDA 1826
Query: 1203 -KLFEIGLQYMNHWKQHADTDV-EHAGTDVGLLVRSMEINKIEQEFLEKCAIHYYGLQDK 1260
+ FE ++ K + ++ E A V + + L A +Y
Sbjct: 1827 FRCFEQIQEFDLALKMYCQEELFEEAAIAVEKYEEMLRAKTLPISKLSYSASQFY----L 1882
Query: 1261 KSMMKFVKSFRSVDLMRKFLKSLSCFDDLLVLEEESGNFMDAANIARLRGDIFLAVDLLQ 1320
++ K++ + + ++M L L D L+ L+ G +AA++ G A L++
Sbjct: 1883 EAAAKYLSANKIKEMMA-VLSKLDIEDQLVFLKSR-GRLAEAADLLNREGRREEAALLMK 1940
Query: 1321 KAGCFKEACNVT 1332
+ GC EA +T
Sbjct: 1941 QHGCLLEAARLT 1952
Score = 66 (28.3 bits), Expect = 2.0e-22, Sum P(5) = 2.0e-22
Identities = 24/91 (26%), Positives = 43/91 (47%)
Query: 794 LRQLFVTVSPKLCFAVKQHISQMISSAFGGKFVAESRLIDIDDAAEFKDIPN--SFADIP 851
L Q+FVT + LC V+++ ++ S K + + ++ PN D+
Sbjct: 1160 LHQIFVTKNHVLCQEVQRNFIELSKST---KATSHYKPLE----------PNVHKLQDLR 1206
Query: 852 AESHPLVITFHKFLMMLDGTLGSSYFERFHD 882
E+ PL +T + L++LD +L +F R D
Sbjct: 1207 DENFPLFVTSKQLLLLLDASLPKPFFLRNED 1237
Score = 42 (19.8 bits), Expect = 2.6e-07, Sum P(5) = 2.6e-07
Identities = 46/216 (21%), Positives = 83/216 (38%)
Query: 1140 AAKCFYNLGEYERAG-------RIYLERREEPELEKAGECFFLAGCY------KLAADVY 1186
AAKC+ G +E+ + ++ ++ EK E LA Y KL+
Sbjct: 1732 AAKCYQKGGAFEKEKLALAHNTALNMKSKKVSPKEKQMEYLELARTYLECKEPKLSLKCL 1791
Query: 1187 AKGKFFSECLAVCSK-GKLFEIGLQYMNHWKQHADTDVEHAGTDVGLLVRSMEINKIEQE 1245
+ K F +C K GK+ + Y + D + ++++ E+
Sbjct: 1792 SYAKEFQLSAQLCEKLGKIRDAAYFYK---RSQCYKDAFRCFEQIQEFDLALKMYCQEEL 1848
Query: 1246 FLEKC-AIHYYG--LQDKK---SMMKFVKSFRSVDLMRKFLKSLSCFDDLLVLEEESGNF 1299
F E A+ Y L+ K S + + S ++ K+L + + + VL + +
Sbjct: 1849 FEEAAIAVEKYEEMLRAKTLPISKLSYSASQFYLEAAAKYLSANKIKEMMAVLSKL--DI 1906
Query: 1300 MDAANIARLRGDIFLAVDLLQKAGCFKEACNVTLNH 1335
D + RG + A DLL + G +EA + H
Sbjct: 1907 EDQLVFLKSRGRLAEAADLLNREGRREEAALLMKQH 1942
Score = 40 (19.1 bits), Expect = 1.9e-12, Sum P(4) = 1.9e-12
Identities = 5/19 (26%), Positives = 16/19 (84%)
Query: 1001 KHNVLCSELKQLYVAITRT 1019
K++VLC E+++ ++ ++++
Sbjct: 1167 KNHVLCQEVQRNFIELSKS 1185
Score = 38 (18.4 bits), Expect = 2.0e-22, Sum P(5) = 2.0e-22
Identities = 6/36 (16%), Positives = 20/36 (55%)
Query: 1808 KQSFGGVLEFIGTVVRQFLYNGKEVMEWIGKSHTNI 1843
++++ G E + +V + + ++ EW+ K+ ++
Sbjct: 2864 RKAWVGAEEVMARLVNSLIPSVRDAQEWLMKTELHL 2899
Score = 38 (18.4 bits), Expect = 1.5e-13, Sum P(4) = 1.5e-13
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 556 KLSSGWRPKKRNVEIIKQFKVERFYIICT 584
K +S ++P + NV ++ + E F + T
Sbjct: 1187 KATSHYKPLEPNVHKLQDLRDENFPLFVT 1215
>UNIPROTKB|F1PD19 [details] [associations]
symbol:TRANK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR014016
InterPro:IPR014017 Pfam:PF00580 Pfam:PF13361 PROSITE:PS50293
SMART:SM00248 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016787 Gene3D:1.25.40.10
GeneTree:ENSGT00620000088104 EMBL:AAEX03013477
Ensembl:ENSCAFT00000007678 Uniprot:F1PD19
Length = 2936
Score = 194 (73.4 bits), Expect = 2.0e-22, Sum P(5) = 2.0e-22
Identities = 85/350 (24%), Positives = 150/350 (42%)
Query: 988 STSPGSFPSFNEAKHNVLCSELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKKKSLVQ 1047
S+S G N + +L ELKQLY AITR R LWI++ E P F Y+ ++ VQ
Sbjct: 1634 SSSQGRSLMMNPEMYKLLNGELKQLYTAITRARVNLWIFDENPEKRAPAFKYFMRRDFVQ 1693
Query: 1048 VRQLDDS--LAQAMQV-ASSPEEWKSRGIKLFHEHN-YDMATICFEKAKDSYWEGRSKAT 1103
V + D++ +M V S+PEEW ++G + +H + +A C++K +E A
Sbjct: 1694 VVKTDENKDFDDSMFVKTSTPEEWIAQG-DYYAKHQCWKVAAKCYQKG--GAFEKEKLAL 1750
Query: 1104 GLKATAD-RCRSSNPKQANVNLREAAKIFEAIGKADSAAKCFYNLGEYERAGRIYLERRE 1162
+ + + +PK+ + E A+ + + + KC E++ + ++ E+
Sbjct: 1751 AHNTALNMKSKKVSPKEKQMEYLELARTYLECKEPKLSLKCLSYAKEFQLSAQL-CEKLG 1809
Query: 1163 EPELEKAGECFFLAGCYKLAADVYAKGKFFSECLAVCSKGKLFEIGLQYMNHWKQHADTD 1222
+ + A + + CYK A + + + F L + + +LFE A
Sbjct: 1810 K--IRDAAYFYKRSQCYKDAFRCFEQIQEFDLALKMYCQEELFE-----------EAAIA 1856
Query: 1223 VEHAGTDVGLLVRSMEINKIE---QEFLEKCAIHYYGLQDKKSMMKFVKSFRSVDLMRKF 1279
VE + L +++ I+K+ +F + A Y K MM + D + F
Sbjct: 1857 VEKY--EEMLRAKTLPISKLSYSASQFYLEAAAKYLSANKIKEMMAVLSKLDIEDQL-VF 1913
Query: 1280 LKSLSCFDDLLVLEEESGNFMDAANIARLRGDIFLAVDLLQKAGCFKEAC 1329
LKS + L G +AA + + G + A L F+ +C
Sbjct: 1914 LKSRGRLAEAADLLNREGRREEAALLMKQHGCLLEAARLTADKD-FQASC 1962
Score = 123 (48.4 bits), Expect = 2.0e-22, Sum P(5) = 2.0e-22
Identities = 38/111 (34%), Positives = 58/111 (52%)
Query: 891 ETSLIYGEPPILLESRNDENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYV 950
++ L G P +LES + + I + GN + FGA QVILV ++ +++I +
Sbjct: 1514 DSGLFDGPKPTVLESCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANEMAKEKIPEEL 1571
Query: 951 GKQALVLTIVESKGLEFQ-VIHYTSQCCNSPFKH-ALFDSTSPGSFPSFNE 999
G ALVLT+ E+KGLEF V+ Y + +K + S +P S S E
Sbjct: 1572 GL-ALVLTVYEAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPSSSDSRKE 1621
Score = 110 (43.8 bits), Expect = 2.0e-22, Sum P(5) = 2.0e-22
Identities = 43/166 (25%), Positives = 83/166 (50%)
Query: 593 YFQVLKVWDILPLEDVPKLVARLDNILAKYTDEFINHCKEKCIEGNLEVPKTWAATSKVV 652
Y +++++WDI+ D KL + I + Y + ++ K ++G + + +A KV
Sbjct: 902 YTEIIRIWDIVL--DHCKLSDSIKAICSAY-NRGLSCVLRKKLKG-IHQGQV-SANMKVQ 956
Query: 653 RFKNLADIDSDSESDLGGAASDSTSYVENSNVSDSLLLMKFYSLSSGAVSHLLSDRDGGE 712
+ ++ D+E++ + + S V +MKF+S S+ ++LSD
Sbjct: 957 KRIPRCYVE-DTEAEKSREHMNPEYFPPASAVETEYNIMKFHSFSTSMAFNILSDTTT-T 1014
Query: 713 LDLPFEVTDEQLEMI-LFPKSS---FILGRSGTGKTTILTMKLFQK 754
++ PF V + + +I L P+ ++GRSGTGKTT +L++K
Sbjct: 1015 VEYPFRVGELEYAVIDLNPRPLEPIILIGRSGTGKTTCCLYRLWKK 1060
Score = 72 (30.4 bits), Expect = 4.0e-10, Sum P(5) = 4.0e-10
Identities = 45/192 (23%), Positives = 79/192 (41%)
Query: 1149 EYERAGRIYLERREEPELEKAGECFFLAGCYKLAADVYAK-GKFFSECL----AVCSKG- 1202
EY R YLE +E P+L +C A ++L+A + K GK + C K
Sbjct: 1771 EYLELARTYLECKE-PKLSL--KCLSYAKEFQLSAQLCEKLGKIRDAAYFYKRSQCYKDA 1827
Query: 1203 -KLFEIGLQYMNHWKQHADTDV-EHAGTDVGLLVRSMEINKIEQEFLEKCAIHYYGLQDK 1260
+ FE ++ K + ++ E A V + + L A +Y
Sbjct: 1828 FRCFEQIQEFDLALKMYCQEELFEEAAIAVEKYEEMLRAKTLPISKLSYSASQFY----L 1883
Query: 1261 KSMMKFVKSFRSVDLMRKFLKSLSCFDDLLVLEEESGNFMDAANIARLRGDIFLAVDLLQ 1320
++ K++ + + ++M L L D L+ L+ G +AA++ G A L++
Sbjct: 1884 EAAAKYLSANKIKEMMA-VLSKLDIEDQLVFLKSR-GRLAEAADLLNREGRREEAALLMK 1941
Query: 1321 KAGCFKEACNVT 1332
+ GC EA +T
Sbjct: 1942 QHGCLLEAARLT 1953
Score = 66 (28.3 bits), Expect = 2.0e-22, Sum P(5) = 2.0e-22
Identities = 24/91 (26%), Positives = 43/91 (47%)
Query: 794 LRQLFVTVSPKLCFAVKQHISQMISSAFGGKFVAESRLIDIDDAAEFKDIPN--SFADIP 851
L Q+FVT + LC V+++ ++ S K + + ++ PN D+
Sbjct: 1161 LHQIFVTKNHVLCQEVQRNFIELSKST---KATSHYKPLE----------PNVHKLQDLR 1207
Query: 852 AESHPLVITFHKFLMMLDGTLGSSYFERFHD 882
E+ PL +T + L++LD +L +F R D
Sbjct: 1208 DENFPLFVTSKQLLLLLDASLPKPFFLRNED 1238
Score = 42 (19.8 bits), Expect = 2.6e-07, Sum P(5) = 2.6e-07
Identities = 46/216 (21%), Positives = 83/216 (38%)
Query: 1140 AAKCFYNLGEYERAG-------RIYLERREEPELEKAGECFFLAGCY------KLAADVY 1186
AAKC+ G +E+ + ++ ++ EK E LA Y KL+
Sbjct: 1733 AAKCYQKGGAFEKEKLALAHNTALNMKSKKVSPKEKQMEYLELARTYLECKEPKLSLKCL 1792
Query: 1187 AKGKFFSECLAVCSK-GKLFEIGLQYMNHWKQHADTDVEHAGTDVGLLVRSMEINKIEQE 1245
+ K F +C K GK+ + Y + D + ++++ E+
Sbjct: 1793 SYAKEFQLSAQLCEKLGKIRDAAYFYK---RSQCYKDAFRCFEQIQEFDLALKMYCQEEL 1849
Query: 1246 FLEKC-AIHYYG--LQDKK---SMMKFVKSFRSVDLMRKFLKSLSCFDDLLVLEEESGNF 1299
F E A+ Y L+ K S + + S ++ K+L + + + VL + +
Sbjct: 1850 FEEAAIAVEKYEEMLRAKTLPISKLSYSASQFYLEAAAKYLSANKIKEMMAVLSKL--DI 1907
Query: 1300 MDAANIARLRGDIFLAVDLLQKAGCFKEACNVTLNH 1335
D + RG + A DLL + G +EA + H
Sbjct: 1908 EDQLVFLKSRGRLAEAADLLNREGRREEAALLMKQH 1943
Score = 40 (19.1 bits), Expect = 1.9e-12, Sum P(4) = 1.9e-12
Identities = 5/19 (26%), Positives = 16/19 (84%)
Query: 1001 KHNVLCSELKQLYVAITRT 1019
K++VLC E+++ ++ ++++
Sbjct: 1168 KNHVLCQEVQRNFIELSKS 1186
Score = 38 (18.4 bits), Expect = 2.0e-22, Sum P(5) = 2.0e-22
Identities = 6/36 (16%), Positives = 20/36 (55%)
Query: 1808 KQSFGGVLEFIGTVVRQFLYNGKEVMEWIGKSHTNI 1843
++++ G E + +V + + ++ EW+ K+ ++
Sbjct: 2865 RKAWVGAEEVMARLVNSLIPSVRDAQEWLMKTELHL 2900
Score = 38 (18.4 bits), Expect = 1.5e-13, Sum P(4) = 1.5e-13
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 556 KLSSGWRPKKRNVEIIKQFKVERFYIICT 584
K +S ++P + NV ++ + E F + T
Sbjct: 1188 KATSHYKPLEPNVHKLQDLRDENFPLFVT 1216
>UNIPROTKB|J9NSW6 [details] [associations]
symbol:TRANK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR014016
InterPro:IPR014017 InterPro:IPR019734 Pfam:PF00580 Pfam:PF13361
PROSITE:PS50293 SMART:SM00028 SMART:SM00248 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0016787 Gene3D:1.25.40.10 OMA:EQHIHLE
GeneTree:ENSGT00620000088104 EMBL:AAEX03013477
Ensembl:ENSCAFT00000043491 Uniprot:J9NSW6
Length = 2979
Score = 194 (73.4 bits), Expect = 2.2e-22, Sum P(5) = 2.2e-22
Identities = 85/350 (24%), Positives = 150/350 (42%)
Query: 988 STSPGSFPSFNEAKHNVLCSELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKKKSLVQ 1047
S+S G N + +L ELKQLY AITR R LWI++ E P F Y+ ++ VQ
Sbjct: 1677 SSSQGRSLMMNPEMYKLLNGELKQLYTAITRARVNLWIFDENPEKRAPAFKYFMRRDFVQ 1736
Query: 1048 VRQLDDS--LAQAMQV-ASSPEEWKSRGIKLFHEHN-YDMATICFEKAKDSYWEGRSKAT 1103
V + D++ +M V S+PEEW ++G + +H + +A C++K +E A
Sbjct: 1737 VVKTDENKDFDDSMFVKTSTPEEWIAQG-DYYAKHQCWKVAAKCYQKG--GAFEKEKLAL 1793
Query: 1104 GLKATAD-RCRSSNPKQANVNLREAAKIFEAIGKADSAAKCFYNLGEYERAGRIYLERRE 1162
+ + + +PK+ + E A+ + + + KC E++ + ++ E+
Sbjct: 1794 AHNTALNMKSKKVSPKEKQMEYLELARTYLECKEPKLSLKCLSYAKEFQLSAQL-CEKLG 1852
Query: 1163 EPELEKAGECFFLAGCYKLAADVYAKGKFFSECLAVCSKGKLFEIGLQYMNHWKQHADTD 1222
+ + A + + CYK A + + + F L + + +LFE A
Sbjct: 1853 K--IRDAAYFYKRSQCYKDAFRCFEQIQEFDLALKMYCQEELFE-----------EAAIA 1899
Query: 1223 VEHAGTDVGLLVRSMEINKIE---QEFLEKCAIHYYGLQDKKSMMKFVKSFRSVDLMRKF 1279
VE + L +++ I+K+ +F + A Y K MM + D + F
Sbjct: 1900 VEKY--EEMLRAKTLPISKLSYSASQFYLEAAAKYLSANKIKEMMAVLSKLDIEDQL-VF 1956
Query: 1280 LKSLSCFDDLLVLEEESGNFMDAANIARLRGDIFLAVDLLQKAGCFKEAC 1329
LKS + L G +AA + + G + A L F+ +C
Sbjct: 1957 LKSRGRLAEAADLLNREGRREEAALLMKQHGCLLEAARLTADKD-FQASC 2005
Score = 123 (48.4 bits), Expect = 2.2e-22, Sum P(5) = 2.2e-22
Identities = 38/111 (34%), Positives = 58/111 (52%)
Query: 891 ETSLIYGEPPILLESRNDENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYV 950
++ L G P +LES + + I + GN + FGA QVILV ++ +++I +
Sbjct: 1557 DSGLFDGPKPTVLESCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANEMAKEKIPEEL 1614
Query: 951 GKQALVLTIVESKGLEFQ-VIHYTSQCCNSPFKH-ALFDSTSPGSFPSFNE 999
G ALVLT+ E+KGLEF V+ Y + +K + S +P S S E
Sbjct: 1615 GL-ALVLTVYEAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPSSSDSRKE 1664
Score = 110 (43.8 bits), Expect = 2.2e-22, Sum P(5) = 2.2e-22
Identities = 43/166 (25%), Positives = 83/166 (50%)
Query: 593 YFQVLKVWDILPLEDVPKLVARLDNILAKYTDEFINHCKEKCIEGNLEVPKTWAATSKVV 652
Y +++++WDI+ D KL + I + Y + ++ K ++G + + +A KV
Sbjct: 945 YTEIIRIWDIVL--DHCKLSDSIKAICSAY-NRGLSCVLRKKLKG-IHQGQV-SANMKVQ 999
Query: 653 RFKNLADIDSDSESDLGGAASDSTSYVENSNVSDSLLLMKFYSLSSGAVSHLLSDRDGGE 712
+ ++ D+E++ + + S V +MKF+S S+ ++LSD
Sbjct: 1000 KRIPRCYVE-DTEAEKSREHMNPEYFPPASAVETEYNIMKFHSFSTSMAFNILSDTTT-T 1057
Query: 713 LDLPFEVTDEQLEMI-LFPKSS---FILGRSGTGKTTILTMKLFQK 754
++ PF V + + +I L P+ ++GRSGTGKTT +L++K
Sbjct: 1058 VEYPFRVGELEYAVIDLNPRPLEPIILIGRSGTGKTTCCLYRLWKK 1103
Score = 72 (30.4 bits), Expect = 4.3e-10, Sum P(5) = 4.3e-10
Identities = 45/192 (23%), Positives = 79/192 (41%)
Query: 1149 EYERAGRIYLERREEPELEKAGECFFLAGCYKLAADVYAK-GKFFSECL----AVCSKG- 1202
EY R YLE +E P+L +C A ++L+A + K GK + C K
Sbjct: 1814 EYLELARTYLECKE-PKLSL--KCLSYAKEFQLSAQLCEKLGKIRDAAYFYKRSQCYKDA 1870
Query: 1203 -KLFEIGLQYMNHWKQHADTDV-EHAGTDVGLLVRSMEINKIEQEFLEKCAIHYYGLQDK 1260
+ FE ++ K + ++ E A V + + L A +Y
Sbjct: 1871 FRCFEQIQEFDLALKMYCQEELFEEAAIAVEKYEEMLRAKTLPISKLSYSASQFY----L 1926
Query: 1261 KSMMKFVKSFRSVDLMRKFLKSLSCFDDLLVLEEESGNFMDAANIARLRGDIFLAVDLLQ 1320
++ K++ + + ++M L L D L+ L+ G +AA++ G A L++
Sbjct: 1927 EAAAKYLSANKIKEMMA-VLSKLDIEDQLVFLKSR-GRLAEAADLLNREGRREEAALLMK 1984
Query: 1321 KAGCFKEACNVT 1332
+ GC EA +T
Sbjct: 1985 QHGCLLEAARLT 1996
Score = 66 (28.3 bits), Expect = 2.2e-22, Sum P(5) = 2.2e-22
Identities = 24/91 (26%), Positives = 43/91 (47%)
Query: 794 LRQLFVTVSPKLCFAVKQHISQMISSAFGGKFVAESRLIDIDDAAEFKDIPN--SFADIP 851
L Q+FVT + LC V+++ ++ S K + + ++ PN D+
Sbjct: 1204 LHQIFVTKNHVLCQEVQRNFIELSKST---KATSHYKPLE----------PNVHKLQDLR 1250
Query: 852 AESHPLVITFHKFLMMLDGTLGSSYFERFHD 882
E+ PL +T + L++LD +L +F R D
Sbjct: 1251 DENFPLFVTSKQLLLLLDASLPKPFFLRNED 1281
Score = 42 (19.8 bits), Expect = 2.8e-07, Sum P(5) = 2.8e-07
Identities = 46/216 (21%), Positives = 83/216 (38%)
Query: 1140 AAKCFYNLGEYERAG-------RIYLERREEPELEKAGECFFLAGCY------KLAADVY 1186
AAKC+ G +E+ + ++ ++ EK E LA Y KL+
Sbjct: 1776 AAKCYQKGGAFEKEKLALAHNTALNMKSKKVSPKEKQMEYLELARTYLECKEPKLSLKCL 1835
Query: 1187 AKGKFFSECLAVCSK-GKLFEIGLQYMNHWKQHADTDVEHAGTDVGLLVRSMEINKIEQE 1245
+ K F +C K GK+ + Y + D + ++++ E+
Sbjct: 1836 SYAKEFQLSAQLCEKLGKIRDAAYFYK---RSQCYKDAFRCFEQIQEFDLALKMYCQEEL 1892
Query: 1246 FLEKC-AIHYYG--LQDKK---SMMKFVKSFRSVDLMRKFLKSLSCFDDLLVLEEESGNF 1299
F E A+ Y L+ K S + + S ++ K+L + + + VL + +
Sbjct: 1893 FEEAAIAVEKYEEMLRAKTLPISKLSYSASQFYLEAAAKYLSANKIKEMMAVLSKL--DI 1950
Query: 1300 MDAANIARLRGDIFLAVDLLQKAGCFKEACNVTLNH 1335
D + RG + A DLL + G +EA + H
Sbjct: 1951 EDQLVFLKSRGRLAEAADLLNREGRREEAALLMKQH 1986
Score = 40 (19.1 bits), Expect = 2.0e-12, Sum P(4) = 2.0e-12
Identities = 5/19 (26%), Positives = 16/19 (84%)
Query: 1001 KHNVLCSELKQLYVAITRT 1019
K++VLC E+++ ++ ++++
Sbjct: 1211 KNHVLCQEVQRNFIELSKS 1229
Score = 38 (18.4 bits), Expect = 2.2e-22, Sum P(5) = 2.2e-22
Identities = 6/36 (16%), Positives = 20/36 (55%)
Query: 1808 KQSFGGVLEFIGTVVRQFLYNGKEVMEWIGKSHTNI 1843
++++ G E + +V + + ++ EW+ K+ ++
Sbjct: 2908 RKAWVGAEEVMARLVNSLIPSVRDAQEWLMKTELHL 2943
Score = 38 (18.4 bits), Expect = 1.6e-13, Sum P(4) = 1.6e-13
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 556 KLSSGWRPKKRNVEIIKQFKVERFYIICT 584
K +S ++P + NV ++ + E F + T
Sbjct: 1231 KATSHYKPLEPNVHKLQDLRDENFPLFVT 1259
>UNIPROTKB|O15050 [details] [associations]
symbol:TRANK1 "TPR and ankyrin repeat-containing protein 1"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR014016
InterPro:IPR014017 Pfam:PF00580 Pfam:PF13361 PROSITE:PS50005
PROSITE:PS50088 PROSITE:PS50293 SMART:SM00248 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0016787 Gene3D:1.25.40.10 EMBL:AC011816
EMBL:AC097360 EMBL:AC105749 EMBL:AB002340 EMBL:AK096678
IPI:IPI00847543 RefSeq:NP_055646.2 UniGene:Hs.170999
ProteinModelPortal:O15050 SMR:O15050 IntAct:O15050
PhosphoSite:O15050 PaxDb:O15050 PRIDE:O15050
Ensembl:ENST00000429976 GeneID:9881 KEGG:hsa:9881 UCSC:uc003cgj.3
CTD:9881 GeneCards:GC03M036845 H-InvDB:HIX0003166 HGNC:HGNC:29011
HPA:HPA035508 neXtProt:NX_O15050 PharmGKB:PA165698606
eggNOG:NOG67722 HOGENOM:HOG000168939 HOVERGEN:HBG108082 OMA:EQHIHLE
OrthoDB:EOG46Q6RM ChiTaRS:TRANK1 GenomeRNAi:9881 NextBio:37241
ArrayExpress:O15050 Bgee:O15050 Genevestigator:O15050
Uniprot:O15050
Length = 2925
Score = 195 (73.7 bits), Expect = 4.8e-22, Sum P(6) = 4.8e-22
Identities = 85/358 (23%), Positives = 151/358 (42%)
Query: 978 NSPFKHALFDS--TSPGSFPSFNEAKHNVLCSELKQLYVAITRTRQRLWIWENMEEFSKP 1035
N P D +S G N + +L ELKQLY AITR R LWI++ E P
Sbjct: 1607 NRPLVEVPLDKPGSSQGRSLMVNPEMYKLLNGELKQLYTAITRARVNLWIFDENREKRAP 1666
Query: 1036 MFDYWKKKSLVQVRQLDDS--LAQAMQV-ASSPEEWKSRGIKLFHEHN-YDMATICFEKA 1091
F Y+ ++ VQV + D++ +M V S+P EW ++G + +H + +A C++K
Sbjct: 1667 AFKYFIRRDFVQVVKTDENKDFDDSMFVKTSTPAEWIAQG-DYYAKHQCWKVAAKCYQKG 1725
Query: 1092 KDSYWEGRSKATGLKATADRCRSSNPKQANVNLREAAKIFEAIGKADSAAKCFYNLGEYE 1151
++ + + A + + + +PK+ + E AK + + + KC E++
Sbjct: 1726 -GAFEKEKLALAHDTALSMKSKKVSPKEKQLEYLELAKTYLECKEPTLSLKCLSYAKEFQ 1784
Query: 1152 RAGRIYLERREEPELEKAGECFFLAGCYKLAADVYAKGKFFSECLAVCSKGKLFEIGLQY 1211
+ ++ ER + + A + + CYK A + + + F L + + +LFE
Sbjct: 1785 LSAQL-CERLGK--IRDAAYFYKRSQCYKDAFRCFEQIQEFDLALKMYCQEELFEEAAIA 1841
Query: 1212 MNHWKQHADTDVEHAGTDVGLLVRSMEINKIEQEFLEKCAIHYYGLQDKKSMMKFVKSFR 1271
+ +++ T L + + + Q +LE A Y K MM +
Sbjct: 1842 VEKYEEMLKTKT--------LPISKLSYSA-SQFYLEAAA-KYLSANKMKEMMAVLSKLD 1891
Query: 1272 SVDLMRKFLKSLSCFDDLLVLEEESGNFMDAANIARLRGDIFLAVDLLQKAGCFKEAC 1329
D + FLKS + L G +AA + + G + A L F+ +C
Sbjct: 1892 IEDQL-VFLKSRKRLAEAADLLNREGRREEAALLMKQHGCLLEAARLTADKD-FQASC 1947
Score = 122 (48.0 bits), Expect = 4.8e-22, Sum P(6) = 4.8e-22
Identities = 39/111 (35%), Positives = 58/111 (52%)
Query: 891 ETSLIYGEPPILLESRNDENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYV 950
++ L G P +LES + + I + GN + FGA QVILV ++ +++I +
Sbjct: 1499 DSGLFDGPKPTVLESCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANETAKEKIPEEL 1556
Query: 951 GKQALVLTIVESKGLEFQ-VIHYTSQCCNSPFKH-ALFDSTSPGSFPSFNE 999
G ALVLTI E+KGLEF V+ Y + +K + S +P S S E
Sbjct: 1557 GL-ALVLTIYEAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTPTSTDSREE 1606
Score = 113 (44.8 bits), Expect = 4.8e-22, Sum P(6) = 4.8e-22
Identities = 41/166 (24%), Positives = 81/166 (48%)
Query: 593 YFQVLKVWDILPLEDVPKLVARLDNILAKYTDEFINHCKEKCIEGNLEVPKTWAATSKVV 652
Y +++++WDI+ D KL + I Y + ++ K ++G + K + + +
Sbjct: 891 YTEIIRIWDIVL--DHCKLADSIKAICNAY-NRGLSCVLRKKLKG---INKGQVSANMKI 944
Query: 653 RFKNLADIDSDSESDLGGAASDSTSYVENSNVSDSLLLMKFYSLSSGAVSHLLSDRDGGE 712
+ + D+E++ G + + S V +MKF+S S+ ++L+D
Sbjct: 945 QKRIPRCYVEDTEAEKGREHVNPEYFPPASAVETEYNIMKFHSFSTNMAFNILNDTTA-T 1003
Query: 713 LDLPFEVTDEQLEMI-LFPKSS---FILGRSGTGKTTILTMKLFQK 754
++ PF V + + +I L P+ ++GRSGTGKTT +L++K
Sbjct: 1004 VEYPFRVGELEYAVIDLNPRPLEPIILIGRSGTGKTTCCLYRLWKK 1049
Score = 70 (29.7 bits), Expect = 4.8e-22, Sum P(6) = 4.8e-22
Identities = 25/91 (27%), Positives = 43/91 (47%)
Query: 794 LRQLFVTVSPKLCFAVKQHISQMISSAFGGKFVAESRLIDIDDAAEFKDIPN--SFADIP 851
L Q+FVT + LC V+++ ++ S K + + +D PN D+
Sbjct: 1146 LHQIFVTKNHVLCQEVQRNFIELSKST---KATSHYKPLD----------PNIHKLQDLR 1192
Query: 852 AESHPLVITFHKFLMMLDGTLGSSYFERFHD 882
E+ PL +T + L++LD +L +F R D
Sbjct: 1193 DENFPLFVTSKQLLLLLDASLPKPFFLRNED 1223
Score = 62 (26.9 bits), Expect = 6.5e-09, Sum P(6) = 6.5e-09
Identities = 35/152 (23%), Positives = 66/152 (43%)
Query: 1029 MEEFSKPMFDYWKKKSLVQVRQLDDSLAQAMQVASS-PEEWKSRGIKLFH--EHNYDMAT 1085
++E+ +F+ ++ + L S QA ++S+ PEE++ KL H E NY+
Sbjct: 2263 LKEYIHFLFENESARNRRESTDLWLSAMQAFLLSSNYPEEFE----KLLHQEEDNYNREL 2318
Query: 1086 ICFEKAKDSYWEGRSKATGLKATADRCRSSNPKQANVNLREAAKIFEAIGKADSAAKCFY 1145
E KD GR + + +K + P + + N+ + F I ++ FY
Sbjct: 2319 KALESEKDE--RGRGRGSRIKGIEGKFGMLAPNRDDENMDKTHLCF--IRLLENCIDQFY 2374
Query: 1146 ---NLGEYERAG----RIYLERREEPELEKAG 1170
N +Y+R + ++R +EP + G
Sbjct: 2375 VYRNPEDYKRLFFRFMNVLIKRCKEPLIPSIG 2406
Score = 60 (26.2 bits), Expect = 9.9e-09, Sum P(6) = 9.9e-09
Identities = 42/192 (21%), Positives = 78/192 (40%)
Query: 1149 EYERAGRIYLERREEPELEKAGECFFLAGCYKLAADVYAK-GKFFSECL----AVCSKG- 1202
EY + YLE +E P L +C A ++L+A + + GK + C K
Sbjct: 1756 EYLELAKTYLECKE-PTLSL--KCLSYAKEFQLSAQLCERLGKIRDAAYFYKRSQCYKDA 1812
Query: 1203 -KLFEIGLQYMNHWKQHADTDV-EHAGTDVGLLVRSMEINKIEQEFLEKCAIHYYGLQDK 1260
+ FE ++ K + ++ E A V ++ + L A +Y
Sbjct: 1813 FRCFEQIQEFDLALKMYCQEELFEEAAIAVEKYEEMLKTKTLPISKLSYSASQFY----L 1868
Query: 1261 KSMMKFVKSFRSVDLMRKFLKSLSCFDDLLVLEEESGNFMDAANIARLRGDIFLAVDLLQ 1320
++ K++ + + ++M L L D L+ L+ +AA++ G A L++
Sbjct: 1869 EAAAKYLSANKMKEMMA-VLSKLDIEDQLVFLKSRK-RLAEAADLLNREGRREEAALLMK 1926
Query: 1321 KAGCFKEACNVT 1332
+ GC EA +T
Sbjct: 1927 QHGCLLEAARLT 1938
Score = 46 (21.3 bits), Expect = 1.9e-16, Sum P(5) = 1.9e-16
Identities = 23/92 (25%), Positives = 35/92 (38%)
Query: 605 LEDVPKLVARLDNILAKYTD--EFINHCKEK-CIEGNLEVPKTWAATSKVVRFKNLADID 661
+E VPKLV L +I A + H + CI+ W K + D
Sbjct: 179 MEQVPKLVQWLISIGASVETIGPYPLHALMRLCIQARENHLFRWLMDHKPEWKGRINQKD 238
Query: 662 SDSESDLGGAASDSTSYVENSNVSDSLLLMKF 693
D + L A+ S Y+ D +L++F
Sbjct: 239 GDGCTVLHVVAAHSPGYLVKRQTEDVQMLLRF 270
Score = 38 (18.4 bits), Expect = 4.8e-22, Sum P(6) = 4.8e-22
Identities = 6/36 (16%), Positives = 20/36 (55%)
Query: 1808 KQSFGGVLEFIGTVVRQFLYNGKEVMEWIGKSHTNI 1843
++++ G E + +V + + ++ +W+ K+ T +
Sbjct: 2854 RKAWAGAEEAMTRLVNILILSVRDARDWLMKTETRL 2889
Score = 37 (18.1 bits), Expect = 4.8e-22, Sum P(6) = 4.8e-22
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 204 SLSSTLNDSQAQAVLSCLR 222
+L L +SQ + V++CL+
Sbjct: 455 ALPDGLQESQERPVVTCLK 473
>DICTYBASE|DDB_G0268660 [details] [associations]
symbol:DDB_G0268660 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268660
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 InterPro:IPR002058
ProtClustDB:CLSZ2429765 RefSeq:XP_646847.2
ProteinModelPortal:Q55F23 EnsemblProtists:DDB0304625 GeneID:8616530
KEGG:ddi:DDB_G0268660 InParanoid:Q55F23 Uniprot:Q55F23
Length = 2314
Score = 283 (104.7 bits), Expect = 5.7e-21, Sum P(4) = 5.7e-21
Identities = 66/172 (38%), Positives = 100/172 (58%)
Query: 258 ASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLP 317
A+++F T S+S + + +++DE+ Q E S IPL + I+ IL+GD QLP
Sbjct: 1510 ANIVFSTLSASGSGSVRSNFKANIVLVDESTQSSEPASLIPLCIGNIEKLILVGDPLQLP 1569
Query: 318 AMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNV 377
+ SS S E L SLFERLS + + +L+ QYRMHP+IS FP++ FY +++ D NV
Sbjct: 1570 PTIFSSGSAENGLNISLFERLSKVLPVE-MLNTQYRMHPTISRFPSNQFYKDRLLDGDNV 1628
Query: 378 KEKNYEKR-FLPGRMYGPYSFINVLDGREESIAHSYRNMVEVFVVMKILLNL 428
K Y + F YGP F +V+D +EES S +N +E+ +V ++ L
Sbjct: 1629 KSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKL 1680
Score = 84 (34.6 bits), Expect = 5.7e-21, Sum P(4) = 5.7e-21
Identities = 69/296 (23%), Positives = 124/296 (41%)
Query: 15 FESFVFPLL-EETRAQLSSSMEKISEAPFAQVVDLEDSKPYGAMLSDVKVDYWR--NRFS 71
F + + PL+ EE RAQL ++I ++ +D G L VK++ + F
Sbjct: 1190 FVNLMKPLIVEEYRAQLEGDFDEIEGISISE----QDGTLIG--LDRVKMNDTPTIHSFQ 1243
Query: 72 NYSKESYKVLPGDILVLADAKPETASDLR------RVGR-MWTFVSVTKVTEDKNESDTT 124
S++S ++ +I V + + +D+ + M+ VT+ +E K++
Sbjct: 1244 ELSEDSVEIT-FNIKVKDELEEIYLNDILLFKAFDHTNKPMFALSLVTRSSELKSKKQKI 1302
Query: 125 STSFKVKASKENQIDGANKSLFAIFLTNVTSNTRIWNSLHMSGNLKIIKELLCTDSVVKE 184
F + S + I+ +++ L + + I + + +S + I+EL T+
Sbjct: 1303 ICEFVLSDSTKPLIE----KFYSVSLNSKRYSKDILHFIKVSNSTTFIRELEATEEFKNS 1358
Query: 185 DCELCPVQSDG--IWNDIFG-----PSLSST-----LNDSQAQAVLSCLRRTHCDHKATV 232
L + ++N + PSL + LN SQ A+ + L K +
Sbjct: 1359 KTLLNQILQPSLEVYNLMTSMRMEIPSLLRSICIQELNASQFNAIETSLS------KKGI 1412
Query: 233 ELIWGPPGTGKTKTVSMLLDFCFT---KASLIFCTASSSYKLHRVAMEQLKFLVID 285
LI GPPGTGKT T+ LL K ++ C S + + VA LK +I+
Sbjct: 1413 TLIQGPPGTGKTTTIYYLLSILLAINPKFKILVCGPSHA-SVDEVAKRCLKKSLIN 1467
Score = 59 (25.8 bits), Expect = 1.9e-18, Sum P(4) = 1.9e-18
Identities = 38/161 (23%), Positives = 76/161 (47%)
Query: 107 TFVSVTKVTEDKNESDTTSTSFKVKASKENQIDGANKSLFAIFLTNVTSNTRIWNSLHMS 166
T + T + +DK + TT+T+ A+ + +KS A +N TS ++ S
Sbjct: 863 TASTTTSIIKDKATTKTTTTTTSTTANT-SATTSTDKSTTASSASNNTSAATTTFDINQS 921
Query: 167 ---GNLKII-KELLCTDSVVKEDCELC---PVQSDGIW--NDIFGPSLS---STLN--DS 212
LK+I ++ DS++K L P + I NDI S++ ST+N +
Sbjct: 922 LKHSLLKLIFEDSTSADSIIKTLDRLFKSYPSKKKSIEQVNDIINESITQFNSTINAIKN 981
Query: 213 QAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLLDF 253
+ + +S +++ + ++ +E I+ K+ ++ +LL+F
Sbjct: 982 RLKTDISKIQKNNTSNQ-NIEKIYN-----KSLSLMVLLEF 1016
Score = 52 (23.4 bits), Expect = 9.9e-18, Sum P(4) = 9.9e-18
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 112 TKVTEDKNESDTTSTSFKVKASKENQIDGANKSLFAIFLTNVTSNTRIWNS 162
TK T + + + TT+T+ + N + + + N+T N++I NS
Sbjct: 41 TKTTVESSTTSTTTTTSTTTTTNTNTNSTMDSIINNMNKLNITENSQIINS 91
Score = 50 (22.7 bits), Expect = 5.7e-21, Sum P(4) = 5.7e-21
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 458 LWILGNARTLTRKKSVWEALVHDANARQCFFNAEDEEDLGKAILGVKKELDEFDDLLNP- 516
L+++GN++ L +K W ++ N+ D K I +++++ E+D L NP
Sbjct: 1764 LFVIGNSKLL-KKDRTWGPFCQYVHS----INSMVSID-SKGISVLEQQIQEYDSL-NPN 1816
Query: 517 GSILFRS 523
G I F S
Sbjct: 1817 GLIEFHS 1823
Score = 44 (20.5 bits), Expect = 6.3e-17, Sum P(4) = 6.3e-17
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 128 FKVKASKENQIDGANKSLFAIFLTNVTSNTRIWNSLHMSGNLKI 171
FK+ +N+ D +L F+ ++ S + L +S + KI
Sbjct: 810 FKLPLGHKNESDNTIGTLIKSFIIHIKSLVLDYKDLSLSNSQKI 853
Score = 43 (20.2 bits), Expect = 5.7e-21, Sum P(4) = 5.7e-21
Identities = 25/98 (25%), Positives = 44/98 (44%)
Query: 1488 GSYGDFCLHYLGVWKQHSNLDTVYLLLNSDADWVRGLGNSYALWSWKLPSIDVHQLVSAG 1547
