BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035734
(225 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5SVZ6|ZMYM1_HUMAN Zinc finger MYM-type protein 1 OS=Homo sapiens GN=ZMYM1 PE=2 SV=1
Length = 1142
Score = 97.1 bits (240), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 114/227 (50%), Gaps = 19/227 (8%)
Query: 8 HIRDMMKKKKMMILVVNFNPFCWLRQRLAFHGHDESKDSSNRGNFLELLRF-LTDHNEDI 66
H + + KK + L++ N +Q L G+D+S S N+GNFLELL D E+
Sbjct: 543 HSKQIEGNKKYLKLIIE-NILFLGKQCLPLRGNDQSVSSVNKGNFLELLEMRAKDKGEET 601
Query: 67 -----NVVTFDNAPGNLQMTSNEIKKEIVSCVAIETTNIIINEMGDV-LFSLLINESHDI 120
+ V F N S +I+ +I+ + E I+NE+ D FS++ +E+ +
Sbjct: 602 FRLMNSQVDFYN--------STQIQSDIIEIIKTEMLQDIVNEINDSSAFSIICDETINS 653
Query: 121 SVKEQMVVVLRYVDKNGYVV---ERFIGIEHITSTTSISLKEALDRLFSKHGLSMSRLRG 177
++KEQ+ + +RY K+ + ERF+G T L + + G+ M ++ G
Sbjct: 654 AMKEQLSICVRYPQKSSKAILIKERFLGFVDTEEMTGTHLHRTIKTYLQQIGVDMDKIHG 713
Query: 178 QGYDGASNMQGEFNGLKALILEDNKCPYFIHCFAHQLQLALISVAKK 224
Q YD +N++ +FN + A ++ +IHC+AH L L++I K+
Sbjct: 714 QAYDSTTNLKIKFNKIAAEFKKEEPRALYIHCYAHFLDLSIIRFCKE 760
>sp|O95789|ZMYM6_HUMAN Zinc finger MYM-type protein 6 OS=Homo sapiens GN=ZMYM6 PE=2 SV=2
Length = 1325
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 110 FSLLINESHDISVKEQMVVVLRYVDKNGYVV--ERFIGIEHITSTTSISLKEALDRLFSK 167
F+L I+ES +IS ++ +R++D + V E IE T T + E +++
Sbjct: 908 FALQIDESSEISNITLLLCYIRFIDYDCRDVKEELLFCIEMPTQITGFEIFELINKYIDS 967
Query: 168 HGLSMSRLRGQGYDGASNMQGEFNGLKALILE-DNKCPYFIHCFAHQLQL 216
L+ G DGA++M G ++GLKA I E F HCF H+ +L
Sbjct: 968 KSLNWKHCVGLCTDGAASMTGRYSGLKAKIQEVAMNTAAFTHCFIHRERL 1017
>sp|O43422|P52K_HUMAN 52 kDa repressor of the inhibitor of the protein kinase OS=Homo
sapiens GN=PRKRIR PE=1 SV=2
Length = 761
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 32 RQRLAFHGHDESKDSS---NRGNFLELLRFLTDHNEDINVVTFDNAPGNLQMTSNEIKKE 88
+Q + GH+ + NF LL + E++ F+ N S +++
Sbjct: 178 KQNIPLDGHEADEIPEGLFTPDNFQALLECRINSGEEVLRKRFETTAVNTLFCSKTQQRQ 237
Query: 89 IV----SCVAIETTNIIINEMGDV-LFSLLINESHDISVKEQMVVVLRYVDKNGYVVERF 143
++ SC+ ET + E+ D FS++ ++ DI+ +E + V++R+VD++ + E F
Sbjct: 238 MLEICESCIREET----LREVRDSHFFSIITDDVVDIAGEEHLPVLVRFVDESHNLREEF 293
Query: 144 IGIEHITSTTSISLKEALDRLFSKHGLSMSRLRGQGYDGASNMQGEFNGLKALILEDNKC 203
IG + I + + K GL+M RGQ Y +S + + + +LE
Sbjct: 294 IGFLPYEADAEILAVKFHTMITEKWGLNMEYCRGQAYIVSSGFSSKMKVVASRLLEKYPQ 353
