BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035729
(208 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4KLT0|RN217_XENLA Probable E3 ubiquitin-protein ligase RNF217 OS=Xenopus laevis
GN=rnf217 PE=2 SV=1
Length = 282
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 83/198 (41%), Gaps = 38/198 (19%)
Query: 24 FTCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECPGLNCQKNLDP 83
+C +C+E ++ K C P C EC+ +Y+ VQ A+I+CP C K+LD
Sbjct: 1 MSCRVCLE----DRSIKPLPCCKKPVCDECLKRYLSSQVQLGQ-AEIQCPITECNKHLDE 55
Query: 84 FSCKPMIPSSLFSKWCDLL--------------CEDYVRGYERSYCPNRNCMALVVNECE 129
+ +P K+ L C+ + +++ PN
Sbjct: 56 STILYSLPHDDIIKYKYFLELSRMDSSTKPCPQCKHFTTFKRKTHIPNPT---------- 105
Query: 130 RKGRMKKAQCPNCKHWFCFRCKLKWHGGYHCEE--SGNLRDR---NDIAFGQLAERMKWA 184
+ K QCP+C+ +CFRC WH G +C E G+ R N+I GQ +
Sbjct: 106 KSENKLKIQCPSCQFIWCFRCHAPWHEGVNCREYKKGDKLLRHWANEIEHGQRNAQ---- 161
Query: 185 RCPGCGHCVQRKNGCHVM 202
+CP C +QR GC M
Sbjct: 162 KCPRCKVHIQRTEGCDHM 179
>sp|Q9JI90|RNF14_MOUSE E3 ubiquitin-protein ligase RNF14 OS=Mus musculus GN=Rnf14 PE=2
SV=2
Length = 485
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 36/222 (16%)
Query: 11 NRGRQEEEGNGSSFTCEICI-EPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAK 69
N+ RQ + N F C IC E + ++ + + C H +C+ C+ Y ++ ++D
Sbjct: 206 NQARQTKCFNSKLFLCSICFCEKLGSDCMYFLE--CKHVYCKACLKDYFEIQIKDGQVKC 263
Query: 70 IECPGLNCQKNLDPFSCKPMIPSSLFSKWCDLLCEDYVRGY-ERSYCPNRNCMALVVNEC 128
+ CP C P K ++ + LF+++ LL + + + YCP R C L V +
Sbjct: 264 LNCPEPQCPSVATPGQVKELVEADLFARYDRLLLQSTLDLMADVVYCP-RPCCQLPVMQ- 321
Query: 129 ERKGRMKKAQCPNCKHWFCFRCKLKWHGGYHCEESG----NLRD---RNDIAFGQLAERM 181
E G M A C +C FC C+L +HG C+ + +LR+ + D A + E+
Sbjct: 322 EPGGTM--AICSSCNFAFCTLCRLTYHGLSPCKVTAEKLIDLRNEYLQADEATKRFLEQR 379
Query: 182 KWAR---------------------CPGCGHCVQRKNGCHVM 202
R CP CG +Q+ +GC+ M
Sbjct: 380 YGKRVIQKALEEMESKDWLEKNSKSCPCCGTPIQKLDGCNKM 421
>sp|A4IIY1|R144A_XENTR Probable E3 ubiquitin-protein ligase RNF144A OS=Xenopus tropicalis
GN=rnf144a PE=2 SV=1
Length = 292
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 1 MGNSLQRPTENRGRQEEEGNGSSFTCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQV 60
M + RPT + + +C++C+ ++ C FC C+ +Y+++
Sbjct: 1 MTTARYRPTWDLALE------PLVSCKLCLGEYTV-EQMTTIAQCQCIFCTLCLKQYVEL 53
Query: 61 MVQDNNTAKIECPGLNCQK--NLDPFSCKPMIPSSLFSKWCDLLCE-DYVRGYERSYCPN 117
++++ I CP +C K +L + M+ + + K+ L E + + R++CP+
Sbjct: 54 LIKEGLETAISCPDASCPKRGHLQENEIECMVAAEIMQKYKKLQFEKEILLDPCRTWCPS 113
Query: 118 RNCMALVVNECERKGRM--KKAQCPNCKHWFCFRCKLKWHGGYHCEES---GNLRDRNDI 172
+C A V + + KG + QC C FC CK WH G C E+ L +
Sbjct: 114 SSCQA--VCKLQEKGIQNPQLVQCSACDIEFCSACKANWHPGQGCPENMAITFLPGDSSS 171
Query: 173 AFGQLAERMKWARCPGCGHCVQRKNGCHVM 202
F L + + RCP C ++R GC M
Sbjct: 172 FFKSLEDDVPIKRCPKCKVYIERDEGCAQM 201
>sp|P50876|R144A_HUMAN Probable E3 ubiquitin-protein ligase RNF144A OS=Homo sapiens
GN=RNF144A PE=1 SV=2
Length = 292
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 6/160 (3%)
Query: 49 FCQECIAKYIQVMVQDNNTAKIECPGLNC--QKNLDPFSCKPMIPSSLFSKWCDLLCEDY 106
FC C+ +Y+++++++ I CP C Q +L + M+ + + ++ L E
Sbjct: 42 FCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIECMVAAEIMQRYKKLQFERE 101
Query: 107 VRGYE-RSYCPNRNCMALVVNECERKGRMKKAQCPNCKHWFCFRCKLKWHGGYHCEES-- 163
V R++CP C A+ + + QC C+ FC CK WH G C E+
Sbjct: 102 VLFDPCRTWCPASTCQAVCQLQDVGLQTPQPVQCKACRMEFCSTCKASWHPGQGCPETMP 161
Query: 164 -GNLRDRNDIAFGQLAERMKWARCPGCGHCVQRKNGCHVM 202
L AF + RCP C ++R GC M
Sbjct: 162 ITFLPGETSAAFKMEEDDAPIKRCPKCKVYIERDEGCAQM 201
>sp|O95376|ARI2_HUMAN E3 ubiquitin-protein ligase ARIH2 OS=Homo sapiens GN=ARIH2 PE=1
SV=1
Length = 493
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 20/169 (11%)
Query: 45 CTHPFCQECIAKYIQVMVQDNNTAKIECPGLNCQKNLDPFSCKPMIPSS-LFSKWCDLLC 103
C H FC+ C ++ V+V+D + C +C P++P+ L K+ L
Sbjct: 156 CQHQFCRSCWEQHCSVLVKDGVGVGVSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLF 215
Query: 104 EDYVRG-YERSYCPNRNC-MALVVNECERKGRMKKAQCPNCKHWFCFRCKLKWHGGYHCE 161
DYV Y+ CP +C M + V E R ++ QC C FCF+C+ +H C
Sbjct: 216 RDYVESHYQLQLCPGADCPMVIRVQE----PRARRVQCNRCNEVFCFKCRQMYHAPTDC- 270
Query: 162 ESGNLR-------DRNDIAFGQLAERMKWARCPGCGHCVQRKNGCHVMQ 203
+R D ++ A ++ K CP C C+++ GC+ MQ
Sbjct: 271 --ATIRKWLTKCADDSETA-NYISAHTK--DCPKCNICIEKNGGCNHMQ 314
>sp|Q9Z1K6|ARI2_MOUSE E3 ubiquitin-protein ligase ARIH2 OS=Mus musculus GN=Arih2 PE=2
SV=1
Length = 492
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 20/169 (11%)
Query: 45 CTHPFCQECIAKYIQVMVQDNNTAKIECPGLNCQKNLDPFSCKPMIPSS-LFSKWCDLLC 103
C H FC+ C ++ V+V+D I C +C P++P+ L K+ L
Sbjct: 155 CQHQFCRSCWEQHCSVLVKDGVGVGISCMAQDCPLRTPEDFVFPLLPNEELRDKYRRYLF 214
Query: 104 EDYVRG-YERSYCPNRNC-MALVVNECERKGRMKKAQCPNCKHWFCFRCKLKWHGGYHCE 161
DYV ++ CP +C M + V E R ++ QC C FCF+C+ +H C
Sbjct: 215 RDYVESHFQLQLCPGADCPMVIRVQE----PRARRVQCNRCSEVFCFKCRQMYHAPTDC- 269
Query: 162 ESGNLR-------DRNDIAFGQLAERMKWARCPGCGHCVQRKNGCHVMQ 203
+R D ++ A ++ K CP C C+++ GC+ MQ
Sbjct: 270 --ATIRKWLTKCADDSETA-NYISAHTK--DCPKCNICIEKNGGCNHMQ 313