G + D C H + H++L LL + + L W S D++ +A
Sbjct: 2075 GIHFDMCFH--SMMSYHNSL-----LLGEYCSIDKRCRDLALLVKWWAVSKDLN---NAA 2124
Query: 1548 KNYWSSELLSVGMKVLYYLEALNKQSSTNSPSVFSQVL 1585
+ +SS L V M V+++L++LN N + +Q+L
Sbjct: 2125 EKTFSSFCL-VNM-VIHFLQSLNPPILPNLQTTSNQLL 2160
Score = 38 (18.4 bits), Expect = 9.4e-20, Sum P(4) = 9.4e-20
Identities = 13/62 (20%), Positives = 31/62 (50%)
Query: 1375 FYEFVCTEADILSNDQSDLSIINQQLNASTRHQSISGETLSVRQILDFHLKTDSSKYVWG 1434
F ++V + ++S D +S++ QQ+ ++L+ +++FH ++ +Y
Sbjct: 1782 FCQYVHSINSMVSIDSKGISVLEQQIQEY--------DSLNPNGLIEFHSDSED-EYDGK 1832
Query: 1435 DE 1436
DE
Sbjct: 1833 DE 1834
Score = 37 (18.1 bits), Expect = 1.2e-19, Sum P(4) = 1.2e-19
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 492 DEEDLGKAILGVKKELDEFDDL 513
DE+D I + +E ++ DDL
Sbjct: 1849 DEDDESNRIKKINQEGEDNDDL 1870
>SGD|S000004422 [details] [associations]
symbol:SEN1 "Presumed helicase and subunit of the Nrd1
complex (Nrd1p-Nab3p-Sen1p)" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043144
"snoRNA processing" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA;IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IMP;IDA] [GO:0031126 "snoRNA
3'-end processing" evidence=IMP] [GO:0006378 "mRNA polyadenylation"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA;IMP] [GO:0016180 "snRNA processing"
evidence=IEA;IMP] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0035649 "Nrd1 complex" evidence=IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0045005
"maintenance of fidelity involved in DNA-dependent DNA replication"
evidence=IMP] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
InterPro:IPR024714 SGD:S000004422 GO:GO:0005524 GO:GO:0005634
GO:GO:0019904 GO:GO:0006378 EMBL:BK006945 GO:GO:0008033
eggNOG:COG1112 EMBL:U20939 EMBL:U21094 GO:GO:0006364 GO:GO:0006369
GO:GO:0031126 GO:GO:0043141 KO:K00088 RefSeq:NP_013536.3
GeneID:851152 KEGG:sce:YLR432W GO:GO:0016180 KO:K10706
RefSeq:NP_013534.3 GeneID:851150 KEGG:sce:YLR430W GO:GO:0035649
GO:GO:0032575 InterPro:IPR024481 PANTHER:PTHR10887:SF164
Pfam:PF12726 EMBL:M74589 PIR:S53416 ProteinModelPortal:Q00416
SMR:Q00416 DIP:DIP-881N IntAct:Q00416 MINT:MINT-427565
STRING:Q00416 PaxDb:Q00416 PeptideAtlas:Q00416 EnsemblFungi:YLR430W
CYGD:YLR430w GeneTree:ENSGT00580000081652 HOGENOM:HOG000246755
OMA:SAIIPLR OrthoDB:EOG4MPMZ6 NextBio:967924 Genevestigator:Q00416
GermOnline:YLR430W Uniprot:Q00416
Length = 2231
Score = 254 (94.5 bits), Expect = 3.8e-20, Sum P(4) = 3.8e-20
Identities = 62/174 (35%), Positives = 96/174 (55%)
Query: 261 IFCTASSSYKLHRVAMEQLKF--LVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPA 318
I C+ S +A +KF ++IDEA Q E+ S IPL+ G + I++GD QLP
Sbjct: 1564 IICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQLPP 1622
Query: 319 MVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNVK 378
V S + +SLF R+ + +LL +QYRMHPSIS FP+S FY ++ D P +
Sbjct: 1623 TVLSGAASNFKYNQSLFVRMEK-NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMD 1681
Query: 379 EKNYEKRFLPGRMYGPYSFINVLDGREESIAH--SYRNMVEVFVVMKILLNLYK 430
N ++ + PY F +++ GR+E A SY NM E+ V ++++ L++
Sbjct: 1682 ILN-KRPWHQLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFR 1734
Score = 83 (34.3 bits), Expect = 3.8e-20, Sum P(4) = 3.8e-20
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 206 SSTLNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLLD-FCFTK 257
S LN SQA+A+++ + K LI GPPGTGKTKT+ ++ F TK
Sbjct: 1332 SYKLNTSQAEAIVNSVS------KEGFSLIQGPPGTGKTKTILGIIGYFLSTK 1378
Score = 73 (30.8 bits), Expect = 3.8e-20, Sum P(4) = 3.8e-20
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 458 LWILGNARTLTRKKSVWEALVHDANARQC 486
+W+LG+ R+L + K +W L+ DA R C
Sbjct: 1825 IWVLGHQRSLAKSK-LWRDLIEDAKDRSC 1852
Score = 49 (22.3 bits), Expect = 1.0e-16, Sum P(4) = 1.0e-16
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 203 PSLSSTLNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVS 248
PSLSST+ S A++ L+R KA I G P + K S
Sbjct: 954 PSLSSTIASSSAESRADYLQR-----KALSSSITGRPRVAQPKITS 994
Score = 48 (22.0 bits), Expect = 1.3e-17, Sum P(4) = 1.3e-17
Identities = 15/77 (19%), Positives = 35/77 (45%)
Query: 998 NEAKHNV-LCSELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKKKSLVQVRQLDDSLA 1056
++ K +V + +++ VA+TR + +W+ + +K W+ L++ + LA
Sbjct: 1799 DDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKL--WR--DLIEDAKDRSCLA 1854
Query: 1057 QAMQVASSPEEWKSRGI 1073
A P +++ I
Sbjct: 1855 YACSGFLDPRNNRAQSI 1871
Score = 45 (20.9 bits), Expect = 2.5e-17, Sum P(4) = 2.5e-17
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 1231 GLLVRSMEINKIE----QEFLEKCAIHYYGLQDKKSMMKFVKSFRSVDL 1275
G++ +S++ N I+ QE E I D KS + F+K FR +++
Sbjct: 1769 GMINKSIDFNTIDGFQGQE-KEIILISCVRADDTKSSVGFLKDFRRMNV 1816
Score = 42 (19.8 bits), Expect = 3.8e-20, Sum P(4) = 3.8e-20
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 22 LLEETRAQLSSSMEKISEAPFAQVVDLEDSKPYGAMLS 59
L EE + + ++ + +V+DL DS P LS
Sbjct: 916 LTEEVATEAENYRKEKELSRLGKVIDLTDSVPASPSLS 953
Score = 41 (19.5 bits), Expect = 8.8e-17, Sum P(3) = 8.8e-17
Identities = 28/125 (22%), Positives = 53/125 (42%)
Query: 31 SSSMEKISEAPFAQVVDLEDSKPYGAMLSDVKVDYWRNR-FSNYSKESYKVLPGDILVLA 89
S +K A+V L+++K G + DV + RN FS + ++ ++ +
Sbjct: 1233 SDDFKKAQHTCLAKVRTLKNTK--GGNV-DVTLRIHRNHSFSKFLTLRSEIYCVKVMQMT 1289
Query: 90 DAKPE--TASDLRR---VGRMWTFVSVTKVTEDKNESDTTSTSFKVKASK-ENQIDGANK 143
+ E T L VG++ V D E +T S+K+ S+ E ++ +K
Sbjct: 1290 TIEREYSTLEGLEYYDLVGQILQAKPSPPVNVDAAEIETVKKSYKLNTSQAEAIVNSVSK 1349
Query: 144 SLFAI 148
F++
Sbjct: 1350 EGFSL 1354
Score = 38 (18.4 bits), Expect = 9.6e-20, Sum P(4) = 9.6e-20
Identities = 19/77 (24%), Positives = 33/77 (42%)
Query: 23 LEETRAQLSSSMEKISEAPFAQVVD--LEDSKPYGAMLSDVKVDYWRNRFSNYSKESYKV 80
L E A+ +S ++ S Q L+ +K + L++ +V NY KE
Sbjct: 879 LVEMMAKYASKAKRFSNKLTEQQASEILQKAKIFNKALTE-EV---ATEAENYRKEKELS 934
Query: 81 LPGDILVLADAKPETAS 97
G ++ L D+ P + S
Sbjct: 935 RLGKVIDLTDSVPASPS 951
>DICTYBASE|DDB_G0268924 [details] [associations]
symbol:DDB_G0268924 "Helicase SEN1" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268924
GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112
ProtClustDB:CLSZ2429765 RefSeq:XP_646844.2
ProteinModelPortal:Q55F26 EnsemblProtists:DDB0202279 GeneID:8616527
KEGG:ddi:DDB_G0268924 InParanoid:Q55F26 Uniprot:Q55F26
Length = 1772
Score = 284 (105.0 bits), Expect = 5.7e-20, Sum P(3) = 5.7e-20
Identities = 66/173 (38%), Positives = 99/173 (57%)
Query: 257 KASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQL 316
+AS++F T S S + +++DE+ Q E S IPL + I+ IL+GD QL
Sbjct: 1357 RASIVFSTLSGSGSETVKNNFRADIILVDESTQSTEPSSIIPLCIGNIEKLILVGDPLQL 1416
Query: 317 PAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPN 376
P + S+ S E L SLFERLS + + +L +QYRMHP+IS FP++ FY +++ D N
Sbjct: 1417 PPTIFSTESAENGLNISLFERLSKVLPVE-MLHVQYRMHPTISRFPSNQFYRDRLLDGDN 1475
Query: 377 VKEKNYEKR-FLPGRMYGPYSFINVLDGREESIAHSYRNMVEVFVVMKILLNL 428
VK Y + F YGP F +V+D +EES S +N +E+ +V ++ L
Sbjct: 1476 VKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKL 1528
Score = 74 (31.1 bits), Expect = 5.7e-20, Sum P(3) = 5.7e-20
Identities = 59/273 (21%), Positives = 116/273 (42%)
Query: 1 VEQIPLSFQSVNRYFESFVFPLL-EETRAQLSSSMEKISEAPFAQ----VVDLEDSKPY- 54
+ + S+ + Y + + PL+ EE R QL+ ++I ++ ++ L+ K
Sbjct: 1018 IRNLKSSYSNHEEYMD-LMKPLIVEEYRKQLAGEFDEIEGVSISEKDGTLIGLDKIKMID 1076
Query: 55 GAMLSDVKV--DYWRNRFS-NYSKESYKVLPGDILVLADAKPETASDLRRVGRMWTFVSV 111
G + K DY +F + + S ++ D+L L T + +G + +V
Sbjct: 1077 GPTIHSFKEISDYSIMKFEIDVNDGSQELFYNDVL-LFKVFDNTNEPMFAMGLVLNCSNV 1135
Query: 112 -----TKVTEDK-NESDTTSTSFK----VKASKENQIDGAN---KSLFAIFLTNVTSNTR 158
T++ + K + SD+ + + + +N + +N + L+ I ++N + R
Sbjct: 1136 DLEENTQIVKCKFHSSDSMDPIIEMFDSISFNHKNYLKDSNTIKEKLYFIKVSNCITFIR 1195
Query: 159 IWNSLHMSGNLKIIKELLCTDSVVKEDCELCPVQSDGIWNDIFGPSLSSTLNDSQAQAVL 218
N++ N I+ + + S ++D ++ + I + LN SQ ++
Sbjct: 1196 ELNAIKDFRNSGILFDQILQPS--RKDHDILSSKRMAI-PSLLRSMCIQELNTSQFNSI- 1251
Query: 219 SCLRRTHCDHKATVELIWGPPGTGKTKTVSMLL 251
T K + LI GPPGTGKT T+ LL
Sbjct: 1252 ----ETSLSTKG-ITLIQGPPGTGKTTTIYYLL 1279
Score = 37 (18.1 bits), Expect = 5.7e-20, Sum P(3) = 5.7e-20
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 1375 FYEFVCTEADILSNDQSDLSIINQQL 1400
F ++V + ++S D +S++ QQ+
Sbjct: 1630 FCQYVHSINSMVSIDSKGISVLEQQI 1655
>CGD|CAL0003335 [details] [associations]
symbol:SEN1 species:5476 "Candida albicans" [GO:0035649 "Nrd1
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0016180 "snRNA processing" evidence=IEA] [GO:0031126 "snoRNA
3'-end processing" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
InterPro:IPR014016 InterPro:IPR024714 PROSITE:PS51198
CGD:CAL0003335 GO:GO:0005524 GO:GO:0005634 GO:GO:0008033
GO:GO:0004386 eggNOG:COG1112 EMBL:AACQ01000003 EMBL:AACQ01000004
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_723003.1 RefSeq:XP_723150.1 ProteinModelPortal:Q5ANG6
STRING:Q5ANG6 GeneID:3635255 GeneID:3635333 KEGG:cal:CaO19.13359
KEGG:cal:CaO19.5938 Uniprot:Q5ANG6
Length = 2018
Score = 211 (79.3 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 55/168 (32%), Positives = 89/168 (52%)
Query: 261 IFCTASSSYKLHRVAMEQLKF--LVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPA 318
+ C+ S VA ++F ++IDEA Q E+ + IPL+ G + I++GD QLP
Sbjct: 1515 VLCSTLSGSAHDLVANLSVQFDQVIIDEACQCLELSAIIPLRY-GCKKCIMVGDPNQLPP 1573
Query: 319 MVESSVSGEACLGRSLFERLS-NLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNV 377
V S + +SLF R+ N + ++L +QYRMHP IS FP+S FY++K+ D +
Sbjct: 1574 TVLSQAAASYNYEQSLFVRMQKNHPDSVYMLDVQYRMHPMISKFPSSEFYNSKLKDGDGM 1633
Query: 378 KEKNYEKRFLPGRMYGPYSFINVLDGREES-IAHSYRNMVEVFVVMKI 424
E N + + PY F ++L E++ + S N E V +++
Sbjct: 1634 LELN-TRPWHKDPPLTPYRFFDILGKHEKNELTRSLFNTDEAIVALQL 1680
Score = 107 (42.7 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 55/216 (25%), Positives = 93/216 (43%)
Query: 50 DSKPYGAML-SDVKVDYWRNRFSNYSK---ESYKVLPGDILVLA--DAKPETASDLRR-V 102
D KP+ ++ S VD + + F++ K + K+ D++VLA D + ASD+RR +
Sbjct: 1138 DEKPFELLIGSRTSVDGFFDVFASMEKTVLQDRKIGDSDLVVLALKDESLQHASDIRRYI 1197
Query: 103 GRMWTFVSVTKVTEDK-NESDTTSTSFKVKASKENQIDGANKSLFAIFLTNVTSNTRIWN 161
T + KV + K SD +V S + GA + V I
Sbjct: 1198 KADGTMTCLAKVQDTKYTNSDYCDVVLRVYPS--GPMMGALTPKSVVTGMKVMQMVTIER 1255
Query: 162 SLHMSGNLKIIKELLCTDSVVKEDCELCPVQSDGIWNDIFGPSLSSTLNDSQAQAVLSCL 221
+LK ++ DS++ P++ + D +NDSQA+A++
Sbjct: 1256 EF---SSLKGLQYYDLADSIISATPNK-PIEIEE--EDAKKMRKIYHVNDSQARAIMGTF 1309
Query: 222 RRTHCDHKATVELIWGPPGTGKTKTVSMLLDFCFTK 257
+ LI GPPGTGKTKT+ ++ + ++
Sbjct: 1310 K------SEGFSLIQGPPGTGKTKTILGIVGYSLSQ 1339
Score = 78 (32.5 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 458 LWILGNARTLTRKKSVWEALVHDANARQCFFNA 490
LWILGN +L+R + VW+ L+ DA R C A
Sbjct: 1775 LWILGNKDSLSRNE-VWKKLLTDAGERNCITQA 1806
Score = 68 (29.0 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 1000 AKHNV-LCSELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKK 1042
A NV S+++++ VA+TR + LWI N + S+ + WKK
Sbjct: 1751 ATGNVGFLSDVRRMNVALTRAKTTLWILGNKDSLSRN--EVWKK 1792
Score = 47 (21.6 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 34/140 (24%), Positives = 57/140 (40%)
Query: 75 KESYKVLPGDILVLADAKPETASDLRRVGRMWTFVSVTKVTEDKNESDTTSTSFKVKASK 134
K SY + G+I + D P S + + ++++ VS+ KV + K K
Sbjct: 517 KNSYLLSKGEIPNMFDTFPIFWSSILK-SKLYSNVSLVKVIIQCLR--LMPMAIKFNEIK 573
Query: 135 ENQIDGANKSLFAIFLTNVTSNTRIWNSLHMSGNLKIIKELLCTDSVVKE---DCELCPV 191
NQ ANK L + T + + N++ N LC +K+ D + C
Sbjct: 574 YNQ---ANKDLESA----KTQHNKSMNTICDLQNQIFSSFSLCDPENIKQIINDFD-C-- 623
Query: 192 QSDGIWNDIFGPSLSSTLND 211
++ +W IF P +S D
Sbjct: 624 -AESVWGCIFTPLISQAALD 642
Score = 41 (19.5 bits), Expect = 5.7e-13, Sum P(3) = 5.7e-13
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 115 TEDKNESDTTSTSFKVKASKENQIDGANKSLFAIFLTNV 153
+ED++++D T + KA K +I + +L I +N+
Sbjct: 1012 SEDESDTDLTDLFVEGKAKKIAKITEVDMNLKTIDRSNL 1050
Score = 38 (18.4 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 12/64 (18%), Positives = 28/64 (43%)
Query: 115 TEDKNESDTTSTSFKVKASKENQIDGANKSLFAIFLTNVTSNTRIWNSLHMSGNLKIIKE 174
TE E + T K++A + + + A K ++ + T+ N ++ + +
Sbjct: 1455 TESLEEKEITELEEKIRAINKKRSELAKKLDEQREKASIANRTKEINRRNIQARILSEAQ 1514
Query: 175 LLCT 178
+LC+
Sbjct: 1515 VLCS 1518
>DICTYBASE|DDB_G0268662 [details] [associations]
symbol:DDB_G0268662 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268662
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR002058 ProtClustDB:CLSZ2429765
RefSeq:XP_646848.1 ProteinModelPortal:Q55F22
EnsemblProtists:DDB0304624 GeneID:8616531 KEGG:ddi:DDB_G0268662
InParanoid:Q55F22 Uniprot:Q55F22
Length = 2523
Score = 283 (104.7 bits), Expect = 3.3e-19, Sum P(6) = 3.3e-19
Identities = 66/172 (38%), Positives = 100/172 (58%)
Query: 258 ASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLP 317
A++IF T S+S + + +++DE+ Q E S IPL + I+ IL+GD QLP
Sbjct: 1709 ATIIFATLSASGSKPIRSNFKANIVLVDESTQSSEPASLIPLCIGNIEKLILVGDPLQLP 1768
Query: 318 AMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNV 377
+ SS S + L SLFERLS + + +L+ QYRMHP+IS FP++ FY +++ D NV
Sbjct: 1769 PTIFSSESAKNGLNISLFERLSKVLPVE-MLNTQYRMHPTISRFPSNQFYKDRLLDGDNV 1827
Query: 378 KEKNYEKR-FLPGRMYGPYSFINVLDGREESIAHSYRNMVEVFVVMKILLNL 428
K Y + F YGP F +V+D +EES S +N +E+ +V ++ L
Sbjct: 1828 KSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKL 1879
Score = 77 (32.2 bits), Expect = 3.3e-19, Sum P(6) = 3.3e-19
Identities = 28/75 (37%), Positives = 34/75 (45%)
Query: 209 LNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLLDFCFT---KASLIFCTA 265
LN SQ AV T K + LI GPPGTGKT T+ LL K ++ C
Sbjct: 1594 LNTSQFSAV-----ETSLSTKG-ITLIQGPPGTGKTTTIYYLLSILLAINPKFKILVCGP 1647
Query: 266 SSSYKLHRVAMEQLK 280
S + + VA LK
Sbjct: 1648 SHA-SVDEVAKRCLK 1661
Score = 50 (22.7 bits), Expect = 3.3e-19, Sum P(6) = 3.3e-19
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 458 LWILGNARTLTRKKSVWEALVHDANARQCFFNAEDEEDLGKAILGVKKELDEFDDLLNP- 516
L+++GN++ L +K W ++ N+ D K I +++++ E+D L NP
Sbjct: 1963 LFVIGNSKLL-KKDRTWGPFCQYVHS----INSMVSID-SKGISVLEQQIQEYDSL-NPN 2015
Query: 517 GSILFRS 523
G I F S
Sbjct: 2016 GLIEFHS 2022
Score = 46 (21.3 bits), Expect = 3.3e-19, Sum P(6) = 3.3e-19
Identities = 15/59 (25%), Positives = 23/59 (38%)
Query: 113 KVTEDKNESDTTSTSFKVKASKENQIDGANKSLFAIFLTNVTSNTRIWNSLHMSGNLKI 171
K K E FK+ +NQ D +L F+ + S + L +S + KI
Sbjct: 1005 KSKSKKTEYTMNVELFKLPLGHKNQSDNTIGTLIKSFIIYIKSLVLDYKDLSLSNSQKI 1063
Score = 43 (20.2 bits), Expect = 3.3e-19, Sum P(6) = 3.3e-19
Identities = 12/55 (21%), Positives = 31/55 (56%)
Query: 586 DIVKESQYFQ--VLKVWDILPLEDVPKLVARLDNILAKYTDEFIN--HCKEKCIE 636
+ +K S++ + KV + L ++++ + ++ + + K +E I+ CK+K I+
Sbjct: 2143 NFIKHSRFLDPYLKKVLNNLEIQEISQSLSSSSSNINKSLNEIISKIECKKKSIK 2197
Score = 40 (19.1 bits), Expect = 3.3e-19, Sum P(6) = 3.3e-19
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 1530 LWSWKLPSIDVHQLVSAGKNYWSSELLSVGMKVLYYLEALNKQSSTNSPSVFSQVL 1585
L W S D++ +A + +SS L V M V+++L++LN N + +Q+L
Sbjct: 2319 LVKWWAVSKDLN---NAAEKTFSSFCL-VNM-VIHFLQSLNPPILPNLQTTSNQLL 2369
Score = 37 (18.1 bits), Expect = 3.0e-18, Sum P(5) = 3.0e-18
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 1375 FYEFVCTEADILSNDQSDLSIINQQL 1400
F ++V + ++S D +S++ QQ+
Sbjct: 1981 FCQYVHSINSMVSIDSKGISVLEQQI 2006
>DICTYBASE|DDB_G0285243 [details] [associations]
symbol:DDB_G0285243 "putative splicing endonuclease"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0285243 EMBL:AAFI02000076 KO:K10706
InterPro:IPR024481 Pfam:PF12726 RefSeq:XP_002649136.1
ProteinModelPortal:C7G036 EnsemblProtists:DDB0252844 GeneID:8625002
KEGG:ddi:DDB_G0285243 OMA:DSINMIF Uniprot:C7G036
Length = 2069
Score = 237 (88.5 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 64/183 (34%), Positives = 92/183 (50%)
Query: 257 KASLIFCTASSS-YKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQ 315
++ +I T S S Y A + +++DEAAQ E+ + IPL+ ++ IL+GD Q
Sbjct: 1584 RSQIILSTLSGSGYDYLFTATKNFDLVIVDEAAQAVELSTLIPLR-HDVKKCILVGDPQQ 1642
Query: 316 LPAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSP 375
LP S V+ + SLF+RL N G A +L QYRMHP IS FP+ FY ++ D
Sbjct: 1643 LPPTTISKVATKFQYEISLFQRLMNCGMAPTVLKTQYRMHPMISKFPSKIFYRGELEDGK 1702
Query: 376 NVKEKNYEKRFLPGRMYGPYSFINVLD--GREESIAHSYRNMVEVFVVMKILLNLYKVHN 433
NV+E + +GP F ++ D G S S RN EV + I+ L + N
Sbjct: 1703 NVREYKQDYYNDSASRFGPLVFYDLFDKHGEVRSSFFSLRNPTEVKLAKLIVDQL--ISN 1760
Query: 434 VSN 436
N
Sbjct: 1761 YPN 1763
Score = 101 (40.6 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 32/107 (29%), Positives = 54/107 (50%)
Query: 150 LTNVTSNTRIWNSLHMSGNLKIIKELLCTDSVVKEDCELCPVQSDGIWNDIFGPSLSSTL 209
+T++++ +R + +LHM G + + ++ + + I + +F L S+L
Sbjct: 1316 VTSLSTISREYMALHMVGKIPLGTSIISPHLYINSNDSSSSTFK--IPDKLF-QKLRSSL 1372
Query: 210 NDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLLDFCFT 256
N+SQ A+ S L+ L+ GPPGTGKTKT+ LL FT
Sbjct: 1373 NESQLSAIASTLKNL-----GGFSLLQGPPGTGKTKTILSLLSV-FT 1413
Score = 47 (21.6 bits), Expect = 9.2e-14, Sum P(2) = 9.2e-14
Identities = 44/215 (20%), Positives = 80/215 (37%)
Query: 1 VEQIPLSFQSVNRYFESFVFPLLEETRAQLSSSMEKISEAPFAQVVDLEDSKPYGAMLSD 60
++ +P +F + Y + F L+EE RAQ+ + + E Q V +++ +
Sbjct: 1157 LKPVPGTFDDLKHYIDIFQPLLIEEFRAQV---IRNLDEGVNFQDVTVDNFIQENGFID- 1212
Query: 61 VKVDYWRNRFSNYSKESYKVLPGDILVLADAKPETASDLRRVGRMWTFVSVTKVTEDKNE 120
VD F KE+ +L +LV+ P S L R S E K+
Sbjct: 1213 --VD-----FELPPKENDILLDDFVLVIQP--PRNGSPLNEAYRDPNLFSAFGKVERKDR 1263
Query: 121 SDTTSTSFKVKASKENQIDGANKS-LFAIFLTNVTSNTRIWNSLHMSGNLKIIKELLCTD 179
K + G + + + +S+T + + GN+ I+++
Sbjct: 1264 --IIPKGGKGNFDQNGGGGGGGRGFIIKVRFYKASSSTFV-QQICKIGNIWNIQKVTSLS 1320
Query: 180 SVVKEDCELCPVQSDGIWNDIFGPSLSSTLNDSQA 214
++ +E L V + I P L NDS +
Sbjct: 1321 TISREYMALHMVGKIPLGTSIISPHLYINSNDSSS 1355
Score = 38 (18.4 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 70 FSNYSKESYKVLPGDILVLADAKPETASDLRRVGRMWTFVSVTKVTEDKNESDTTSTSFK 129
FS++ + +V PGD V+ D D + + T S+ V+ ++ S ++ +
Sbjct: 548 FSDFPPFALQVKPGDSSVVLDVL-----DNEQFHK--TIFSLL-VSPNQKISTSSKKMLQ 599
Query: 130 VKASKENQIDGANK 143
K KEN I A K
Sbjct: 600 KKYPKENTITQAFK 613
>DICTYBASE|DDB_G0268914 [details] [associations]
symbol:DDB_G0268914 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
SMART:SM00382 dictyBase:DDB_G0268914 GO:GO:0005524
EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112 RefSeq:XP_647058.1
ProteinModelPortal:Q55EG2 EnsemblProtists:DDB0190122 GeneID:8616757
KEGG:ddi:DDB_G0268914 InParanoid:Q55EG2 OMA:ANCRVEN Uniprot:Q55EG2
Length = 4540
Score = 255 (94.8 bits), Expect = 1.6e-17, Sum P(5) = 1.6e-17
Identities = 66/178 (37%), Positives = 95/178 (53%)
Query: 258 ASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKL--PGIQHAILIGDECQ 315
+S+ F T S+S + + +++DEA Q E IPL L ++ IL+GD Q
Sbjct: 3672 SSICFSTLSASGSNLVQSSFKPNVVIVDEATQSCETSCIIPLSLGAKSMKKLILVGDPVQ 3731
Query: 316 LPAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSP 375
LP + S S LG SLFERLS + +L++QYRMHP IS FP+S FY + + D
Sbjct: 3732 LPPTIFSKESIHCGLGISLFERLSKVLPVS-MLNVQYRMHPLISKFPSSQFYHDILKDGD 3790
Query: 376 NVKEKN-YEKRFLPGRMYGPYSFINVLDGREESIAHSYRNMVEVFVVMKILLNLYKVH 432
NV + Y RF + YG F +V D REE S +N +E+ +V ++ L + H
Sbjct: 3791 NVVSSDAYSLRFHENQDYGAIRFFDVTDSREERGKTSIKNQLEITMVFTLIKKLTQDH 3848
Score = 84 (34.6 bits), Expect = 1.6e-17, Sum P(5) = 1.6e-17
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 206 SSTLNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLL 251
+ TLN+SQ A+ L H +++ LI GPPGTGKT T++ L+
Sbjct: 3553 NQTLNESQLAAINESL--VH----SSITLIQGPPGTGKTHTITSLI 3592
Score = 56 (24.8 bits), Expect = 2.3e-13, Sum P(5) = 2.3e-13
Identities = 37/126 (29%), Positives = 52/126 (41%)
Query: 161 NSLHMSGNLKIIKELL--CTD-SVVKEDCELCPVQSDGIWN--DIFGPSLSSTLNDSQAQ 215
NSLH S + I+KE TD S + L + N + L DS +Q
Sbjct: 2275 NSLHSSNSCGILKEAFRDTTDISTIVAAINLLITRFPEHENRLQLVSSILIGGTQDSFSQ 2334
Query: 216 AVLSCLRRTHCD-HKATVELIWGPPG----TGKTKTVSMLLDFC-FTKASLI--FCTASS 267
V + +TH D + VE + P G T + +LLDF FT+ S + + T
Sbjct: 2335 KVQTNRAKTHRDLQRIIVEDV-NPIGFLEITNLCNSARILLDFSNFTQRSALKSYSTKDK 2393
Query: 268 SYKLHR 273
S L R
Sbjct: 2394 SSTLKR 2399
Score = 52 (23.4 bits), Expect = 1.6e-17, Sum P(5) = 1.6e-17
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 443 KKCINVKYFFLSMHCLWILGNARTLTRKKSVWEALV-HDANARQCF-FNAEDEEDLGKAI 500
++ INV + + L+I+GNA TL + W L+ H + + + N+ D E+L
Sbjct: 3914 RRRINVS-ITRAKYGLFIIGNA-TLLKLDRTWGELIDHLISIDRVYSINSNDIENL---- 3967
Query: 501 LGVKKELDEFDDLLNPGSIL 520
+++ +FD L+NP ++
Sbjct: 3968 ---REQTIQFD-LINPQGLI 3983
Score = 51 (23.0 bits), Expect = 1.6e-17, Sum P(5) = 1.6e-17
Identities = 25/109 (22%), Positives = 55/109 (50%)
Query: 64 DYWRNRFSNYSKE-SYKVL-PGDILVLADAKPETASDLRRVGRMWTFVSVTKVTEDKNES 121
D+ ++F+ Y+KE +Y+ +I + P+T D+ + R +F + + + K ++
Sbjct: 2669 DFSNHKFTEYTKEFNYRRSGKTNISIPTLTLPKTHEDVSLISRS-SFNEIYLLIK-KYQN 2726
Query: 122 DTTSTSFKVKAS--KENQIDGANKSLFAIFLTNVTSNTRIWNSLHMSGN 168
D +S S + S +EN I+ + I +N ++N + N+ + + N
Sbjct: 2727 DYSSYSILSRNSLNRENIINKKENNREIINNSNNSNNNKNNNNNNNNNN 2775
Score = 48 (22.0 bits), Expect = 1.6e-17, Sum P(5) = 1.6e-17
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 585 IDIVKESQYFQ-VLKVWDILPLEDVPKLVARLDNILAKYTDEFIN 628
IDI S+ Q VL +IL +D PK++ + L + FI+
Sbjct: 4114 IDINLISENIQKVLNNQEILTNQDYPKILLEIIQELQSFNKSFIS 4158
Score = 41 (19.5 bits), Expect = 8.0e-17, Sum P(5) = 8.0e-17
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 1229 DVGLLVRSMEINKI--EQEFLEKCAIHYYGLQDKKSMMKFVKSFRSVDLM--RKFLKSLS 1284
D+ L+ S I K+ QE L L+ + + F KSF S ++ +K L+
Sbjct: 4115 DINLI--SENIQKVLNNQEILTNQDYPKILLEIIQELQSFNKSFISSTVLANKKLLRD-- 4170
Query: 1285 CFDDLLV 1291
CF++ L+
Sbjct: 4171 CFNNYLI 4177
Score = 39 (18.8 bits), Expect = 3.2e-16, Sum P(5) = 3.2e-16
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 487 FFNAEDEEDL 496
F N ED+EDL
Sbjct: 4005 FLNKEDDEDL 4014
Score = 38 (18.4 bits), Expect = 3.2e-16, Sum P(5) = 3.2e-16
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 119 NESDTTSTSFKVKASKENQIDGANKSLFAIFLTNVTSNT 157
N +D + + +SK+N +G N+S+ T TS +
Sbjct: 3118 NHNDNSKNNNN--SSKKNNKNGDNESITTKSTTTSTSTS 3154
Score = 38 (18.4 bits), Expect = 3.1e-15, Sum P(5) = 3.1e-15
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 511 DDLLNPGSILFRSQRWKVNFSEN 533
D+ LN G +LF+ ++ F+ N
Sbjct: 4436 DNRLNIGQLLFKFFQYYCTFNYN 4458
Score = 37 (18.1 bits), Expect = 4.0e-16, Sum P(5) = 4.0e-16
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 107 TFVSVTKVTEDKNESDTTSTSFKVKASKENQ 137
T + T ++ N+S +S S K K S +++
Sbjct: 1970 TTTTTTTPSQISNQSLLSSISLKTKLSLDHE 2000
>ZFIN|ZDB-GENE-070402-1 [details] [associations]
symbol:setx "senataxin" species:7955 "Danio rerio"
[GO:0006302 "double-strand break repair" evidence=IEA]
InterPro:IPR026121 ZFIN:ZDB-GENE-070402-1 GO:GO:0006302
InterPro:IPR024481 Pfam:PF12726 GeneTree:ENSGT00580000081652
PANTHER:PTHR10887:SF15 EMBL:CU927918 IPI:IPI00481119
Ensembl:ENSDART00000082314 Ensembl:ENSDART00000149777
Uniprot:E7FBJ2
Length = 2368
Score = 207 (77.9 bits), Expect = 1.8e-16, Sum P(4) = 1.8e-16
Identities = 65/184 (35%), Positives = 93/184 (50%)
Query: 258 ASLIFCTASSSYKL------HRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIG 311
A +I CT S+S + R+ E ++IDEA+Q KE E+ IP+ L IL+G
Sbjct: 1928 AHVICCTLSTSGSIVLENAFRRLGHEPFSCVIIDEASQAKETETLIPM-LYRCPSVILVG 1986
Query: 312 DECQLPAMVESSVSGEACLGRSLFERL-SNLGQAKH------LLSIQYRMHPSISSFPNS 364
D QLP V S + E +SL RL +L + LLS+QYRMHP I FP+
Sbjct: 1987 DPNQLPPTVVSQKAKEFGFDQSLMARLCKSLHPSNSKLPPILLLSMQYRMHPDICEFPSK 2046
Query: 365 YFYDNKIFDSPNVKEKNYEKRFLPGRMYGPYSFINVLDGREESIAHSYRNMVEVFVVMKI 424
Y Y++ + + +K + P + PY +V+DGRE S+ N EV +V +
Sbjct: 2047 YIYNSALKNDCETAQKRCSLSW-P---FKPYKVFDVMDGRETKERDSFINHKEVSLV-GL 2101
Query: 425 LLNL 428
LL L
Sbjct: 2102 LLKL 2105
Score = 85 (35.0 bits), Expect = 1.8e-16, Sum P(4) = 1.8e-16
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 458 LWILGNARTLTRKKSVWEALVHDANARQCFFNAED---EEDLGKAI 500
L+ILG+ RTL R++S W AL+ DA R+C N E D+ K +
Sbjct: 2192 LFILGHLRTL-REQSDWGALIEDAGRRECIINTMQKNFESDVKKIV 2236
Score = 80 (33.2 bits), Expect = 1.8e-16, Sum P(4) = 1.8e-16
Identities = 23/53 (43%), Positives = 29/53 (54%)