Query: 204 PYFIHCFAHQLQLAL 218
+ C + L + L
Sbjct: 354 AIYTLCSSCALNMWL 368
>sp|Q9CUX1|P52K_MOUSE 52 kDa repressor of the inhibitor of the protein kinase OS=Mus
musculus GN=Prkrir PE=2 SV=2
Length = 758
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 16/188 (8%)
Query: 32 RQRLAFHGHDESKDSSNRG-----NFLELLRFLTDHNEDINVVTFDNAPGNLQMTSNEIK 86
+Q + GH+ D G NF LL + E++ F+ N S +
Sbjct: 174 KQNIPLDGHE--ADEVPEGLFAPDNFQALLECRINSGEEVLRKRFEATAVNTLFCSKTQQ 231
Query: 87 KEIV----SCVAIETTNIIINEMGDV-LFSLLINESHDISVKEQMVVVLRYVDKNGYVVE 141
+ ++ SC+ ET + E+ D FS++ ++ DI+ +E + V++R+VD + E
Sbjct: 232 RHMLEICESCIREET----LREVRDSHFFSIITDDVVDIAGEEHLPVLVRFVDDAHNLRE 287
Query: 142 RFIGIEHITSTTSISLKEALDRLFSKHGLSMSRLRGQGYDGASNMQGEFNGLKALILEDN 201
F+G + I + + K GL+M RGQ Y +S + + + +LE
Sbjct: 288 EFVGFLPYEADAEILAVKFHTTITEKWGLNMEYCRGQAYIVSSGFSSKMKVVASRLLEKY 347
Query: 202 KCPYFIHC 209
+ C
Sbjct: 348 PQAVYTLC 355
>sp|Q4R6P1|F200A_MACFA Protein FAM200A OS=Macaca fascicularis GN=FAM200A PE=2 SV=1
Length = 573
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 73/155 (47%), Gaps = 6/155 (3%)
Query: 65 DINVVTFDNAPGN----LQMTSNEIKKEIVSCVAIETTNIIINEMGDVLFSLLINESHDI 120
D+ FD+ + + ++ N I + I + +I + F++ ++ES DI
Sbjct: 91 DMVRTIFDDKSADKLRTIPLSDNTISRRICTIAKHLEAMLITRLQSGIDFAIQLDESTDI 150
Query: 121 SVKEQMVVVLRYVDKNGYVVERFIGIEHITSTTSISLKEALDR-LFSKHGLSMSRLRGQG 179
+ ++V +RYV ++ +V + + + T + L L+ + ++ L+ +G
Sbjct: 151 ASCPTLLVYVRYVWQDDFVEDLLCCLNLNSHITGLDLFTELENCIVGQYKLNWKHCKGIS 210
Query: 180 YDGASNMQGEFNGLKALILE-DNKCPYFIHCFAHQ 213
DGA+NM G+ + L +LE + + HCF H+
Sbjct: 211 SDGAANMTGKHSRLTEKLLEATHNNALWNHCFIHR 245
>sp|Q8TCP9|F200A_HUMAN Protein FAM200A OS=Homo sapiens GN=FAM200A PE=2 SV=1
Length = 573
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 72/155 (46%), Gaps = 6/155 (3%)
Query: 65 DINVVTFDNAPGN----LQMTSNEIKKEIVSCVAIETTNIIINEMGDVLFSLLINESHDI 120
D+ FD+ + + ++ N I + I + +I + F++ ++ES DI
Sbjct: 91 DMVRTIFDDKSADKLRTIPLSDNTISRRICTIAKHLEAMLITRLQSGIDFAIQLDESTDI 150
Query: 121 SVKEQMVVVLRYVDKNGYVVERFIGIEHITSTTSISLKEALDR-LFSKHGLSMSRLRGQG 179
+ ++V +RYV ++ +V + + + T + L L+ L ++ L+ +G
Sbjct: 151 ASCPTLLVYVRYVWQDDFVEDLLCCLNLNSHITGLDLFTELENCLLGQYKLNWKHCKGIS 210
Query: 180 YDGASNMQGEFNGLKALILE-DNKCPYFIHCFAHQ 213
DG +NM G+ + L +LE + + HCF H+
Sbjct: 211 SDGTANMTGKHSRLTEKLLEATHNNAVWNHCFIHR 245