>sp|A5PK27|R144B_BOVIN E3 ubiquitin-protein ligase RNF144B OS=Bos taurus GN=RNF144B PE=2
SV=1
Length = 304
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 7/184 (3%)
Query: 24 FTCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECPGLNC--QKNL 81
TC++C+ + +K + C FC C+ +Y+Q+ +++ + I CP + C L
Sbjct: 29 VTCKLCLCEQSLDKMTTLQE-CRCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTL 87
Query: 82 DPFSCKPMIPSSLFSKWCDLLCEDYVRGYE-RSYCPNRNCMALVVNECERKGRMKKAQCP 140
++P F + L E V R++CP +C + G+ +CP
Sbjct: 88 QEAEIACLVPVDQFQLYQRLKFEREVHLDPCRTWCPVADCQTVCPVATSDPGQPVLVECP 147
Query: 141 NCKHWFCFRCKLKWHGGYHCEES--GNLRDRNDIAFGQLAERMKWARCPGCGHCVQRKNG 198
+C FC CK WH C +S G L + FG + +CP C ++R G
Sbjct: 148 SCHLKFCSCCKDAWHAEVSCRDSQPGILPTEHGTLFGTETDA-PIKQCPVCRVYIERNEG 206
Query: 199 CHVM 202
C M
Sbjct: 207 CAQM 210
>sp|Q7Z419|R144B_HUMAN E3 ubiquitin-protein ligase RNF144B OS=Homo sapiens GN=RNF144B PE=1
SV=1
Length = 303
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 7/184 (3%)
Query: 24 FTCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECPGLNC--QKNL 81
TC++C+ + +K + C FC C+ +Y+Q+ +++ + I CP + C L
Sbjct: 28 ITCKLCLCEQSLDKMTTLQE-CQCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTL 86
Query: 82 DPFSCKPMIPSSLFSKWCDLLCEDYVR-GYERSYCPNRNCMALVVNECERKGRMKKAQCP 140
++P F + L E V R++CP +C + G+ +CP
Sbjct: 87 QEAEIACLVPVDQFQLYQRLKFEREVHLDPYRTWCPVADCQTVCPVASSDPGQPVLVECP 146
Query: 141 NCKHWFCFRCKLKWHGGYHCEESGN--LRDRNDIAFGQLAERMKWARCPGCGHCVQRKNG 198
+C FC CK WH C +S L + FG AE +CP C ++R G
Sbjct: 147 SCHLKFCSCCKDAWHAEVSCRDSQPIVLPTEHRALFGTDAEA-PIKQCPVCRVYIERNEG 205
Query: 199 CHVM 202
C M
Sbjct: 206 CAQM 209
>sp|Q925F3|R144A_MOUSE Probable E3 ubiquitin-protein ligase RNF144A OS=Mus musculus
GN=Rnf144a PE=1 SV=1
Length = 292
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 7/184 (3%)
Query: 25 TCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECPGLNC--QKNLD 82
+C++C+ A ++ C FC C+ +Y+++++++ I CP C Q +L
Sbjct: 19 SCKLCLGEYPA-EQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQ 77
Query: 83 PFSCKPMIPSSLFSKWCDLLCEDYVRGYE-RSYCPNRNCMALVVNECERKGRMKKAQCPN 141
+ M+ + + ++ L E V R++CP C A+ + + QC
Sbjct: 78 ENEIECMVAAEIMQRYKKLQFEREVLFDPCRTWCPASTCQAVCQLQDIGLQTPQLVQCKA 137
Query: 142 CKHWFCFRCKLKWHGGYHCEES---GNLRDRNDIAFGQLAERMKWARCPGCGHCVQRKNG 198
C FC CK +WH G C E+ L AF RCP C ++R G
Sbjct: 138 CDMEFCSACKARWHPGQGCPETMPITFLPGETSSAFKMEEGDAPIKRCPKCRVYIERDEG 197
Query: 199 CHVM 202
C M
Sbjct: 198 CAQM 201
>sp|Q8BKD6|R144B_MOUSE E3 ubiquitin-protein ligase RNF144B OS=Mus musculus GN=Rnf144b PE=2
SV=2
Length = 301
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 5/182 (2%)
Query: 24 FTCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECPGLNC--QKNL 81
TC++C+ + +K + C FC C+ +Y+ + +++ + I CP + C L
Sbjct: 28 VTCKLCLCEQSLDKMTMLQE-CQCIFCTPCLKQYMVLSIREGCGSPITCPDMVCLNHGTL 86
Query: 82 DPFSCKPMIPSSLFSKWCDLLCEDYVR-GYERSYCPNRNCMALVVNECERKGRMKKAQCP 140
++P F + L E V R++CP +C + G+ +CP
Sbjct: 87 QETEIACLVPLDEFQLYQRLKFEREVHMDPLRTWCPVADCQTVCHISAGDPGQPVLVECP 146
Query: 141 NCKHWFCFRCKLKWHGGYHCEESGNLRDRNDIAFGQLAERMKWARCPGCGHCVQRKNGCH 200
+C FC CK WH C +S + + FG A+ +CP C ++R GC
Sbjct: 147 SCHLKFCSCCKDAWHEESSCRDSQSAMPEHGALFGTDADA-PIKQCPVCRIYIERNEGCA 205
Query: 201 VM 202
M
Sbjct: 206 QM 207
>sp|Q5RFV4|R1441_DANRE Probable E3 ubiquitin-protein ligase RNF144A-A OS=Danio rerio
GN=rnf144aa PE=3 SV=1
Length = 293
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 7/161 (4%)
Query: 49 FCQECIAKYIQVMVQDNNTAKIECPGLNCQK--NLDPFSCKPMIPSSLFSKWCDLLCE-D 105
FC C+ +Y+++++++ I CP C K +L + M+ + + ++ L E +
Sbjct: 42 FCTMCLKQYVELLIKEGFETAISCPDSACPKRGHLQENEIECMVATEIMQRYRKLQFEKE 101
Query: 106 YVRGYERSYCPNRNCMALVVNECERKGRMKKAQCPNCKHWFCFRCKLKWHGGYHCEE--- 162
+ R++CP+ C A+ + + +C C FC CK WH C+E
Sbjct: 102 VLLDPSRTWCPSSTCQAVCQLKESDTVLPQLVRCSVCTLEFCSACKASWHPDQDCQENVP 161
Query: 163 -SGNLRDRNDIAFGQLAERMKWARCPGCGHCVQRKNGCHVM 202
+ L + F + RCP C ++R GC M
Sbjct: 162 ITSFLPGESSSFFKADDDDAPIKRCPKCKVYIERDEGCAQM 202
>sp|O76924|ARI2_DROME Protein ariadne-2 OS=Drosophila melanogaster GN=ari-2 PE=2 SV=1
Length = 509
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 14/184 (7%)
Query: 26 CEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECPGLNCQKNLDPFS 85
C +C +K + C H FC++C Y + + + +I C C +
Sbjct: 153 CPVCASSQLGDKFYSLA--CGHSFCKDCWTIYFETQIFQGISTQIGCMAQMCNVRVPEDL 210
Query: 86 CKPMIPSSLF-SKWCDLLCEDYVRGY-ERSYCPNRNCMALVVNECERKGRMKKAQCPNCK 143
++ + K+ +DYV+ + E +CP NC ++V E K+A C C
Sbjct: 211 VLTLVTRPVMRDKYQQFAFKDYVKSHPELRFCPGPNCQ-IIVQSSEISA--KRAICKACH 267
Query: 144 HWFCFRCKLKWHGGYHCEESGNL----RDRNDIAFGQLAERMKWARCPGCGHCVQRKNGC 199
FCFRC + +H C+ D ++ A ++ K CP C C+++ GC
Sbjct: 268 TGFCFRCGMDYHAPTDCQVIKKWLTKCADDSETA-NYISAHTK--DCPKCHICIEKNGGC 324
Query: 200 HVMQ 203
+ MQ
Sbjct: 325 NHMQ 328
>sp|Q6DH94|R1442_DANRE Probable E3 ubiquitin-protein ligase RNF144A-B OS=Danio rerio
GN=rnf144ab PE=2 SV=1
Length = 293
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 10/187 (5%)
Query: 24 FTCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECPGLNC--QKNL 81