Query: 202 GPS-LSST-LNDSQAQAVLSCLRRTHCDHKAT-VELIWGPPGTGKTKTVSMLL 251
GPS L + N QA+A+ + H K LI GPPGTGK+KT+ LL
Sbjct: 1706 GPSDLDAPEFNRDQARAIACGIAMIHRKQKTPKFLLIHGPPGTGKSKTIGGLL 1758
Score = 46 (21.3 bits), Expect = 1.8e-16, Sum P(4) = 1.8e-16
Identities = 8/23 (34%), Positives = 17/23 (73%)
Query: 1 VEQIPLSFQSVNRYFESFVFPLL 23
++++P++F S YF + ++PLL
Sbjct: 1520 LKEVPVNFSSYLEYFNT-LYPLL 1541
>MGI|MGI:107995 [details] [associations]
symbol:Upf1 "UPF1 regulator of nonsense transcripts homolog
(yeast)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=ISO]
[GO:0000785 "chromatin" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006260 "DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006449 "regulation of
translational termination" evidence=ISO] [GO:0007049 "cell cycle"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=ISO] [GO:0044530
"supraspliceosomal complex" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=ISO] InterPro:IPR018999 Pfam:PF09416 MGI:MGI:107995
GO:GO:0005524 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 GO:GO:0000785
GO:GO:0003682 GO:GO:0003723 GO:GO:0007049 GO:GO:0000932
eggNOG:COG1112 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GO:GO:0006449 GeneTree:ENSGT00550000074391
HOGENOM:HOG000205990 KO:K14326 OMA:MFYEGSL CTD:5976
HOVERGEN:HBG061556 ChiTaRS:UPF1 EMBL:AF322655 EMBL:AY597039
EMBL:AY597038 EMBL:AK148196 EMBL:BC030916 EMBL:BC052149
EMBL:BC056442 EMBL:AF182947 IPI:IPI00420949 IPI:IPI00850525
RefSeq:NP_001116301.1 RefSeq:NP_109605.2 UniGene:Mm.390048
ProteinModelPortal:Q9EPU0 SMR:Q9EPU0 STRING:Q9EPU0
PhosphoSite:Q9EPU0 PaxDb:Q9EPU0 PRIDE:Q9EPU0
Ensembl:ENSMUST00000075666 GeneID:19704 KEGG:mmu:19704
UCSC:uc009mab.2 UCSC:uc012gfa.1 InParanoid:Q9EPU0 OrthoDB:EOG4P8FH8
NextBio:297078 Bgee:Q9EPU0 Genevestigator:Q9EPU0
GermOnline:ENSMUSG00000058301 Uniprot:Q9EPU0
Length = 1124
Score = 226 (84.6 bits), Expect = 9.3e-16, Sum P(3) = 9.3e-16
Identities = 63/176 (35%), Positives = 91/176 (51%)
Query: 258 ASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLP 317
A +I CT + R+A Q + ++IDE+ Q E E +P+ L G + IL+GD CQL
Sbjct: 616 ADVICCTCVGAGD-PRLAKMQFRSILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLG 673
Query: 318 AMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNV 377
+V + +A L +SLFERL LG L +QYRMHP++S+FP++ FY+ + +
Sbjct: 674 PVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTA 733
Query: 378 KEKNYEKRF-LPGRMYGPYSFINVLDGREE--SIAHSYRNMVEVFVVMKILLNLYK 430
++ +K F F V G+EE S SY N E V KI L K
Sbjct: 734 ADR-VKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLK 788
Score = 69 (29.3 bits), Expect = 9.3e-16, Sum P(3) = 9.3e-16
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 209 LNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLL 251
LN SQ AV + L+R + LI GPPGTGKT T + ++
Sbjct: 477 LNHSQVYAVKTVLQRP-------LSLIQGPPGTGKTVTSATIV 512
Score = 53 (23.7 bits), Expect = 9.3e-16, Sum P(3) = 9.3e-16
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 998 NEAKHNVLCSELKQLYVAITRTRQRLWIWENMEEFSK-PMFD----YWKK-KSLVQ--VR 1049
NE + ++ ++L VA+TR R + I N + SK P+++ Y+K+ K+LV+ +
Sbjct: 851 NEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALVEGPLN 910
Query: 1050 QLDDSLAQ 1057
L +SL Q
Sbjct: 911 NLRESLMQ 918
>UNIPROTKB|E1C0J4 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0003677 GO:GO:0008270 GO:GO:0004386
GeneTree:ENSGT00550000074391 EMBL:AADN02071779 IPI:IPI00598917
Ensembl:ENSGALT00000005099 NextBio:20823079 ArrayExpress:E1C0J4
Uniprot:E1C0J4
Length = 1117
Score = 226 (84.6 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 63/176 (35%), Positives = 91/176 (51%)
Query: 258 ASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLP 317
A +I CT + R+A Q + ++IDE+ Q E E +P+ L G + IL+GD CQL
Sbjct: 609 ADVICCTCVGAGD-PRLAKMQFRSILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLG 666
Query: 318 AMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNV 377
+V + +A L +SLFERL LG L +QYRMHP++S+FP++ FY+ + +
Sbjct: 667 PVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTA 726
Query: 378 KEKNYEKRF-LPGRMYGPYSFINVLDGREE--SIAHSYRNMVEVFVVMKILLNLYK 430
++ +K F F V G+EE S SY N E V KI L K
Sbjct: 727 ADR-VKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLK 781
Score = 69 (29.3 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 209 LNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLL 251
LN SQ AV + L+R + LI GPPGTGKT T + ++
Sbjct: 470 LNHSQVYAVKTVLQRP-------LSLIQGPPGTGKTVTSATIV 505
Score = 50 (22.7 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 998 NEAKHNVLCSELKQLYVAITRTRQRLWIWENMEEFSK-PMFD----YWKK-KSLVQ--VR 1049
NE + ++ ++L VA+TR R + I N + SK P+++ Y+K+ K LV+ +
Sbjct: 844 NEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLN 903
Query: 1050 QLDDSLAQ 1057
L +SL Q
Sbjct: 904 NLRESLMQ 911
>UNIPROTKB|E1BEK9 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0044530 "supraspliceosomal complex" evidence=IEA] [GO:0035145
"exon-exon junction complex" evidence=IEA] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] InterPro:IPR018999
Pfam:PF09416 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0007049 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145
GeneTree:ENSGT00550000074391 OMA:MFYEGSL EMBL:DAAA02019036
IPI:IPI00685259 Ensembl:ENSBTAT00000027868 Uniprot:E1BEK9
Length = 1127
Score = 226 (84.6 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 63/176 (35%), Positives = 91/176 (51%)
Query: 258 ASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLP 317
A +I CT + R+A Q + ++IDE+ Q E E +P+ L G + IL+GD CQL
Sbjct: 619 ADVICCTCVGAGD-PRLAKMQFRSILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLG 676
Query: 318 AMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNV 377
+V + +A L +SLFERL LG L +QYRMHP++S+FP++ FY+ + +
Sbjct: 677 PVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTA 736
Query: 378 KEKNYEKRF-LPGRMYGPYSFINVLDGREE--SIAHSYRNMVEVFVVMKILLNLYK 430
++ +K F F V G+EE S SY N E V KI L K
Sbjct: 737 ADR-VKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLK 791
Score = 69 (29.3 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 209 LNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLL 251
LN SQ AV + L+R + LI GPPGTGKT T + ++
Sbjct: 480 LNHSQVYAVKTVLQRP-------LSLIQGPPGTGKTVTSATIV 515
Score = 50 (22.7 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 998 NEAKHNVLCSELKQLYVAITRTRQRLWIWENMEEFSK-PMFD----YWKK-KSLVQ--VR 1049
NE + ++ ++L VA+TR R + I N + SK P+++ Y+K+ K LV+ +
Sbjct: 854 NEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLN 913
Query: 1050 QLDDSLAQ 1057
L +SL Q
Sbjct: 914 NLRESLMQ 921
>UNIPROTKB|E1C0J3 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0035145 "exon-exon
junction complex" evidence=IEA] [GO:0044530 "supraspliceosomal
complex" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AADN02071779 IPI:IPI00571950 Ensembl:ENSGALT00000005101
ArrayExpress:E1C0J3 Uniprot:E1C0J3
Length = 1128
Score = 226 (84.6 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 63/176 (35%), Positives = 91/176 (51%)
Query: 258 ASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLP 317
A +I CT + R+A Q + ++IDE+ Q E E +P+ L G + IL+GD CQL
Sbjct: 620 ADVICCTCVGAGD-PRLAKMQFRSILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLG 677
Query: 318 AMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNV 377
+V + +A L +SLFERL LG L +QYRMHP++S+FP++ FY+ + +
Sbjct: 678 PVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTA 737
Query: 378 KEKNYEKRF-LPGRMYGPYSFINVLDGREE--SIAHSYRNMVEVFVVMKILLNLYK 430
++ +K F F V G+EE S SY N E V KI L K
Sbjct: 738 ADR-VKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLK 792
Score = 69 (29.3 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 209 LNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLL 251
LN SQ AV + L+R + LI GPPGTGKT T + ++
Sbjct: 481 LNHSQVYAVKTVLQRP-------LSLIQGPPGTGKTVTSATIV 516
Score = 50 (22.7 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 998 NEAKHNVLCSELKQLYVAITRTRQRLWIWENMEEFSK-PMFD----YWKK-KSLVQ--VR 1049
NE + ++ ++L VA+TR R + I N + SK P+++ Y+K+ K LV+ +
Sbjct: 855 NEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLN 914
Query: 1050 QLDDSLAQ 1057
L +SL Q
Sbjct: 915 NLRESLMQ 922
>UNIPROTKB|Q92900 [details] [associations]
symbol:UPF1 "Regulator of nonsense transcripts 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay"
evidence=IDA;NAS;IMP;TAS] [GO:0006449 "regulation of translational
termination" evidence=IMP;NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0003723 "RNA binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=NAS] [GO:0071044 "histone mRNA catabolic
process" evidence=IMP] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0044530 "supraspliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006260 "DNA replication" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0007049 "cell cycle" evidence=IMP] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005524 GO:GO:0010467 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0003723 GO:GO:0007049
GO:GO:0006406 GO:GO:0000932 eggNOG:COG1112 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145 EMBL:AC003972
GO:GO:0044530 GO:GO:0006449 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL CTD:5976 EMBL:U65533 EMBL:U59323 EMBL:D86988
EMBL:AF074016 EMBL:BC039817 IPI:IPI00034049 IPI:IPI00399170
RefSeq:NP_002902.2 UniGene:Hs.515266 PDB:2GJK PDB:2GK6 PDB:2GK7
PDB:2IYK PDB:2WJV PDB:2WJY PDB:2XZO PDB:2XZP PDBsum:2GJK
PDBsum:2GK6 PDBsum:2GK7 PDBsum:2IYK PDBsum:2WJV PDBsum:2WJY
PDBsum:2XZO PDBsum:2XZP ProteinModelPortal:Q92900 SMR:Q92900
DIP:DIP-29875N IntAct:Q92900 MINT:MINT-5005507 STRING:Q92900
PhosphoSite:Q92900 DMDM:17380291 PaxDb:Q92900 PRIDE:Q92900
Ensembl:ENST00000262803 GeneID:5976 KEGG:hsa:5976 UCSC:uc002nkf.3
UCSC:uc002nkg.3 GeneCards:GC19P018942 HGNC:HGNC:9962 HPA:HPA019587
HPA:HPA020857 MIM:601430 neXtProt:NX_Q92900 PharmGKB:PA34328
HOVERGEN:HBG061556 InParanoid:Q92900 ChiTaRS:UPF1
EvolutionaryTrace:Q92900 GenomeRNAi:5976 NextBio:23259
ArrayExpress:Q92900 Bgee:Q92900 CleanEx:HS_UPF1
Genevestigator:Q92900 GermOnline:ENSG00000005007 Uniprot:Q92900
Length = 1129
Score = 226 (84.6 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 63/176 (35%), Positives = 91/176 (51%)
Query: 258 ASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLP 317
A +I CT + R+A Q + ++IDE+ Q E E +P+ L G + IL+GD CQL
Sbjct: 621 ADVICCTCVGAGD-PRLAKMQFRSILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLG 678
Query: 318 AMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNV 377
+V + +A L +SLFERL LG L +QYRMHP++S+FP++ FY+ + +
Sbjct: 679 PVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTA 738
Query: 378 KEKNYEKRF-LPGRMYGPYSFINVLDGREE--SIAHSYRNMVEVFVVMKILLNLYK 430
++ +K F F V G+EE S SY N E V KI L K
Sbjct: 739 ADR-VKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLK 793
Score = 69 (29.3 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 209 LNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLL 251
LN SQ AV + L+R + LI GPPGTGKT T + ++
Sbjct: 482 LNHSQVYAVKTVLQRP-------LSLIQGPPGTGKTVTSATIV 517
Score = 50 (22.7 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 998 NEAKHNVLCSELKQLYVAITRTRQRLWIWENMEEFSK-PMFD----YWKK-KSLVQ--VR 1049
NE + ++ ++L VA+TR R + I N + SK P+++ Y+K+ K LV+ +
Sbjct: 856 NEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLN 915
Query: 1050 QLDDSLAQ 1057
L +SL Q
Sbjct: 916 NLRESLMQ 923
>UNIPROTKB|E2RL81 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AAEX03012279 Ensembl:ENSCAFT00000023180 Uniprot:E2RL81
Length = 1130
Score = 226 (84.6 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 63/176 (35%), Positives = 91/176 (51%)
Query: 258 ASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLP 317
A +I CT + R+A Q + ++IDE+ Q E E +P+ L G + IL+GD CQL
Sbjct: 622 ADVICCTCVGAGD-PRLAKMQFRSILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLG 679
Query: 318 AMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNV 377
+V + +A L +SLFERL LG L +QYRMHP++S+FP++ FY+ + +
Sbjct: 680 PVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTA 739
Query: 378 KEKNYEKRF-LPGRMYGPYSFINVLDGREE--SIAHSYRNMVEVFVVMKILLNLYK 430
++ +K F F V G+EE S SY N E V KI L K
Sbjct: 740 ADR-VKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLK 794
Score = 69 (29.3 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 209 LNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLL 251
LN SQ AV + L+R + LI GPPGTGKT T + ++
Sbjct: 483 LNHSQVYAVKTVLQRP-------LSLIQGPPGTGKTVTSATIV 518
Score = 50 (22.7 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 998 NEAKHNVLCSELKQLYVAITRTRQRLWIWENMEEFSK-PMFD----YWKK-KSLVQ--VR 1049
NE + ++ ++L VA+TR R + I N + SK P+++ Y+K+ K LV+ +
Sbjct: 857 NEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLN 916
Query: 1050 QLDDSLAQ 1057
L +SL Q
Sbjct: 917 NLRESLMQ 924
>TAIR|locus:2171007 [details] [associations]
symbol:LBA1 "LOW-LEVEL BETA-AMYLASE 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0016246 "RNA interference" evidence=IGI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA;RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0009755 "hormone-mediated
signaling pathway" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0009744 "response to sucrose stimulus"
evidence=IGI] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016246 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0009744 GO:GO:0008270 GO:GO:0010182
GO:GO:0004386 GO:GO:0000932 eggNOG:COG1112 InterPro:IPR014001
PROSITE:PS51192 EMBL:AB013394 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL EMBL:AF484122 IPI:IPI00541997 RefSeq:NP_199512.2
UniGene:At.8584 ProteinModelPortal:Q9FJR0 SMR:Q9FJR0 STRING:Q9FJR0
PaxDb:Q9FJR0 PRIDE:Q9FJR0 EnsemblPlants:AT5G47010.1 GeneID:834747
KEGG:ath:AT5G47010 GeneFarm:2422 TAIR:At5g47010 InParanoid:Q9FJR0
PhylomeDB:Q9FJR0 ProtClustDB:CLSN2680462 Genevestigator:Q9FJR0
GermOnline:AT5G47010 Uniprot:Q9FJR0
Length = 1254
Score = 227 (85.0 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 60/175 (34%), Positives = 91/175 (52%)
Query: 258 ASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLP 317
A +I CT + L R++ + + ++IDE+ Q E E IPL L G++ +L+GD CQL
Sbjct: 630 ADVICCTCVGAADL-RLSNFRFRQVLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLG 687
Query: 318 AMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNV 377
++ + A L +SLFERL LG L +QYRMHP++S FP++ FY+ + + +
Sbjct: 688 PVIMCKKAARAGLAQSLFERLVTLGIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTI 747
Query: 378 KEKNYEKRFLPGRMYGPYSFINVLDGREESIAH--SYRNMVEVFVVMKILLNLYK 430
E+ P + F V G+EE A SY N E V K++ K
Sbjct: 748 IERQTTGIDFPWPVPNRPMFFYVQLGQEEISASGTSYLNRTEAANVEKLVTAFLK 802
Score = 75 (31.5 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 201 FG-PSLSSTLNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLL 251
FG P L LN SQ AV S L++ + LI GPPGTGKT T + ++
Sbjct: 481 FGVPGLPE-LNASQVNAVKSVLQKP-------ISLIQGPPGTGKTVTSAAIV 524
Score = 42 (19.8 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 19/68 (27%), Positives = 35/68 (51%)
Query: 998 NEAKHNVLCSELKQLYVAITRTRQRLWIWENMEEFSK-PMFD-----YWKKKSLVQ--VR 1049
NE + ++ ++L VA+TR R + I N + SK P+++ Y + + LV+ +
Sbjct: 865 NEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLN 924
Query: 1050 QLDDSLAQ 1057
L S+ Q
Sbjct: 925 NLKQSMVQ 932
>ASPGD|ASPL0000056713 [details] [associations]
symbol:AN0646 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001308 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
HOGENOM:HOG000205990 OMA:MFYEGSL ProteinModelPortal:C8VS08
EnsemblFungi:CADANIAT00002030 Uniprot:C8VS08
Length = 1077
Score = 208 (78.3 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 60/176 (34%), Positives = 93/176 (52%)
Query: 258 ASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLP 317
A +I CT + R+A + + ++IDE+ Q E E IPL L G + +L+GD QL
Sbjct: 563 ADVICCTCVGAGD-PRLAKLKFRTVLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLG 620
Query: 318 AMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNV 377
++ + + +A L +SLFERL LG + L++QYRMHP +S FP++ FY+ + +
Sbjct: 621 PVIMNKKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGITS 680
Query: 378 KEKNYEKRFLPGRMY-GPYSFINVLDGREESIAH--SYRNMVEVFVVMKILLNLYK 430
++ + P + P F + L G EE A SY N E V KI+ +K
Sbjct: 681 FDRLRREVDFPWPILDSPMMFWSNL-GNEEISASGTSYLNRTEAANVEKIVTRFFK 735
Score = 80 (33.2 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 52/219 (23%), Positives = 88/219 (40%)
Query: 42 FAQVVDLE---DSKPYGAMLSDVKVDYWRNRFSNYSKESYKVLPGDILVLADAKPETASD 98
F +V +E D K + D + W +N S+ +LP L L D K +
Sbjct: 255 FGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNKHLASF-ILPK--LELGDVKLAVGDE 311
Query: 99 LRR--VGRM---WTFVS-VTKVTEDKNESDTTSTSFKVKASKENQIDGANKSLFAIFLTN 152
+R G + W V V K+ N+SD + + K ++ + A ++
Sbjct: 312 MRLKYTGELRPKWEGVGYVIKIPN--NQSDEVTIELRAKGDHKSVPTECTHNFTADYVWK 369
Query: 153 VTSNTRIWNSLHMSGNLKIIKELLCTDSVVKEDCELCPVQSDGIWNDIFGPSLSSTLNDS 212
TS R+ ++ ++ ++ + P+++ + P L LN S
Sbjct: 370 STSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQ-MPKKFSVPGLPE-LNGS 427
Query: 213 QAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLL 251
Q AV S L+R + LI GPPGTGKT T + ++
Sbjct: 428 QINAVKSVLQRP-------LSLIQGPPGTGKTVTSATII 459
Score = 49 (22.3 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 30/122 (24%), Positives = 63/122 (51%)
Query: 946 ISNYVGKQALVLTIVESKGLEFQVIHYTS-QCCN-SPFKHALFDSTSPGSFPSFNEAKHN 1003
I+ Y G+++ +++ +++ G F+ HY + + F+ D S N+ +
Sbjct: 746 ITPYEGQRSYIVSSMQATGT-FKKEHYKEIEVASVDAFQGREKDFIILSCVRS-NDHQGI 803
Query: 1004 VLCSELKQLYVAITRTRQRLWIWENMEEFSK-PMFD----YWKKK-SLVQ--VRQLDDSL 1055
S+ ++L VA+TR + L I N + SK P+++ ++K++ +LV+ + L +SL
Sbjct: 804 GFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNCLLQHFKERHTLVEGPLSNLQESL 863
Query: 1056 AQ 1057
Q
Sbjct: 864 IQ 865
Score = 37 (18.1 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 752 FQKE---KLHHMAMDGFYGVNNSVTLHSSWESGAEEGLGETERPILRQLFVTVS 802
F+KE ++ ++D F G + S S +G+G P R+L V ++
Sbjct: 766 FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDP--RRLNVALT 817
>ZFIN|ZDB-GENE-040426-2836 [details] [associations]
symbol:upf1 "upf1 regulator of nonsense
transcripts homolog (yeast)" species:7955 "Danio rerio" [GO:0003677
"DNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009790 "embryo
development" evidence=IMP] InterPro:IPR018999 Pfam:PF09416
ZFIN:ZDB-GENE-040426-2836 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0009790 GO:GO:0004386
HOGENOM:HOG000205990 KO:K14326 CTD:5976 HOVERGEN:HBG061556
EMBL:BC045353 EMBL:FM986817 IPI:IPI00491565 RefSeq:NP_998639.1
UniGene:Dr.96025 SMR:Q7ZVZ4 STRING:Q7ZVZ4 GeneID:406783
KEGG:dre:406783 NextBio:20818296 Uniprot:Q7ZVZ4
Length = 1100
Score = 226 (84.6 bits), Expect = 1.4e-14, Sum P(4) = 1.4e-14
Identities = 63/176 (35%), Positives = 91/176 (51%)
Query: 258 ASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLP 317
A +I CT + R+A Q + ++IDE+ Q E E +P+ L G + IL+GD CQL
Sbjct: 590 ADVICCTCVGAGD-PRLAKMQFRSILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLG 647
Query: 318 AMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNV 377
+V + +A L +SLFERL LG L +QYRMHP++S+FP++ FY+ + +
Sbjct: 648 PVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTA 707
Query: 378 KEKNYEKRF-LPGRMYGPYSFINVLDGREE--SIAHSYRNMVEVFVVMKILLNLYK 430
++ +K F F V G+EE S SY N E V KI L K
Sbjct: 708 ADR-LKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLK 762
Score = 69 (29.3 bits), Expect = 1.4e-14, Sum P(4) = 1.4e-14
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 209 LNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLL 251
LN SQ AV + L+R + LI GPPGTGKT T + ++
Sbjct: 451 LNHSQVYAVKTVLQRP-------LSLIQGPPGTGKTVTSATIV 486
Score = 50 (22.7 bits), Expect = 1.4e-14, Sum P(4) = 1.4e-14
Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 998 NEAKHNVLCSELKQLYVAITRTRQRLWIWENMEEFSK-PMFD----YWKK-KSLVQ--VR 1049
NE + ++ ++L VA+TR R + I N + SK P+++ Y+K+ K LV+ +
Sbjct: 825 NEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLN 884
Query: 1050 QLDDSLAQ 1057
L +SL Q
Sbjct: 885 NLRESLMQ 892
Score = 38 (18.4 bits), Expect = 1.4e-14, Sum P(4) = 1.4e-14
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 15 FESFVFPLLEETRAQLSSSMEKISEAPFAQVVDLEDS 51
F F P +T+ Q S ++ P + + ED+
Sbjct: 35 FTDFTLPSQTQTQGQTQSQLDNQVNGPDGVLPNGEDA 71
>DICTYBASE|DDB_G0274399 [details] [associations]
symbol:DDB_G0274399 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR003593 SMART:SM00382
dictyBase:DDB_G0274399 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000012 GO:GO:0004386 eggNOG:COG1112 RefSeq:XP_644230.1
ProteinModelPortal:Q86AS0 EnsemblProtists:DDB0237968 GeneID:8619659
KEGG:ddi:DDB_G0274399 OMA:LIMISLH Uniprot:Q86AS0
Length = 967
Score = 195 (73.7 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 49/158 (31%), Positives = 81/158 (51%)
Query: 244 TKTVSMLLDFCFTKASLIFCTAS-SSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLP 302
T+ S + +A ++ T S S L ++IDEAAQ E + IP++
Sbjct: 549 TQDTSSIRTLVLDEADIVATTLSFSGASLLTKMAGGFDIVIIDEAAQAVETSTLIPIQ-H 607
Query: 303 GIQHAILIGDECQLPAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFP 362
G + +L+GD QLPA + S ++ + +SLF+RL + H+L+ QYRMH I +FP
Sbjct: 608 GCKKVVLVGDPKQLPATIISPLAIKYKYDQSLFQRLQEKN-SPHMLTTQYRMHSLIRAFP 666
Query: 363 NSYFYDNKIFDSPNVKEKNYEKRFLPGRMYGPYSFINV 400
+ +FY + + D PN+ + P +GP F ++
Sbjct: 667 SRHFYQDLLLDGPNIPSRATHYHSNP--FFGPLVFYDL 702
Score = 84 (34.6 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 32/102 (31%), Positives = 48/102 (47%)
Query: 150 LTNVTSNTRIWNSLHMSGNLKIIKELLCTDSVVKEDCELCPVQSDGIWNDIFGPSLSSTL 209
L N+++ R + +L+ +K L+ D ED + + + +D F SST
Sbjct: 283 LCNLSTLQREFAALYQCSQSNFMKTLMMRDDD-GEDGIVMKIPP--LLHDQF----SSTY 335
Query: 210 NDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLL 251
NDSQ A+ S L + LI GPPGTGKT + L+
Sbjct: 336 NDSQLNALTSALEGN------AITLIQGPPGTGKTHVILGLI 371
Score = 55 (24.4 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 38/156 (24%), Positives = 67/156 (42%)
Query: 1 VEQIPLSFQSVNRYFESFVFPLLEETRAQLSSSMEK-----ISEAPFAQV---VDLEDSK 52
++ + +SF + Y ++ L EE RAQL S+E+ SE ++V ++ D
Sbjct: 63 LKPVKVSFNNEEDYITTYEPLLFEECRAQLERSIEEGEKDDTSEPTLSRVRYISEVNDFL 122
Query: 53 PYGAMLSDVKVDYWRNRFSNYSKESYKV-LPGDILVLADAKPETASDLRRVG--RMWTFV 109
G ++++ V N F + + + L ++V + E +D T V
Sbjct: 123 VVGLVMAE-NV----NIFQFHDNDLIMISLHHPLIVFGMDEDEEMTDDEDTAPTSAATHV 177
Query: 110 SV-TKVTEDKNESDTTSTSFKVKASKENQIDGANKS 144
TK T + TT+T+ A+ N ID NK+
Sbjct: 178 GAPTKSTTTTTTTTTTTTTTTTTATT-NIIDDPNKT 212
Score = 47 (21.6 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 458 LWILGNARTLTRKKSVWEALV-HDANARQCFFNAEDE 493
L ILGN + L+ K W L+ H N +Q +D+
Sbjct: 818 LLILGNTKALSINKD-WNELIQHTQNNQQLIPVTKDQ 853
Score = 44 (20.5 bits), Expect = 2.6e-14, Sum P(5) = 2.6e-14
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 762 MDGFYGVNNSVTLHSSWESGAEEGLG 787
+DGF G + + S + EEG G
Sbjct: 772 VDGFQGREREIIIFSCVRAPVEEGAG 797
Score = 44 (20.5 bits), Expect = 2.6e-14, Sum P(5) = 2.6e-14
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 1007 SELKQLYVAITRTRQRLWIWENMEEFS 1033
S+++++ VA+TR R L I N + S
Sbjct: 802 SDVRRMNVALTRPRSSLLILGNTKALS 828
Score = 39 (18.8 bits), Expect = 9.6e-14, Sum P(4) = 9.6e-14
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 1067 EWKSRGIKLFHEHNYDMATICFE 1089
E K G +F+EH MA F+
Sbjct: 707 ETKPGGGSVFNEHECKMAMYLFQ 729
>FB|FBgn0035842 [details] [associations]
symbol:CG7504 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
SMART:SM00240 GO:GO:0005875 EMBL:AE014296 GO:GO:0006200
GO:GO:0016887 Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:COG1112
KO:K10706 GeneTree:ENSGT00580000081652 RefSeq:NP_001137907.1
UniGene:Dm.31993 ProteinModelPortal:B7Z0D7 SMR:B7Z0D7 STRING:B7Z0D7
PaxDb:B7Z0D7 EnsemblMetazoa:FBtr0273367 GeneID:38904
KEGG:dme:Dmel_CG7504 FlyBase:FBgn0035842 OMA:NRSKSCY
OrthoDB:EOG4DV42G GenomeRNAi:38904 NextBio:810939 Bgee:B7Z0D7
Uniprot:B7Z0D7
Length = 1676
Score = 188 (71.2 bits), Expect = 3.3e-14, Sum P(3) = 3.3e-14