>sp|Q6R2W3|SCND3_HUMAN SCAN domain-containing protein 3 OS=Homo sapiens GN=SCAND3 PE=2 SV=1
Length = 1325
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 10/132 (7%)
Query: 101 IINEMGDVL---------FSLLINESHDISVKEQMVVVLRYVDKNGYVVERFIGIEHITS 151
+ N+M D L FSL ++E DI+ ++V +R+ + E F T+
Sbjct: 881 LANDMEDQLIEQIKLAKYFSLQLDECRDIANMIILLVYVRFEHDDDIKEEFFFSASLPTN 940
Query: 152 TTSISLKEAL-DRLFSKHGLSMSRLRGQGYDGASNMQGEFNGLKALILEDNKCPYFIHCF 210
TTS L EA+ + + +K GL G DGA++M G+ + + I E HCF
Sbjct: 941 TTSSELYEAVKNYIVNKCGLEFKFCVGVCSDGAASMTGKHSEVVTQIKELAPECKTTHCF 1000
Query: 211 AHQLQLALISVA 222
H+ LA+ ++
Sbjct: 1001 IHRESLAMKKIS 1012
>sp|P0CF97|F200B_HUMAN Putative protein FAM200B OS=Homo sapiens GN=FAM200B PE=5 SV=1
Length = 657
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 6/151 (3%)
Query: 72 DNAPGNLQMTSNEIKKEIVSCVAIE--TTNIIINEMGDVLFSLLINESHDISVKEQMVVV 129
D + L+ N+ + C E T +I + F++ ++ES DI ++V
Sbjct: 185 DKSADKLKTIPNDNTVSLRICTIAEHLETMLITRLQSGIDFAIQLDESTDIGSCTTLLVY 244
Query: 130 LRYVDKNGYVVERFIGIEHITSTTS--ISLKEALDRLFSKHGLSMSRLRGQGYDGASNMQ 187
+RY ++ + +E F+ ++TS S E R+ ++ L+ +G DG + M
Sbjct: 245 VRYAWQDDF-LEDFLCFLNLTSHLSGLDIFTELERRIVGQYKLNWKNCKGITSDGTATMT 303
Query: 188 GEFNG-LKALILEDNKCPYFIHCFAHQLQLA 217
G+ + +K L+ N + HCF H+ LA
Sbjct: 304 GKHSRVIKKLLEVTNNGAVWNHCFIHREGLA 334
>sp|Q9HCI6|K1586_HUMAN Uncharacterized protein KIAA1586 OS=Homo sapiens GN=KIAA1586 PE=2
SV=2
Length = 787
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 53 LELLRFLTDHNEDINVVTFDNAPGNLQMTSNEIKKEIVSCVAIETTNIIINEMGDVLFSL 112
+E R L + N ++N + N + ++ I + I + ++ II E + +
Sbjct: 266 IEGARELQEKNGEVNCL-------NTRYSATRIAEHIAKEMKMKIFKNIIEENAKI--CI 316
Query: 113 LINESHDISVKEQMVVVLRYVDKNGYV-VERFIGIEHITSTTSISLKEALDRLFSKHGLS 171
+I+E+ +S K +V+ L+ ++ V F+ ++ + ST + + L + G +
Sbjct: 317 IIDEASTVSKKTTLVIYLQCTIQSAPAPVMLFVALKELVSTIAECIVNTLLTTLNDCGFT 376
Query: 172 MSRLRGQ----GYDGASNMQGEFNGLKALILEDNKCPYFIHCFAHQLQLAL 218
L+ DGA+ + G +G+ +LE+ +C H+LQL+L
Sbjct: 377 NEYLKANLIAFCSDGANTILGRKSGVATKLLENFPEIIIWNCLNHRLQLSL 427
>sp|O60290|ZN862_HUMAN Zinc finger protein 862 OS=Homo sapiens GN=ZNF862 PE=2 SV=2
Length = 1169
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 13/116 (11%)
Query: 111 SLLINESHDISVKEQMVVVLRYVDKNGYVVERFIGIEHITSTTS-------ISLKEALDR 163
S+L++ S D S + + + +RY K V E +I + + S T+ +S + LD
Sbjct: 625 SVLLDSSTDASEQACVGIYIRYF-KQMEVKESYITLAPLYSETADGYFETIVSALDELDI 683