+C++C+ ++ + C FC C+ +Y+++++++ I CP C Q +L
Sbjct: 18 LSCKLCLGEFPL-EQMTTISQCQCIFCSLCLKQYVELLIKEGLETAISCPDSACPKQGHL 76
Query: 82 DPFSCKPMIPSSLFSKWCDLLCE-DYVRGYERSYCPNRNCMALV-VNECERKGRMKKAQC 139
+ M+ + + L E + + R++CP+ +C A+ +NE E + + QC
Sbjct: 77 LENEIECMVAGEVMQHYKRLQFEREVLLDPCRTWCPSSSCQAVCQLNEAEVQ-LPQPVQC 135
Query: 140 PNCKHWFCFRCKLKWHGGYHCEE----SGNLRDRNDIAFGQLAERMKWARCPGCGHCVQR 195
P C FC C+ H G C+E + L N + RCP C ++R
Sbjct: 136 PECSLRFCSACRADCHTGQACQEMLPITTFLPGENGSNLKSQEDEAPIKRCPKCKVYIER 195
Query: 196 KNGCHVM 202
GC M
Sbjct: 196 DEGCAQM 202
>sp|Q9UBS8|RNF14_HUMAN E3 ubiquitin-protein ligase RNF14 OS=Homo sapiens GN=RNF14 PE=1
SV=1
Length = 474
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 36/213 (16%)
Query: 20 NGSSFTCEICI-EPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECPGLNCQ 78
N F C IC E + + + + C H +C+ C+ Y ++ ++D + CP C
Sbjct: 214 NSKLFLCSICFCEKLGSECMYFLE--CRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCP 271
Query: 79 KNLDPFSCKPMIPSSLFSKWCDLLCEDYVRGY-ERSYCPNRNCMALVVNECERKGRMKKA 137
P K ++ + LF+++ LL + + + YCP C V+ E
Sbjct: 272 SVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQE----PGCTMG 327
Query: 138 QCPNCKHWFCFRCKLKWHGGYHC----EESGNLRDRN-----------DIAFGQLA---- 178
C +C FC C+L +HG C E+ +LR+ D +G+
Sbjct: 328 ICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKA 387
Query: 179 ----ERMKWAR-----CPGCGHCVQRKNGCHVM 202
E +W CP CG +++ +GC+ M
Sbjct: 388 LEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKM 420
>sp|Q9BYM8|HOIL1_HUMAN RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Homo
sapiens GN=RBCK1 PE=1 SV=2
Length = 510
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 29/197 (14%)
Query: 20 NGSSFTCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECPGLN--- 76
N C +C +A + + C H FC+EC+ Q ++++ A++ CP ++
Sbjct: 276 NTEPAECPVCYSVLAPGEAVVLRE-CLHTFCRECL----QGTIRNSQEAEVSCPFIDNTY 330
Query: 77 -CQKNLDPFSCKPMIPSSLFSKWCDL---LCEDYVRGYERSYCPNRNCMALVVNECERKG 132
C L K ++ + ++ DL + E+ R +C +C C +
Sbjct: 331 SCSGKLLEREIKALLTPEDYQRFLDLGISIAEN--RSAFSYHCKTPDCKGW----CFFED 384
Query: 133 RMKKAQCPNCKHWFCFRCKLKWHGGYHC---EESGNLRDRNDIAFGQLAERMKWA----- 184
+ + CP C H C CK H +C +E LR +ND+A Q E +K
Sbjct: 385 DVNEFTCPVCFHVNCLLCK-AIHEQMNCKEYQEDLALRAQNDVAARQTTEMLKVMLQQGE 443
Query: 185 --RCPGCGHCVQRKNGC 199
RCP C VQ+K+GC
Sbjct: 444 AMRCPQCQIVVQKKDGC 460
>sp|P0C8K8|ARI6_ARATH Putative E3 ubiquitin-protein ligase ARI6 OS=Arabidopsis thaliana
GN=ARI6 PE=5 SV=1
Length = 552
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 71/200 (35%), Gaps = 35/200 (17%)
Query: 20 NGSSFTCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECPGLNCQK 79
+G FTC IC E + C HPFC C YI + D C L C
Sbjct: 127 DGREFTCGICFESYPLEETISVS--CGHPFCATCWTGYISTSINDGPG----CLMLKC-- 178
Query: 80 NLDPFSCKPMIPSSLFSKWCDLLC-----EDYVRGYERSYCP-NRNCMALVVNECERKGR 133
P+ C P+++ D LC E Y R + RSY NR CE
Sbjct: 179 ---PYPC---CPAAIGRDMIDNLCSKEDKERYYRYFLRSYVEVNREMKCCPAPGCEHAIS 232
Query: 134 MKKAQCPN------CKHWFCFRCKLKWHGGYHCEESGNLRDRNDIAFGQLAERMKWAR-- 185
N C H FC+ C + H C+ G +N +E M W
Sbjct: 233 FAAGTESNYDVSCLCSHSFCWNCSEEAHRPVDCDTVGKWILKNSTE----SENMNWILAN 288
Query: 186 ---CPGCGHCVQRKNGCHVM 202
CP C +++ +GC M
Sbjct: 289 SKPCPKCKRPIEKNHGCMHM 308
>sp|Q9WUB0|HOIL1_MOUSE RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Mus
musculus GN=Rbck1 PE=1 SV=2
Length = 508
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 83/200 (41%), Gaps = 35/200 (17%)
Query: 20 NGSSFTCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECPGLNCQK 79
N C +C +A + + C H FC+EC+ Q ++++ A++ CP ++
Sbjct: 274 NTEPTECPVCYSVLAPGEAVVLRE-CLHTFCRECL----QGTIRNSQEAEVACPFIDST- 327
Query: 80 NLDPFSCKPMIPSSLFSKWCDLLC--EDYVRGYER--SYCPNRNCMALVVNECERKG--- 132
+SC P L + L EDY R + S NR+ ++ + +G
Sbjct: 328 ----YSC----PGKLLEREIRALLSPEDYQRFLDLGVSIAENRSTLSYHCKTPDCRGWCF 379
Query: 133 ---RMKKAQCPNCKHWFCFRCKLKWHGGYHCEESGN---LRDRNDIAFGQLAERMKWA-- 184
+ + CP C C CK H +C E + LR +ND+A Q E +K
Sbjct: 380 FEDDVNEFTCPVCTRVNCLLCK-AIHEHMNCREYQDDLALRAQNDVAARQTTEMLKVMLQ 438
Query: 185 -----RCPGCGHCVQRKNGC 199
CP C VQ+K+GC
Sbjct: 439 QGEAMHCPQCRIVVQKKDGC 458
>sp|Q9FFN9|ARI13_ARATH Probable E3 ubiquitin-protein ligase ARI13 OS=Arabidopsis thaliana
GN=ARI13 PE=2 SV=1
Length = 536
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 69/161 (42%), Gaps = 13/161 (8%)
Query: 25 TCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQ--VMVQDNNTAKIECPGLNCQKNLD 82
+C IC + + C+H FC+ C KY++ + + +I CP CQ +
Sbjct: 86 SCGICFKTCDDGDYLISTPFCSHMFCKSCWRKYLEKNFYLVEKTQTRISCPHGACQAAVG 145
Query: 83 PFSCKPMIPSSLFSKWCDLLCEDYVRG---YERSYCPNRNCMALV-VNECERKGRMKKAQ 138
P + + + + + + Y+ G E YCP ++C ++ ++ G ++
Sbjct: 146 PDTIQKLTVCDQ-EMYVEYILRSYIEGNKVLEIKYCPAQDCNYVIEFHQKNHDGADQEDY 204
Query: 139 CPN----CKHWFCFRCKLKWHGGYHCEESGN--LRDRNDIA 173
N C H FC+RC L+ H C + + RD N ++
Sbjct: 205 GFNVVCLCGHIFCWRCMLESHKPVTCNNASDWLFRDLNSLS 245
>sp|Q54CX4|Y5521_DICDI Uncharacterized protein DDB_G0292642 OS=Dictyostelium discoideum
GN=DDB_G0292642 PE=4 SV=2
Length = 903