Identities = 47/135 (34%), Positives = 75/135 (55%)
Query: 254 CFTKASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDE 313
C T+A++I T SS KL ++ ++DEA Q E + +P++ G+ H +L+GD
Sbjct: 1361 CVTRANIICTTLSSCVKLANY-VDFFDICIVDEATQCTEPWTLLPMRF-GLTHMVLVGDM 1418
Query: 314 CQLPAMVESSVSGEACLGRSLFERLSNLGQAK-------HL-------LSIQYRMHPSIS 359
QLPA+V S + + L S+F+R+ Q + HL LS QYRMHP I
Sbjct: 1419 QQLPAVVLSKKAIDFGLSNSMFDRIQRSLQTQLDKPGSYHLMHTKLFKLSTQYRMHPEIC 1478
Query: 360 SFPNSYFYDNKIFDS 374
+PN YFY++++ ++
Sbjct: 1479 RWPNQYFYEDQLINA 1493
Score = 82 (33.9 bits), Expect = 3.3e-14, Sum P(3) = 3.3e-14
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 209 LNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSML 250
LN+ Q VL +R D + ++ LI GPPGTGK++ +S L
Sbjct: 1172 LNEHQENIVLHTYQRIIDDLQPSLTLIQGPPGTGKSRVISEL 1213
Score = 70 (29.7 bits), Expect = 3.3e-14, Sum P(3) = 3.3e-14
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 457 CLWILGNARTLTRKKSVWEALVHDANARQCFFNAE--DEEDLGKAIL 501
CL I GN L + +W L+ DA R+ +FN + D DL ++++
Sbjct: 1620 CLVICGNFEDL-KSVEMWRNLLDDARKRKVYFNLDRDDVNDLDRSLI 1665
Score = 43 (20.2 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 1010 KQLYVAITRTRQRLWIWENMEEFS-----KPMFDYWKKKSLV------QVRQLDDSLAQA 1058
++L VA+TR R+ L I N E+ + + D +K+ + V LD SL +
Sbjct: 1608 QRLNVALTRPRRCLVICGNFEDLKSVEMWRNLLDDARKRKVYFNLDRDDVNDLDRSLIKK 1667
Query: 1059 MQV 1061
M V
Sbjct: 1668 MMV 1670
>UNIPROTKB|I3L717 [details] [associations]
symbol:LOC100514320 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000212 InterPro:IPR014016
Pfam:PF00580 GO:GO:0005524 GO:GO:0003677 GO:GO:0004003
PANTHER:PTHR11070 GeneTree:ENSGT00620000088104 EMBL:CU856332
Ensembl:ENSSSCT00000031166 OMA:STHEECA Uniprot:I3L717
Length = 827
Score = 131 (51.2 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 45/166 (27%), Positives = 85/166 (51%)
Query: 593 YFQVLKVWDILPLEDVPKLVARLDNILAKYTDEFINHCKEKCIEGNLEVPKTWAATSKVV 652
Y +++++WDI+ D KL + I Y + ++ K ++G+ + + A K+
Sbjct: 104 YTEIIRIWDIVLDHD--KLKDSIRAICGAY-NRGLSCILRKKLKGDHKGQVS--ANMKIQ 158
Query: 653 RFKNLADIDSDSESDLGGAASDSTSYVENSNVSDSLLLMKFYSLSSGAVSHLLSDRDGGE 712
+ ++ D+E+D GA + + S V +MKF+S S+ S++L+D
Sbjct: 159 KRIPRCYVE-DTEADQSGAYMEPEYFPPASAVETEYNIMKFHSFSTSMASNILNDTTT-T 216
Query: 713 LDLPFEVTDEQLEMI-LFPKSS---FILGRSGTGKTTILTMKLFQK 754
++ PF V + + +I L P+ ++GRSGTGKTT +L++K
Sbjct: 217 VEYPFRVGELEYAVIDLNPRPLEPIILIGRSGTGKTTCCLYRLWKK 262
Score = 126 (49.4 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 37/100 (37%), Positives = 55/100 (55%)
Query: 891 ETSLIYGEPPILLESRNDENAIIKIFGNSGDAGGNMVGFGAEQVILVRDDCVRKEISNYV 950
++ L G PI+LES + + I + GN + FGA QVILV ++ +++I +
Sbjct: 714 DSGLFDGPRPIVLESCSVSDLAILLRGNKRKT--QPIEFGAHQVILVANEMAKEKIPEEL 771
Query: 951 GKQALVLTIVESKGLEFQVIHYTSQCCNSPFKHALFDSTS 990
G ALVLT+ E+KGLEF + + +S HA F S S
Sbjct: 772 GL-ALVLTVYEAKGLEFDDVLLYNFFTDSEVCHAEFFSRS 810
Score = 73 (30.8 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 27/104 (25%), Positives = 48/104 (46%)
Query: 781 GAEEGLGETERPI--LRQLFVTVSPKLCFAVKQHISQMISSAFGGKFVAESRLIDIDDAA 838
GAE E + L Q+FVT + LC V+++ +++ S A S ++ +
Sbjct: 346 GAEGPAPEQPHQLEHLHQIFVTKNHVLCQEVQRNFTELSKST-----KATSHYKSLEPSV 400
Query: 839 EFKDIPNSFADIPAESHPLVITFHKFLMMLDGTLGSSYFERFHD 882
+ D+ E+ PL +T + L++LD +L +F R D
Sbjct: 401 ------HRLQDLKDENFPLFVTSKQLLLLLDASLPEPFFLRNED 438
Score = 50 (22.7 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 34/134 (25%), Positives = 55/134 (41%)
Query: 1619 RSTEHFFDS---IFPLDRRESLKMNMITLKGTEFYRNIIKEVIFKHLKDSPSYGRIGSVM 1675
RS + +FD ++ L RR S K+ ++ E Y + I++ F + + I
Sbjct: 573 RSQKGYFDEEDVLYNLSRRLS-KLKVLPWSIHELYGDEIQD--FTQAELALLMKCINDPN 629
Query: 1676 VMILGSGKLGNDVYERVAKWFDGNSLWKELFESLSWNMGSKSC--QGSASCHNFDELKES 1733
M L +G + + VA F + L + LF S N G K C + H + S
Sbjct: 630 AMFL-TGDTAQSIMKGVA--FRFSDL-RSLFHYASKNTGDKQCAVRKPKKIHQLYQNYRS 685
Query: 1734 H--IQKFYKALVDI 1745
H I +VD+
Sbjct: 686 HSGILSLASGVVDL 699
Score = 46 (21.3 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 20/70 (28%), Positives = 34/70 (48%)
Query: 985 LFDSTSPGSFPSFNEAKHNVLCSELKQLYVAITRTRQRLWI--WENMEEFSKPMFDYWKK 1042
L D++ P F NE LK+ V + T++ L I W+ EE ++ DY ++
Sbjct: 423 LLDASLPEPFFLRNED------GSLKRTIVGWS-TQEELSIPNWQEDEEEAEADGDYGEE 475
Query: 1043 KSLVQVRQLD 1052
+ +V+ R D
Sbjct: 476 EKVVETRPCD 485
Score = 40 (19.1 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 17/63 (26%), Positives = 24/63 (38%)
Query: 1685 GNDVYERVAKWFDGNSLWKELFESLSWNMGSKSCQGSASCHNFDELKESHIQKFYKALVD 1744
G Y W + S K FE+LS S QG + + +L F + +
Sbjct: 508 GKTSYNPALIWKEIKSFLKGSFEALS------SPQGRLTEEAYKQLGRKRSPNFKEDRSE 561
Query: 1745 IYG 1747
IYG
Sbjct: 562 IYG 564
Score = 39 (18.8 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 1466 KDKIVNVIEYLGCLKSQDFSDHGSYGD 1492
+D + N+ L LK +S H YGD
Sbjct: 582 EDVLYNLSRRLSKLKVLPWSIHELYGD 608
>CGD|CAL0003666 [details] [associations]
symbol:NAM7 species:5476 "Candida albicans" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IEA] [GO:0008298 "intracellular mRNA localization"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
CGD:CAL0003666 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0004386 eggNOG:COG1112
InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000063
EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1 RefSeq:XP_716838.1
ProteinModelPortal:Q5A507 SMR:Q5A507 STRING:Q5A507 GeneID:3641489
GeneID:3641540 KEGG:cal:CaO19.8554 KEGG:cal:CaO19.939
Uniprot:Q5A507
Length = 1019
Score = 235 (87.8 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 63/178 (35%), Positives = 95/178 (53%)
Query: 257 KASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQL 316
KA ++ CT + R++ + K ++IDE+ Q E E IP+ + G + IL+GD QL
Sbjct: 578 KAEVVCCTCVGAAD-RRLSQFRFKTVLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQL 635
Query: 317 PAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPN 376
++ + +A L +SLFERL LG L +QYRMHP +S FP++ FY+ + +
Sbjct: 636 GPVILDKKAADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVT 695
Query: 377 VKEKNYEKRFLPGRMYG-PYSF-INVLDGREESIA--HSYRNMVEVFVVMKILLNLYK 430
++ E+ P + P F N GREE A +SY N VE V KI+ L+K
Sbjct: 696 SDDRLIEESTFPWPVIDTPMMFWANY--GREELSASGNSYLNRVEAMNVEKIITKLFK 751
Score = 44 (20.5 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 458 LWILGNARTLTRKKSVWE-ALVH 479
L ILGN R+L R + +W L+H
Sbjct: 841 LVILGNPRSLCRNR-LWNHLLIH 862
>UNIPROTKB|Q5A507 [details] [associations]
symbol:NAM7 "Putative uncharacterized protein NAM7"
species:237561 "Candida albicans SC5314" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 CGD:CAL0003666 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
EMBL:AACQ01000063 EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1
RefSeq:XP_716838.1 ProteinModelPortal:Q5A507 SMR:Q5A507
STRING:Q5A507 GeneID:3641489 GeneID:3641540 KEGG:cal:CaO19.8554
KEGG:cal:CaO19.939 Uniprot:Q5A507
Length = 1019
Score = 235 (87.8 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 63/178 (35%), Positives = 95/178 (53%)
Query: 257 KASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQL 316
KA ++ CT + R++ + K ++IDE+ Q E E IP+ + G + IL+GD QL
Sbjct: 578 KAEVVCCTCVGAAD-RRLSQFRFKTVLIDESTQASEPEVLIPI-VKGAKQVILVGDHQQL 635
Query: 317 PAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPN 376
++ + +A L +SLFERL LG L +QYRMHP +S FP++ FY+ + +
Sbjct: 636 GPVILDKKAADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVT 695
Query: 377 VKEKNYEKRFLPGRMYG-PYSF-INVLDGREESIA--HSYRNMVEVFVVMKILLNLYK 430
++ E+ P + P F N GREE A +SY N VE V KI+ L+K
Sbjct: 696 SDDRLIEESTFPWPVIDTPMMFWANY--GREELSASGNSYLNRVEAMNVEKIITKLFK 751
Score = 44 (20.5 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 458 LWILGNARTLTRKKSVWE-ALVH 479
L ILGN R+L R + +W L+H
Sbjct: 841 LVILGNPRSLCRNR-LWNHLLIH 862
>UNIPROTKB|G4NIZ8 [details] [associations]
symbol:MGG_02784 "DNA-binding protein SMUBP-2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR024714 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0008033 GO:GO:0004386 EMBL:CM001237
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_003720957.1 EnsemblFungi:MGG_02784T0 GeneID:2682672
KEGG:mgr:MGG_02784 Uniprot:G4NIZ8
Length = 2037
Score = 209 (78.6 bits), Expect = 9.2e-14, Sum P(4) = 9.2e-14
Identities = 58/173 (33%), Positives = 92/173 (53%)
Query: 256 TKASLIFCTASSS-YKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDEC 314
++A ++ T S + + + + + + ++IDEAAQ E+ + IPLK G IL+GD
Sbjct: 1550 SEAHVLCATLSGAGHDMFKSLQVEFETVIIDEAAQCVELSALIPLKY-GASKCILVGDPK 1608
Query: 315 QLPAMVESSVSGEACLGRSLFERLSNLGQAK-HLLSIQYRMHPSISSFPNSYFYDNKIFD 373
QLP V S + +SLF R+ K HLL QYRMHP IS +P+ FY+ + D
Sbjct: 1609 QLPPTVLSQSAARYGYDQSLFVRMQQNHPGKVHLLDCQYRMHPEISLYPSKEFYEGLLAD 1668
Query: 374 SPNVKEKNYEKRFLPGRMYGPYSFINVLDGREE--SIAHSYRNMVEVFVVMKI 424
++ K ++ + + GPY F +V +G +E S S N E+ V ++I
Sbjct: 1669 GSDMA-KLRQQPWHDNPLLGPYRFFDV-EGIQERGSRGQSLVNTNEINVAIQI 1719
Score = 69 (29.3 bits), Expect = 9.2e-14, Sum P(4) = 9.2e-14
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 458 LWILGNARTLTRKKSVWEALVHDANARQCFFNAEDEEDL--GKAILG 502
LWILG++R L R+ W L+ D+ AR + L KAI G
Sbjct: 1815 LWILGDSRAL-RQGEFWNKLIEDSKARDRYTQGSIISQLRNSKAIKG 1860
Score = 66 (28.3 bits), Expect = 9.2e-14, Sum P(4) = 9.2e-14
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 234 LIWGPPGTGKTKTVSMLLDFCFT 256
L+ GPPGTGKTKT+ ++ T
Sbjct: 1346 LVQGPPGTGKTKTIIAMVGALLT 1368
Score = 51 (23.0 bits), Expect = 5.7e-12, Sum P(4) = 5.7e-12
Identities = 12/51 (23%), Positives = 26/51 (50%)
Query: 1007 SELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKKKSLVQVRQLDDSLAQ 1057
++++++ V +TR R LWI + + ++W K L++ + D Q
Sbjct: 1799 TDIRRMNVGLTRARSSLWILGDSRALRQG--EFWNK--LIEDSKARDRYTQ 1845
Score = 44 (20.5 bits), Expect = 9.2e-14, Sum P(4) = 9.2e-14
Identities = 29/130 (22%), Positives = 55/130 (42%)
Query: 24 EETRAQLSSSMEKISEAPFAQVVDLEDSKP-YGAMLSDVKVDYWRNRFSNYSKESYKVLP 82
++ RA+++ ME++ EA + E S P G +V Y N +Y + + +L
Sbjct: 1101 KDLRARITPPMERLHEAILEWDIFHEGSDPPNGYKCKEVAKSY-TNPV-DYRETFFPMLV 1158
Query: 83 GDIL-VLADAKPETASDLRRVGRMWTFVSVTKVTEDKNESDTTSTSFKVKASKENQIDGA 141
+ +K E+ + + ++ T SV K E +TS + A+K+ D
Sbjct: 1159 NEAWRSFVTSKDESTAKPFDI-KITTRTSVDKFLE-------VATSMPISANKDKDRDRL 1210
Query: 142 NKSLFAIFLT 151
+ +F T
Sbjct: 1211 SDGDIVLFST 1220
Score = 41 (19.5 bits), Expect = 5.6e-11, Sum P(4) = 5.6e-11
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 1201 KGKLFEIGLQYMNHWKQHADTDVEHAGTD 1229
K +LF + ++ W + D+E TD
Sbjct: 1744 KAQLFALRQKFQERWGEGVLEDIEFNTTD 1772
Score = 38 (18.4 bits), Expect = 3.6e-13, Sum P(4) = 3.6e-13
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 202 GPSLSSTLNDSQAQAVLSCLRRTHC 226
GP SSTL + AV++ C
Sbjct: 161 GPMKSSTLTKKEPTAVVALYEALCC 185
>FB|FBgn0030354 [details] [associations]
symbol:Upf1 "Upf1" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS;IMP;NAS] [GO:0005737 "cytoplasm"
evidence=IEA;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0035195 "gene silencing by miRNA" evidence=IMP] [GO:0071456
"cellular response to hypoxia" evidence=IMP] [GO:0035145 "exon-exon
junction complex" evidence=IDA] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 EMBL:AE014298 GO:GO:0008270 GO:GO:0071456
GO:GO:0004386 eggNOG:COG1112 GeneTree:ENSGT00550000074391 KO:K14326
OMA:MFYEGSL EMBL:AY061379 RefSeq:NP_572767.1 UniGene:Dm.3617
ProteinModelPortal:Q9VYS3 SMR:Q9VYS3 STRING:Q9VYS3 PaxDb:Q9VYS3
PRIDE:Q9VYS3 EnsemblMetazoa:FBtr0073596 GeneID:32153
KEGG:dme:Dmel_CG1559 UCSC:CG1559-RA CTD:5976 FlyBase:FBgn0030354
InParanoid:Q9VYS3 OrthoDB:EOG476HF1 PhylomeDB:Q9VYS3
GenomeRNAi:32153 NextBio:777131 Bgee:Q9VYS3 GermOnline:CG1559
Uniprot:Q9VYS3
Length = 1180
Score = 214 (80.4 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 58/175 (33%), Positives = 89/175 (50%)
Query: 258 ASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLP 317
A +I CT + R++ + ++IDE+ Q E E +P+ L G + IL+GD CQL
Sbjct: 591 ADVICCTCVGAGD-GRLSRVKFTSILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLG 648
Query: 318 AMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNV 377
+V + A L +SLFERL LG L +QYRMHP +S FP+++FY+ + +
Sbjct: 649 PVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCA 708
Query: 378 KEKNYEKRFLPGRMYGPYSFINVLDGREESIAH--SYRNMVEVFVVMKILLNLYK 430
+++ + F + P F+ V G+EE S+ N E V KI K
Sbjct: 709 EDRRLKLDFPWPQPERPMFFL-VTQGQEEIAGSGTSFLNRTEAANVEKITTRFLK 762
Score = 68 (29.0 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 209 LNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLLDFCFTK---ASLIFCTA 265
LN SQ AV L+R + LI GPPGTGKT T + ++ + K +++ C
Sbjct: 452 LNRSQVYAVKHALQRP-------LSLIQGPPGTGKTVTSATIV-YQLVKLHGGTVLVCAP 503
Query: 266 SSSY------KLHRVAMEQLK 280
S++ K+HR ++ ++
Sbjct: 504 SNTAVDQLTEKIHRTNLKVVR 524
Score = 44 (20.5 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 14/56 (25%), Positives = 28/56 (50%)
Query: 747 LTMKLFQKEKLHHMAMDGFYGVNNSVTLHSSWESGAEEGLGETERPILRQLFVTVS 802
L +L+Q+ ++ ++D F G + + S S +G+G P R+L V ++
Sbjct: 793 LHSRLYQEIEI--ASVDAFQGREKDIIIMSCVRSNERQGIGFLNDP--RRLNVALT 844
>POMBASE|SPBC29A10.10c [details] [associations]
symbol:SPBC29A10.10c "tRNA-splicing endonuclease
positive effector (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=ISO] [GO:0016180 "snRNA processing" evidence=ISO]
[GO:0035649 "Nrd1 complex" evidence=ISO] [GO:0043144 "snoRNA
processing" evidence=ISO] InterPro:IPR024714 PomBase:SPBC29A10.10c
GO:GO:0005524 GO:GO:0005634 EMBL:CU329671 GO:GO:0008033
eggNOG:COG1112 GO:GO:0006364 GO:GO:0004004 GO:GO:0006369
GO:GO:0043144 GO:GO:0016180 KO:K10706 GO:GO:0035649
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
OrthoDB:EOG4MPMZ6 PIR:T40065 RefSeq:NP_596055.1
ProteinModelPortal:O94387 EnsemblFungi:SPBC29A10.10c.1
GeneID:2540523 KEGG:spo:SPBC29A10.10c NextBio:20801650
Uniprot:O94387
Length = 1944
Score = 223 (83.6 bits), Expect = 2.7e-13, Sum P(4) = 2.7e-13
Identities = 59/169 (34%), Positives = 93/169 (55%)
Query: 257 KASLIFCTASSS-YKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQ 315
+A ++ T S+S ++L A + ++IDEAAQ E+ S IPLK G + +++GD Q
Sbjct: 1487 EADIVCATLSASGHELLLNAGLTFRTVIIDEAAQAVELSSIIPLKY-GCESCVMVGDPNQ 1545
Query: 316 LPAMVESSVSGEACLGRSLFERL-SNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDS 374
LP V S S + +SL+ R+ ++ LLSIQYRM+P IS FP+ +FY++K+ D
Sbjct: 1546 LPPTVLSKTSAKFGYSQSLYVRMFKQHNESACLLSIQYRMNPEISRFPSKFFYNSKLLDG 1605
Query: 375 PNVKEKNYEKRFLPGRMYGPYSFINVLDGREESIAHSYRNMVEV-FVVM 422
PN+ + + G Y F NV S + S N+ E F+++
Sbjct: 1606 PNMSAVT-SRPWHEDPQLGIYRFFNVHGTEAFSNSKSLYNVEEASFILL 1653
Score = 71 (30.1 bits), Expect = 2.7e-13, Sum P(4) = 2.7e-13
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 234 LIWGPPGTGKTKTVSMLLDFCFTKAS 259
LI GPPGTGKTKT+ ++ T +S
Sbjct: 1290 LIQGPPGTGKTKTILGMIGAVLTSSS 1315
Score = 46 (21.3 bits), Expect = 1.9e-12, Sum P(5) = 1.9e-12
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 1008 ELKQLYVAITRTRQRLWIWENMEEFSKPM 1036
+L++L VA+TR + L+I N SKP+
Sbjct: 1734 DLRRLNVALTRAKSSLYIVGN----SKPL 1758
Score = 45 (20.9 bits), Expect = 2.7e-13, Sum P(4) = 2.7e-13
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 751 LFQKEKLHHMAMDGFYGVNNSVTLHSSWESGAEEGLGETERPILRQLFVTVS 802
+F+ +H +DGF G + + S S G+G + LR+L V ++
Sbjct: 1696 IFKHLDIH--TVDGFQGQEKDIIIFSCVRSSMSGGIGFLQD--LRRLNVALT 1743
Score = 43 (20.2 bits), Expect = 2.7e-13, Sum P(4) = 2.7e-13
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 166 SGNLKIIKELLCTDSVVKEDCELCPVQSDGIWN 198
+G++ IIK + +DSVV EL Q N
Sbjct: 594 TGSISIIKSISLSDSVVDTIGELLRSQFSNTLN 626
Score = 40 (19.1 bits), Expect = 3.6e-12, Sum P(5) = 3.6e-12
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 3 QIPLSFQSVNRYFESFVFPLLEETRAQLSSSMEKISEAPFAQVVD 47
Q ++ N Y + F L E AQ+ S++E+ P +++
Sbjct: 1087 QAKFTYNDSNAYEKVFKPMLFHECWAQVKSAVEEKQYPPIDLILN 1131
Score = 37 (18.1 bits), Expect = 1.9e-12, Sum P(5) = 1.9e-12
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 928 GFGAEQVILVRDDCVRKEISNYVG 951
GF ++ ++ CVR +S +G
Sbjct: 1707 GFQGQEKDIIIFSCVRSSMSGGIG 1730
>UNIPROTKB|E1C4T7 [details] [associations]
symbol:Gga.18015 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654
GO:GO:0006302 GeneTree:ENSGT00580000081652 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:AADN02026516 IPI:IPI00575045
Ensembl:ENSGALT00000005801 Uniprot:E1C4T7
Length = 2503
Score = 198 (74.8 bits), Expect = 5.0e-12, Sum P(3) = 5.0e-12
Identities = 62/186 (33%), Positives = 94/186 (50%)
Query: 257 KASLIFCTASSS------YKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILI 310
++ +I CT S+S R ++ +++DEA Q EVE+ IPL + +L+
Sbjct: 2170 ESDIICCTLSTSGGGLLESAFWRQGLDPFSCVIVDEAGQSCEVETLIPL-IHRCNKLVLV 2228
Query: 311 GDECQLPAMVESSVSGEACLGRSLFERL---------SNLGQAKHL--LSIQYRMHPSIS 359
GD QLP ++S + E G+SL RL +NL + + L++QYRMHP I
Sbjct: 2229 GDPRQLPPTIKSIKAQEYGYGQSLMARLQRHLEEQVQNNLLRRLPVVQLTVQYRMHPDIC 2288
Query: 360 SFPNSYFYDNKIFDSPNVKEKNYEKRFLPGRMYGPYSFINVLDGREESIAHSYRNMVEVF 419
FP+SY YD K + E+N P + PY +V DG EE S+ N EV
Sbjct: 2289 LFPSSYIYD-KTLKTDKATEENRCSSEWP---FQPYLVFDVGDGHEERDKDSFSNPQEVK 2344
Query: 420 VVMKIL 425
+V++I+
Sbjct: 2345 LVLEII 2350
Score = 80 (33.2 bits), Expect = 5.0e-12, Sum P(3) = 5.0e-12
Identities = 61/268 (22%), Positives = 110/268 (41%)
Query: 1 VEQIPLSFQSVNRYFESFVFPLLEETRAQLSSSMEKISEAPFAQVVDLEDSKPYGAMLSD 60
V +P+ FQ N YF +F FPL+ + ++ E +++ + + ++D K Y L +
Sbjct: 1754 VASVPIRFQGYNDYFNTF-FPLM------MLNAFETLAQE-WVENQKMKD-KTYYLHLQN 1804
Query: 61 VKVDYWRNRFSNYSKES--YKVL-P--GDILVLADAKPETA--SD-------LRRVGRMW 106
D F Y +E+ K L P D++ L K + D + VG +
Sbjct: 1805 FCADLNTAEFIGYFEETDLTKQLHPKEDDLIFLVGQKKKNVFGEDREVEDHLVNHVGLVR 1864
Query: 107 TFVSVTKVTEDKNESDTTSTSFKVKASKENQIDGANKSLFAIFLTNVTSNTRIWNSLHMS 166
F + +N+ T V+ ++ N N + + + ++ R + L +
Sbjct: 1865 RFSRASGCLTRQNDQHTVC-HLSVQ-TRGNLSFFVNNEVKCMVVGSLVPTQRSFKGLLLL 1922
Query: 167 GNLKIIKELLCTDSVVKEDCEL-CPVQSDGIWNDIFGPSLSSTLNDSQAQAVLSCLRRTH 225
+ K ++ + + C PV S+ F + N+ Q +A+ +
Sbjct: 1923 SRSPLAKPII--NPSYSDFCPRDLPVSSESA---TF---CMNEYNEDQKRAIETAYAMVK 1974
Query: 226 CDHK--ATVELIWGPPGTGKTKTVSMLL 251
H A + LI GPPGTGK+KT+ LL
Sbjct: 1975 -QHPGLAKICLIHGPPGTGKSKTIVGLL 2001
Score = 46 (21.3 bits), Expect = 5.0e-12, Sum P(3) = 5.0e-12
Identities = 20/79 (25%), Positives = 39/79 (49%)
Query: 998 NEAKHNV-LCSELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKKKSLVQVRQLDDSLA 1056
N +K ++ + L++L V ITR R L+I ++ + D W K L+Q D+
Sbjct: 2416 NSSKGSIGFLASLQRLNVTITRARFSLFILGRLKTLMENK-D-WNK--LIQ-----DAQR 2466
Query: 1057 QAMQVASSPEEWKSRGIKL 1075
+ + +S + +K +K+
Sbjct: 2467 RGAIIKTSDKSYKKDALKI 2485
Score = 40 (19.1 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 26 TRAQLSSSMEKISEAPFAQVVDL-EDSKPYGAM---LSDVK 62
T +Q+ + K+S A +A+ V+ +S +M + DVK
Sbjct: 962 TNSQIDKELSKLSLAAYAKSVNFPSESSQESSMHHNICDVK 1002
>GENEDB_PFALCIPARUM|MAL7P1.12 [details] [associations]
symbol:MAL7P1.12 "erythrocyte
membrane-associated antigen" species:5833 "Plasmodium falciparum"
[GO:0016020 "membrane" evidence=ISS] GO:GO:0016020
InterPro:IPR014001 SMART:SM00487 EMBL:AL844506
RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35 IntAct:Q8IC35
MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA GeneID:2655186
KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 188 (71.2 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 81/270 (30%), Positives = 128/270 (47%)
Query: 277 EQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFE 336
E+ + ++IDE AQ E + IPL + +LIGD QLP + S + + L +SL E
Sbjct: 1918 EKFERVIIDECAQSIEPSNLIPLG-HYCNNLVLIGDHKQLPPTIISPDAIKLGLDKSLLE 1976
Query: 337 RLSNLGQAK-HLLSIQYRMHPSISSFPNSYFYDNKIFDSPNVKEKNYE--KRFLPGRMYG 393
R A HLL+ Q RMH SI FPN +FYDNK+ + NV E+N K FL
Sbjct: 1977 RFVMAKIAPVHLLNTQRRMHLSICVFPNFHFYDNKL-KTANVTEENRPIIKGFLWPNPKC 2035
Query: 394 PYSFINVLDGREESIAHSYRNMVEVFVVMKILLNLYKVHNVSNLCSSLMKK-CINVKYF- 451
+FI+V G+ S + N + K NLY++ + + S++ + C++V
Sbjct: 2036 RLAFIDVSIGKPGS---KFEN---AYGTSKF--NLYEIEPLITVLKSIINEGCVSVDEIG 2087
Query: 452 FLSMHCLWILGNARTLTRKKSVWEALVHDANAR------QCFFNAEDEEDLGKAILG-VK 504
L+ + +A+ + KK+V +A ++A+ R F E + L A+
Sbjct: 2088 ILTAY------DAQKMKLKKAVQDAFSYEASHRIEIDSIDGFQGKEKDLILFSAVRSNAN 2141
Query: 505 KELDEFDDLLNPGSILFRSQRWKVNFSENF 534
EL D +L R++R + F + F
Sbjct: 2142 NELGFLRDARRLNVMLTRAKRGVILFGDQF 2171
Score = 78 (32.5 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 209 LNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLLD 252
LNDSQ A LS L R + L+ GPPGTGKT ++D
Sbjct: 1777 LNDSQKLACLSALTRR-------LTLVQGPPGTGKTHVACAIID 1813
>UNIPROTKB|Q8IC35 [details] [associations]
symbol:MAL7P1.12 "Erythrocyte membrane-associated antigen"
species:36329 "Plasmodium falciparum 3D7" [GO:0016020 "membrane"
evidence=ISS] GO:GO:0016020 InterPro:IPR014001 SMART:SM00487
EMBL:AL844506 RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35
IntAct:Q8IC35 MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA
GeneID:2655186 KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 188 (71.2 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 81/270 (30%), Positives = 128/270 (47%)
Query: 277 EQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFE 336
E+ + ++IDE AQ E + IPL + +LIGD QLP + S + + L +SL E
Sbjct: 1918 EKFERVIIDECAQSIEPSNLIPLG-HYCNNLVLIGDHKQLPPTIISPDAIKLGLDKSLLE 1976
Query: 337 RLSNLGQAK-HLLSIQYRMHPSISSFPNSYFYDNKIFDSPNVKEKNYE--KRFLPGRMYG 393
R A HLL+ Q RMH SI FPN +FYDNK+ + NV E+N K FL
Sbjct: 1977 RFVMAKIAPVHLLNTQRRMHLSICVFPNFHFYDNKL-KTANVTEENRPIIKGFLWPNPKC 2035
Query: 394 PYSFINVLDGREESIAHSYRNMVEVFVVMKILLNLYKVHNVSNLCSSLMKK-CINVKYF- 451
+FI+V G+ S + N + K NLY++ + + S++ + C++V
Sbjct: 2036 RLAFIDVSIGKPGS---KFEN---AYGTSKF--NLYEIEPLITVLKSIINEGCVSVDEIG 2087
Query: 452 FLSMHCLWILGNARTLTRKKSVWEALVHDANAR------QCFFNAEDEEDLGKAILG-VK 504
L+ + +A+ + KK+V +A ++A+ R F E + L A+
Sbjct: 2088 ILTAY------DAQKMKLKKAVQDAFSYEASHRIEIDSIDGFQGKEKDLILFSAVRSNAN 2141
Query: 505 KELDEFDDLLNPGSILFRSQRWKVNFSENF 534
EL D +L R++R + F + F
Sbjct: 2142 NELGFLRDARRLNVMLTRAKRGVILFGDQF 2171
Score = 78 (32.5 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 209 LNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLLD 252
LNDSQ A LS L R + L+ GPPGTGKT ++D
Sbjct: 1777 LNDSQKLACLSALTRR-------LTLVQGPPGTGKTHVACAIID 1813
>POMBASE|SPAC6G9.10c [details] [associations]
symbol:sen1 "ATP-dependent 5' to 3' DNA/RNA helicase
Sen1" species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0006369
"termination of RNA polymerase II transcription" evidence=ISO]
[GO:0008033 "tRNA processing" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0016180 "snRNA
processing" evidence=ISO] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0035649 "Nrd1 complex"
evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0043144 "snoRNA processing"
evidence=ISO] InterPro:IPR024714 PomBase:SPAC6G9.10c GO:GO:0005524
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006397
GO:GO:0008033 eggNOG:COG1112 GO:GO:0006364 GO:GO:0006369
GO:GO:0043144 GO:GO:0043141 GO:GO:0016180 KO:K10706 GO:GO:0035649
PIR:T39072 RefSeq:NP_594119.1 ProteinModelPortal:Q92355
EnsemblFungi:SPAC6G9.10c.1 GeneID:2541556 KEGG:spo:SPAC6G9.10c
OrthoDB:EOG4BCHWF NextBio:20802652 GO:GO:0032575 InterPro:IPR024481
PANTHER:PTHR10887:SF164 Pfam:PF12726 Uniprot:Q92355
Length = 1687
Score = 224 (83.9 bits), Expect = 2.0e-11, Sum P(5) = 2.0e-11
Identities = 68/196 (34%), Positives = 97/196 (49%)
Query: 243 KTKTVSML---LDFCFTKASLIFCTASSSYKLHRVAMEQLKF--LVIDEAAQLKEVESAI 297
K K V +L K + + C S VA L F ++IDEAAQ E+++ I
Sbjct: 1331 KNKEVDLLRKKAQKAILKQADVVCATLSGSGHDLVAHSSLNFSTVIIDEAAQAVELDTII 1390
Query: 298 PLKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERLS-NLGQAKHLLSIQYRMHP 356
PL+ G + IL+GD QLP V S + +SLF R+ N LLSIQYRMHP
Sbjct: 1391 PLRY-GAKKCILVGDPNQLPPTVLSKKAASLNYSQSLFVRIQKNFSNQMCLLSIQYRMHP 1449
Query: 357 SISSFPNSYFYDNKIFDSPNVKEKNYEKRFLPGRMYGPYSFINVLDGREESIAHSYRNMV 416
IS FP+ FYD+++ D N+ EK + + + + Y +V S S N+
Sbjct: 1450 DISHFPSKKFYDSRLEDGDNMAEKTQQVWHVNPK-FTQYRLFDVRGKERTSNTMSTYNLE 1508
Query: 417 EV-FVVMKI--LLNLY 429
EV ++V + LLN +
Sbjct: 1509 EVEYLVNMVDELLNKF 1524