Query: 164 LFSKHGLSMSRLRGQGYDGASNMQGEFNGLKALILEDNKCPYFIHCFAHQLQLALI 219
F K G + G G DG S M GL E +HC AH+L LA++
Sbjct: 684 PFRKPGWVV----GLGTDG-SAMLSCRGGLVEKFQEVIPQLLPVHCVAHRLHLAVV 734
>sp|Q6EKJ0|GTD2B_HUMAN General transcription factor II-I repeat domain-containing protein
2B OS=Homo sapiens GN=GTF2IRD2B PE=1 SV=1
Length = 949
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 108 VLFSLLINESHDISVKEQMVVVLRYVDKNGYVVERFIGIEHITSTTS---ISLKEALDRL 164
V +S+ I+E DI+ Q+ + +R VD+N V E + +T T S I L+ +++
Sbjct: 545 VAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLR--VEKS 602
Query: 165 FSKHGLSMSRLRGQGYDGASNMQGEFNGL 193
K ++ SRL G M NGL
Sbjct: 603 LKKFCINWSRLVSVASTGTPAMVDANNGL 631
>sp|P25189|MYP0_HUMAN Myelin protein P0 OS=Homo sapiens GN=MPZ PE=1 SV=1
Length = 248
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 10/59 (16%)
Query: 28 FCWLRQRLAFHG----------HDESKDSSNRGNFLELLRFLTDHNEDINVVTFDNAPG 76
+CWLR++ A H KD+S RG +L + DH+ V+ A G
Sbjct: 181 YCWLRRQAALQRRLSAMEKGKLHKPGKDASKRGRQTPVLYAMLDHSRSTKAVSEKKAKG 239
>sp|Q3ZYA3|UVRC_DEHSC UvrABC system protein C OS=Dehalococcoides sp. (strain CBDB1)
GN=uvrC PE=3 SV=1
Length = 607
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 152 TTSISLKEALDRLFSKHGLSMSRLRGQGYDGASNMQGEFNGLKALILEDNKCPYFIH 208
++S++L +AL L + GLS+ R +GYD SN+QG N + ++++ +N P H
Sbjct: 373 SSSVTLTDALAELQTALGLSLPPQRIEGYD-ISNIQGT-NAVGSMVVFENGKPQKAH 427
>sp|A5FQB7|UVRC_DEHSB UvrABC system protein C OS=Dehalococcoides sp. (strain BAV1)
GN=uvrC PE=3 SV=1
Length = 607
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 152 TTSISLKEALDRLFSKHGLSMSRLRGQGYDGASNMQGEFNGLKALILEDNKCPYFIH 208
++S++L +AL L + GLS+ R +GYD SN+QG N + ++++ +N P H
Sbjct: 373 SSSVTLTDALAELQTALGLSLPPQRIEGYD-ISNIQGT-NAVGSMVVFENGKPQKAH 427
>sp|P06907|MYP0_RAT Myelin protein P0 OS=Rattus norvegicus GN=Mpz PE=1 SV=1
Length = 248
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 10/59 (16%)
Query: 28 FCWLRQRLAFHG----------HDESKDSSNRGNFLELLRFLTDHNEDINVVTFDNAPG 76
+CWLR++ A H SKDSS RG +L + DH+ + + G
Sbjct: 181 YCWLRRQAALQRRLSAMEKGKFHKSSKDSSKRGRQTPVLYAMLDHSRSTKAASEKKSKG 239
>sp|P27573|MYP0_MOUSE Myelin protein P0 OS=Mus musculus GN=Mpz PE=1 SV=1
Length = 248
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 10/59 (16%)
Query: 28 FCWLRQRLAFHG----------HDESKDSSNRGNFLELLRFLTDHNEDINVVTFDNAPG 76