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 16/188 (8%)
Query: 26 CEIC-IEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECPGLNCQKNLDPF 84
C+IC +E +N+ F + C H +C +CI +++++++ + I CP C+K +
Sbjct: 616 CKICYMEYDQSNEVFTLE--CDHVYCFDCITEHLRILITEGRVLDISCPHPQCKKEIKES 673
Query: 85 SCKPMIPSSLFSKWCDLLCEDYVRGYERSYCPNRNCMALVVNECERKGRMKKAQCPNCKH 144
+ + K+ ++ +CP +C V ER + CP C +
Sbjct: 674 EIYMLTNEKNWLKYQKFSMIASLKTEPIKWCPTPDCDTPVRGGSERNPIL---NCPKCSN 730
Query: 145 WFCFRCKLKWHGGYHC-EESGNLRDRND-------IAFGQLAERMK--WARCPGCGHCVQ 194
FC+ C H G C E+ L+ R + A+ E K CP C ++
Sbjct: 731 DFCWICGEYSHEGAKCGTEAMELQGRKNKSIESAATAYIDFLESNKHFVKPCPTCKSHIE 790
Query: 195 RKNGCHVM 202
+ +GC+ M
Sbjct: 791 KHDGCNHM 798
>sp|Q9US46|ITT1_SCHPO E3 ubiquitin-protein ligase itt1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=itt1 PE=4 SV=1
Length = 435
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 83/218 (38%), Gaps = 50/218 (22%)
Query: 24 FTCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECPGLNCQKNLDP 83
F C +C + F+ C H CQ C+ Y + +Q+ ++I+C L+C K+
Sbjct: 172 FQCNVCFDEFNGTDCFQLTR-CGHVSCQSCLRDYYTMCIQEGMFSQIKCIDLDCGKDAPV 230
Query: 84 FSCKPM---IPSSLFSKWCDLLCEDYVRGYERS----YCPNRNCMALVVNECERKGRMKK 136
+ K + + L +++ +L + R YE +CP C +R K
Sbjct: 231 LTLKELESIVGVQLTNRYKEL---EEKRRYENDSNIIFCPRSFCQG----PSKRDPGQKL 283
Query: 137 AQCPNCKHWFCFRCKLKWHGGYH-CEESGNLRDRNDI----------------------A 173
A C C FC C+ WHG C+ G+ + ++
Sbjct: 284 AICQKCDFAFCSFCQATWHGDLSPCKLEGDSKKLVEMYLNYQENEPEKALELEKRYGKRI 343
Query: 174 FGQLAERM-------KWA-----RCPGCGHCVQRKNGC 199
+L E++ KW RCP C V+R +GC
Sbjct: 344 IDRLVEQVKNDEEAEKWVLLNGQRCPTCDRVVERIDGC 381
>sp|Q04638|ITT1_YEAST Translation termination inhibitor protein ITT1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ITT1 PE=1
SV=1
Length = 464
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 87/248 (35%), Gaps = 70/248 (28%)
Query: 22 SSFTCEICIEPMAANKKFK----NKNLCTHPFCQECIAKYIQVMVQDNNTAKIECP---- 73
S++ C IC+E + K N N+ H C+ C Y M+Q+N + + CP
Sbjct: 176 SNYHCCICMEMEKGVRMIKLPCENANV-EHYLCRGCAKSYFTAMIQENRISSVRCPQCEY 234
Query: 74 ------GLNCQKNLDPFSCKPMIPSSLFSKWCDL-LCEDYVRGYE-------RSYCPN-- 117
K + P+IP S + D LCE Y + + YCP
Sbjct: 235 KELKLEDFKSYKKMLKALFTPLIPVSFLKEVIDTELCERYEKMFYNQAATRLSKYCPYAC 294
Query: 118 ---RNCMALVVNECERKGRMKKAQCPNCKHWFCFRCKLKWHG-----GYHCEESGNL--- 166
R C + E + QC C FCF C WHG G S ++
Sbjct: 295 VTCRRCDSWCTKEDLDDAMI---QCQKCHFVFCFDCLHAWHGYNNKCGKKVSLSTDIIEE 351
Query: 167 -----------RDRNDIAFGQ----------LAERM----------KWARCPGCGHCVQR 195
+ + + +G+ LAE+M RCP C V+R
Sbjct: 352 YLDDTVTSYERKRKLEAKYGRRVLELEVNDYLAEKMLDLAIKKEGSNLQRCPKCKVVVER 411
Query: 196 KNGCHVMQ 203
GC+ M+
Sbjct: 412 SEGCNKMK 419
>sp|D3YYI7|RN217_MOUSE Probable E3 ubiquitin-protein ligase RNF217 OS=Mus musculus
GN=Rnf217 PE=3 SV=2
Length = 515
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 78/198 (39%), Gaps = 38/198 (19%)
Query: 24 FTCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECPGLNCQKNLDP 83
C +C+E +K K C C+EC+ Y+ VQ +I+CP C + L+
Sbjct: 234 LMCRVCLE----DKPIKPLPCCKKAVCEECLKIYLSSQVQLGQV-EIKCPVTECFEFLEE 288
Query: 84 FSCKPMIPSSLFSKWCDLL--------------CEDYVRGYERSYCPNRNCMALVVNECE 129
+ + K+ L C+ + ++ + P +
Sbjct: 289 TTVVYNLTHEDSIKYKYFLELGRIDSSTKPCPQCKHFTTFKKKGHIPTPS---------- 338
Query: 130 RKGRMKKAQCPNCKHWFCFRCKLKWHGGYHCEE--SGNLRDR---NDIAFGQLAERMKWA 184
R K QCP C+ +CF+C WH G +C+E G+ R ++I GQ +
Sbjct: 339 RSESRYKIQCPTCQLIWCFKCHSPWHEGVNCKEYKKGDKLLRHWASEIEHGQRNAQ---- 394
Query: 185 RCPGCGHCVQRKNGCHVM 202
+CP C +QR GC M
Sbjct: 395 KCPKCKIHIQRTEGCDHM 412
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 81/206 (39%), Gaps = 11/206 (5%)
Query: 1 MGNSLQRPTENRGRQEEEGNGSSFTCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQV 60
M N L R G + +E C IC+ + + C+H FC+ C+ + +
Sbjct: 1539 MVNELAREKSALGEKPDE---IELECPICLSEVDDGYSLEG---CSHLFCKACLLEQFEA 1592
Query: 61 MVQDNNTAKIECPGLNCQKNLDPFSCKPMIPSSLFSKWCDLLCEDYVRGYE--RSYCPNR 118
+++ + I C ++C + + ++ + +V + +C
Sbjct: 1593 SMRNFDAFPILCSHIDCGAPIVVADMRALLSQEKLDELISASLSAFVTSSDGKLRFCSTP 1652
Query: 119 NCMALV-VNECERKGRMKKAQCPNCKHWFCFRCKLKWHGGYHCEESGNLRDRNDIAFGQL 177
+C ++ V + G + C C C RC L++H CE ++ D++
Sbjct: 1653 DCPSIYRVAGPQESG--EPFICGACHSETCTRCHLEYHPLITCERYKKFKENPDLSLKDW 1710
Query: 178 AERMKWARCPGCGHCVQRKNGCHVMQ 203
A+ CP C +++ +GC+ +Q
Sbjct: 1711 AKGKDVKECPICKSTIEKTDGCNHLQ 1736
>sp|Q6T486|RBRA_DICDI Probable E3 ubiquitin-protein ligase rbrA OS=Dictyostelium
discoideum GN=rbrA PE=3 SV=1
Length = 520
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 16/194 (8%)
Query: 16 EEEGNGSSFTCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNT-AKIECPG 74
E+ GN S C IC+E + F +C H +C C Y+++ V + CP
Sbjct: 132 EKSGNVS---CLICLEDYPPTQTFAL--ICNHRYCLPCYKNYLEIKVSEGPECIYTPCPA 186
Query: 75 LNCQKNLDPFSCKPMIPSSLFSKWCDLLCEDYVRGY-ERSYCPNRNCMALVVNECERKGR 133
C+ + + K ++ +F ++ + + + YV + +CP C+ + C+RK R
Sbjct: 187 PKCKVIVHQDAFKQIVSPEVFERFNNFILKSYVDDNPQVKWCPAPGCIYSI--RCDRKER 244
Query: 134 MKKAQCPNCKHWFCFRCKLKWHGGYHCEESGNLRDRNDIAFGQLAERMKW-----ARCPG 188
+ C C +CF C + G H + D+ +E + W +CP