Score = 59 (25.8 bits), Expect = 2.0e-11, Sum P(5) = 2.0e-11
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 1000 AKHNV-LCSELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKKKSLVQVRQLDDSLAQA 1058
+KH + + ++L VA+TR R L I NME D W SLV DD+L++
Sbjct: 1587 SKHGIGFLRDFRRLNVALTRARSSLLIIGNMETLKTD--DLWG--SLV-----DDALSR- 1636
Query: 1059 MQVASSP 1065
++ SP
Sbjct: 1637 -KLVESP 1642
Score = 47 (21.6 bits), Expect = 3.1e-10, Sum P(5) = 3.1e-10
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 1634 RESLKM--NMITLKGTEFYRNIIKEVIFKHLKDSP---SYGRI 1671
R SL + NM TLK + + +++ + + + L +SP S GR+
Sbjct: 1608 RSSLLIIGNMETLKTDDLWGSLVDDALSRKLVESPHIDSEGRL 1650
Score = 41 (19.5 bits), Expect = 2.0e-11, Sum P(5) = 2.0e-11
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 605 LEDVPKLVARLDNILAKYTD 624
LE+V LV +D +L K+ D
Sbjct: 1507 LEEVEYLVNMVDELLNKFPD 1526
Score = 41 (19.5 bits), Expect = 2.0e-11, Sum P(5) = 2.0e-11
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 762 MDGFYGVNNSVTLHSSWESGAEEGLG 787
+DGF G + S +S ++ G+G
Sbjct: 1567 VDGFQGQEKDIIFFSCVKSYSKHGIG 1592
Score = 41 (19.5 bits), Expect = 2.0e-11, Sum P(5) = 2.0e-11
Identities = 38/157 (24%), Positives = 68/157 (43%)
Query: 7 SFQSVNRYFESFVFPLLEETRAQLSSSMEKISEAPFAQVVDLEDSKPYGAMLSDVKVDYW 66
SF++V Y E + E +Q+ S+ +DL+ S G M+ V+ +
Sbjct: 950 SFKTVEHYMEVLQPMIFMECWSQIQSTK-----------LDLKFSPVEGIMVERTAVNNF 998
Query: 67 RN-RFSNYSKE--SYKVLPGDILVLADAKPETASDLRRVGRMWTFVSVTKVTEDKNESDT 123
+ S K+ Y + +++ LA K E AS ++ G + F V ++ N
Sbjct: 999 VDIGVSVAPKDLYGYPLYDTEVVSLAFNK-EDASSMK--G-LCCFAKVERIVRQTNG--- 1051
Query: 124 TSTSFKVKASKE--NQIDGANKSLFAIFLTNVTSNTR 158
+ S E N++ G N +L+ + LTN+ + TR
Sbjct: 1052 VLVVLRTLPSMEILNKLQG-NCALWFLKLTNLATFTR 1087
>UNIPROTKB|G4ND47 [details] [associations]
symbol:MGG_00976 "Regulator-nonsense transcripts 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 EMBL:CM001235 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
KO:K14326 RefSeq:XP_003717973.1 ProteinModelPortal:G4ND47
SMR:G4ND47 EnsemblFungi:MGG_00976T0 GeneID:2674784
KEGG:mgr:MGG_00976 Uniprot:G4ND47
Length = 1105
Score = 214 (80.4 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 58/178 (32%), Positives = 94/178 (52%)
Query: 256 TKASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQ 315
+ A ++ CT + R+A + + ++IDE+ Q E E IPL L G + +L+GD Q
Sbjct: 589 SNADVVCCTCVGAGD-PRLAKLKFRNVLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQ 646
Query: 316 LPAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSP 375
L ++ + + +A L +SLFERL LG L++QYRMHP +S FP++ FY+ + +
Sbjct: 647 LGPVIMNKKAAKAGLNQSLFERLVKLGLTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGV 706
Query: 376 NVKEKNYEKRFLPGRMYG-PYSFINVLDGREESIAH--SYRNMVEVFVVMKILLNLYK 430
++++ P + P F + L G EE A SY N E V K++ +K
Sbjct: 707 TIQQRLRRDVDFPWPVADMPMMFWSNL-GNEEISASGTSYLNRTEASNVEKLVTRFFK 763
Score = 40 (19.1 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 998 NEAKHNVLCSELKQLYVAITRTRQRLWIWENMEEFSK 1034
NE++ S+ ++L VA+TR + + I N + SK
Sbjct: 826 NESQGIGFLSDPRRLNVALTRAKYGVVIIGNPKVLSK 862
Score = 38 (18.4 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 744 TTILTMKLFQKEKLHHM---AMDGFYGVNNSVTLHSSWESGAEEGLGETERPILRQLFVT 800
+T+ F+KE + ++D F G + S S +G+G P R+L V
Sbjct: 786 STMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNESQGIGFLSDP--RRLNVA 843
Query: 801 VS 802
++
Sbjct: 844 LT 845
>SGD|S000004685 [details] [associations]
symbol:NAM7 "ATP-dependent RNA helicase of the SFI
superfamily" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IMP] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IGI;IMP] [GO:0008298 "intracellular mRNA localization"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0016567 "protein ubiquitination"
evidence=IMP;IDA;IPI] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005844 "polysome" evidence=TAS] [GO:0003676 "nucleic acid
binding" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;TAS]
[GO:0006449 "regulation of translational termination" evidence=TAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006452 "translational frameshifting" evidence=IMP] [GO:0008186
"RNA-dependent ATPase activity" evidence=TAS] InterPro:IPR003593
InterPro:IPR018999 Pfam:PF09416 SMART:SM00382 SGD:S000004685
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003676 GO:GO:0016567
GO:GO:0030466 EMBL:BK006946 EMBL:Z49259 GO:GO:0005844 GO:GO:0008298
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0004004
GO:GO:0070478 GO:GO:0006449 GeneTree:ENSGT00550000074391
EMBL:X62394 EMBL:M76659 PIR:S23408 RefSeq:NP_013797.1 PDB:2XZL
PDBsum:2XZL ProteinModelPortal:P30771 SMR:P30771 DIP:DIP-2373N
IntAct:P30771 MINT:MINT-492322 STRING:P30771 PaxDb:P30771
PeptideAtlas:P30771 EnsemblFungi:YMR080C GeneID:855104
KEGG:sce:YMR080C CYGD:YMR080c HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL OrthoDB:EOG405W86 EvolutionaryTrace:P30771
NextBio:978431 Genevestigator:P30771 GermOnline:YMR080C
Uniprot:P30771
Length = 971
Score = 208 (78.3 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 56/178 (31%), Positives = 95/178 (53%)
Query: 257 KASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQL 316
KA ++ CT + R+ + + ++IDE+ Q E E IP+ + G + IL+GD QL
Sbjct: 546 KADVVCCTCVGAGD-KRLDTK-FRTVLIDESTQASEPECLIPI-VKGAKQVILVGDHQQL 602
Query: 317 PAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPN 376
++ + +A L +SLFERL +LG L +QYRM+P +S FP++ FY+ + +
Sbjct: 603 GPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVT 662
Query: 377 VKEKNYEKRFLPGRMYG-PYSF-INVLDGREESIAH--SYRNMVEVFVVMKILLNLYK 430
++++ P + G P F N GREE A+ S+ N +E +I+ L++
Sbjct: 663 IEQRTVPNSKFPWPIRGIPMMFWANY--GREEISANGTSFLNRIEAMNCERIITKLFR 718
Score = 44 (20.5 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 458 LWILGNARTLTRKKSVWE-ALVH 479
L ILGN R+L R ++W L+H
Sbjct: 806 LVILGNPRSLARN-TLWNHLLIH 827
>POMBASE|SPAC16C9.06c [details] [associations]
symbol:upf1 "ATP-dependent RNA helicase Upf1"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0002184 "cytoplasmic translational
termination" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006415
"translational termination" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 PomBase:SPAC16C9.06c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0004004 GO:GO:0002184 HOGENOM:HOG000205990
KO:K14326 OMA:MFYEGSL OrthoDB:EOG405W86 PIR:S62476
RefSeq:NP_593080.1 ProteinModelPortal:Q09820 SMR:Q09820
STRING:Q09820 PRIDE:Q09820 EnsemblFungi:SPAC16C9.06c.1
GeneID:2542327 KEGG:spo:SPAC16C9.06c NextBio:20803388
Uniprot:Q09820
Length = 925
Score = 198 (74.8 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 58/171 (33%), Positives = 85/171 (49%)
Query: 258 ASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLP 317
A +I CT + R++ + + ++IDEA Q E E IPL L G + +L+GD QL
Sbjct: 538 AHVICCTCVGAGD-RRISKYKFRSVLIDEATQASEPECMIPLVL-GAKQVVLVGDHQQLG 595
Query: 318 AMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNV 377
+V + A L +SLFERL LG + L +QYRMHP +S FP++ FY+ + +
Sbjct: 596 PVVMNKKVALASLSQSLFERLIILGNSPFRLVVQYRMHPCLSEFPSNTFYEGTLQNGVTT 655
Query: 378 KEKNYEKRFLPG-RMYGPYSFINVLDGREESIAH--SYRNMVEVFVVMKIL 425
E+ P + P F G+EE A S+ N E KI+
Sbjct: 656 SERIARHVDFPWIQPDSPLMFYANF-GQEELSASGTSFLNRTEASTCEKIV 705
Score = 49 (22.3 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 618 ILAKYT--DEFINHCKEK--CIEGNLEVPKTWAAT 648
+LAK+ F+ HCKEK +EG L + ++ T
Sbjct: 806 VLAKHALWYHFVLHCKEKGYLVEGTLNSLQKFSLT 840
>CGD|CAL0001700 [details] [associations]
symbol:orf19.702 species:5476 "Candida albicans" [GO:0003678
"DNA helicase activity" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006449 "regulation of translational termination"
evidence=IEA] InterPro:IPR003593 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00382 CGD:CAL0001700 GO:GO:0005524 GO:GO:0008270
GO:GO:0005622 GO:GO:0017111 eggNOG:COG1112 EMBL:AACQ01000183
EMBL:AACQ01000182 RefSeq:XP_711775.1 RefSeq:XP_711793.1
ProteinModelPortal:Q59PZ8 GeneID:3646609 GeneID:3646623
KEGG:cal:CaO19.702 KEGG:cal:CaO19.8321 Uniprot:Q59PZ8
Length = 1105
Score = 180 (68.4 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 52/165 (31%), Positives = 82/165 (49%)
Query: 275 AMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSL 334
++ ++ ++IDEA Q E + IPL LP ++ +L+GD+ QL S + L SL
Sbjct: 800 SLNNVRVVIIDEATQSSEPTTLIPLALPSVEKLVLVGDQKQLSCF--SLIPN---LSLSL 854
Query: 335 FERLSNLGQAK--HLLSIQYRMHPSISSFPNSYFYDNKIFDSPNVKEKNYEKRFLPGRMY 392
FER+ G K H+L QYRMHP IS FP + FY + D + + E G +
Sbjct: 855 FERVLLNGTYKTPHMLDTQYRMHPEISEFPRTKFYGGLLKDGIDANARQSE-----GVIS 909
Query: 393 GPYSFINVL-DGREESI--------AHSYRNMVEVFVVMKILLNL 428
P F + + RE+S+ ++Y N E+ + ++L L
Sbjct: 910 SPLYFWDTKGNAREQSVRNFLREDGGYTYTNRDEIGYIQQVLRTL 954
Score = 72 (30.4 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 209 LNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVS----MLLDFCFTKASLIFCT 264
LN+SQ + V S L + + ++ GPPGTGKT T+ LLD T L+
Sbjct: 640 LNESQKKGVQSVLNNS-------ITVLQGPPGTGKTSTIYEIILQLLDSLNTYPILV--V 690
Query: 265 ASSSYKLHRVAMEQL 279
A+S+ + +A E+L
Sbjct: 691 AASNIAIDNIA-EKL 704
Score = 47 (21.6 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 18/93 (19%), Positives = 37/93 (39%)
Query: 2 EQIPLSFQSVNRYFESFVFPLLEETRAQLSSSMEKISEAPFAQVVDLEDSKP----YGAM 57
E+ L++ S+N YF+ F + E + S++ S + DL+ + M
Sbjct: 449 EKPKLTYDSMNEYFKEISFNVFLEDQLNNESNIIDSSNFTISWYEDLDKKNNQFQLHIPM 508
Query: 58 LSDVKVDYWRNRFSNYSKESYKVLPGDILVLAD 90
++ + + + K + V L+L D
Sbjct: 509 RPEIIDKFLSQKLKKFKKNPFSVDQAIFLILDD 541
>ZFIN|ZDB-GENE-070424-144 [details] [associations]
symbol:si:ch211-183d5.1 "si:ch211-183d5.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR026855 ZFIN:ZDB-GENE-070424-144
GO:GO:0004386 PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AL935128 IPI:IPI00492493 Ensembl:ENSDART00000144897
Uniprot:F1QAI5
Length = 517
Score = 173 (66.0 bits), Expect = 6.3e-10, Sum P(3) = 6.3e-10
Identities = 41/115 (35%), Positives = 61/115 (53%)
Query: 257 KASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQL 316
K ++ CT SS+ K + + ++IDE A E E+ IPL Q +L+GD Q+
Sbjct: 178 KYDVVLCTCSSALKPELREVMDFRQILIDECAMATEPEAFIPLVSHNPQQIVLLGDHQQI 237
Query: 317 PAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKI 371
+V+ + +SLFER +L ++L QYRMH I SFP+ FYD K+
Sbjct: 238 RPIVQCGHVKNKGMEKSLFERYMDLA---NMLDTQYRMHAEICSFPSDEFYDGKL 289
Score = 62 (26.9 bits), Expect = 6.3e-10, Sum P(3) = 6.3e-10
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 210 NDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLLDFCFTKASLIFCTA 265
N SQ +AV +++ TV I GPPGTGKT V + + F F K + F T+
Sbjct: 2 NMSQKKAVKEAMKKPF-----TV--IQGPPGTGKT-VVGIHIVFQFFKKNKDFMTS 49
Score = 43 (20.2 bits), Expect = 6.3e-10, Sum P(3) = 6.3e-10
Identities = 26/101 (25%), Positives = 44/101 (43%)
Query: 952 KQALVLTIVESKGLEFQ-VIHYTSQCCNSPFKHALFDSTSPGSFPSFNEAKHNVLCSELK 1010
+ V T+++S+G E+ VI T + C++ A P K ++
Sbjct: 384 RNVTVCTVMKSQGSEWPYVIVSTVRSCSTSDIQAY--RVRPHKAWL---GKRLGFVTDAN 438
Query: 1011 QLYVAITRTRQRLWIWENME-----EFSKPMFDYWKKKSLV 1046
Q+ VAITR + L I N + E + D++ +KS V
Sbjct: 439 QVNVAITRAQDGLCILGNSDLLRCCELWDRLLDHYYRKSCV 479
Score = 37 (18.1 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 1290 LVLEEESGNFMDAANIARLRGDIFLAVDLLQKAGCFKE 1327
LV+ E GN AN + +A L++++G E
Sbjct: 322 LVVSTEKGNENSMANTEEAEQAVCVADLLIKQSGVSPE 359
>DICTYBASE|DDB_G0288923 [details] [associations]
symbol:upf1 "regulator of nonsense transcripts 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 dictyBase:DDB_G0288923
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AAFI02000126
GenomeReviews:CM000154_GR GO:GO:0003676 eggNOG:COG1112
GO:GO:0004004 KO:K14326 RefSeq:XP_636490.1
ProteinModelPortal:Q54I89 SMR:Q54I89 STRING:Q54I89
EnsemblProtists:DDB0233746 GeneID:8626873 KEGG:ddi:DDB_G0288923
InParanoid:Q54I89 Uniprot:Q54I89
Length = 1331
Score = 206 (77.6 bits), Expect = 7.7e-10, Sum P(3) = 7.7e-10
Identities = 53/178 (29%), Positives = 91/178 (51%)
Query: 250 LLDFCFTKASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAIL 309
+++ + + + C R++ + ++IDE+ Q E E IPL + G + IL
Sbjct: 671 MMEMAILRKADVICATCVGAGDPRLSQFRFPHILIDESTQASEPECLIPLMM-GAKQVIL 729
Query: 310 IGDECQL-PAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYD 368
+GD QL P ++ V +A L +SLFERL +LG L+IQYRMHPS++ FP++ Y+
Sbjct: 730 VGDHRQLGPVLLCKKVV-DAGLSQSLFERLISLGHHPERLTIQYRMHPSLTEFPSNTSYE 788
Query: 369 NKIFDSPNVKEKNYEKRFLPGRMYGPYSFINVLDGRE-ESIAHSYRNMVEVFVVMKIL 425
++ + +++ + +F + P F N E S S+ N E + KI+
Sbjct: 789 GQLVSELSHTDRDSQSKFPWPQPKDPMFFFNCTGSEEISSSGTSFINTTEASICEKIV 846
Score = 49 (22.3 bits), Expect = 7.7e-10, Sum P(3) = 7.7e-10
Identities = 19/68 (27%), Positives = 37/68 (54%)
Query: 1010 KQLYVAITRTRQRLWIWENMEEFSK-PMFD----YWKKKSLVQVRQLDDSLAQAMQVASS 1064
++L VA+TR R L I N + SK P+++ ++K K+++ L + L Q+ +
Sbjct: 926 RRLNVALTRARFGLIILGNAKVLSKDPLWNSLISHFKNKNVLVEGSLAN-LKQSPVILQK 984
Query: 1065 PEEWKSRG 1072
P++ +G
Sbjct: 985 PKKLYGQG 992
Score = 47 (21.6 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 458 LWILGNARTLTRKKSVWEALV-HDAN 482
L ILGNA+ L+ K +W +L+ H N
Sbjct: 939 LIILGNAKVLS-KDPLWNSLISHFKN 963
Score = 38 (18.4 bits), Expect = 7.7e-10, Sum P(3) = 7.7e-10
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 116 EDKNESDTTSTSFKVKASKENQID---GANKSLFAIFLTNVTSNTRI 159
E++ E D + + SK+ D GAN S FL + N++I
Sbjct: 110 EEEEEDDDEDEEEEDEESKKLNYDSFFGANMSHNMDFLNSQNINSQI 156
Score = 37 (18.1 bits), Expect = 9.7e-10, Sum P(3) = 9.7e-10
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 70 FSNYSKESYKVLPGDILVL 88
FS E +KV+PGD L L
Sbjct: 412 FSRSDLE-FKVVPGDELKL 429
>WB|WBGene00004880 [details] [associations]
symbol:smg-2 species:6239 "Caenorhabditis elegans"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IGI] [GO:0005737 "cytoplasm"
evidence=IEA;IDA;TAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0030538
"embryonic genitalia morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0051721 "protein phosphatase 2A
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
EMBL:AF074017 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016246 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 GO:GO:0040035 eggNOG:COG1112
GO:GO:0004004 GO:GO:0030538 HOGENOM:HOG000205990 KO:K14326
EMBL:FO081800 PIR:T43280 RefSeq:NP_490829.1
ProteinModelPortal:O76512 SMR:O76512 MINT:MINT-255670 STRING:O76512
PaxDb:O76512 GeneID:171696 KEGG:cel:CELE_Y48G8AL.6 UCSC:Y48G8AL.6
CTD:171696 WormBase:Y48G8AL.6 InParanoid:O76512 NextBio:872341
Uniprot:O76512
Length = 1069
Score = 201 (75.8 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 59/177 (33%), Positives = 90/177 (50%)
Query: 258 ASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLP 317
A +I CT SS+ R++ + + ++IDE+ Q E E + + + G++ +L+GD CQL
Sbjct: 584 ADVICCTCSSAADA-RLSKIRTRTVLIDESTQATEPEILVSI-MRGVRQLVLVGDHCQLG 641
Query: 318 AMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNV 377
+V + A L +SLFERL LG L +QYRMHP +S FP++ FYD + + V
Sbjct: 642 PVVICKKAAIAGLSQSLFERLVLLGIRPFRLQVQYRMHPVLSEFPSNVFYDGSLQNG--V 699
Query: 378 KEKNYEKRFLPGRMYGPY--SFINVLDGREESIAH--SYRNMVEVFVVMKILLNLYK 430
E + + P +F G EE A S+ N E V K++ L K
Sbjct: 700 TENDRHMTGVDWHWPKPNKPAFFWHCSGSEELSASGTSFLNRTEAANVEKLVSKLIK 756
Score = 38 (18.4 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 1007 SELKQLYVAITRTRQRLWIWENMEEFSKPMFDYW 1040
S+ ++L VAITR + L + N + ++ D W
Sbjct: 828 SDPRRLNVAITRAKYGLVLVGNAKVLAR--HDLW 859
>UNIPROTKB|E1BQD2 [details] [associations]
symbol:C4H4orf21 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AADN02009328
IPI:IPI00577016 Ensembl:ENSGALT00000019715 Uniprot:E1BQD2
Length = 913
Score = 203 (76.5 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 53/153 (34%), Positives = 85/153 (55%)
Query: 276 MEQLKF--LVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVESSVS-GEACLGR 332
++ LKF +V+DE +Q+ E S +P+ + +L+GD QLP ++ S S E L +
Sbjct: 616 LDTLKFPVVVLDECSQMTEPTSLLPIARFQCEKLVLVGDPKQLPPTIQGSESIHEKGLEQ 675
Query: 333 SLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNVKEKNYEKRFLPGRMY 392
+LF+RL +G LL QYR HP+IS+ N FY+ + D + KE++ +LP +
Sbjct: 676 TLFDRLCLMGHKTILLRTQYRCHPAISAIANELFYEGNLIDGVSEKERSPLLDWLPTLCF 735
Query: 393 GPYSFINVLDGREESIAHSYRNMVEVFVVMKIL 425
YS +N L+ E +S+ NM EV +K +
Sbjct: 736 --YS-VNGLEQIERD--NSFYNMAEVHFTVKFI 763
Score = 42 (19.8 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 1010 KQLYVAITRTRQRLWIWENMEEFSK 1034
K++ VA+TR ++ L I N+ SK
Sbjct: 839 KRMNVALTRAKRHLLIVGNLACLSK 863
Score = 38 (18.4 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 4 IPLSFQSVNRYFESFVFPLLEETRAQLSSSMEKISEA 40
IP FQS Y + F L E L +++ A
Sbjct: 107 IPTEFQSHVHYRQVFKAALTEHLNIMLFELSQRLHSA 143
>DICTYBASE|DDB_G0289529 [details] [associations]
symbol:DDB_G0289529 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002934
InterPro:IPR003593 Pfam:PF01909 SMART:SM00382
dictyBase:DDB_G0289529 GO:GO:0005524 EMBL:AAFI02000141
GO:GO:0017111 eggNOG:COG1112 GO:GO:0016779 RefSeq:XP_636183.1
ProteinModelPortal:Q54HF4 EnsemblProtists:DDB0219440 GeneID:8627170
KEGG:ddi:DDB_G0289529 InParanoid:Q54HF4 ProtClustDB:CLSZ2429765
Uniprot:Q54HF4
Length = 1677
Score = 212 (79.7 bits), Expect = 6.7e-09, Sum P(3) = 6.7e-09
Identities = 62/193 (32%), Positives = 92/193 (47%)
Query: 243 KTKTVSMLLDFCFTKASLIFCTASSSYKLHRVAMEQLK--FLVIDEAAQLKEVESAIPLK 300
K K S ++ AS++F T + S + E ++IDE+ Q E S IPL
Sbjct: 1293 KNKNSSRRINL-IKSASIVFSTLAGSGS--KAIFENFSPDIVLIDESTQSSEPTSIIPLS 1349
Query: 301 LPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISS 360
L ++ IL+GD QLP + S + L SLFERL+ + L+ QYRMHP S
Sbjct: 1350 LGSVKKLILVGDPVQLPPTIFSKQGADCGLKISLFERLAKSIDVQ-FLNTQYRMHPVTSK 1408
Query: 361 FPNSYFYDNKIFDSPNVKEKNYEK-RFLPGRMYGPYSFINVLDGREESIAHSYRNMVE-- 417
F + FY+ + D NV +Y +F +GP F ++ ++ I S N E
Sbjct: 1409 FISEEFYNGTLKDGENVSIDSYNNCKFHFDPSFGPMKFFDLPKSNQKVIKKSIMNQDEID 1468
Query: 418 -VFVVMKILLNLY 429
VF ++K L+ Y
Sbjct: 1469 KVFTLIKELIEKY 1481
Score = 38 (18.4 bits), Expect = 6.7e-09, Sum P(3) = 6.7e-09
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 109 VSVTKV-TEDKNESDTTSTSFKVKA 132
+SV + T+ N +D + + K+KA
Sbjct: 925 ISVHSIGTKKSNNNDNNNNNTKIKA 949
Score = 37 (18.1 bits), Expect = 6.7e-09, Sum P(3) = 6.7e-09
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 1007 SELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKK 1042
S+ +++ VA+TR + L++ + +K + W+K
Sbjct: 1549 SDRRRINVALTRAKLGLYVIGTYKVLAKD--NTWEK 1582
>UNIPROTKB|E1BAS6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:DAAA02032276 EMBL:DAAA02032274 EMBL:DAAA02032275
IPI:IPI00842535 Ensembl:ENSBTAT00000042924 Uniprot:E1BAS6
Length = 2662
Score = 160 (61.4 bits), Expect = 8.5e-09, Sum P(4) = 8.5e-09
Identities = 64/203 (31%), Positives = 98/203 (48%)
Query: 245 KTVSMLLDFCFTKASLIFCTASSSYKLHRVAMEQ----LKF--LVIDEAAQLKEVESAIP 298
KT S+++ ++ +I CT S+S L A + + F +++DEA Q EVE+ P
Sbjct: 2129 KTQSIII----LESHIICCTLSTSGGLLLEAAFRGQGGVPFSCVIVDEAGQSCEVETLTP 2184
Query: 299 LKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERLSNL----------GQAKHL- 347
L + +L+GD QLP V S + + +S+ R L G+ L
Sbjct: 2185 L-IHRCNKLVLVGDPKQLPPTVISVKAQDYGYDQSMMARFHKLLEESVEHNMIGRLPVLQ 2243
Query: 348 LSIQYRMHPSISSFPNSYFYDNKIFDSPNVKEKNYEKRFLPGRMYGPYSFINVLDGREES 407
L+IQYRMHP I FP+SY YD + + + + P + PY +V DG E
Sbjct: 2244 LTIQYRMHPDICLFPSSYIYDGILRTNRGTETSRCSSDW-P---FQPYLVFDVGDGLERR 2299
Query: 408 IAHSYRNMVEVFVVMKILLNLYK 430
SY N+ E+ +VM+ L+ L K
Sbjct: 2300 DNDSYVNVQEIKLVME-LIKLIK 2321
Score = 82 (33.9 bits), Expect = 8.5e-09, Sum P(4) = 8.5e-09
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 210 NDSQAQAV-LSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLL 251
N+ Q +A+ +C H A + LI GPPGTGK+KT+ +L
Sbjct: 1925 NEDQKKAIETACAMVKHSPSVAKICLIHGPPGTGKSKTIVGIL 1967
Score = 55 (24.4 bits), Expect = 8.5e-09, Sum P(4) = 8.5e-09
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 456 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNAEDE 493
+ L+ILG+ RTL + W L+ DA R D+
Sbjct: 2407 YSLFILGHLRTLVENRH-WYHLIQDAQKRGAIIKTCDK 2443
Score = 49 (22.3 bits), Expect = 0.00011, Sum P(5) = 0.00011
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 184 EDCELCPV---QSDGIWNDIFGPSLSSTLNDSQAQAVLSCLRRTHCDHKATVELIWGP 238
ED +LC ++D + I G + +Q L L T C +K VE + P
Sbjct: 1493 EDMDLCSQIERENDKLIEVIHGKDTVQGEEECVSQPQLESLSSTKCKYKDCVETLKNP 1550
Score = 47 (21.6 bits), Expect = 8.5e-09, Sum P(4) = 8.5e-09
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 3 QIPLSFQSVNRYFESFVFPLL 23
++P+ FQ YF F FPL+
Sbjct: 1722 RVPIRFQDCGDYFNVF-FPLM 1741
Score = 47 (21.6 bits), Expect = 8.4e-08, Sum P(5) = 8.4e-08
Identities = 21/80 (26%), Positives = 33/80 (41%)
Query: 55 GAMLSDVKVDYWRNRFSNYSKESYKVLPGDILVLADAKPETASDLRRVGRMWTFVSVTKV 114
G L D K+ ++FS+ +E L D++ + DL ++ + SVTK
Sbjct: 916 GHELRDRKISRSTDQFSSNLREQDLSSSPQPDTLTDSQVDR--DLHKLSLI-AQASVTKF 972
Query: 115 TEDKNESDTTSTSFKVKASK 134
D E + KVK K
Sbjct: 973 PSDSTEKSLSQIQRKVKDEK 992
Score = 37 (18.1 bits), Expect = 8.4e-08, Sum P(5) = 8.4e-08
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 15 FESFVFPLLEETRAQLSSSMEK 36
F+ VF LLE SS +EK
Sbjct: 197 FKVIVFLLLENPDIYTSSVLEK 218
>UNIPROTKB|F1PHA4 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006302 "double-strand break repair"
evidence=IEA] InterPro:IPR026121 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:AAEX03006816 EMBL:AAEX03006817 Ensembl:ENSCAFT00000031656
Uniprot:F1PHA4
Length = 2531
Score = 162 (62.1 bits), Expect = 8.6e-09, Sum P(4) = 8.6e-09
Identities = 52/155 (33%), Positives = 75/155 (48%)
Query: 282 LVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERLSNL 341
+++DEA Q EVE+ PL + IL+GD QLP V S + E +S+ R L
Sbjct: 2201 VIVDEAGQSCEVETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFYKL 2259
Query: 342 --GQAKH---------LLSIQYRMHPSISSFPNSYFYDNKIFDSPNVKEKNYEKRFLPGR 390
+H L++QYRMHP I FP++Y Y N+ + E N P
Sbjct: 2260 LEDNVEHNMIGRLPVLQLTVQYRMHPDICLFPSNYVY-NRSLKTNRQTETNRCSSDWP-- 2316
Query: 391 MYGPYSFINVLDGREESIAHSYRNMVEVFVVMKIL 425
+ PY +V DG E SY N+ E+ +VM+I+
Sbjct: 2317 -FQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEII 2350
Score = 76 (31.8 bits), Expect = 8.6e-09, Sum P(4) = 8.6e-09
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 210 NDSQAQAVLSCLRRT-HCDHKATVELIWGPPGTGKTKTVSMLL 251
N+ Q +A+ + H A + LI GPPGTGK+KT+ LL
Sbjct: 1958 NEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLL 2000
Score = 60 (26.2 bits), Expect = 8.6e-09, Sum P(4) = 8.6e-09
Identities = 23/73 (31%), Positives = 33/73 (45%)
Query: 456 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNAEDEE---DLGKAILGVKKELDEFDD 512
+ L+ILG+ RTL + W L+ DA R D+ D K IL +K L
Sbjct: 2440 YSLFILGHLRTLMENQH-WNHLIQDAQKRGAIIKTCDKNYRHDAAK-ILKLKPVLQR--S 2495
Query: 513 LLNPGSILFRSQR 525
L +P +I + R
Sbjct: 2496 LTHPPAIAPEASR 2508
Score = 45 (20.9 bits), Expect = 8.6e-09, Sum P(4) = 8.6e-09
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 4 IPLSFQSVNRYFESFVFPLL 23
+P+ FQ YF F FPL+
Sbjct: 1756 VPVRFQDCGDYFNVF-FPLM 1774
Score = 42 (19.8 bits), Expect = 6.3e-06, Sum P(3) = 6.3e-06
Identities = 14/53 (26%), Positives = 21/53 (39%)
Query: 184 EDCELCPVQSDG---IWNDIFGPSLSSTLNDSQAQAVLSCLRRTHCDHKATVE 233
ED +LC +G + + + DS Q L+ T C +K VE
Sbjct: 1526 EDMDLCSQMENGNEKLIEIVHRRDTAQVEEDSVGQPQLASWSSTKCKYKDCVE 1578
>MGI|MGI:2443480 [details] [associations]
symbol:Setx "senataxin" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR026121 MGI:MGI:2443480 GO:GO:0005524 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0007623 GO:GO:0006302
GO:GO:0004386 eggNOG:COG1112 GO:GO:0006369 KO:K10706 EMBL:AL772379
GeneTree:ENSGT00580000081652 CTD:23064 HOVERGEN:HBG108476
OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15 EMBL:AL845267
EMBL:AK044730 EMBL:AK048354 EMBL:AK077911 EMBL:BC046382
EMBL:BC058109 EMBL:BC079604 EMBL:AK129177 EMBL:BK001523
IPI:IPI00421108 IPI:IPI00626271 RefSeq:NP_932150.2 UniGene:Mm.41867
ProteinModelPortal:A2AKX3 SMR:A2AKX3 DIP:DIP-56995N IntAct:A2AKX3
STRING:A2AKX3 PhosphoSite:A2AKX3 PaxDb:A2AKX3 PRIDE:A2AKX3
Ensembl:ENSMUST00000061578 Ensembl:ENSMUST00000129544 GeneID:269254
