Query 035725
Match_columns 86
No_of_seqs 100 out of 113
Neff 3.9
Searched_HMMs 13730
Date Mon Mar 25 09:28:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035725.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/035725hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ogqa1 d.223.1.2 (A:371-494) 48.7 1.6 0.00012 28.0 -0.2 14 72-85 48-61 (124)
2 d2axtm1 f.23.35.1 (M:1-36) Pho 48.7 0.75 5.4E-05 24.5 -1.5 14 59-72 6-19 (36)
3 d1s12a_ d.64.2.1 (A:) Hypothet 38.2 17 0.0012 21.7 3.6 49 13-61 18-76 (94)
4 d2pspa1 g.16.1.1 (A:1-53) Panc 23.3 15 0.0011 20.0 1.3 13 33-45 40-52 (53)
5 d2pspa2 g.16.1.1 (A:54-106) Pa 19.3 21 0.0015 19.4 1.2 14 33-46 36-49 (53)
6 d1e9ta_ g.16.1.1 (A:) Intestin 17.9 25 0.0018 19.4 1.4 14 33-46 42-55 (59)
7 d1w2fa_ d.143.1.3 (A:) Inosito 13.5 14 0.001 24.9 -0.6 15 6-20 222-236 (276)
8 d2ifxa1 d.58.4.19 (A:1-108) Hy 13.0 27 0.002 21.6 0.7 14 1-14 31-44 (108)
9 d1d1da1 a.28.3.1 (A:151-230) R 11.2 36 0.0026 19.7 0.8 23 37-59 40-62 (80)
10 d2ptha_ c.56.3.1 (A:) Peptidyl 10.4 23 0.0017 23.4 -0.4 10 70-79 15-24 (193)
No 1
>d2ogqa1 d.223.1.2 (A:371-494) Serine/threonine-protein kinase plk C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.72 E-value=1.6 Score=27.96 Aligned_cols=14 Identities=21% Similarity=0.653 Sum_probs=11.8
Q ss_pred CCCccccCCCCCCC
Q 035725 72 TRRHGIGYPITPGK 85 (86)
Q Consensus 72 t~RhGIGyp~~~~~ 85 (86)
|++|||||..+.|.
T Consensus 48 S~KyGlgY~LSdgt 61 (124)
T d2ogqa1 48 SDKYGLGYQLCDNS 61 (124)
T ss_dssp TTTTEEEEEETTSC
T ss_pred CCCceEEEEEcCCc
Confidence 78999999888764
No 2
>d2axtm1 f.23.35.1 (M:1-36) Photosystem II reaction center protein M, PsbM {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=48.66 E-value=0.75 Score=24.48 Aligned_cols=14 Identities=50% Similarity=1.061 Sum_probs=12.4
Q ss_pred HHHhhhheeeecCC
Q 035725 59 IGLICSLLFVIFPT 72 (86)
Q Consensus 59 vG~~~S~vF~iFPt 72 (86)
.|++++.+|++.||
T Consensus 6 Lg~iAt~LFilvPt 19 (36)
T d2axtm1 6 LGLIATALFVLVPS 19 (36)
T ss_dssp THHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 48999999999886
No 3
>d1s12a_ d.64.2.1 (A:) Hypothetical protein TM1457 {Thermotoga maritima [TaxId: 2336]}
Probab=38.22 E-value=17 Score=21.70 Aligned_cols=49 Identities=14% Similarity=0.050 Sum_probs=37.9
Q ss_pred cchhhHHHHHHHHHHHHHhcc----------CCcccccCCCCCccHHHHHHHhhhHHHH
Q 035725 13 FIDGVHAVLSVLVFAAVALRD----------KNVLSCFFPTPKHETQEVLDIVPVGIGL 61 (86)
Q Consensus 13 ~~DfvHA~lS~~VF~avAl~D----------~nvv~Cf~P~~~~~~~~ll~~lPl~vG~ 61 (86)
..|.|=|..|++++.++--.+ .+-..|-+|..+++.+.+|+++=++.--
T Consensus 18 G~DIVCAaVS~l~~~~vN~l~~~~~~~~~~~~G~l~~~~~~~~~~~q~ll~~m~~gL~~ 76 (94)
T d1s12a_ 18 PDKTLCASVSLLTQHVANFLKAEKKAKIKKESGYLKVKFEELENCEVKVLAAMVRSLKE 76 (94)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTSEEEEEETTEEEEEECSCCHHHHHHHHHHHHHHHH
T ss_pred CCceeehhhHHHHHHHHHHHHHHhCCcEEeeCCEEEEEECCCCHHHHHHHHHHHHHHHH
Confidence 459999999999999886443 2336788899888888888887666543
No 4
>d2pspa1 g.16.1.1 (A:1-53) Pancreatic spasmolytic polypeptide {Pig (Sus scrofa) [TaxId: 9823]}
Probab=23.26 E-value=15 Score=19.98 Aligned_cols=13 Identities=38% Similarity=0.600 Sum_probs=9.8
Q ss_pred cCCcccccCCCCC
Q 035725 33 DKNVLSCFFPTPK 45 (86)
Q Consensus 33 D~nvv~Cf~P~~~ 45 (86)
..|+--||||..+
T Consensus 40 ~~~~PwCfyP~~~ 52 (53)
T d2pspa1 40 VPGVPWCFKPLPA 52 (53)
T ss_dssp STTSCSEECCCCC
T ss_pred CCCCCcCcccCCC
Confidence 4577789999765
No 5
>d2pspa2 g.16.1.1 (A:54-106) Pancreatic spasmolytic polypeptide {Pig (Sus scrofa) [TaxId: 9823]}
Probab=19.30 E-value=21 Score=19.39 Aligned_cols=14 Identities=36% Similarity=0.617 Sum_probs=10.4
Q ss_pred cCCcccccCCCCCc
Q 035725 33 DKNVLSCFFPTPKH 46 (86)
Q Consensus 33 D~nvv~Cf~P~~~~ 46 (86)
+.|+--||||....