Sbjct: 245 KEAVNC-KCGFQYCFNCN-DYEIGDHMPCPCSQVDKWLQKASDESENVTWMLANTKKCPE 302
Query: 189 CGHCVQRKNGCHVM 202
C +++ GC M
Sbjct: 303 CRSPIEKNGGCMHM 316
>sp|Q8L829|ARI5_ARATH Probable E3 ubiquitin-protein ligase ARI5 OS=Arabidopsis thaliana
GN=ARI5 PE=2 SV=1
Length = 552
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 70/199 (35%), Gaps = 34/199 (17%)
Query: 20 NGSSFTCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECPGLNCQK 79
+G FTC IC + + C HPFC C YI + D PG K
Sbjct: 126 DGREFTCGICFDSYTLEEIVSVS--CGHPFCATCWTGYISTTINDG-------PGCLMLK 176
Query: 80 NLDPFSCKPMIPSSLFSKWCDLLC-EDYVRGYERSY---------CPNRNCMALVVNECE 129
DP SC I + K E Y R + RSY CP C + +
Sbjct: 177 CPDP-SCPAAIGRDMIDKLASKEDKEKYYRYFLRSYVEVNREMKWCPAPGCEHAI----D 231
Query: 130 RKGRMKKAQCP-NCKHWFCFRCKLKWHGGYHCEESGNLRDRNDIAFGQLAERMKWAR--- 185
G + C H FC+ C + H C+ G +N +E M W
Sbjct: 232 FAGGTESYDVSCLCSHSFCWNCTEEAHRPVDCDTVGKWILKNSAE----SENMNWILANS 287
Query: 186 --CPGCGHCVQRKNGCHVM 202
CP C +++ +GC M
Sbjct: 288 KPCPKCKRPIEKNHGCMHM 306
>sp|Q62921|HOIL1_RAT RanBP-type and C3HC4-type zinc finger-containing protein 1
OS=Rattus norvegicus GN=Rbck1 PE=1 SV=3
Length = 508
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 83/200 (41%), Gaps = 35/200 (17%)
Query: 20 NGSSFTCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECPGLNCQK 79
N C +C +A + + C H FC+EC+ Q ++++ A++ CP ++
Sbjct: 274 NTEPAECPVCYSVLAPGEAVVLRE-CLHTFCRECL----QGTIRNSQEAEVSCPFID--- 325
Query: 80 NLDPFSCKPMIPSSLFSKWCDLLC--EDYVRGYER--SYCPNRNCMALVVNECERKG--- 132
+ +SC P L + L EDY R + S NR+ ++ + +G
Sbjct: 326 --NTYSC----PGKLLEREIRALLSPEDYQRFLDLGVSIAENRSTLSYHCKTPDCRGWCF 379
Query: 133 ---RMKKAQCPNCKHWFCFRCKLKWHGGYHCEESGN---LRDRNDIAFGQLAERMKWA-- 184
+ + CP C C CK H +C E + R RND+A Q E ++
Sbjct: 380 FEDDVNEFTCPVCTRVNCLLCK-AIHERMNCREYQDDLAHRARNDVAAQQTTEMLRVMLQ 438
Query: 185 -----RCPGCGHCVQRKNGC 199
CP C VQ+K+GC
Sbjct: 439 QGEAMYCPQCRIVVQKKDGC 458
>sp|Q8IWT3|CUL9_HUMAN Cullin-9 OS=Homo sapiens GN=CUL9 PE=1 SV=2
Length = 2517
Score = 44.3 bits (103), Expect = 6e-04, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 67/185 (36%), Gaps = 16/185 (8%)
Query: 26 CEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECPGLNCQKNLDPFS 85
C +C+ P+ + + C H C+ C +Y+ ++ N CP +C
Sbjct: 2070 CPVCVSPLGCDDDLPSL-CCMHYCCKSCWNEYLTTRIEQNLVLNCTCPIADCPAQPTGAF 2128
Query: 86 CKPMIPS-SLFSKWCDLLCEDYVRGYER-SYCPN-RNCMALVVNECERKGRMKKAQCPNC 142
+ ++ S + SK+ L YV ++C N + C ++ R+G C C
Sbjct: 2129 IRAIVSSPEVISKYEKALLRGYVESCSNLTWCTNPQGCDRILC----RQGLGCGTTCSKC 2184
Query: 143 KHWFCFRCKL-KWHGGYHCEESGNLRDRNDIAFGQLAE-------RMKWARCPGCGHCVQ 194
CF C + H C D G E ++ RCP C ++
Sbjct: 2185 GWASCFNCSFPEAHYPASCGHMSQWVDDGGYYDGMSVEAQSKHLAKLISKRCPSCQAPIE 2244
Query: 195 RKNGC 199
+ GC
Sbjct: 2245 KNEGC 2249
>sp|Q84RQ8|ARI15_ARATH Probable E3 ubiquitin-protein ligase ARI15 OS=Arabidopsis thaliana
GN=ARI15 PE=2 SV=1
Length = 452
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 63/146 (43%), Gaps = 7/146 (4%)
Query: 31 EPMAANKKFKNKNLCTHPFCQECIAKYIQ---VMVQDNNTAKIECPGLNCQKNLDPFSCK 87
+ + + + C+H FC+ C +KY++ V+ N+TA I CP +C+ + P + +
Sbjct: 40 DAVVVDGDLISTPFCSHKFCKACWSKYLKKNFFSVEKNHTA-ISCPDRDCRAAVGPETVE 98
Query: 88 PMI--PSSLFSKWCDLLCEDYVRGYERSYCPNRNCMALVVNECERKGRMKKAQCP-NCKH 144
+ +++ + + G++ CP R C ++ + C H
Sbjct: 99 KLTVRDQAMYELYILKSYREKYLGWKLKLCPARGCNYVIEFHLASEDEEHSLNIVCLCGH 158
Query: 145 WFCFRCKLKWHGGYHCEESGNLRDRN 170
FC+RC L+ H C + + R+
Sbjct: 159 IFCWRCMLESHRPVTCNNASDWLSRD 184
>sp|P32849|RAD5_YEAST DNA repair protein RAD5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RAD5 PE=1 SV=1
Length = 1169
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 22/98 (22%)
Query: 23 SFTCEICI-EPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECPGLNCQKNL 81
S C IC EPM +K + C H FC++C+ +YI+ Q++ ++CP NC+ +
Sbjct: 911 SLECSICTTEPMDLDKALFTE--CGHSFCEKCLFEYIE--FQNSKNLGLKCP--NCRNQI 964
Query: 82 DP---------------FSCKPMIPSSLFSKWCDLLCE 104
D KP P+S SK LL E
Sbjct: 965 DACRLLALVQTNSNSKNLEFKPYSPASKSSKITALLKE 1002
>sp|A2A7Q9|RN19B_MOUSE E3 ubiquitin-protein ligase RNF19B OS=Mus musculus GN=Rnf19b PE=1
SV=2
Length = 732
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 23/134 (17%)
Query: 45 CTHPFCQECIAKYIQVMVQDNNTAKIECPGLNCQKNLDPFSCKPMIPSS-LFSKWCDLLC 103
C H C++C+ Y+++ + ++ I CP C + L+P + ++ L K+ + +
Sbjct: 134 CPHRSCRDCLRHYLRLEISESRVP-ISCP--ECSERLNPHDIRLLLADPPLMHKYEEFML 190
Query: 104 EDYVRG-YERSYCPNRNCMALVVN---------ECERKGRMKKAQCPNCKHWFCFRCKLK 153
Y+ + +CP +C V+ CER+G C+ FC+ CK
Sbjct: 191 RRYLASDPDCRWCPAPDCGYAVIAYGCASCPKLTCEREG---------CQTEFCYHCKQI 241
Query: 154 WHGGYHCEESGNLR 167
WH C+ + R
Sbjct: 242 WHPNQTCDMARQQR 255
>sp|Q9LVW9|ARI4_ARATH Putative E3 ubiquitin-protein ligase ARI4 OS=Arabidopsis thaliana
GN=ARI4 PE=5 SV=2
Length = 529
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 14/186 (7%)
Query: 23 SFTCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECPGLNCQKNLD 82
+ C+IC+E +K + C H FC +C ++ V + + +I C C D
Sbjct: 116 TMKCDICMEE-DLSKYAMTRMECGHRFCNDCWKEHFTVRINEGEGKRIRCMAYKCNTICD 174