KEGG:mmu:269254 UCSC:uc008izm.1 InParanoid:A2AKX3 NextBio:392760
Bgee:A2AKX3 CleanEx:MM_SETX Genevestigator:A2AKX3 Uniprot:A2AKX3
Length = 2646
Score = 160 (61.4 bits), Expect = 1.0e-08, Sum P(4) = 1.0e-08
Identities = 54/155 (34%), Positives = 76/155 (49%)
Query: 282 LVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERLSNL 341
+++DEA Q EVE+ PL + IL+GD QLP V S + E +S+ R L
Sbjct: 2154 VIVDEAGQSCEVETLSPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCKL 2212
Query: 342 ----------GQAKHL-LSIQYRMHPSISSFPNSYFYDNKIFDSPNVKEKNYEKRFLPGR 390
G+ L L+IQYRMHP I FP++Y Y NK + + E P
Sbjct: 2213 LEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVY-NKNLKTNRLTESIRCSSEWP-- 2269
Query: 391 MYGPYSFINVLDGREESIAHSYRNMVEVFVVMKIL 425
+ PY +V DG E SY N+ E+ +VM+I+
Sbjct: 2270 -FQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII 2303
Score = 76 (31.8 bits), Expect = 1.0e-08, Sum P(4) = 1.0e-08
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 210 NDSQAQAVLSCLRRT-HCDHKATVELIWGPPGTGKTKTVSMLL 251
N+ Q +A+ + H A + LI GPPGTGK+KT+ LL
Sbjct: 1911 NEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLL 1953
Score = 58 (25.5 bits), Expect = 1.0e-08, Sum P(4) = 1.0e-08
Identities = 27/91 (29%), Positives = 37/91 (40%)
Query: 456 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNAED---EEDLGKAILGVKKELDEFDD 512
+ L+ILG+ RTL + W L+ DA R D D K IL +K L
Sbjct: 2393 YSLFILGHLRTLMENQH-WYELIQDAQKRGAIIKTSDPNYRHDAMK-ILKLKPVLQR--S 2448
Query: 513 LLNPGSILFRSQRWKVNFSENFLKSFRKLTS 543
L +P + + R + N L S TS
Sbjct: 2449 LTHPPATAPEAPRPQGGLPSNRLDSGLATTS 2479
Score = 49 (22.3 bits), Expect = 1.0e-08, Sum P(4) = 1.0e-08
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 71 SNYSKE-SYKVLPGDILVLADAKPETASDLRRVGRMWTFVSVTKVTEDKNESDTTSTSFK 129
S SK+ S+++ GD L A +A+ R G++ +S + ED++E + +S+
Sbjct: 966 SGLSKQNSFQLQKGDKRCLT-ANQNSAATCR--GQV-IVISDSDEEEDEDEDERSSSEEN 1021
Query: 130 VKASK 134
+K SK
Sbjct: 1022 IKQSK 1026
Score = 40 (19.1 bits), Expect = 7.9e-08, Sum P(4) = 7.9e-08
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 4 IPLSFQSVNRYFESFVFPLL 23
+P+ FQ YF F+ PL+
Sbjct: 1714 VPVRFQDCAEYFNVFL-PLI 1732
>CGD|CAL0006154 [details] [associations]
symbol:orf19.6199 species:5476 "Candida albicans" [GO:0043141
"ATP-dependent 5'-3' DNA helicase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IEA] [GO:0033203 "DNA helicase
A complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR004483 SMART:SM00382
CGD:CAL0006154 GO:GO:0005524 GO:GO:0003677 GO:GO:0017111
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000038
EMBL:AACQ01000037 TIGRFAMs:TIGR00376 RefSeq:XP_718706.1
RefSeq:XP_718790.1 ProteinModelPortal:Q5AAW1 STRING:Q5AAW1
GeneID:3639532 GeneID:3639630 KEGG:cal:CaO19.13579
KEGG:cal:CaO19.6199 Uniprot:Q5AAW1
Length = 719
Score = 136 (52.9 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 39/112 (34%), Positives = 59/112 (52%)
Query: 282 LVIDEAAQLKEVESAIPLKLPG-IQHAILIGDECQLPAMVE----------SSVSGEACL 330
++IDE +Q E + IPL L + ++ GD QLP ++ SS S + L
Sbjct: 408 IIIDEVSQSLEPQCWIPLLLSNRFKRLVIAGDNMQLPPTIKTQKSNSSSPSSSSSSASIL 467
Query: 331 GRSLFERLSNL--GQA-KHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNVKE 379
+LF+RL G+ K LL +QYRM+ SI FP+ YDN++ +V+E
Sbjct: 468 ATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQLKCDDSVRE 519
Score = 88 (36.0 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 55/226 (24%), Positives = 99/226 (43%)
Query: 92 KPETAS-DLRRVGRMWTFVSVTKVTEDKNESDTTSTSFKVKASKENQIDGANKSLFAIFL 150
K E+ + D VG + V+ T + ++T S K+ N D A ++ + L
Sbjct: 107 KEESQTQDQSDVGIEAVVIKVSTQTISISVDESTDDS-KILQYYNNTNDSAR--MWLVKL 163
Query: 151 TNVTSNTRIWNSLHMSGNLKIIKELLCTD--SVVKEDCELCPVQSDGIWNDIFGPS--LS 206
TN + R+ ++ + +KE D ++ + + P +S+G N+ G +
Sbjct: 164 TNSITYKRMITTMD---KVLAMKESDKNDIHKILLGESQYIP-KSNGTSNNNNGEINFFN 219
Query: 207 STLNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLLDFCFTKASLIFCTAS 266
LN SQ QA+ + D T+ I GPPGTGKT T+ L+ +K +
Sbjct: 220 DKLNASQRQAIDFAIN----DSNITI--IHGPPGTGKTYTLIELIQQLTSKGEKVLVCGP 273
Query: 267 SSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKL--PGIQHAILI 310
S+ + + +E+L D+ +K + P +L +QH++ I
Sbjct: 274 SNISVDTI-LERLG----DKYEPMKLIRIGHPARLLMKNLQHSLEI 314
Score = 48 (22.0 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 998 NEAKHNVLCSELKQLYVAITRTRQRLWI---WENMEEFSKPMFDYWKK 1042
N+++ SE ++L VA+TR +++L + E M + W K
Sbjct: 646 NDSREIGFLSEQRRLNVAMTRPKRQLCVVGDLELMNQSGNKFLQSWSK 693
>UNIPROTKB|Q5AAW1 [details] [associations]
symbol:HCS1 "Putative uncharacterized protein HCS1"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR004483 SMART:SM00382 CGD:CAL0006154 GO:GO:0005524
GO:GO:0003677 GO:GO:0017111 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AACQ01000038 EMBL:AACQ01000037
TIGRFAMs:TIGR00376 RefSeq:XP_718706.1 RefSeq:XP_718790.1
ProteinModelPortal:Q5AAW1 STRING:Q5AAW1 GeneID:3639532
GeneID:3639630 KEGG:cal:CaO19.13579 KEGG:cal:CaO19.6199
Uniprot:Q5AAW1
Length = 719
Score = 136 (52.9 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 39/112 (34%), Positives = 59/112 (52%)
Query: 282 LVIDEAAQLKEVESAIPLKLPG-IQHAILIGDECQLPAMVE----------SSVSGEACL 330
++IDE +Q E + IPL L + ++ GD QLP ++ SS S + L
Sbjct: 408 IIIDEVSQSLEPQCWIPLLLSNRFKRLVIAGDNMQLPPTIKTQKSNSSSPSSSSSSASIL 467
Query: 331 GRSLFERLSNL--GQA-KHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNVKE 379
+LF+RL G+ K LL +QYRM+ SI FP+ YDN++ +V+E
Sbjct: 468 ATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQLKCDDSVRE 519
Score = 88 (36.0 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 55/226 (24%), Positives = 99/226 (43%)
Query: 92 KPETAS-DLRRVGRMWTFVSVTKVTEDKNESDTTSTSFKVKASKENQIDGANKSLFAIFL 150
K E+ + D VG + V+ T + ++T S K+ N D A ++ + L
Sbjct: 107 KEESQTQDQSDVGIEAVVIKVSTQTISISVDESTDDS-KILQYYNNTNDSAR--MWLVKL 163
Query: 151 TNVTSNTRIWNSLHMSGNLKIIKELLCTD--SVVKEDCELCPVQSDGIWNDIFGPS--LS 206
TN + R+ ++ + +KE D ++ + + P +S+G N+ G +
Sbjct: 164 TNSITYKRMITTMD---KVLAMKESDKNDIHKILLGESQYIP-KSNGTSNNNNGEINFFN 219
Query: 207 STLNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLLDFCFTKASLIFCTAS 266
LN SQ QA+ + D T+ I GPPGTGKT T+ L+ +K +
Sbjct: 220 DKLNASQRQAIDFAIN----DSNITI--IHGPPGTGKTYTLIELIQQLTSKGEKVLVCGP 273
Query: 267 SSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKL--PGIQHAILI 310
S+ + + +E+L D+ +K + P +L +QH++ I
Sbjct: 274 SNISVDTI-LERLG----DKYEPMKLIRIGHPARLLMKNLQHSLEI 314
Score = 48 (22.0 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 998 NEAKHNVLCSELKQLYVAITRTRQRLWI---WENMEEFSKPMFDYWKK 1042
N+++ SE ++L VA+TR +++L + E M + W K
Sbjct: 646 NDSREIGFLSEQRRLNVAMTRPKRQLCVVGDLELMNQSGNKFLQSWSK 693
>RGD|1565575 [details] [associations]
symbol:Setx "senataxin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=IEA;ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=ISO] [GO:0007623 "circadian rhythm"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR026121 RGD:1565575 GO:GO:0006302 PANTHER:PTHR10887:SF15
IPI:IPI00560336 Ensembl:ENSRNOT00000018281 UCSC:RGD:1565575
ArrayExpress:F1M0E2 Uniprot:F1M0E2
Length = 380
Score = 160 (61.4 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 53/155 (34%), Positives = 77/155 (49%)
Query: 282 LVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERLSNL 341
+++DEA Q EVE+ PL + +L+GD QLP V S + E +S+ R L
Sbjct: 27 VIVDEAGQSCEVETLSPL-IHRCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMARFCKL 85
Query: 342 ----------GQAKHL-LSIQYRMHPSISSFPNSYFYDNKIFDSPNVKEKNYEKRFLPGR 390
G+ L L+IQYRMHP I FP++Y Y NK + + E P
Sbjct: 86 LEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVY-NKNLKTNRLTETIRCSSEWP-- 142
Query: 391 MYGPYSFINVLDGREESIAHSYRNMVEVFVVMKIL 425
+ PY +V DG E+ SY N+ E+ +VM+I+
Sbjct: 143 -FQPYLVFDVGDGSEQRDNDSYINVQEIKLVMEII 176
Score = 53 (23.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 456 HCLWILGNARTLTRKKSVWEALVHDANAR 484
+ L+ILG+ RTL + W L+ DA R
Sbjct: 321 YSLFILGHLRTLMENQH-WYELIQDAQKR 348
>UNIPROTKB|F1S0U6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
KO:K10706 GeneTree:ENSGT00580000081652 CTD:23064 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:CU550727 EMBL:CU914573
RefSeq:XP_003353743.1 UniGene:Ssc.45527 Ensembl:ENSSSCT00000006294
GeneID:100511239 KEGG:ssc:100511239 Uniprot:F1S0U6
Length = 2661
Score = 157 (60.3 bits), Expect = 2.7e-08, Sum P(4) = 2.7e-08
Identities = 50/155 (32%), Positives = 78/155 (50%)
Query: 282 LVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERLSNL 341
+++DEA Q EVE+ PL + +L+GD QLP V S + + +S+ R L
Sbjct: 2172 VIVDEAGQSCEVETLTPL-IHRCNKLVLVGDPKQLPPTVISMKAQDYGYDQSMMARFYKL 2230
Query: 342 ----------GQAKHL-LSIQYRMHPSISSFPNSYFYDNKIFDSPNVKEKNYEKRFLPGR 390
G+ L L++QYRMHP I FP++Y Y N+ + ++ E + P
Sbjct: 2231 LEENVEHNVIGRLPILQLTVQYRMHPDICLFPSNYIY-NRNLKTNSLTEASRCSSDWP-- 2287
Query: 391 MYGPYSFINVLDGREESIAHSYRNMVEVFVVMKIL 425
+ PY +V DG E SY N+ E+ +VM+I+
Sbjct: 2288 -FQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEII 2321
Score = 76 (31.8 bits), Expect = 2.7e-08, Sum P(4) = 2.7e-08
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 210 NDSQAQAVLSCLRRT-HCDHKATVELIWGPPGTGKTKTVSMLL 251
N+ Q +A+ + H A + LI GPPGTGK+KT+ LL
Sbjct: 1929 NEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLL 1971
Score = 60 (26.2 bits), Expect = 2.7e-08, Sum P(4) = 2.7e-08
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 456 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNAEDE 493
+ L+ILG+ RTL R+ W L+ DA R D+
Sbjct: 2411 YSLFILGHLRTL-RENDHWNQLIEDAQKRGAIIKTCDK 2447
Score = 49 (22.3 bits), Expect = 5.2e-05, Sum P(4) = 5.2e-05
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 184 EDCELCPVQSDG---IWNDIFGPSLSSTLNDSQAQAVLSCLRRTHCDHKATVE 233
ED +LC +G + + G DS+++ L L C +K VE
Sbjct: 1498 EDMDLCSQMEEGNAQLIEVVHGKDTVQVEEDSRSRPQLESLSSAKCKYKDCVE 1550
Score = 46 (21.3 bits), Expect = 2.7e-08, Sum P(4) = 2.7e-08
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 3 QIPLSFQSVNRYFESFVFPLL 23
++P+ FQ YF F FPL+
Sbjct: 1727 RVPVRFQDCGDYFSVF-FPLM 1746
Score = 41 (19.5 bits), Expect = 1.9e-06, Sum P(4) = 1.9e-06
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 1007 SELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKK 1042
+ L++L V ITR + L+I ++ + D+W +
Sbjct: 2397 ASLQRLNVTITRAKYSLFILGHLRTLREN--DHWNQ 2430
Score = 39 (18.8 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 16/77 (20%), Positives = 32/77 (41%)
Query: 58 LSDVKVDYWRNRFSNYSKESYKVLPGDILVLADAKPETASDLRRVGRMWTFVSVTKVTED 117
L+D ++ ++F + +E + L D++ + DL + + S TK D
Sbjct: 920 LTDKEISKSTSQFCSVLREQTPGISPKSDTLTDSQVDR--DLHKYSLL-AQASATKFPSD 976
Query: 118 KNESDTTSTSFKVKASK 134
+ ++ KVK K
Sbjct: 977 STQKSSSQLQRKVKDEK 993
>UNIPROTKB|Q6ZU11 [details] [associations]
symbol:Q6ZU11 "Uncharacterized protein FLJ44066"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0016021 GO:GO:0008270
eggNOG:COG1112 UniGene:Hs.713663 EMBL:AK126054 EMBL:AL137700
IPI:IPI00300207 IPI:IPI00880006 PIR:T46441 RefSeq:NP_060862.3
UniGene:Hs.380346 ProteinModelPortal:Q6ZU11 SMR:Q6ZU11
PhosphoSite:Q6ZU11 DMDM:74711848 PaxDb:Q6ZU11 PRIDE:Q6ZU11
GeneID:55345 KEGG:hsa:55345 CTD:55345 HPA:HPA030706
neXtProt:NX_Q6ZU11 PharmGKB:PA144596502 HOGENOM:HOG000155510
InParanoid:Q6ZU11 PhylomeDB:Q6ZU11 GenomeRNAi:55345 NextBio:59679
ArrayExpress:Q6ZU11 Bgee:Q6ZU11 Genevestigator:Q6ZU11
Uniprot:Q6ZU11
Length = 926
Score = 179 (68.1 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 49/156 (31%), Positives = 79/156 (50%)
Query: 276 MEQLKF--LVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVESS-VSGEACLGR 332
M LKF +V+DE +Q+ E S +P+ + IL+GD QLP ++ S + E L +
Sbjct: 620 MNDLKFPVVVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQ 679
Query: 333 SLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNVKEKNYEKRFLPGRMY 392
+LF+RL +G LL QYR HP+IS+ N FY + + E++ +LP
Sbjct: 680 TLFDRLCLMGHKPILLRTQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLEWLP---- 735
Query: 393 GPYSFINVLDGREESIAHSYRNMVEVFVVMKILLNL 428
F NV + +S+ N+ E +K++ +L
Sbjct: 736 -TLCFYNVKGLEQIERDNSFHNVAEATFTLKLIQSL 770
Score = 42 (19.8 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 4 IPLSFQSVNRYFESFVFPLLEETRAQLSSSMEKISEA 40
IP FQS Y ++F L+E L + + +A
Sbjct: 108 IPAVFQSPAHYKQTFTSCLIEHLNILLFGLAQNLQKA 144
>SGD|S000000978 [details] [associations]
symbol:ECM32 "DNA dependent ATPase/DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003678
"DNA helicase activity" evidence=IDA] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0006449 "regulation of translational
termination" evidence=IMP] [GO:0005844 "polysome" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] SGD:S000000978 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 GO:GO:0003723 EMBL:BK006939 GO:GO:0005844
eggNOG:COG1112 GeneTree:ENSGT00700000104467 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 EMBL:U18922 GO:GO:0003724 PIR:S30862
RefSeq:NP_011103.1 ProteinModelPortal:P32644 SMR:P32644
DIP:DIP-5404N IntAct:P32644 MINT:MINT-499764 STRING:P32644
PaxDb:P32644 PeptideAtlas:P32644 EnsemblFungi:YER176W GeneID:856923
KEGG:sce:YER176W CYGD:YER176w HOGENOM:HOG000094475 OMA:KDTPRGT
OrthoDB:EOG4P8JS8 NextBio:983389 Genevestigator:P32644
GermOnline:YER176W GO:GO:0006449 Uniprot:P32644
Length = 1121
Score = 194 (73.4 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 55/176 (31%), Positives = 90/176 (51%)
Query: 256 TKASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQ 315
+++ +IF T ++ +++ +++DEA Q E + +PL LPGI++ + +GDE Q
Sbjct: 791 SQSQIIFTTNIAAGGRELKVIKECPVVIMDEATQSSEASTLVPLSLPGIRNFVFVGDEKQ 850
Query: 316 LPAMVESSVSGEACLGRSLFERLSNLGQAKH--LLSIQYRMHPSISSFPNSYFYDNKIFD 373
L SS S L SLFER+ + G K+ +L QYRMHP IS FP Y+ ++ D
Sbjct: 851 L-----SSFSNIPQLETSLFERVLSNGTYKNPLMLDTQYRMHPKISEFPIKKIYNGELKD 905
Query: 374 SPNVKEKNYEKRFLPGRMY----GPYSFINVLDGREESIAHSYRNMVEVFVVMKIL 425
++K + P Y GP S V + + + +Y N E ++KI+
Sbjct: 906 GVTDEQKAWPGVQHPLFFYQCDLGPES--RVRSTQRDIVGFTYENKHECVEIVKII 959
Score = 38 (18.4 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 757 LHHMAMDGFYGVNNSVTLHSSWESGAEEGLG 787
LH +D F G S + S + E +G
Sbjct: 1036 LHVATVDSFQGHEKSFIIFSCVRNNTENKIG 1066
Score = 37 (18.1 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 6 LSFQSVNRYFESFVFPLLEETRAQ 29
LS+ +N Y + F L E + +
Sbjct: 474 LSYPDLNTYLNDYSFALFLEQKLE 497
>POMBASE|SPCC737.07c [details] [associations]
symbol:SPCC737.07c "DNA polymerase alpha-associated DNA
helicase A (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006273
"lagging strand elongation" evidence=ISO] [GO:0033203 "DNA helicase
A complex" evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=ISO] [GO:0043596 "nuclear replication
fork" evidence=IC] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=ISO] InterPro:IPR003593 SMART:SM00382
PomBase:SPCC737.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG1112 GO:GO:0006273
GO:GO:0043141 PIR:T41580 RefSeq:NP_588369.1
ProteinModelPortal:O94247 STRING:O94247 EnsemblFungi:SPCC737.07c.1
GeneID:2539412 KEGG:spo:SPCC737.07c HOGENOM:HOG000185831
OMA:ERTIFLE OrthoDB:EOG444PTN NextBio:20800576 GO:GO:0033203
Uniprot:O94247
Length = 660
Score = 164 (62.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 54/145 (37%), Positives = 78/145 (53%)
Query: 243 KTKTVSMLLDFCFTKASLIFCTASSSYKLHRVAMEQLK---F--LVIDEAAQLKEVESAI 297
+ KTV+ ++ + + ++FCT LH QLK F ++IDEA+Q E + I
Sbjct: 352 EAKTVANIV----SASKVVFCT------LHGAGSRQLKGQRFDAVIIDEASQALEPQCWI 401
Query: 298 PLKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERL-SNLGQ-AKHLLSIQYRMH 355
PL G+ IL GD QL V+S + S+FERL + G K L+IQYRMH
Sbjct: 402 PLL--GMNKVILAGDHMQLSPNVQSK---RPYI--SMFERLVKSQGDLVKCFLNIQYRMH 454
Query: 356 PSISSFPNSYFYDNKIFDSPNVKEK 380
IS FP+ FYD+K+ + VK++
Sbjct: 455 ELISKFPSDTFYDSKLVPAEEVKKR 479
Score = 50 (22.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 21/97 (21%), Positives = 43/97 (44%)
Query: 946 ISNYVGKQALVLTIVESKGLEFQVIHYTSQCCNSPFKHALFDSTSPGSFPSFNEAKHNVL 1005
++ Y + AL+ +++ KG+E ++ K A+ S N+ +
Sbjct: 552 VTPYNAQVALIRQLLKEKGIEVEMGSVDK--VQGREKEAIIFSLVRS-----NDVREVGF 604
Query: 1006 CSELKQLYVAITRTRQRLWIW--ENMEEFSKPMFDYW 1040
+E ++L VAITR ++ L + N +++ F W
Sbjct: 605 LAEKRRLNVAITRPKRHLCVIGDSNTVKWASEFFHQW 641
>TAIR|locus:2056896 [details] [associations]
symbol:AT2G03270 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AC005313 EMBL:AC006284 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 UniGene:At.10455 UniGene:At.71239 EMBL:AY045820
EMBL:AY091361 IPI:IPI00521943 PIR:T02699 RefSeq:NP_565299.1
ProteinModelPortal:O81047 SMR:O81047 STRING:O81047 PaxDb:O81047
PRIDE:O81047 EnsemblPlants:AT2G03270.1 GeneID:814856
KEGG:ath:AT2G03270 TAIR:At2g03270 InParanoid:O81047 OMA:GHPSRVS
PhylomeDB:O81047 ProtClustDB:CLSN2687941 ArrayExpress:O81047
Genevestigator:O81047 Uniprot:O81047
Length = 639
Score = 171 (65.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 47/134 (35%), Positives = 71/134 (52%)
Query: 240 GTGKTKTVSMLLDFCFTKASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPL 299
G + K + + A +I T + + ++ ++IDE AQ EV I L
Sbjct: 325 GKEERKRQQLAVSDVIKNADVILTTLTGALT-RKLDNRTFDLVIIDEGAQALEVACWIAL 383
Query: 300 KLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERLSNL-G-QAKHLLSIQYRMHPS 357
L G IL GD QLP ++S+ + LGR+LFERL++L G + K +L++QYRMH
Sbjct: 384 -LKG-SRCILAGDHLQLPPTIQSAEAERKGLGRTLFERLADLYGDEIKSMLTVQYRMHEL 441
Query: 358 ISSFPNSYFYDNKI 371
I ++ + YDNKI
Sbjct: 442 IMNWSSKELYDNKI 455
Score = 42 (19.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 753 QKEKLHHM---AMDGFYGVNNSVTLHSSWESGAEEGLGETERPILRQLFVTVSPKLCFAV 809
++EKL M +DGF G + S S +++ +G + + VT S + C V
Sbjct: 547 KEEKLKDMEISTVDGFQGREKEAIIISMVRSNSKKEVGFLKDQRRMNVAVTRSRRQCCIV 606
Score = 41 (19.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 13/50 (26%), Positives = 27/50 (54%)
Query: 998 NEAKHNVLCSELKQLYVAITRTRQRLWI---WENM--EEFSKPMFDYWKK 1042
N K + +++ VA+TR+R++ I E + + F K M +Y+++
Sbjct: 578 NSKKEVGFLKDQRRMNVAVTRSRRQCCIVCDTETVSSDAFLKRMIEYFEE 627
>UNIPROTKB|Q7Z333 [details] [associations]
symbol:SETX "Probable helicase senataxin" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IC] [GO:0003678 "DNA helicase
activity" evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IDA] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR026121 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0008219 GO:GO:0006396 GO:GO:0006302 Orphanet:803
eggNOG:COG1112 GO:GO:0003678 KO:K10706 EMBL:AL159997 Orphanet:64753
EMBL:AY362728 EMBL:BX537849 EMBL:BX538166 EMBL:CR749249
EMBL:AL353701 EMBL:BC032600 EMBL:BC032622 EMBL:BC078166
EMBL:BC106017 EMBL:BC137350 EMBL:AB014525 EMBL:AK001456
EMBL:AK022902 IPI:IPI00142538 IPI:IPI00646645 IPI:IPI00719643
RefSeq:NP_055861.3 UniGene:Hs.460317 ProteinModelPortal:Q7Z333
SMR:Q7Z333 IntAct:Q7Z333 STRING:Q7Z333 PhosphoSite:Q7Z333
DMDM:296453021 PaxDb:Q7Z333 PRIDE:Q7Z333 Ensembl:ENST00000224140
Ensembl:ENST00000372169 Ensembl:ENST00000393220
Ensembl:ENST00000436441 GeneID:23064 KEGG:hsa:23064 UCSC:uc004cbj.3
UCSC:uc004cbk.3 UCSC:uc010mzt.3 CTD:23064 GeneCards:GC09M135136
HGNC:HGNC:445 HPA:HPA024105 MIM:602433 MIM:606002 MIM:608465
neXtProt:NX_Q7Z333 PharmGKB:PA24751 HOVERGEN:HBG108476
InParanoid:Q7Z333 OMA:RLINHFE OrthoDB:EOG4XWFWX PhylomeDB:Q7Z333
ChiTaRS:SETX GenomeRNAi:23064 NextBio:44145 ArrayExpress:Q7Z333
Bgee:Q7Z333 Genevestigator:Q7Z333 GermOnline:ENSG00000107290
PANTHER:PTHR10887:SF15 Uniprot:Q7Z333
Length = 2677
Score = 155 (59.6 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 59/198 (29%), Positives = 95/198 (47%)
Query: 245 KTVSMLLDFCFTKASLIFCTASSS--YKLHRVAMEQ--LKF--LVIDEAAQLKEVESAIP 298
KT S+++ ++ +I CT S+S L Q + F +++DEA Q E+E+ P
Sbjct: 2139 KTQSIII----LESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTP 2194
Query: 299 LKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERLSNLGQ--AKH---------L 347
L + IL+GD QLP V S + E +S+ R L + +H
Sbjct: 2195 L-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCRLLEENVEHNMISRLPILQ 2253
Query: 348 LSIQYRMHPSISSFPNSYFYDNKIFDSPNVKEKNYEKRFLPGRMYGPYSFINVLDGREES 407
L++QYRMHP I FP++Y Y+ + + + + P + PY +V DG E
Sbjct: 2254 LTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAIRCSSDW-P---FQPYLVFDVGDGSERR 2309
Query: 408 IAHSYRNMVEVFVVMKIL 425
SY N+ E+ +VM+I+
Sbjct: 2310 DNDSYINVQEIKLVMEII 2327
Score = 76 (31.8 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 210 NDSQAQAVLSCLRRT-HCDHKATVELIWGPPGTGKTKTVSMLL 251
N+ Q +A+ + H A + LI GPPGTGK+KT+ LL
Sbjct: 1935 NEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLL 1977
Score = 57 (25.1 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 21/66 (31%), Positives = 30/66 (45%)
Query: 456 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNAEDEEDLGKA--ILGVKKELDEFDDL 513
+ L+ILG+ RTL + W L+ DA R D+ A IL +K L L
Sbjct: 2417 YSLFILGHLRTLMENQH-WNQLIQDAQKRGAIIKTCDKNYRHDAVKILKLKPVLQR--SL 2473
Query: 514 LNPGSI 519
+P +I
Sbjct: 2474 THPPTI 2479
Score = 44 (20.5 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 19/121 (15%), Positives = 45/121 (37%)
Query: 26 TRAQLSSSMEKISEAPFAQVVDLEDSKPYGAMLSDVKVDYWRNRFSNYSKESYKVLPGDI 85
T +Q+ + K+S A V+ P + KV + F+ G +
Sbjct: 954 TDSQIDRDLHKLSLLAQASVITFPSDSPQNSSQLQRKVKEDKRCFTANQNNVGDTSRGQV 1013
Query: 86 LVLADAKPETASDLRRVGRMWTFVSVTKVTEDKNESDTTSTSFKVKASKENQIDGANKSL 145
++++D+ + D R+ + K+ ++ + ++ K K + ++L
Sbjct: 1014 IIISDSDDD---DDERILSLEKLTKQDKICLEREHPEQHVSTVNSKEEKNPVKEEKTETL 1070
Query: 146 F 146
F
Sbjct: 1071 F 1071
Score = 44 (20.5 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 184 EDCELCP-VQSDG--IWNDIFGPSLSSTLNDSQAQAVLSCLRRTHCDHKATVE 233
ED +LC +++D + I G DS ++ L L T C +K +E
Sbjct: 1504 EDMDLCSQMENDNYKLIELIHGKDTVEVEEDSVSRPQLESLSGTKCKYKDCLE 1556
Score = 37 (18.1 bits), Expect = 6.3e-07, Sum P(4) = 6.3e-07
Identities = 13/52 (25%), Positives = 23/52 (44%)
Query: 50 DSKPYGAMLSDVKVDYWRNRFSNYSKESYKVLPGDILVLADAKPETASDLRR 101
D P L+D ++D ++ S ++ S P D P+ +S L+R
Sbjct: 945 DISPKSDTLTDSQIDRDLHKLSLLAQASVITFPSD-------SPQNSSQLQR 989
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 1007 SELKQLYVAITRTRQRLWIWENMEEFSKPMFDYWKKKSLVQVRQ 1050
+ L++L V ITR + L+I ++ + +W + L+Q Q
Sbjct: 2403 ASLQRLNVTITRAKYSLFILGHLRTLMENQ--HWNQ--LIQDAQ 2442
>UNIPROTKB|F1PCI1 [details] [associations]
symbol:C4orf21 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AAEX03016829
Ensembl:ENSCAFT00000018553 Uniprot:F1PCI1
Length = 1024
Score = 182 (69.1 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 49/156 (31%), Positives = 78/156 (50%)
Query: 276 MEQLKF--LVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQL-PAMVESSVSGEACLGR 332
M LKF +V+DE +Q+ E S +P+ + IL+GD QL P + S + E L +
Sbjct: 719 MNDLKFPVVVLDECSQITEPASLLPIARFECEKLILVGDPKQLSPTIQGSDAAHENGLEQ 778
Query: 333 SLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNVKEKNYEKRFLPGRMY 392
+LF+RL +G LL QYR HP+IS N FY+ + D + E+ +LP
Sbjct: 779 TLFDRLCLMGHKPVLLRTQYRCHPAISDISNDLFYEGNLVDGISETERGPLLEWLP---- 834
Query: 393 GPYSFINVLDGREESIAHSYRNMVEVFVVMKILLNL 428
F N+ + +S+ N+ E +K++ +L
Sbjct: 835 -TLCFYNIKGPEQIERDNSFHNVAEAAFTLKLIQSL 869
Score = 46 (21.3 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 8/18 (44%), Positives = 15/18 (83%)
Query: 71 SNYSKESYKVLPGDILVL 88
+++ KES +V+P D+L+L
Sbjct: 39 TSFCKESREVIPQDVLLL 56
Score = 40 (19.1 bits), Expect = 5.6e-07, Sum P(3) = 5.6e-07
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 4 IPLSFQSVNRYFESFVFPLLEETRAQLSSSMEKISEA 40
IP FQS Y + F L+E L +++ +A
Sbjct: 207 IPAVFQSPAHYKQIFTSCLIEHLNILLFGLAQRLHKA 243
Score = 39 (18.8 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 1010 KQLYVAITRTRQRLWIWENM 1029
K++ VA+TR R+ L I N+
Sbjct: 942 KRMNVALTRGRRHLLIVGNL 961
>UNIPROTKB|D4AEB3 [details] [associations]
symbol:Setx "Protein Setx" species:10116 "Rattus
norvegicus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 RGD:1565575 GO:GO:0005737
GO:GO:0005654 GO:GO:0006302 KO:K10706 GeneTree:ENSGT00580000081652
CTD:23064 OMA:RLINHFE OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15
IPI:IPI00476851 RefSeq:XP_342401.3 ProteinModelPortal:D4AEB3
PRIDE:D4AEB3 Ensembl:ENSRNOT00000017984 GeneID:362096
KEGG:rno:362096 NextBio:678646 ArrayExpress:D4AEB3 Uniprot:D4AEB3