+CWLR++ A H SKDSS RG +L + DH+ + + G
Sbjct: 181 YCWLRRQAALQRRLSAMEKGRFHKSSKDSSKRGRQTPVLYAMLDHSRSTKAASEKKSKG 239
>sp|Q8IZ13|CE054_HUMAN Transposon-derived Buster3 transposase-like protein OS=Homo sapiens
GN=C5orf54 PE=2 SV=1
Length = 594
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Query: 114 INESHDISVKEQMVVVLRYVDKNGYVVERFIGIEHIT-STTSISLKEALDRLFSKHGLSM 172
+ E+ D+ Q++ +RY+ K +VE F+ E + S I + F KH +++
Sbjct: 176 LAETTDMDDCSQLMAFVRYI-KEREIVEEFLFCEPLQLSMKGIDVFNLFRDFFLKHKIAL 234
Query: 173 SRLRGQGYDGASNMQGEFNGLKALILEDNKCPYFIHCFAHQLQLALISVAKK 224
DGAS+M GE + A + ++ HC + L + ++ K
Sbjct: 235 DVCGSVCTDGASSMLGENSEFVAYVKKEIPHIVVTHCLLNPHALVIKTLPTK 286
>sp|Q86UP8|GTD2A_HUMAN General transcription factor II-I repeat domain-containing protein
2A OS=Homo sapiens GN=GTF2IRD2 PE=2 SV=2
Length = 949
Score = 31.6 bits (70), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 108 VLFSLLINESHDISVKEQMVVVLRYVDKNGYVVERFIGIEHITSTTSIS-LKEALDRLFS 166
V +S+ I+E DI+ Q+ + +R VD+N V E + +T T S + + +++
Sbjct: 545 VAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFSRVEKSLK 604
Query: 167 KHGLSMSRLRGQGYDGASNMQGEFNGL 193
K + S+L G M NGL
Sbjct: 605 KFCIDWSKLVSVASTGTPAMVDANNGL 631
>sp|Q8VEH5|EPMIP_MOUSE EPM2A-interacting protein 1 OS=Mus musculus GN=Epm2aip1 PE=2 SV=1
Length = 606
Score = 30.8 bits (68), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
Query: 82 SNEIKKEIVSCVAIETTNIIINEMGDV-LFSLLINESHDISVKEQMVVVLRYVDKNGYVV 140
S EI ++ + + + + N D +SL +++ ++ + ++V +R V ++ V
Sbjct: 147 SPEITRQRILSIDSNLRSQLFNRARDFKAYSLALDDQAFVAYENYLLVFIRGVGRDLEVQ 206
Query: 141 ERFIGIEHITSTTSI-SLKEALDRLFSKHGLSMSRLRGQGYDGASNMQGEFNGLKALILE 199
E + I ++T S+ +L A+ GLS+ R+ G M GE +GL + + E
Sbjct: 207 EDLLTIINLTHHFSVGALMSAILEALQTAGLSLQRMVGLTTTHTLRMIGENSGLVSYMRE 266
Query: 200 DNKCP 204
P
Sbjct: 267 KAVSP 271
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,857,740
Number of Sequences: 539616
Number of extensions: 3160735
Number of successful extensions: 8614
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 8603
Number of HSP's gapped (non-prelim): 35
length of query: 225
length of database: 191,569,459
effective HSP length: 113
effective length of query: 112
effective length of database: 130,592,851
effective search space: 14626399312
effective search space used: 14626399312
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)