Query: 83 PFSCKPMIPSSLFSKWCDLLCEDYVRGYER-SYCPNRNCMALVVNECERKGRMKKAQCPN 141
+ ++ + L K+ L E YV +CP+ + + G + + +C +
Sbjct: 175 --EARQLVSTELAEKFDRFLIESYVEDNNMVKWCPSTPHCGNAIRNIKDDGDVDEVEC-S 231
Query: 142 CKHWFCFRCKLKWHGGYHCEESGNLRDRNDIAFGQLAERMKWAR-----CPGCGHCVQRK 196
C FCF C + H C + + + +E + W CP C +Q++
Sbjct: 232 CGLQFCFSCLSESHSPCSCLMWKLWKKKCE----DESETVNWMTVNTKLCPKCSKPIQKR 287
Query: 197 NGCHVM 202
+GC+ M
Sbjct: 288 DGCNHM 293
>sp|P58283|RN216_MOUSE E3 ubiquitin-protein ligase RNF216 OS=Mus musculus GN=Rnf216 PE=1
SV=3
Length = 853
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 46 THPFCQECIAKYIQVMVQDNNTAKIECPGLNCQKNLDPFSCKPMIPSSLFSKWCDLLCED 105
H FC+EC+ +Y Q V + +++ C +C + + ++P ++ K+ + E+
Sbjct: 521 AHLFCKECLIRYAQEAVFGSGKSELSCMEGSCTCSFPTSELEKVLPQTILYKYYERKAEE 580
Query: 106 YVRGYERSY---CPNRNCMALVVNECERKGRMKKAQCPN--CKHWFCFRCKLKW--HGGY 158
V CP+ + AL+ ++ +K+ CPN C+ C +C+ W H G
Sbjct: 581 EVAAAYADELVRCPSCSFPALLDSD------VKRFSCPNPRCRKETCRKCQGLWKEHNGL 634
Query: 159 HCEESGNLRDRNDIAF-GQLAERMKWAR---CPGCGHCVQRKNGCHVM 202
CEE L +++DI + + E+M AR C CG + + GC+ M
Sbjct: 635 TCEE---LAEKDDIKYRTSIEEKMTAARIRKCHKCGTGLIKSEGCNRM 679
>sp|Q9SKC3|ARI9_ARATH Probable E3 ubiquitin-protein ligase ARI9 OS=Arabidopsis thaliana
GN=ARI9 PE=2 SV=1
Length = 543
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 78/199 (39%), Gaps = 15/199 (7%)
Query: 11 NRGRQEEEGNGSSFTCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDN-NTAK 69
N G ++++ + C IC E + + C HP+C+ C A YI ++D +
Sbjct: 113 NGGEKDKKCRKVNIQCGICFESYTREEIARVS--CGHPYCKTCWAGYITTKIEDGPGCLR 170
Query: 70 IECPGLNCQKNLDPFSCKPMIPSSLFSKWCDLLCEDYVR-GYERSYCPNRNCMALVVNEC 128
++CP +C + + + + + K+ + YV G + +CP+ C V
Sbjct: 171 VKCPEPSCSAAVGKDMIEDVTETKVNEKYSRYILRSYVEDGKKIKWCPSPGC-GYAVEFG 229
Query: 129 ERKGRMKKAQCPNCKHWFCFRCKLKWHGGYHCEESGNLRDRNDIAFGQLAERMKWAR--- 185
+ C C + FC+ C H C+ +N +E W
Sbjct: 230 GSESSSYDVSCL-CSYRFCWNCSEDAHSPVDCDTVSKWIFKNQ----DESENKNWMLANS 284
Query: 186 --CPGCGHCVQRKNGCHVM 202
CP C +++ +GC+ M
Sbjct: 285 KPCPECKRPIEKNDGCNHM 303
>sp|Q6ZMZ0|RN19B_HUMAN E3 ubiquitin-protein ligase RNF19B OS=Homo sapiens GN=RNF19B PE=1
SV=2
Length = 732
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 23/134 (17%)
Query: 45 CTHPFCQECIAKYIQVMVQDNNTAKIECPGLNCQKNLDPFSCKPMIPSS-LFSKWCDLLC 103
C H C++C+ Y+++ + ++ I CP C + L+P + ++ L K+ + +
Sbjct: 137 CPHRSCRDCLRHYLRLEISESRVP-ISCP--ECSERLNPHDIRLLLADPPLMHKYEEFML 193
Query: 104 EDYVRG-YERSYCPNRNCMALVVN---------ECERKGRMKKAQCPNCKHWFCFRCKLK 153
Y+ + +CP +C V+ CER+G C+ FC+ CK
Sbjct: 194 RRYLASDPDCRWCPAPDCGYAVIAYGCASCPKLTCEREG---------CQTEFCYHCKQI 244
Query: 154 WHGGYHCEESGNLR 167
WH C+ + R
Sbjct: 245 WHPNQTCDMARQQR 258
>sp|E6ZIJ1|HOIL1_DICLA RanBP-type and C3HC4-type zinc finger-containing protein 1
OS=Dicentrarchus labrax GN=rbck1 PE=3 SV=1
Length = 707
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 77/195 (39%), Gaps = 25/195 (12%)
Query: 20 NGSSFTCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECP----GL 75
N C IC + + + C H FC+EC+ I + + ++ CP
Sbjct: 473 NPEPVDCRICYMDLQPGEGVLLRE-CLHCFCRECLRSVIML----SEEPEVSCPYRDDTY 527
Query: 76 NCQKNLDPFSCKPMIPSSLFSKWCDLLCEDYVRGYERSY-CPNRNCMALVVNECERKGRM 134
+C +L + ++P+ + +W E SY C +C+ V E +
Sbjct: 528 SCACSLQEREIRALVPAEEYERWLQRGLSVAESRCEGSYHCATPDCLGWCVYE----DTV 583
Query: 135 KKAQCPNCKHWFCFRCKLKWHGGYHCEESGN---LRDRNDIAFGQLAERMKW-------A 184
CP C+ C CK H G +C++ + R ND A + + +K
Sbjct: 584 NVFHCPVCRKHNCLICK-SIHEGMNCKQYQDDLAARAINDSAARRTTQLLKTLVQSGEAM 642
Query: 185 RCPGCGHCVQRKNGC 199
CP CG VQ+++GC
Sbjct: 643 HCPQCGIIVQKRDGC 657
>sp|Q8W468|ARI8_ARATH Probable E3 ubiquitin-protein ligase ARI8 OS=Arabidopsis thaliana
GN=ARI8 PE=2 SV=1
Length = 567
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 66/185 (35%), Gaps = 20/185 (10%)
Query: 24 FTCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDN-NTAKIECPGLNCQKNLD 82
C IC E ++K + C HPFC C YI + D + CP +C+ +
Sbjct: 126 LDCGICFETFLSDKL--HAAACGHPFCDSCWEGYITTAINDGPGCLTLRCPDPSCRAAVG 183
Query: 83 PFSCKPMIPSSLFSKWCDLLCEDYVRGYERS-YCPNRNCMALVVNECERKGRMKKAQCPN 141
+ P K+ YV ++ +CP C VN G N
Sbjct: 184 QDMINLLAPDKDKQKYTSYFVRSYVEDNRKTKWCPAPGC-DYAVNFVVGSGNYD----VN 238
Query: 142 CK--HWFCFRCKLKWHGGYHCEESGNLRDRNDIAFGQLAERMKWAR-----CPGCGHCVQ 194
C+ + FC+ C + H C+ +N +E M W CP C ++
Sbjct: 239 CRCCYSFCWNCAEEAHRPVDCDTVSKWVLKNSAE----SENMNWILANSKPCPKCKRPIE 294
Query: 195 RKNGC 199
+ GC
Sbjct: 295 KNQGC 299
>sp|Q6CJM4|RAD5_KLULA DNA repair protein RAD5 OS=Kluyveromyces lactis (strain ATCC 8585 /
CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=RAD5 PE=3 SV=1
Length = 1114
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 10/55 (18%)
Query: 23 SFTCEIC----IEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECP 73
SF C IC IEP++A + C H FC+ C+A+YI+ Q N I CP
Sbjct: 855 SFECAICTTECIEPLSAVSITE----CLHTFCEPCLAEYIE--FQQNKKLSINCP 903
>sp|Q9NWF9|RN216_HUMAN E3 ubiquitin-protein ligase RNF216 OS=Homo sapiens GN=RNF216 PE=1
SV=3
Length = 866
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 46 THPFCQECIAKYIQVMVQDNNTAKIECPGLNCQKNLDPFSCKPMIPSSLFSKWCDLLCED 105