Length = 2647
Score = 160 (61.4 bits), Expect = 1.9e-07, Sum P(4) = 1.9e-07
Identities = 53/155 (34%), Positives = 77/155 (49%)
Query: 282 LVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERLSNL 341
+++DEA Q EVE+ PL + +L+GD QLP V S + E +S+ R L
Sbjct: 2155 VIVDEAGQSCEVETLSPL-IHRCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMARFCKL 2213
Query: 342 ----------GQAKHL-LSIQYRMHPSISSFPNSYFYDNKIFDSPNVKEKNYEKRFLPGR 390
G+ L L+IQYRMHP I FP++Y Y NK + + E P
Sbjct: 2214 LEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVY-NKNLKTNRLTETIRCSSEWP-- 2270
Query: 391 MYGPYSFINVLDGREESIAHSYRNMVEVFVVMKIL 425
+ PY +V DG E+ SY N+ E+ +VM+I+
Sbjct: 2271 -FQPYLVFDVGDGSEQRDNDSYINVQEIKLVMEII 2304
Score = 76 (31.8 bits), Expect = 1.9e-07, Sum P(4) = 1.9e-07
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 210 NDSQAQAVLSCLRRT-HCDHKATVELIWGPPGTGKTKTVSMLL 251
N+ Q +A+ + H A + LI GPPGTGK+KT+ LL
Sbjct: 1912 NEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLL 1954
Score = 54 (24.1 bits), Expect = 1.9e-07, Sum P(4) = 1.9e-07
Identities = 27/91 (29%), Positives = 37/91 (40%)
Query: 456 HCLWILGNARTLTRKKSVWEALVHDANARQCFFNAED---EEDLGKAILGVKKELDEFDD 512
+ L+ILG+ RTL + W L+ DA R D D K IL +K L
Sbjct: 2394 YSLFILGHLRTLMENQH-WYELIQDAQKRGAIIKTCDPNYRHDAMK-ILKLKPVLQR--S 2449
Query: 513 LLNPGSILFRSQRWKVNFSENFLKSFRKLTS 543
L +P + + R + N L S TS
Sbjct: 2450 LTHPPATAPEAPRPQGGLPSNRLDSGLATTS 2480
Score = 40 (19.1 bits), Expect = 1.9e-07, Sum P(4) = 1.9e-07
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 4 IPLSFQSVNRYFESFVFPLL 23
+P+ FQ YF F+ PL+
Sbjct: 1715 VPVRFQDCAEYFNVFL-PLI 1733
Score = 37 (18.1 bits), Expect = 3.8e-07, Sum P(4) = 3.8e-07
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 83 GDILVLADAKPETASD 98
G++ + A+PE++SD
Sbjct: 1460 GEVAAVRAAEPESSSD 1475
>UNIPROTKB|E1BG37 [details] [associations]
symbol:E1BG37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 EMBL:DAAA02016483 IPI:IPI00912094
Ensembl:ENSBTAT00000017567 OMA:HKLGTNK Uniprot:E1BG37
Length = 933
Score = 187 (70.9 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 49/156 (31%), Positives = 81/156 (51%)
Query: 276 MEQLKF--LVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVESS-VSGEACLGR 332
M LKF +V+DE +Q+ E S +P+ + IL+GD QLP ++ S + E L +
Sbjct: 621 MNDLKFPVVVLDECSQMTEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQ 680
Query: 333 SLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNVKEKNYEKRFLPGRMY 392
+LF+RL +G LL QYR HP+IS+ N FY+ + + + E++ +LP
Sbjct: 681 TLFDRLCLMGHKPILLRTQYRCHPTISAIANDLFYEGNLMNGISETERSPLLEWLP---- 736
Query: 393 GPYSFINVLDGREESIAHSYRNMVEVFVVMKILLNL 428
F NV + +S+ N+ E +K++ +L
Sbjct: 737 -TLCFYNVKGLEQIERGNSFHNVAEAAFTLKLIQSL 771
Score = 39 (18.8 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 1010 KQLYVAITRTRQRLWIWENM 1029
K++ VA+TR R+ L I N+
Sbjct: 844 KRMNVALTRGRRHLLIVGNL 863
Score = 37 (18.1 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 4 IPLSFQSVNRYFESFVFPLLEETRAQLSSSMEKISEA 40
IP FQS Y + F L E L +++ +A
Sbjct: 109 IPAVFQSPAHYKQVFTSCLTEHLNILLFGLAQRLHKA 145
>RGD|2322000 [details] [associations]
symbol:LOC100363957 "hypothetical protein LOC100363957"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 RGD:2322000
GO:GO:0008270 GeneTree:ENSGT00550000074391 IPI:IPI00777941
Ensembl:ENSRNOT00000014695 Uniprot:F1M404
Length = 919
Score = 177 (67.4 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 47/156 (30%), Positives = 79/156 (50%)
Query: 276 MEQLKF--LVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVESSVSGEAC-LGR 332
M LKF +V+DE +Q+ E S +P+ + IL+GD QLP ++ S + L +
Sbjct: 615 MNDLKFPVVVLDECSQMTEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHGNGLEQ 674
Query: 333 SLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNVKEKNYEKRFLPGRMY 392
+LF+RL +G L QYR HP IS+ N FY+ + + + +E++ +LP
Sbjct: 675 TLFDRLCLMGHKPIQLRTQYRCHPVISAIANDLFYEGNLVNGISERERSPVLEWLP---- 730
Query: 393 GPYSFINVLDGREESIAHSYRNMVEVFVVMKILLNL 428
F NV + +S+ N+ E +K++ +L
Sbjct: 731 -TLCFYNVTGTEQVERENSFVNVAEAAFTLKLIRSL 765
Score = 37 (18.1 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 1010 KQLYVAITRTRQRLWIWENMEEFSKPMFDYWKKKSLVQVRQLDDSLAQAMQ 1060
K++ VA+TR R+ L I ++ K W + + + +D L A Q
Sbjct: 838 KRMNVALTRGRRHLLIIGSLSCLRKNQL--WGRV-IQHCKGREDGLQHASQ 885
>UNIPROTKB|G5EA02 [details] [associations]
symbol:C4orf21 "Uncharacterized protein C4orf21"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
EMBL:CH471057 InterPro:IPR018838 Pfam:PF10382 UniGene:Hs.713663
RefSeq:NP_060862.3 UniGene:Hs.380346 GeneID:55345 KEGG:hsa:55345
CTD:55345 GenomeRNAi:55345 NextBio:59679 EMBL:AC106864
EMBL:AC023886 PRIDE:G5EA02 Ensembl:ENST00000505019 HGNC:HGNC:25654
OMA:NTYESSG ArrayExpress:G5EA02 Bgee:G5EA02 Uniprot:G5EA02
Length = 2104
Score = 179 (68.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 49/156 (31%), Positives = 79/156 (50%)
Query: 276 MEQLKF--LVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVESS-VSGEACLGR 332
M LKF +V+DE +Q+ E S +P+ + IL+GD QLP ++ S + E L +
Sbjct: 1798 MNDLKFPVVVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQ 1857
Query: 333 SLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNVKEKNYEKRFLPGRMY 392
+LF+RL +G LL QYR HP+IS+ N FY + + E++ +LP
Sbjct: 1858 TLFDRLCLMGHKPILLRTQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLEWLP---- 1913
Query: 393 GPYSFINVLDGREESIAHSYRNMVEVFVVMKILLNL 428
F NV + +S+ N+ E +K++ +L
Sbjct: 1914 -TLCFYNVKGLEQIERDNSFHNVAEATFTLKLIQSL 1948
Score = 42 (19.8 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 4 IPLSFQSVNRYFESFVFPLLEETRAQLSSSMEKISEA 40
IP FQS Y ++F L+E L + + +A
Sbjct: 1286 IPAVFQSPAHYKQTFTSCLIEHLNILLFGLAQNLQKA 1322
Score = 39 (18.8 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 73 YSKESYKVLPGDI 85
+S+ES +V PGD+
Sbjct: 1123 FSEESREVNPGDV 1135
Score = 38 (18.4 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 134 KENQIDGANKSLFAIFLTNVTSNTRI----WNSLHMS 166
K QI+ +N S + +T++ S +++ NS+H S
Sbjct: 483 KHLQIESSNNSRISDDITDMISESKMDNESLNSIHES 519
>UNIPROTKB|E2RBM4 [details] [associations]
symbol:PRIC285 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AAEX03014158 Ensembl:ENSCAFT00000020582 OMA:RCQYAHS
Uniprot:E2RBM4
Length = 2919
Score = 155 (59.6 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 40/113 (35%), Positives = 60/113 (53%)
Query: 260 LIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPL-KLPGIQHAILIGDECQLPA 318
L C+ ++S L ++ + Q+ +IDEA E E+ IPL + +L+GD QL
Sbjct: 2608 LCTCSCAASASLRKLDVRQI---LIDEAGMATEPETLIPLVAFSKAEKVVLLGDHKQLRP 2664
Query: 319 MVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKI 371
+V++ L RSLFER H+L QYRMH I +FP+ FY+ K+
Sbjct: 2665 VVKNEQLQNLGLDRSLFERYH---VDAHMLDTQYRMHEGICAFPSMEFYEKKL 2714
Score = 73 (30.8 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 203 PSLSSTLNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLLDFCFTKAS 259
P TLN SQ +AV + L++ + TV I GPPGTGKT V+ + F F K++
Sbjct: 2417 PGGPHTLNRSQNRAVRAALKK-----QFTV--IQGPPGTGKT-VVAFHIVFWFHKSN 2465
Score = 57 (25.1 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 234 LIWGPPGTGKTKTVSML-LDFCFTK-ASLIFCTASSS 268
LI+GP GTGKT T++M L+ ++ CT ++S
Sbjct: 788 LIYGPFGTGKTYTLAMASLEVIRQPHTKVLICTHTNS 824
Score = 40 (19.1 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 54 YGAMLSDVKVDYWRNRFSNYSKESYKVLPG 83
+GA ++ ++ + + S S+++LPG
Sbjct: 1082 HGAQVTALRQELRKRNLGQVSVGSFEILPG 1111
>UNIPROTKB|E1C0Z0 [details] [associations]
symbol:HELZ2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 SMART:SM00355
SMART:SM00955 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
GO:GO:0004386 GO:GO:0004540 OMA:FRAAHIM PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 EMBL:AADN02019144 IPI:IPI00594758
Ensembl:ENSGALT00000009906 Uniprot:E1C0Z0
Length = 2565
Score = 147 (56.8 bits), Expect = 4.1e-06, Sum P(4) = 4.1e-06
Identities = 49/156 (31%), Positives = 79/156 (50%)
Query: 260 LIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPL-KLPGIQHAILIGDECQLPA 318
L C+++S+ L ++ ++Q+ +IDE A E E+ IPL + +L+GD QL
Sbjct: 2254 LCTCSSASAGSLEKLNVKQI---LIDECAMSTEPETLIPLVSHKHAEKVVLLGDHKQLKP 2310
Query: 319 MVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPN-- 376
+V + + SLFER QA +L QYRMH +I FP+ FY++++ P
Sbjct: 2311 VVNNDFCKSLGMETSLFERYQK--QA-WMLDTQYRMHKNICEFPSQEFYEHRLKTCPQLL 2367
Query: 377 -VKEKNYEKRFLPGRMYGPYSFINVLDGREESIAHS 411
+ Y K R P F +V +G+E+S+ S
Sbjct: 2368 RIPSVLYHKN---NRCC-PIIFGHV-EGKEQSLVIS 2398
Score = 67 (28.6 bits), Expect = 4.1e-06, Sum P(4) = 4.1e-06
Identities = 19/42 (45%), Positives = 22/42 (52%)
Query: 203 PSLSSTLNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKT 244
P LN SQ +AVL+ L + LI GPPGTGKT
Sbjct: 2062 PGSQRKLNPSQNKAVLNALTKPFT-------LIQGPPGTGKT 2096
Score = 58 (25.5 bits), Expect = 4.1e-06, Sum P(4) = 4.1e-06
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 956 VLTIVESKGLEFQ-VIHYTSQCCNSPFKHALFDSTSPGSFPSFNEAKHNVLCSELKQLYV 1014
V TI++S+G E++ VI T + C+ +H + D S+ + KH ++ Q+ V
Sbjct: 2461 VCTIMKSQGSEWRYVILSTVRSCS---RHEI-DKKPTKSW----QKKHLGFVTDPNQVNV 2512
Query: 1015 AITRTRQRLWIWEN 1028
AITR ++ L I N
Sbjct: 2513 AITRAQEGLCIIGN 2526
Score = 56 (24.8 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 234 LIWGPPGTGKTKTVSML-LDFCFT-KASLIFCTASSS 268
LI+GP GTGKT T++M L+ ++ CT ++S
Sbjct: 538 LIYGPFGTGKTFTLAMATLEVIRQPNTRVLICTHTNS 574
Score = 44 (20.5 bits), Expect = 4.1e-06, Sum P(4) = 4.1e-06
Identities = 22/107 (20%), Positives = 45/107 (42%)
Query: 2 EQIPLSFQSVNRYFESFVFPLLEETRAQLSSSMEKISEA--PFAQVVDLEDSK-----PY 54
E PL F V E + + ++++ +EK+ E + +D K +
Sbjct: 773 EIYPLMFCHVPGVAERDMSMISWHNASEITQVVEKVEEIYQRWPHEWGAQDQKRICVVSH 832
Query: 55 GAMLSDVKVDYWRNRFSNYSKESYKVLPG-DILVLADAKPETASDLR 100
G +S ++ + + + E+Y+ LPG + V+ + T+ LR
Sbjct: 833 GVQVSAIRQELRKKQLPEVVVENYENLPGREFRVIIISTVHTSESLR 879
>TAIR|locus:2064158 [details] [associations]
symbol:EMB2765 "EMBRYO DEFECTIVE 2765" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0005886 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112 HOGENOM:HOG000170551
KO:K12874 OMA:RTKAVGH GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:AY099864 IPI:IPI00544394 RefSeq:NP_850297.1 UniGene:At.23967
ProteinModelPortal:Q8L5Y4 SMR:Q8L5Y4 STRING:Q8L5Y4 PaxDb:Q8L5Y4
PRIDE:Q8L5Y4 EnsemblPlants:AT2G38770.1 GeneID:818459
KEGG:ath:AT2G38770 TAIR:At2g38770 InParanoid:Q8L5Y4
PhylomeDB:Q8L5Y4 ProtClustDB:CLSN2680117 Genevestigator:Q8L5Y4
Uniprot:Q8L5Y4
Length = 1509
Score = 142 (55.0 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 63/203 (31%), Positives = 98/203 (48%)
Query: 245 KTVSMLLDFCFTKASLIFCTASSSYKLHRVAMEQLKF----LVIDEAAQLKEVESAIPLK 300
K+ + ++ TK + I + L R QL F L+++E+AQ+ E+E+ IP+
Sbjct: 1079 KSTADRANYLMTKQAKIVAMTCTHAALKRRDFLQLGFKYDNLLMEESAQILEIETFIPML 1138
Query: 301 LPGIQ--HA-----ILIGDECQLPAMVESSVSGE-ACLGRSLFERLSNLGQAKHLLSIQY 352
L + HA ILIGD QLP +V++ + + + +SLF R LG L+ Q
Sbjct: 1139 LQRQEDGHARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIPYIELNAQG 1198
Query: 353 RMHPSISSFPNSYFYDNKIFDSPNVKEKNYEKRFLPGRMYGPYSFINVLD--GREESIAH 410
R PS++ N + D + D VKE +R G Y Y +NV D GR ES
Sbjct: 1199 RARPSLAKLYNWRYRD--LGDLSIVKEAPIFQRANAGFSY-EYQLVNVPDYEGRGESTPS 1255
Query: 411 S--YRN------MVEVFVVMKIL 425
Y+N +V V++ M++L
Sbjct: 1256 PWFYQNQGEAEYIVSVYIYMRLL 1278
Score = 59 (25.8 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 234 LIWGPPGTGKTKTVSMLLDFCF 255
++ GPPGTGKT T +L+ +
Sbjct: 884 MVVGPPGTGKTDTAVQILNVLY 905
Score = 53 (23.7 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 13 RYFESFVFPLLEETRAQLSSSMEKISEAPFAQVVDL----E--DSKPY-GAMLSDVK-VD 64
RY V + + +LS+ + FAQ+VDL E + K + G L+D + +
Sbjct: 316 RYLRPLVADIAVVAKCRLSALYKHEKGKLFAQLVDLLQFYEKFEIKDHDGTQLTDDEALQ 375
Query: 65 YWRNRFSNYSKESYKVLPG-DILVLAD-AKPETASDLRR 101
+ +RF + ++K +P L LA+ +SDLRR
Sbjct: 376 FHYDRFMAFQLLAFKKIPKLQDLSLANIGSIHKSSDLRR 414
>UNIPROTKB|Q9BYK8 [details] [associations]
symbol:HELZ2 "Helicase with zinc finger domain 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 PROSITE:PS50157
SMART:SM00355 SMART:SM00382 SMART:SM00955 GO:GO:0005524
Reactome:REACT_111045 GO:GO:0005654 GO:GO:0044281 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0044255
GO:GO:0006351 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
GO:GO:0030374 eggNOG:COG0557 InterPro:IPR022966 EMBL:AL121829
EMBL:AF517673 EMBL:AB201715 EMBL:AB051556 EMBL:AK074171
EMBL:AK055611 IPI:IPI00249304 IPI:IPI00249305 IPI:IPI00736631
RefSeq:NP_001032412.2 RefSeq:NP_208384.3 UniGene:Hs.517180
ProteinModelPortal:Q9BYK8 IntAct:Q9BYK8 STRING:Q9BYK8
PhosphoSite:Q9BYK8 DMDM:209572784 PaxDb:Q9BYK8 PRIDE:Q9BYK8
GeneID:85441 KEGG:hsa:85441 UCSC:uc002yfl.1 UCSC:uc002yfm.2
CTD:85441 GeneCards:GC20M062189 HGNC:HGNC:30021 HPA:HPA051267
MIM:611265 neXtProt:NX_Q9BYK8 HOGENOM:HOG000231856
HOVERGEN:HBG080465 InParanoid:Q9BYK8 OMA:FRAAHIM PhylomeDB:Q9BYK8
GenomeRNAi:85441 NextBio:76020 ArrayExpress:Q9BYK8 Bgee:Q9BYK8
Genevestigator:Q9BYK8 GermOnline:ENSG00000130589
PANTHER:PTHR10887:SF16 Uniprot:Q9BYK8
Length = 2649
Score = 161 (61.7 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 40/120 (33%), Positives = 64/120 (53%)
Query: 253 FCFTKASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPL-KLPGIQHAILIG 311
F + +I CT S + ++ ++ +++DEA E E+ IPL + P + +L+G
Sbjct: 2329 FELDRHEVILCTCSCAASASLKILD-VRQILVDEAGMATEPETLIPLVQFPQAEKVVLLG 2387
Query: 312 DECQLPAMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKI 371
D QL +V++ L RSLFER + H+L QYRMH I +FP+ FY +K+
Sbjct: 2388 DHKQLRPVVKNERLQNLGLDRSLFERYH---EDAHMLDTQYRMHEGICAFPSVAFYKSKL 2444
Score = 61 (26.5 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 22/51 (43%), Positives = 27/51 (52%)
Query: 209 LNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLLDFCFTKAS 259
LN SQ AV L + TV I GPPGTGKT V + + F F K++
Sbjct: 2153 LNPSQNVAVREALEKPF-----TV--IQGPPGTGKT-IVGLHIVFWFHKSN 2195
Score = 44 (20.5 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 54 YGAMLSDVKVDYWRNRFSNYSKESYKVLPG 83
+GA +S ++ + R S S+++LPG
Sbjct: 835 HGAQVSALRQELRRRDLGQVSVGSFEILPG 864
Score = 43 (20.2 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 1782 TKSSFVDWFIYQEGSTNPTCSSST-DVKQSFGGVLEFIGTVV 1822
TKS +W Y ST TC+ S D + + + +F+G VV
Sbjct: 2549 TKSQGSEWR-YVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVV 2589
>RGD|1306056 [details] [associations]
symbol:Pric285 "peroxisomal proliferator-activated receptor A
interacting complex 285" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0004540 "ribonuclease activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 RGD:1306056 GO:GO:0005524
GO:GO:0003723 GO:GO:0004386 GO:GO:0004540 PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 IPI:IPI00567928 RefSeq:XP_001057758.2
RefSeq:XP_230961.5 UniGene:Rn.47450 ProteinModelPortal:D4ADC2
Ensembl:ENSRNOT00000017787 GeneID:296474 KEGG:rno:296474
UCSC:RGD:1306056 CTD:296474 OrthoDB:EOG4Q84WM NextBio:641262
ArrayExpress:D4ADC2 Uniprot:D4ADC2
Length = 2944
Score = 148 (57.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 56/179 (31%), Positives = 85/179 (47%)
Query: 259 SLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLK-LPGIQHAILIGDECQLP 317
S+I CT S + A+ ++ ++IDEA E E+ IPL + +L+GD QL
Sbjct: 2630 SVILCTCSCAASGSLKALN-VRQILIDEAGMATEPETLIPLVCFSKTEKVVLLGDHKQLR 2688
Query: 318 AMVESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKIFDSPNV 377
+V++ + RSLFER + +L QYRMH I SFP+ FY K+ ++
Sbjct: 2689 PVVKNEQLRNLGMDRSLFERYH---RDAIMLDTQYRMHKDICSFPSMEFYGGKLKTWSDL 2745
Query: 378 KEK-----NYEKRFLP---GRMYGPYSFINVLDGREESIAHSYRNMVEVFVVMKILLNL 428
K + K+ P G + G Y +L EE +S N EV V++I+ L
Sbjct: 2746 KRPPSLLGHVGKQSCPVIFGSVQG-YEQ-KLLVSTEEGNENSRANPEEVTEVVRIIKQL 2802
Score = 58 (25.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 22/62 (35%), Positives = 30/62 (48%)
Query: 210 NDSQAQAV-LSCLRRTHCDHKATVELIWGPPGTGKTKTVSML-LDFCFTK-ASLIFCTAS 266
N Q AV L RR LI+GP GTGKT T++M L+ ++ CT +
Sbjct: 761 NHKQKLAVGLIAGRRPEGSKHIPPLLIYGPFGTGKTYTLAMAALEVVQQPHTKVLICTHT 820
Query: 267 SS 268
+S
Sbjct: 821 NS 822
Score = 46 (21.3 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 54 YGAMLSDVKVDYWRNRFSNYSKESYKVLPG 83
+GA +S ++ + R S S+++LPG
Sbjct: 1080 HGAQVSALRQELRRRNLGEVSVGSFEILPG 1109
>POMBASE|SPBC16D10.04c [details] [associations]
symbol:dna2 "DNA replication endonuclease-helicase
Dna2" species:4896 "Schizosaccharomyces pombe" [GO:0000084 "S phase
of mitotic cell cycle" evidence=IC] [GO:0000723 "telomere
maintenance" evidence=IGI] [GO:0000784 "nuclear chromosome,
telomeric region" evidence=ISO] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISO] [GO:0004518 "nuclease activity"
evidence=IMP] [GO:0004527 "exonuclease activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=IMP] [GO:0031860 "telomeric 3' overhang
formation" evidence=IMP] [GO:0042162 "telomeric DNA binding"
evidence=IDA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IMP] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IC] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0071932 "replication fork reversal" evidence=IMP]
InterPro:IPR026851 PomBase:SPBC16D10.04c InterPro:IPR014808
Pfam:PF08696 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0051539
GO:GO:0043596 GO:GO:0004003 GO:GO:0004527 GO:GO:0000084
eggNOG:COG1112 GO:GO:0000784 GO:GO:0042162 GO:GO:0031573
GO:GO:0017108 GO:GO:0043137 GO:GO:0031860 GO:GO:0043142
PANTHER:PTHR10887:SF14 EMBL:AF144384 EMBL:AB028014 EMBL:AF075169
PIR:T39568 PIR:T47242 PIR:T51292 RefSeq:NP_596499.2 STRING:Q9URU2
GeneID:2540148 OrthoDB:EOG47H8Z4 NextBio:20801284 GO:GO:0071932
InterPro:IPR022765 Pfam:PF01930 Uniprot:Q9URU2
Length = 1397
Score = 126 (49.4 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 42/128 (32%), Positives = 66/128 (51%)
Query: 265 ASSSYKLHRVAMEQLKF--LVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVES 322
A SS ++ + KF +IDEA+Q+ PL+L + +L+GD QLP +V++
Sbjct: 1043 ACSSLGVYHSIFNKRKFDYCIIDEASQIPLPICLGPLQLA--EKFVLVGDHYQLPPLVKN 1100
Query: 323 SVSGEACLGRSLFERLSNLG-QAKHLLSIQYRMHPSISSFPNSYFYD-NKIFDSPNVKEK 380
S + + L SLF+ LS +A L +QYRM+ I+S + Y N + S + +K
Sbjct: 1101 SRTSKDGLSLSLFKLLSEKHPEAVTTLRLQYRMNEDINSLSSELIYGGNLVCGSKTISQK 1160
Query: 381 NYEKRFLP 388
K LP
Sbjct: 1161 ---KLILP 1165
Score = 80 (33.2 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 22/66 (33%), Positives = 28/66 (42%)
Query: 200 IFGPSLSSTLNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLLDFCFTKAS 259
+ P LN+ Q A+ C H LI G PGTGKT T+S L+ K
Sbjct: 923 LIDPEFLKCLNEDQITALKKCHAAEH------YSLILGMPGTGKTTTISSLIRSLLAKKK 976
Query: 260 LIFCTA 265
I T+
Sbjct: 977 KILLTS 982
Score = 43 (20.2 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 30/151 (19%), Positives = 68/151 (45%)
Query: 606 EDVPKLVARLDNILAKYTDEFINHCKEKCIEGNLEVPKTWAATSKVVRFKNLADIDSDSE 665
+D+ + ++ +NIL +T+ F+ E+ + LE ++ + +K+ ++ S +
Sbjct: 1199 DDILGVESKTNNILENHTEAFLI---EQAVSSFLERGVKQSSIGIISIYKSQVELLSKNL 1255
Query: 666 SDLGGAASDSTSYVENSNVSDSLLLMKFYSLSSGAVSHLLSDRDGGELDLPFEVTDEQLE 725
++ + + D +L+ S S V LL RD L++ ++ +++
Sbjct: 1256 KSFTEIEINTVDRYQGRD-KDIILISFVRSNSKNLVGELL--RDWHRLNVA--LSRAKVK 1310
Query: 726 MILFPKSSFILGRSGTGKTTILTMKLFQKEK 756
I+F S + S + + L +KL +K K
Sbjct: 1311 CIMFGSLSTL---SSSNIVSHL-LKLLEKNK 1337
>UNIPROTKB|J9NRI6 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014001 PROSITE:PS51192 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Ensembl:ENSCAFT00000046272 Uniprot:J9NRI6
Length = 640
Score = 130 (50.8 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 32/91 (35%), Positives = 48/91 (52%)
Query: 281 FLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERLSN 340
F ++DEA+Q+ + PL Q +L+GD QLP +V + + + SLF+RL
Sbjct: 337 FCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQ 394
Query: 341 LGQAKHLLSIQYRMHPSISSFPNSYFYDNKI 371
A L++QYRM+ I S N YD K+
Sbjct: 395 NKNAVVQLTVQYRMNSKIMSLSNKLTYDGKL 425
Score = 68 (29.0 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 234 LIWGPPGTGKTKTVSMLLDFCFTKASLIFCTASSSYKLHRVAMEQLKFLV 283
LI G PGTGKT T+ L+ +T + T+ + + + ++ KF +
Sbjct: 224 LIVGMPGTGKTTTICTLVRILYTCGFSVLLTSYTHSAVDNILLKLAKFKI 273
Score = 38 (18.4 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 1005 LCSELKQLYVAITRTRQRL 1023
L + ++L VAITR + +L
Sbjct: 573 LLKDWRRLNVAITRAKHKL 591
>DICTYBASE|DDB_G0274797 [details] [associations]
symbol:aqr "intron-binding protein aquarius homolog"
species:44689 "Dictyostelium discoideum" [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR024860 dictyBase:DDB_G0274797
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000012
GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 RefSeq:XP_643918.1 ProteinModelPortal:Q555Z2
PRIDE:Q555Z2 EnsemblProtists:DDB0233439 GeneID:8619345
KEGG:ddi:DDB_G0274797 InParanoid:Q555Z2 ProtClustDB:CLSZ2431000
Uniprot:Q555Z2
Length = 1487
Score = 121 (47.7 bits), Expect = 4.5e-05, Sum P(4) = 4.5e-05
Identities = 46/128 (35%), Positives = 66/128 (51%)
Query: 303 GIQHAILIGDECQLPAMVES-SVSGEACLGRSLFERLSNLGQAKHL-LSIQYRMHPSISS 360
G++ ILIGD QLP +V++ S++ + +SLF RL L + H+ L Q R PSIS
Sbjct: 1194 GLKRVILIGDHNQLPPIVQNQSLAKYSHFDQSLFTRLIRL-EIPHITLDRQGRSRPSISE 1252
Query: 361 FPNSYFYDNKIFDSPNVKEKNYEKRFLPGRMYGPYSFINVLD------GREESIAHSYRN 414
S+ Y + D P VKE+ K PG Y Y INV + G E + Y+N
Sbjct: 1253 L-FSWKYKG-LQDLPLVKEQLQFKLANPGLAYD-YQLINVDESDGYGVGESEPTPYFYQN 1309
Query: 415 MVEV-FVV 421
+ E ++V
Sbjct: 1310 LGEAEYIV 1317
Score = 61 (26.5 bits), Expect = 4.5e-05, Sum P(4) = 4.5e-05
Identities = 16/48 (33%), Positives = 30/48 (62%)
Query: 256 TKASLIFCTASSSYKLHRVAMEQLKF--LVIDEAAQLKEVESAIPLKL 301
+K + CT ++ K + + KF L+++E+AQ+ ++ES IPL+L
Sbjct: 1118 SKIVAMTCT-HAALKRNELLRLGFKFDNLLMEESAQISDIESFIPLQL 1164
Score = 60 (26.2 bits), Expect = 4.5e-05, Sum P(4) = 4.5e-05
Identities = 24/109 (22%), Positives = 49/109 (44%)
Query: 68 NRFSNYSKESYKVLPGDILVLADAKPETASDLRRVGRMWT--FVSVT-KVTEDKNESDTT 124
N SN + E + + ++ D T +L + +++ + +T K+ E++ ++
Sbjct: 759 NNNSNNNNEGEEKKENEFILFND----TFLNLNHINKVYNDKTIEITDKLKEEQENNNNN 814
Query: 125 STSFKVKASKENQIDGANKSLFAIFLTNVTSNTRIWNSLHMSGNLKIIK 173
+ +FK+K + EN N L + N +N N + NL+ IK
Sbjct: 815 NNNFKIKFNNEN-----NSILVDTYNNNNDNNNNNNNIIIKKENLEEIK 858
Score = 54 (24.1 bits), Expect = 4.5e-05, Sum P(4) = 4.5e-05
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 213 QAQAVLSCLRRTHCDHKATVELIWGPPGTGKT 244
Q +A+ S ++R + + LI GPPGTGKT
Sbjct: 868 QIEAISSGMKRDN------LTLIVGPPGTGKT 893
>DICTYBASE|DDB_G0271732 [details] [associations]
symbol:DDB_G0271732 "AN1-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0032508 "DNA duplex unwinding"
evidence=ISS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51061
SMART:SM00382 dictyBase:DDB_G0271732 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 EMBL:AAFI02000006 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
OMA:HARQRIS RefSeq:XP_645520.1 ProteinModelPortal:Q75JA0
PRIDE:Q75JA0 EnsemblProtists:DDB0232283 GeneID:8618149
KEGG:ddi:DDB_G0271732 InParanoid:Q75JA0 ProtClustDB:CLSZ2846906
Uniprot:Q75JA0
Length = 1024
Score = 134 (52.2 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 38/130 (29%), Positives = 65/130 (50%)
Query: 250 LLDFCFTKASLIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAIL 309
L+ +++I T + + ++ ++VIDE AQ E IP++ G +L
Sbjct: 389 LIQQVINDSNVILSTNTGASDSSLKGIDNFDWVVIDECAQALEASCWIPIQ-KG-NKLLL 446
Query: 310 IGDECQLPAMVESSVSGEACLGRSLFERL-SNLG-QAKHLLSIQYRMHPSISSFPNSYFY 367
GD QLP + S + + L +LFER+ G Q LL++QYRM+ I + + FY
Sbjct: 447 AGDHQQLPPTIHSMEAAKMGLSITLFERIIKQYGDQVSRLLNVQYRMNHKIMDWSSMEFY 506
Query: 368 DNKIFDSPNV 377
++K+ +V
Sbjct: 507 NSKMIADKSV 516
Score = 70 (29.7 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 19/43 (44%), Positives = 23/43 (53%)
Query: 205 LSSTLNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTV 247
++ LN SQ +A+L L V I GPPGTGKT TV
Sbjct: 231 INKGLNQSQKEAILFSLSSND------VACIHGPPGTGKTTTV 267
Score = 39 (18.8 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 1259 DKKSMMKFVKSFRSVDL 1275
DKKS + +K F +++L
Sbjct: 912 DKKSADELLKEFEAIEL 928
>UNIPROTKB|F1NWZ8 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0000076