T Consensus 36 ~~~~PwCfyp~~~~ 49 (53)
T d2pspa2 36 IPEVPWCFFPMSVE 49 (53)
T ss_dssp STTSCSEECCCCGG
T ss_pred CCCCCcCccCCCcc
Confidence 46777899998654
No 6
>d1e9ta_ g.16.1.1 (A:) Intestinal trefoil factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.86 E-value=25 Score=19.36 Aligned_cols=14 Identities=29% Similarity=0.370 Sum_probs=9.7
Q ss_pred cCCcccccCCCCCc
Q 035725 33 DKNVLSCFFPTPKH 46 (86)
Q Consensus 33 D~nvv~Cf~P~~~~ 46 (86)
+.|+-.||||....
T Consensus 42 ~~~~PwCfyp~~~~ 55 (59)
T d1e9ta_ 42 IPGVPWCFKPLQEA 55 (59)
T ss_dssp CTTSCSSBCCCCCC
T ss_pred CCCCccccccCCcc
Confidence 45666799997654
No 7
>d1w2fa_ d.143.1.3 (A:) Inositol 1,4,5-trisphosphate 3-kinase A, IP3K A {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.47 E-value=14 Score=24.89 Aligned_cols=15 Identities=13% Similarity=0.093 Sum_probs=12.3
Q ss_pred ccccccccchhhHHH
Q 035725 6 LNKYRIRFIDGVHAV 20 (86)
Q Consensus 6 ~s~yrLr~~DfvHA~ 20 (86)
.++.++|.|||.|+.
T Consensus 222 ~~~~~v~lIDFAh~~ 236 (276)
T d1w2fa_ 222 CHRAGVWLIDFGKTT 236 (276)
T ss_dssp TCCEEEEEECCTEEE
T ss_pred CCcCcEEEEecccce
Confidence 367899999999954
No 8
>d2ifxa1 d.58.4.19 (A:1-108) Hypothetical protein Reut_A1503 {Ralstonia eutropha [TaxId: 106590]}
Probab=13.04 E-value=27 Score=21.62 Aligned_cols=14 Identities=50% Similarity=1.182 Sum_probs=11.7
Q ss_pred CCCCCccccccccc
Q 035725 1 HDLPDLNKYRIRFI 14 (86)
Q Consensus 1 ~~~~~~s~yrLr~~ 14 (86)
||+|.+-||.+|..
T Consensus 31 ~~~pglhkyevrlv 44 (108)
T d2ifxa1 31 HDVPGLHKYEVRLV 44 (108)
T ss_dssp TTCTTCCEEEEEEE
T ss_pred cCCCcceeeeEEEe
Confidence 78999999988863
No 9
>d1d1da1 a.28.3.1 (A:151-230) RSV capsid protein {Rous sarcoma virus [TaxId: 11886]}
Probab=11.23 E-value=36 Score=19.74 Aligned_cols=23 Identities=17% Similarity=0.547 Sum_probs=19.7
Q ss_pred ccccCCCCCccHHHHHHHhhhHH
Q 035725 37 LSCFFPTPKHETQEVLDIVPVGI 59 (86)
Q Consensus 37 v~Cf~P~~~~~~~~ll~~lPl~v 59 (86)
-.|.+.++.++-|++|+++|-+.
T Consensus 40 ~~L~~qNANpdCk~iLral~~~~ 62 (80)
T d1d1da1 40 IDCFRQKSQPDIQQLIRAAPSTL 62 (80)
T ss_dssp HHHHTTSSCHHHHHHHHTSCTTC
T ss_pred HHHHHHhcCHHHHHHHHhCCCCC
Confidence 46899999999999999998653
No 10
>d2ptha_ c.56.3.1 (A:) Peptidyl-tRNA hydrolase {Escherichia coli [TaxId: 562]}
Probab=10.43 E-value=23 Score=23.37 Aligned_cols=10 Identities=30% Similarity=0.684 Sum_probs=8.1
Q ss_pred cCCCCccccC
Q 035725 70 FPTRRHGIGY 79 (86)
Q Consensus 70 FPt~RhGIGy 79 (86)
+..|||-|||
T Consensus 15 Y~~TRHNiG~ 24 (193)
T d2ptha_ 15 YAATRHNAGA 24 (193)
T ss_dssp TTTSGGGHHH
T ss_pred hCcCchHHHH
Confidence 3579999997
Done!