H FC+EC+ +Y Q V + ++ C +C + + ++P ++ K+ + E+
Sbjct: 533 AHLFCKECLIRYAQEAVFGSGKLELSCMEGSCTCSFPTSELEKVLPQTILYKYYERKAEE 592
Query: 106 YVRGYERSY---CPNRNCMALVVNECERKGRMKKAQCPN--CKHWFCFRCKLKW--HGGY 158
V CP+ + AL+ ++ +K+ CPN C+ C +C+ W H G
Sbjct: 593 EVAAAYADELVRCPSCSFPALLDSD------VKRFSCPNPHCRKETCRKCQGLWKEHNGL 646
Query: 159 HCEESGNLRDRNDIAF-GQLAERMKWAR---CPGCGHCVQRKNGCHVM 202
CEE L +++DI + + E+M AR C CG + + GC+ M
Sbjct: 647 TCEE---LAEKDDIKYRTSIEEKMTAARIRKCHKCGTGLIKSEGCNRM 691
>sp|Q9LVX0|ARI3_ARATH Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana
GN=ARI3 PE=2 SV=1
Length = 537
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 78/187 (41%), Gaps = 14/187 (7%)
Query: 23 SFTCEICIEP-MAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECPGLNCQKNL 81
+ C++C+E + +N + C H FC +C + V + + + +I C C+
Sbjct: 118 TMKCDVCMEDDLPSN--VMTRMECGHRFCNDCWIGHFTVKINEGESKRILCMAHECKAIC 175
Query: 82 DPFSCKPMIPSSLFSKWCDLLCEDYVRGYER-SYCPNRNCMALVVNECERKGRMKKAQCP 140
D + ++ L ++ L E YV +CP++ + + E + + C
Sbjct: 176 DEDVVRKLVSPELADRYDRFLIESYVEDNNMVKWCPSKPHCGSAIRKIEDGHDVVEVGC- 234
Query: 141 NCKHWFCFRCKLKWHGGYHCEESGNLRDRNDIAFGQLAERMKWAR-----CPGCGHCVQR 195
+C FCF C + H C + + + +E + W CP C +Q+
Sbjct: 235 SCGLQFCFSCLSESHSPCSCLMWKLWKKKCE----DESETVNWITVNTKLCPKCSKPIQK 290
Query: 196 KNGCHVM 202
++GC++M
Sbjct: 291 RDGCNLM 297
>sp|Q6NW85|ARI1L_DANRE E3 ubiquitin-protein ligase arih1l OS=Danio rerio GN=arih1l PE=2
SV=1
Length = 533
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 67/169 (39%), Gaps = 22/169 (13%)
Query: 45 CTHPFCQECIAKYIQV-MVQDNNTAKIECPGLNCQKNLDPFSCKPMIPSSLFS-KWCDLL 102
C H FC +C Y+ ++++ I CP NC +D + +I S K+ L+
Sbjct: 179 CGHKFCMQCWGDYLTTKIIEEGMGQTISCPAHNCDILVDDNTVMRLITDSKVKLKYQHLI 238
Query: 103 CEDYVR-GYERSYCPNRNCMALVVNECERKGRMKKAQCPNCK--HWFCFRCKLKWHGGYH 159
+V +CP +C +V K + A+ CK FCF C WH
Sbjct: 239 TNSFVECNRLLKWCPAPDCHHVV------KVQYPDAKPVRCKCGRQFCFNCGENWHDPVK 292
Query: 160 CEESGNLR------DRNDIAFGQLAERMKWARCPGCGHCVQRKNGCHVM 202
C+ LR D + +A K CP C +++ GC+ M
Sbjct: 293 CKW---LRKWIKKCDDDSETSNWIAANTK--ECPKCHVTIEKDGGCNHM 336
>sp|Q8TC41|RN217_HUMAN Probable E3 ubiquitin-protein ligase RNF217 OS=Homo sapiens
GN=RNF217 PE=2 SV=3
Length = 275
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 136 KAQCPNCKHWFCFRCKLKWHGGYHCEE--SGNLRDR---NDIAFGQLAERMKWARCPGCG 190
K QCP C+ +CF+C WH G +C+E G+ R ++I GQ + +CP C
Sbjct: 80 KIQCPTCQFVWCFKCHSPWHEGVNCKEYKKGDKLLRHWASEIEHGQRNAQ----KCPKCK 135
Query: 191 HCVQRKNGCHVM 202
+QR GC M
Sbjct: 136 IHIQRTEGCDHM 147
>sp|Q9SKC2|ARI11_ARATH Probable E3 ubiquitin-protein ligase ARI11 OS=Arabidopsis thaliana
GN=ARI11 PE=2 SV=1
Length = 542
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 69/191 (36%), Gaps = 15/191 (7%)
Query: 19 GNGSSFTCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDN-NTAKIECPGLNC 77
G C IC E + +K + C HP+C+ C YI ++D +++CP +C
Sbjct: 132 GTEVDIQCGICFE--SYTRKEIARVSCGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSC 189
Query: 78 QKNLDPFSCKPMIPSSLFSKWCDLLCEDYVR-GYERSYCPNRNCMALVVNECERKGRMKK 136
+ + K+ YV G + +CP+ C V E G
Sbjct: 190 YAVVGQDMIDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCEYAV--EFGVNGSSSY 247
Query: 137 AQCPNCKHWFCFRCKLKWHGGYHCEESGNLRDRNDIAFGQLAERMKWAR-----CPGCGH 191
C + FC+ C H CE +N +E M W CP C
Sbjct: 248 DVSCLCSYKFCWNCCEDAHSPVDCETVSKWLLKN----KDESENMNWILAKTKPCPKCKR 303
Query: 192 CVQRKNGCHVM 202
+++ GC+ M
Sbjct: 304 PIEKNTGCNHM 314
>sp|Q32NS4|ARI1_XENLA E3 ubiquitin-protein ligase arih1 OS=Xenopus laevis GN=arih1 PE=2
SV=1
Length = 529
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 22/169 (13%)
Query: 45 CTHPFCQECIAKYIQV-MVQDNNTAKIECPGLNCQKNLDPFSCKPMIPSSLFS-KWCDLL 102
C H FC +C +Y+ ++++ I CP C +D + +I S K+ L+
Sbjct: 175 CGHKFCMQCWGEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLI 234
Query: 103 CEDYVR-GYERSYCPNRNCMALVVNECERKGRMKKAQCPNCK--HWFCFRCKLKWHGGYH 159
+V +CP +C +V K + A+ +CK FCF C WH
Sbjct: 235 TNSFVECNRLLKWCPAPDCHHVV------KVQYPDAKPVHCKCGRQFCFNCGENWHDPVK 288
Query: 160 CEESGNLR------DRNDIAFGQLAERMKWARCPGCGHCVQRKNGCHVM 202
C+ LR D + +A K CP C +++ GC+ M
Sbjct: 289 CKW---LRKWIKKCDDDSETSNWIAANTK--ECPKCHVTIEKDGGCNHM 332
>sp|B1H1E4|ARI1_XENTR E3 ubiquitin-protein ligase arih1 OS=Xenopus tropicalis GN=arih1
PE=2 SV=1
Length = 529
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 65/171 (38%), Gaps = 26/171 (15%)
Query: 45 CTHPFCQECIAKYIQV-MVQDNNTAKIECPGLNCQKNLDPFSCKPMIPSSLFS-KWCDLL 102
C H FC +C ++Y+ ++++ I CP C +D + +I S K+ L+
Sbjct: 175 CGHKFCMQCWSEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLI 234
Query: 103 CEDYVR-GYERSYCPNRNCMALVVNECERKGRMKKAQCPN-------CKHWFCFRCKLKW 154
+V +CP +C +V K Q P+ C FCF C W
Sbjct: 235 TNSFVECNRLLKWCPAPDCHHVV-----------KVQYPDAKPVRCKCGRQFCFNCGENW 283
Query: 155 HGGYHCEESGNLR---DRNDIAFGQLAERMKWARCPGCGHCVQRKNGCHVM 202
H C+ D + +A K CP C +++ GC+ M
Sbjct: 284 HDPVKCKWLKKWIKKCDDDSETSNWIAANTK--ECPKCHVTIEKDGGCNHM 332
>sp|Q9Z1K5|ARI1_MOUSE E3 ubiquitin-protein ligase ARIH1 OS=Mus musculus GN=Arih1 PE=2
SV=3