"DNA replication checkpoint" evidence=IEA] [GO:0000729 "DNA
double-strand break processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0005634 GO:GO:0006284 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0017108 GO:GO:0043137 GO:GO:0005760
GO:GO:0043142 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AADN02028013 GeneTree:ENSGT00550000074852 OMA:EHESLCH
IPI:IPI00584167 Ensembl:ENSGALT00000006429 ArrayExpress:F1NWZ8
Uniprot:F1NWZ8
Length = 1009
Score = 140 (54.3 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 32/95 (33%), Positives = 53/95 (55%)
Query: 277 EQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFE 336
+Q F ++DEA+Q+ + PL + +L+GD QLP +V++S + + + SLF+
Sbjct: 772 KQFDFCIVDEASQISQPICLGPLFCS--KRFVLVGDHQQLPPLVQNSEARDLGMSESLFK 829
Query: 337 RLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKI 371
RL A L++QYRM+ I S N Y+ K+
Sbjct: 830 RLEQNQNAVVQLTVQYRMNSKIMSLSNKLVYEGKL 864
Score = 64 (27.6 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 23/79 (29%), Positives = 35/79 (44%)
Query: 205 LSSTLNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLLDFCFTKASLIFCT 264
L +LN Q QA+ L D+ LI G PGTGKT T+ L+ + T
Sbjct: 640 LKGSLNKPQKQAMKQVLLSR--DYT----LIVGMPGTGKTTTICALVRILSACGFSVLLT 693
Query: 265 ASSSYKLHRVAMEQLKFLV 283
+ + + + ++ KF V
Sbjct: 694 SFTHTAVDNILLKLAKFKV 712
Score = 41 (19.5 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 11/52 (21%), Positives = 23/52 (44%)
Query: 110 SVTKVTEDKNESDTTSTSFKVKASKENQIDGANKSLFAIFLTNVTSNTRIWN 161
S K TED + ++K EN+ + ++ + + ++ N IW+
Sbjct: 234 SFFKWTEDFVRNPANQNKMQLKLPSENKTGDCSSTVEIVDILDIEEN--IWS 283
Score = 38 (18.4 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 41 PFAQVVDLEDSKPYGAMLSDVKVDYWRNRF 70
PF + L P L ++ +D+ + RF
Sbjct: 591 PFENLSKLMKDSPVSEKLRNLIIDFHKPRF 620
Score = 37 (18.1 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 76 ESYKVLPGDILVL 88
ES V+PGDI+ L
Sbjct: 105 ESVPVVPGDIVHL 117
>ZFIN|ZDB-GENE-070912-617 [details] [associations]
symbol:si:dkey-97a13.6 "si:dkey-97a13.6"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 ZFIN:ZDB-GENE-070912-617
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391 EMBL:BX663525
IPI:IPI00499390 RefSeq:XP_699251.2 UniGene:Dr.89869
Ensembl:ENSDART00000017829 GeneID:570654 KEGG:dre:570654
NextBio:20890238 Uniprot:E7F3B1
Length = 2781
Score = 134 (52.2 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 36/112 (32%), Positives = 61/112 (54%)
Query: 260 LIFCTASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAM 319
L CTA++S L + + ++IDE A E ++ +PL + +L+GD QL +
Sbjct: 2473 LCTCTAAASPNLKKTL--SARQILIDECAMATEPQTLVPLVSFKPEKVVLLGDHKQLRPI 2530
Query: 320 VESSVSGEACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKI 371
V+++ + RSLFER + +A +L QYRMH I FP+ +Y++ +
Sbjct: 2531 VKNNHVRRLGMTRSLFERY--MDRAI-MLDTQYRMHEEICKFPSEAYYNDML 2579
Score = 64 (27.6 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 207 STLNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTV-SMLLDFCF-TKASLIFCT 264
S LN+ Q A+ L + D A LI+GP GTGKT + S + ++ ++ CT
Sbjct: 529 SQLNNKQQIALNFILGKCEDDKVAAPLLIYGPFGTGKTLCLASAAKELAHRSQNKVLICT 588
Query: 265 ASSS 268
++S
Sbjct: 589 YTNS 592
Score = 58 (25.5 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 28/89 (31%), Positives = 41/89 (46%)
Query: 942 VRKEISNYVGKQALVLTIVESKGLEFQ-VIHYTSQCCNSPFKHALFDSTSPGSFPSFNE- 999
+R+ +S++ K V TI +S+G E+Q VI + C S D P PS
Sbjct: 2667 IRERLSDFELKGFTVTTITKSQGSEWQYVILSIVRSCPS-------DEIEP--MPSREWL 2717
Query: 1000 AKHNVLCSELKQLYVAITRTRQRLWIWEN 1028
+KH + Q+ V ITR + L I N
Sbjct: 2718 SKHIGFVGDENQINVGITRAQVGLCILGN 2746
Score = 58 (25.5 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 209 LNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLLDFCFTK 257
LN+SQ +A+ L + K T+ I GPPGTGKT V + + F++
Sbjct: 2290 LNESQFKALEKAL-----NGKFTI--IQGPPGTGKT-VVGAYIVYWFSQ 2330
>UNIPROTKB|E2R760 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0032797 "SMN complex" evidence=IEA] [GO:0032575
"ATP-dependent 5'-3' RNA helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575
PANTHER:PTHR10887:SF23 EMBL:AAEX03011604 Ensembl:ENSCAFT00000038980
NextBio:20858044 Uniprot:E2R760
Length = 992
Score = 136 (52.9 bits), Expect = 0.00012, P = 0.00012
Identities = 50/152 (32%), Positives = 72/152 (47%)
Query: 243 KTKTVSMLLDFCFTKASLIFCT---ASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPL 299
K + + +L+ T A+++ T ASS L + +VIDE AQ E IPL
Sbjct: 330 KEREEAAMLE-SLTSAAVVLATNTGASSDGPLKLLPDTHFDVVVIDECAQALEASCWIPL 388
Query: 300 KLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERLSNLGQAK--HLLSIQYRMHPS 357
L + IL GD QLP S + A L SL ERL+ A+ L++QYRMH +
Sbjct: 389 -LKA-RKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEHGARVVRTLTVQYRMHQA 446
Query: 358 ISSFPNSYFYDNKIFDSPNVKEKNYEKRFLPG 389
I + + Y ++ P+V + R LPG
Sbjct: 447 IMRWASEALYHGQLTAHPSVA--GHLLRDLPG 476
>UNIPROTKB|E2R8W1 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
CTD:3508 OMA:HARQRIS PANTHER:PTHR10887:SF23 EMBL:AAEX03011604
RefSeq:XP_540807.2 Ensembl:ENSCAFT00000017093 GeneID:483686
KEGG:cfa:483686 Uniprot:E2R8W1
Length = 1010
Score = 136 (52.9 bits), Expect = 0.00012, P = 0.00012
Identities = 50/152 (32%), Positives = 72/152 (47%)
Query: 243 KTKTVSMLLDFCFTKASLIFCT---ASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPL 299
K + + +L+ T A+++ T ASS L + +VIDE AQ E IPL
Sbjct: 330 KEREEAAMLE-SLTSAAVVLATNTGASSDGPLKLLPDTHFDVVVIDECAQALEASCWIPL 388
Query: 300 KLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERLSNLGQAK--HLLSIQYRMHPS 357
L + IL GD QLP S + A L SL ERL+ A+ L++QYRMH +
Sbjct: 389 -LKA-RKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEHGARVVRTLTVQYRMHQA 446
Query: 358 ISSFPNSYFYDNKIFDSPNVKEKNYEKRFLPG 389
I + + Y ++ P+V + R LPG
Sbjct: 447 IMRWASEALYHGQLTAHPSVA--GHLLRDLPG 476
>UNIPROTKB|Q5ZKG3 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0032508 "DNA
duplex unwinding" evidence=ISS] [GO:0000076 "DNA replication
checkpoint" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0004518
"nuclease activity" evidence=ISS] [GO:0043139 "5'-3' DNA helicase
activity" evidence=ISS] [GO:0043142 "single-stranded DNA-dependent
ATPase activity" evidence=ISS] [GO:0017108 "5'-flap endonuclease
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0006264 "mitochondrial DNA
replication" evidence=ISS] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISS] [GO:0005760
"gamma DNA polymerase complex" evidence=ISS] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AJ720121 EMBL:AADN02028013 IPI:IPI00596013
RefSeq:NP_001006497.1 UniGene:Gga.42409 STRING:Q5ZKG3 GeneID:423688
KEGG:gga:423688 CTD:1763 HOGENOM:HOG000168456 HOVERGEN:HBG081456
KO:K10742 NextBio:20826122 Uniprot:Q5ZKG3
Length = 992
Score = 140 (54.3 bits), Expect = 0.00019, Sum P(5) = 0.00019
Identities = 32/95 (33%), Positives = 53/95 (55%)
Query: 277 EQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFE 336
+Q F ++DEA+Q+ + PL + +L+GD QLP +V++S + + + SLF+
Sbjct: 723 KQFDFCIVDEASQISQPICLGPLFCS--KRFVLVGDHQQLPPLVQNSEARDLGMSESLFK 780
Query: 337 RLSNLGQAKHLLSIQYRMHPSISSFPNSYFYDNKI 371
RL A L++QYRM+ I S N Y+ K+
Sbjct: 781 RLEQNQNAVVQLTVQYRMNSKIMSLSNKLVYEGKL 815
Score = 63 (27.2 bits), Expect = 0.00019, Sum P(5) = 0.00019
Identities = 24/88 (27%), Positives = 38/88 (43%)
Query: 205 LSSTLNDSQAQAVLSCLRRTHCDHKATVE---------LIWGPPGTGKTKTVSMLLDFCF 255
LSS L +AV S L+ + K ++ LI G PGTGKT T+ L+
Sbjct: 576 LSSVLPPEAKEAVASILKGLNKPQKQAMKQVLLSRDYTLIVGMPGTGKTTTICALVRILS 635
Query: 256 TKASLIFCTASSSYKLHRVAMEQLKFLV 283
+ T+ + + + ++ KF V
Sbjct: 636 ACGFSVLLTSFTHTAVDNILLKLAKFKV 663
Score = 42 (19.8 bits), Expect = 0.00019, Sum P(5) = 0.00019
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 998 NEAKHNVLCSELKQLYVAITRTRQRL 1023
N+ L + ++L VAITR + +L
Sbjct: 922 NDENLGALLKDWRRLNVAITRAKHKL 947
Score = 41 (19.5 bits), Expect = 0.00019, Sum P(5) = 0.00019
Identities = 11/52 (21%), Positives = 23/52 (44%)
Query: 110 SVTKVTEDKNESDTTSTSFKVKASKENQIDGANKSLFAIFLTNVTSNTRIWN 161
S K TED + ++K EN+ + ++ + + ++ N IW+
Sbjct: 186 SFFKWTEDFVRNPANQNKMQLKLPSENKTGDCSSTVEIVDILDIEEN--IWS 235
Score = 37 (18.1 bits), Expect = 0.00019, Sum P(5) = 0.00019
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 76 ESYKVLPGDILVL 88
ES V+PGDI+ L
Sbjct: 57 ESVPVVPGDIVHL 69
>UNIPROTKB|F1PYQ4 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:AAEX03002775 EMBL:AAEX03002776
EMBL:AAEX03002777 Ensembl:ENSCAFT00000036654 Uniprot:F1PYQ4
Length = 997
Score = 130 (50.8 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 32/91 (35%), Positives = 48/91 (52%)
Query: 281 FLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERLSN 340
F ++DEA+Q+ + PL Q +L+GD QLP +V + + + SLF+RL
Sbjct: 730 FCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQ 787
Query: 341 LGQAKHLLSIQYRMHPSISSFPNSYFYDNKI 371
A L++QYRM+ I S N YD K+
Sbjct: 788 NKNAVVQLTVQYRMNSKIMSLSNKLTYDGKL 818
Score = 68 (29.0 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 234 LIWGPPGTGKTKTVSMLLDFCFTKASLIFCTASSSYKLHRVAMEQLKFLV 283
LI G PGTGKT T+ L+ +T + T+ + + + ++ KF +
Sbjct: 617 LIVGMPGTGKTTTICTLVRILYTCGFSVLLTSYTHSAVDNILLKLAKFKI 666
Score = 38 (18.4 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 1005 LCSELKQLYVAITRTRQRL 1023
L + ++L VAITR + +L
Sbjct: 936 LLKDWRRLNVAITRAKHKL 954
>UNIPROTKB|F6UZP1 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH Ensembl:ENSCAFT00000021752
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Uniprot:F6UZP1
Length = 1021
Score = 130 (50.8 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 32/91 (35%), Positives = 48/91 (52%)
Query: 281 FLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERLSN 340
F ++DEA+Q+ + PL Q +L+GD QLP +V + + + SLF+RL
Sbjct: 726 FCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQ 783
Query: 341 LGQAKHLLSIQYRMHPSISSFPNSYFYDNKI 371
A L++QYRM+ I S N YD K+
Sbjct: 784 NKNAVVQLTVQYRMNSKIMSLSNKLTYDGKL 814
Score = 68 (29.0 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 234 LIWGPPGTGKTKTVSMLLDFCFTKASLIFCTASSSYKLHRVAMEQLKFLV 283
LI G PGTGKT T+ L+ +T + T+ + + + ++ KF +
Sbjct: 613 LIVGMPGTGKTTTICTLVRILYTCGFSVLLTSYTHSAVDNILLKLAKFKI 662
Score = 38 (18.4 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 1005 LCSELKQLYVAITRTRQRL 1023
L + ++L VAITR + +L
Sbjct: 962 LLKDWRRLNVAITRAKHKL 980
>UNIPROTKB|E2QSH2 [details] [associations]
symbol:E2QSH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
Ensembl:ENSCAFT00000021752 Uniprot:E2QSH2
Length = 1040
Score = 130 (50.8 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 32/91 (35%), Positives = 48/91 (52%)
Query: 281 FLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERLSN 340
F ++DEA+Q+ + PL Q +L+GD QLP +V + + + SLF+RL
Sbjct: 757 FCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQ 814
Query: 341 LGQAKHLLSIQYRMHPSISSFPNSYFYDNKI 371
A L++QYRM+ I S N YD K+
Sbjct: 815 NKNAVVQLTVQYRMNSKIMSLSNKLTYDGKL 845
Score = 68 (29.0 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 234 LIWGPPGTGKTKTVSMLLDFCFTKASLIFCTASSSYKLHRVAMEQLKFLV 283
LI G PGTGKT T+ L+ +T + T+ + + + ++ KF +
Sbjct: 644 LIVGMPGTGKTTTICTLVRILYTCGFSVLLTSYTHSAVDNILLKLAKFKI 693
Score = 38 (18.4 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 1005 LCSELKQLYVAITRTRQRL 1023
L + ++L VAITR + +L
Sbjct: 993 LLKDWRRLNVAITRAKHKL 1011
>TAIR|locus:2162858 [details] [associations]
symbol:AT5G35970 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] EMBL:CP002688 GO:GO:0009570 GO:GO:0003677
GO:GO:0009941 InterPro:IPR014001 SMART:SM00487 IPI:IPI00520082
RefSeq:NP_198446.3 UniGene:At.45828 ProteinModelPortal:F4K1G7
SMR:F4K1G7 PRIDE:F4K1G7 EnsemblPlants:AT5G35970.1 GeneID:833589
KEGG:ath:AT5G35970 OMA:DHFQREL Uniprot:F4K1G7
Length = 961
Score = 132 (51.5 bits), Expect = 0.00030, P = 0.00030
Identities = 44/125 (35%), Positives = 65/125 (52%)
Query: 256 TKASLIFCT-ASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPLKLPGIQHAILIGDEC 314
+ A ++F T ++ L R +E +VIDEA Q E IP+ L G + IL GD C
Sbjct: 639 SNAQVVFATNIGAADPLIR-RLETFDLVVIDEAGQSIEPSCWIPI-LQG-KRCILSGDPC 695
Query: 315 QLPAMVESSVSGEACLGRSLFERLSNL--GQAKHLLSIQYRMHPSISSFPNSYFYDNKIF 372
QL +V S + E LG SL ER ++L G L+ QYRM+ I+ + + Y +
Sbjct: 696 QLAPVVLSRKALEGGLGVSLLERAASLHDGVLATKLTTQYRMNDVIAGWASKEMYGGWLK 755
Query: 373 DSPNV 377
+P+V
Sbjct: 756 SAPSV 760
>UNIPROTKB|I3LBB7 [details] [associations]
symbol:I3LBB7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] InterPro:IPR026851 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:CU468421
Ensembl:ENSSSCT00000030264 OMA:STCHITH Uniprot:I3LBB7
Length = 249
Score = 122 (48.0 bits), Expect = 0.00037, P = 0.00037
Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 281 FLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERLSN 340
F ++DEA+Q+ + PL + +L+GD QLP +V + + + SLF+RL
Sbjct: 15 FCIVDEASQISQPICLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQ 72
Query: 341 LGQAKHLLSIQYRMHPSISSFPNSYFYDNKI 371
A L++QYRM+ I S N Y+ K+
Sbjct: 73 NKNAVVQLTVQYRMNSKIMSLSNKLTYEGKL 103
>FB|FBgn0051368 [details] [associations]
symbol:CG31368 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA;IC]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 EMBL:AE014297 GO:GO:0016787
GO:GO:0071011 GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 RefSeq:NP_996198.2 UniGene:Dm.10009
ProteinModelPortal:Q7KSN8 SMR:Q7KSN8 PaxDb:Q7KSN8
EnsemblMetazoa:FBtr0301042 GeneID:41437 KEGG:dme:Dmel_CG31368
UCSC:CG31368-RB FlyBase:FBgn0051368 InParanoid:Q7KSN8
OrthoDB:EOG43XSJ9 PhylomeDB:Q7KSN8 GenomeRNAi:41437 NextBio:823855
ArrayExpress:Q7KSN8 Bgee:Q7KSN8 Uniprot:Q7KSN8
Length = 1486
Score = 133 (51.9 bits), Expect = 0.00039, P = 0.00039
Identities = 55/186 (29%), Positives = 94/186 (50%)
Query: 257 KASLIFCTASSSYKLHRVAMEQLKF----LVIDEAAQLKEVESAIPLKL--P--GIQHA- 307
+A +I T + + L R + L F ++++E+AQ+ E+E+ IPL L P G+
Sbjct: 1047 EAKIIAMTCTHA-ALKRKELVNLGFRYDNILMEESAQILEIETFIPLLLQNPLDGLNRLK 1105
Query: 308 --ILIGDECQLPAMVESSVSGE-ACLGRSLFERLSNLGQAKHLLSIQYRMHPSISSFPNS 364
I+IGD QLP ++++ + + + +SLF RL LG L Q R SI S
Sbjct: 1106 RWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRLVRLGVPTVDLDGQGRARASICSL-YK 1164
Query: 365 YFYDNKIFDSPNVKEKNYEKRFLPGRMYGPYSFINVLD----GREESIAHSYRNMVEVFV 420
+ Y K+ D ++ E++ K+ PG ++ Y INV D G E + Y+N+ E
Sbjct: 1165 WRY-KKLEDLQHIFERDEYKQANPGFVHD-YQLINVEDFKGVGESEPNPYFYQNLAEAEY 1222
Query: 421 VMKILL 426
++ + +
Sbjct: 1223 IVAVYM 1228
>ZFIN|ZDB-GENE-040426-2419 [details] [associations]
symbol:helz "helicase with zinc finger"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR011539 InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 ZFIN:ZDB-GENE-040426-2419 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 GO:GO:0003676
GO:GO:0004386 eggNOG:COG1112 EMBL:BC066461 IPI:IPI00500029
RefSeq:NP_998431.1 UniGene:Dr.35354 ProteinModelPortal:Q6NYU2
GeneID:406550 KEGG:dre:406550 CTD:9931 HOGENOM:HOG000231202
HOVERGEN:HBG031603 OrthoDB:EOG4NP72K NextBio:20818112
ArrayExpress:Q6NYU2 Uniprot:Q6NYU2
Length = 1860
Score = 131 (51.2 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 52/184 (28%), Positives = 88/184 (47%)
Query: 260 LIFCTASSSYKLHRVAMEQLKF--LVIDEAAQLKEVESAIPLKLP-GIQHAILIGDECQL 316
++ T S+S L ++ +E F +++DEAAQ E E+ +PL L +L GD QL
Sbjct: 760 VVVVTLSTSQYLCQLDLEPGIFTHILLDEAAQAMECETIMPLALAVKSTRVVLAGDHMQL 819
Query: 317 PAMVESSVSGEACLGRSLFERLSNLGQAKH----LLSIQYRMHPSISSFPNSYFYDNKIF 372
V S + E L SL +RL +++ LL YR H +I ++ + FY+ K+
Sbjct: 820 SPFVYSEFARERNLHVSLLDRLYEHYPSEYPCRILLCENYRSHEAIINYTSDLFYEGKLM 879
Query: 373 DSPNVKEKNYEKRFLPGRMYGPYSFINVL-DGREESIAHSYRNMVEVFVVMKILLNLYKV 431
S K+ P + + P +F + +E + +Y N EVF +++ + + K
Sbjct: 880 ASG--KQP-------PHKDFYPLTFFTARGEDVQEKNSTAYYNNAEVFEIVERVEEMRKK 930
Query: 432 HNVS 435
VS
Sbjct: 931 WPVS 934
Score = 67 (28.6 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 27/94 (28%), Positives = 42/94 (44%)
Query: 179 DSVVKEDCELCPVQSDGIW--NDIFGPSLSSTLNDSQAQAVLSCLRRTHCDHKATVELIW 236
+S++ D L P W N + L LN Q +A+L+ T LI
Sbjct: 606 NSILFPDISLTPTIP---WSPNRQWDEQLDPRLNAKQKEAILAIT--TPLSINLPPVLII 660
Query: 237 GPPGTGKTKTVSMLLDFCFTK--ASLIFCTASSS 268
GP GTGKT T++ + + + ++ CT S+S
Sbjct: 661 GPYGTGKTFTLAQAVKHILKQPESRVLICTHSNS 694
Score = 43 (20.2 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 1913 IGNPLVLASLGDNCPKF 1929
+G+P+ L S+G C KF
Sbjct: 1041 VGDPIALCSVG-RCRKF 1056
>UNIPROTKB|E1BZJ8 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007281 "germ cell development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AADN02050039 EMBL:AADN02050037
EMBL:AADN02050038 IPI:IPI00585215 Ensembl:ENSGALT00000013959
ArrayExpress:E1BZJ8 Uniprot:E1BZJ8
Length = 1192
Score = 89 (36.4 bits), Expect = 0.00062, Sum P(4) = 0.00062
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 260 LIFCTASSSYKLHRVAMEQLKF--LVIDEAAQLKEVESAIPLKLPGIQHA--ILIGDECQ 315
+I T SS+ ++ F +++DEA Q E ES IP+ L + +L+GD Q
Sbjct: 866 IIITTCSSAGMFYQTGTRLGHFTHVILDEAGQASEPESLIPIGLISEVNGQIVLVGDPKQ 925
Query: 316 LPAMVESSVSGEACLGRSLFERL 338
L +++S ++ L SL ERL
Sbjct: 926 LGPLIKSRIAVAFGLNISLLERL 948
Score = 76 (31.8 bits), Expect = 0.00062, Sum P(4) = 0.00062
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 202 GPSLSSTLNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTV-SMLLDFCFT--KA 258
G + LN Q AV L C + T +++GPPGTGKT TV +L FT +
Sbjct: 745 GEFFNPMLNKQQKLAVKRILSG-EC--RPTPYILFGPPGTGKTITVVEAILQIHFTLPDS 801
Query: 259 SLIFCTASSS 268
++ C S++
Sbjct: 802 RILVCAPSNA 811
Score = 58 (25.5 bits), Expect = 0.00062, Sum P(4) = 0.00062
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 1115 SNPKQANVNLREAAKIFEAIGKADSAAK--CFYNLGEYERAGRIYL 1158
SNPK+ NV + A + IG K CF L EY Y+
Sbjct: 1134 SNPKRFNVAITRAKALLIVIGNPHLLVKDPCFCALLEYSLMNNAYI 1179
Score = 58 (25.5 bits), Expect = 0.00062, Sum P(4) = 0.00062
Identities = 25/90 (27%), Positives = 43/90 (47%)
Query: 352 YRMHPSISSFPNSYFYDNKI---FDSPNVKEK-NYEKRFLPGRMYGPYSFINVLDGREES 407
YR H ++ + P+ FY ++ D+ V ++EK LP + + P F V G+E
Sbjct: 979 YRSHSALLALPSKLFYHKELEVCADTSVVSSLLHWEK--LPRKGF-PLIFHGVR-GKETR 1034
Query: 408 IAHS--YRNMVEVFVVMKILLNLYKVHNVS 435
HS + N E VM+ +L K +++
Sbjct: 1035 EGHSPSWFNPTEAVQVMQYCCHLAKNESIA 1064
>UNIPROTKB|Q8QHA5 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8355 "Xenopus laevis" [GO:0000076
"DNA replication checkpoint" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0004518 "nuclease activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0006264
"mitochondrial DNA replication" evidence=ISS] [GO:0006284
"base-excision repair" evidence=ISS] [GO:0016890 "site-specific
endodeoxyribonuclease activity, specific for altered base"
evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] InterPro:IPR026851 InterPro:IPR014808
Pfam:PF08696 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0016890 GO:GO:0045740 GO:GO:0000729 GO:GO:0017108
GO:GO:0000076 GO:GO:0043137 GO:GO:0043139 GO:GO:0043142
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOVERGEN:HBG081456
KO:K10742 EMBL:AF474372 RefSeq:NP_001079231.1 UniGene:Xl.17390
ProteinModelPortal:Q8QHA5 GeneID:378492 KEGG:xla:378492
Xenbase:XB-GENE-5829000 Uniprot:Q8QHA5
Length = 1053
Score = 133 (51.9 bits), Expect = 0.00078, Sum P(4) = 0.00078
Identities = 30/91 (32%), Positives = 51/91 (56%)
Query: 281 FLVIDEAAQLKEVESAIPLKLPGIQHAILIGDECQLPAMVESSVSGEACLGRSLFERLSN 340
F ++DEA+Q+ + PL +L+GD QLP +V+S+ + E + SLF+RL
Sbjct: 759 FCIVDEASQISQPICLGPLFFA--DRFVLVGDHQQLPPLVKSAEARELGMSESLFKRLER 816
Query: 341 LGQAKHLLSIQYRMHPSISSFPNSYFYDNKI 371
+A L++QYRM+ I + N Y+ ++
Sbjct: 817 NQEAVVQLTVQYRMNSKIMALSNKLVYEGRL 847
Score = 65 (27.9 bits), Expect = 0.00078, Sum P(4) = 0.00078
Identities = 23/80 (28%), Positives = 36/80 (45%)
Query: 204 SLSSTLNDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLLDFCFTKASLIFC 263
S+ LN Q QA ++R T LI G PGTGKT T+ L+ + +
Sbjct: 622 SILRGLNKPQKQA----MKRVLLSKDYT--LIVGMPGTGKTTTICTLVRILYACGFSVLL 675
Query: 264 TASSSYKLHRVAMEQLKFLV 283
T+ + + + ++ KF V
Sbjct: 676 TSYTHSAVDNILLKLKKFQV 695
Score = 39 (18.8 bits), Expect = 0.00078, Sum P(4) = 0.00078
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 173 KELLCTDSVVKEDCELCPVQSDGI 196
K L T S +D ELC ++ D +
Sbjct: 69 KHLTITASQEGDDLELCILKDDWV 92
Score = 39 (18.8 bits), Expect = 0.00078, Sum P(4) = 0.00078
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 993 SFPSFN-EAKHNVLCSELKQLYVAITRTRQRL 1023
SF N + K L + ++L VA+TR + +L
Sbjct: 981 SFVRSNIDGKLGDLLKDWRRLNVALTRAKHKL 1012
>UNIPROTKB|E1BY42 [details] [associations]
symbol:E1BY42 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IEA] [GO:0032797 "SMN complex"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51061 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:AADN02040052 EMBL:AADN02040053
IPI:IPI00595444 Ensembl:ENSGALT00000006901 Uniprot:E1BY42
Length = 976
Score = 144 (55.7 bits), Expect = 0.00090, Sum P(3) = 0.00089
Identities = 48/140 (34%), Positives = 68/140 (48%)
Query: 256 TKASLIFCT---ASSSYKLHRVAMEQLKFLVIDEAAQLKEVESAIPL-KLPGIQHAILIG 311
T AS++ T ASS L + +VIDE AQ E IPL K P IL G
Sbjct: 339 THASVVLATNTGASSDGPLKLLPENYFDLVVIDECAQALEASCWIPLLKAP---KCILAG 395
Query: 312 DECQLPAMVESSVSGEACLGRSLFER-LSNLGQ-AKHLLSIQYRMHPSISSFPNSYFYDN 369
D QLP + S + L SL ER + G+ +L++QYRMH +I + +S Y
Sbjct: 396 DHKQLPPTIISHKAAAKGLSLSLMERVIERYGEKVVKMLTVQYRMHEAIMQWASSEMYGG 455
Query: 370 KIFDSPNVKEKNYEKRFLPG 389
++ P+V + + + LPG
Sbjct: 456 RLTAHPSVAQ--HLLKDLPG 473
Score = 43 (20.2 bits), Expect = 0.00090, Sum P(3) = 0.00089
Identities = 25/92 (27%), Positives = 37/92 (40%)
Query: 1075 LFHEHNYDMATICFEKAKDSYWEGRSKATG--LKATADRCRSSNPK-QANVNLREAAKIF 1131
L EH + + + +D Y R K G + A A R +P Q + +EA
Sbjct: 747 LAEEHG--LQHVSTGEGRDRYISVRKKEFGQAVVAPAATQREQHPPPQPQDSSKEAPAPA 804
Query: 1132 EAIGKADSAAKCFYNLGEYERAGRIYLERREE 1163
E G+++ + K ER R RREE
Sbjct: 805 EPGGRSEGSGKVDLKRLHLERVQR-EKARREE 835
Score = 42 (19.8 bits), Expect = 0.00090, Sum P(3) = 0.00089
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 22 LLEETRAQLSSSMEKISEAPFAQVVDLEDSKPYGAMLSDVK 62
L AQ+ + + K + FA+ +D G LS++K
Sbjct: 280 LARSDSAQIVADVRKDIDQAFAKSKKAQDKGERGHFLSEIK 320
>UNIPROTKB|F1NNW1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA] GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 OMA:VRFFKLD IPI:IPI00594294
EMBL:AADN02045008 Ensembl:ENSGALT00000002368 Uniprot:F1NNW1
Length = 735
Score = 98 (39.6 bits), Expect = 0.00095, Sum P(3) = 0.00095
Identities = 45/158 (28%), Positives = 69/158 (43%)
Query: 308 ILIGDECQLPAMVESSVSGEACLGRSLFERLS--NLGQAKH----------LLSIQYRMH 355
+L GD QL ++ S ++ + LG SL ERL N AK L YR H
Sbjct: 439 VLAGDPQQLGPVLRSPLAAQHGLGTSLLERLMLHNALYAKSDEGYNPQFVTKLLWNYRSH 498
Query: 356 PSISSFPNSYFYDN--KIFDSPNVKEKNYEKRF--LPGRMYGPYSFINVL-DGREESIAH 410
+I PN FYD+ K ++ +N+ + LP R P F V + E+ +
Sbjct: 499 KAILKVPNELFYDSELKAYEGSEPDVRNFYCTWEELPNRGV-PIIFHGVCGEDEREAKSP 557
Query: 411 SYRNMVEVFVVMKILLNLYKVHNVSNLCSSLMKKCINV 448
S+ N E+ VV++ L L + C ++ K I +
Sbjct: 558 SFFNTAEIEVVVQYLQKLLQSQGRRG-CPTISPKEIGI 594
Score = 82 (33.9 bits), Expect = 0.00095, Sum P(3) = 0.00095
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 210 NDSQAQAVLSCLRRTHCDHKATVELIWGPPGTGKTKTVSMLLD---FCFTKASLIFCTAS 266
N+ Q QAV + T A LI+GPPGTGKT T+ + CF A ++ C S
Sbjct: 260 NEEQCQAVKHIV--TGMSRPAPY-LIFGPPGTGKTVTLVEAIKQVWSCFKDARILACAPS 316
Query: 267 SS 268
+S
Sbjct: 317 NS 318
Score = 46 (21.3 bits), Expect = 0.00095, Sum P(3) = 0.00095
Identities = 18/55 (32%), Positives = 24/55 (43%)
Query: 1116 NPKQANVNLREAAKIFEAIGKADSAAKC--FYNLGEY---ERAGRIYLERREEPE 1165
NPK+ NV L A + +G A +K ++ Y E A R Y E PE
Sbjct: 666 NPKRLNVALTRAKALLIVVGNAAVLSKDPHWHRFLRYCRDEGAYRGYPYEEEPPE 720
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1939 1869 0.00098 125 3 11 22 0.38 34
40 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 101
No. of states in DFA: 641 (68 KB)
Total size of DFA: 823 KB (2344 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 147.39u 0.81s 148.20t Elapsed: 00:00:11
Total cpu time: 147.42u 0.81s 148.23t Elapsed: 00:00:12
Start: Fri May 10 05:48:12 2013 End: Fri May 10 05:48:24 2013
WARNINGS ISSUED: 1