Length = 555
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 26/171 (15%)
Query: 45 CTHPFCQECIAKYIQVMVQDNNTAK-IECPGLNCQKNLDPFSCKPMIPSSLFS-KWCDLL 102
C H FC +C ++Y+ + + + I CP C +D + +I S K+ L+
Sbjct: 201 CGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLI 260
Query: 103 CEDYVR-GYERSYCPNRNCMALVVNECERKGRMKKAQCPN-------CKHWFCFRCKLKW 154
+V +CP +C +V K Q P+ C FCF C W
Sbjct: 261 TNSFVECNRLLKWCPAPDCHHVV-----------KVQYPDAKPVRCKCGRQFCFNCGENW 309
Query: 155 HGGYHCEESGNLR---DRNDIAFGQLAERMKWARCPGCGHCVQRKNGCHVM 202
H C+ D + +A K CP C +++ GC+ M
Sbjct: 310 HDPVKCKWLKKWIKKCDDDSETSNWIAANTK--ECPKCHVTIEKDGGCNHM 358
>sp|A2VEA3|ARI1_BOVIN E3 ubiquitin-protein ligase ARIH1 OS=Bos taurus GN=ARIH1 PE=2 SV=1
Length = 555
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 26/171 (15%)
Query: 45 CTHPFCQECIAKYIQVMVQDNNTAK-IECPGLNCQKNLDPFSCKPMIPSSLFS-KWCDLL 102
C H FC +C ++Y+ + + + I CP C +D + +I S K+ L+
Sbjct: 201 CGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLI 260
Query: 103 CEDYVR-GYERSYCPNRNCMALVVNECERKGRMKKAQCPN-------CKHWFCFRCKLKW 154
+V +CP +C +V K Q P+ C FCF C W
Sbjct: 261 TNSFVECNRLLKWCPAPDCHHVV-----------KVQYPDAKPVRCKCGRQFCFNCGENW 309
Query: 155 HGGYHCEESGNLR---DRNDIAFGQLAERMKWARCPGCGHCVQRKNGCHVM 202
H C+ D + +A K CP C +++ GC+ M
Sbjct: 310 HDPVKCKWLKKWIKKCDDDSETSNWIAANTK--ECPKCHVTIEKDGGCNHM 358
>sp|Q9Y4X5|ARI1_HUMAN E3 ubiquitin-protein ligase ARIH1 OS=Homo sapiens GN=ARIH1 PE=1
SV=2
Length = 557
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 26/171 (15%)
Query: 45 CTHPFCQECIAKYIQVMVQDNNTAK-IECPGLNCQKNLDPFSCKPMIPSSLFS-KWCDLL 102
C H FC +C ++Y+ + + + I CP C +D + +I S K+ L+
Sbjct: 203 CGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLI 262
Query: 103 CEDYVR-GYERSYCPNRNCMALVVNECERKGRMKKAQCPN-------CKHWFCFRCKLKW 154
+V +CP +C +V K Q P+ C FCF C W
Sbjct: 263 TNSFVECNRLLKWCPAPDCHHVV-----------KVQYPDAKPVRCKCGRQFCFNCGENW 311
Query: 155 HGGYHCEESGNLR---DRNDIAFGQLAERMKWARCPGCGHCVQRKNGCHVM 202
H C+ D + +A K CP C +++ GC+ M
Sbjct: 312 HDPVKCKWLKKWIKKCDDDSETSNWIAANTK--ECPKCHVTIEKDGGCNHM 360
>sp|Q6PFJ9|ARI1_DANRE E3 ubiquitin-protein ligase arih1 OS=Danio rerio GN=arih1 PE=2 SV=1
Length = 527
Score = 39.3 bits (90), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 66/174 (37%), Gaps = 32/174 (18%)
Query: 45 CTHPFCQECIAKYIQV-MVQDNNTAKIECPGLNCQKNLDPFSCKPMIPSSLFS-KWCDLL 102
C H FC +C Y+ ++++ I CP +C +D + +I S K+ L+
Sbjct: 173 CGHKFCMQCWGDYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITDSKVKLKYQHLI 232
Query: 103 CEDYVR-GYERSYCPNRNCMALVVNECERKGRMKKAQCPN-------CKHWFCFRCKLKW 154
+V +CP +C +V K Q P+ C FCF C W
Sbjct: 233 TNSFVECNRLLKWCPAPDCHHVV-----------KVQYPDAKPVRCKCGRQFCFNCGENW 281
Query: 155 HGGYHCEESGNLR------DRNDIAFGQLAERMKWARCPGCGHCVQRKNGCHVM 202
H C+ LR D + +A K CP C +++ GC+ M
Sbjct: 282 HDPVKCKW---LRKWIKKCDDDSETSNWIAANTK--ECPKCHVTIEKDGGCNHM 330
>sp|Q1L8L6|RN19B_DANRE E3 ubiquitin-protein ligase RNF19B OS=Danio rerio GN=rnf19b PE=3
SV=2
Length = 701
Score = 38.9 bits (89), Expect = 0.022, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 67/163 (41%), Gaps = 22/163 (13%)
Query: 15 QEEEGNGSSFTCEICIEPMAANKKFKNKNLCTHPFCQECIAKYIQVMVQDNNTAKIECPG 74
Q G C +C+ A ++ C+H C C+ +Y+++ + ++ ++ CP
Sbjct: 96 QASLGGQELLECPLCLVRQPA-EQLPELQGCSHRSCLCCLRQYLRIEITESRV-QLSCP- 152
Query: 75 LNCQKNLDPFSCKPMIPS-SLFSKWCDLLCEDYVRG-YERSYCPNRNC-MALVVNECERK 131
C + L P+ ++ +L K+ + L + + +CP +C A++ + C
Sbjct: 153 -ECAERLAPWQVALILDDPNLMEKYEEFLLRRCLASDPDCRWCPAPDCGFAVIASGC--- 208
Query: 132 GRMKKAQCP-------NCKHWFCFRCKLKWHGGYHCEESGNLR 167
A CP C FC+ CK WH C+ + R
Sbjct: 209 -----ASCPRLVCRREGCGAEFCYHCKQAWHPNQTCDSARQQR 246
>sp|Q22431|ARI2_CAEEL Probable protein ariadne-2 OS=Caenorhabditis elegans GN=T12E12.1
PE=3 SV=2
Length = 482
Score = 38.9 bits (89), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 13/166 (7%)
Query: 45 CTHPFCQECIAKYIQVMVQDNNTAKIECPGLNCQKNLDPFSCKPMIPSS--LFSKWCDLL 102
C H FC+ C +++ + + ++IEC C+ +I +S + K+ L
Sbjct: 145 CGHCFCEHCWKSHVESRLSEGVASRIECMESECEVYAPSEFVLSIIKNSPVIKLKYERFL 204
Query: 103 CEDYVRGYER-SYCPNRNCMALVVNECERKGRMKKAQCPNCKHWFCFRCKLKWHGGYHCE 161
D V + +C C +++ E K K+ C C FC +C +H CE
Sbjct: 205 LRDMVNSHPHLKFCVGNEC-PVIIRSTEVKP--KRVTCMQCHTSFCVKCGADYHAPTSCE 261
Query: 162 ESGNL----RDRNDIAFGQLAERMKWARCPGCGHCVQRKNGCHVMQ 203
D ++ A ++ K CP C C+++ GC+ +Q
Sbjct: 262 TIKQWMTKCADDSETA-NYISAHTK--DCPQCHSCIEKAGGCNHIQ 304
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.479
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,026,245
Number of Sequences: 539616
Number of extensions: 3505436
Number of successful extensions: 11336
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 139
Number of HSP's that attempted gapping in prelim test: 11058
Number of HSP's gapped (non-prelim): 308
length of query: 208
length of database: 191,569,459
effective HSP length: 112
effective length of query: 96
effective length of database: 131,132,467
effective search space: 12588716832
effective search space used: 12588716832
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)