BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035736
(101 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q39255|SKP1A_ARATH SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1
Length = 160
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/102 (74%), Positives = 88/102 (86%), Gaps = 3/102 (2%)
Query: 3 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKK 62
++KKI LKSSDGE+FEV+EAVALESQTI HM+EDDC DNG+PLPNVTSKIL+KVIEYCK+
Sbjct: 2 SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKR 61
Query: 63 HVEASKSDDRATSGV---DDDLKAWDTDFVKVDQATLFDLIL 101
HVEA+ S A G DDDLKAWD DF+K+DQATLF+LIL
Sbjct: 62 HVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELIL 103
>sp|Q9FHW7|SKP1B_ARATH SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1
Length = 171
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/114 (69%), Positives = 90/114 (78%), Gaps = 13/114 (11%)
Query: 1 MSTSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYC 60
MST +KITLKSSDGE FE+DEAVALESQTIKHMIEDDC DNGIPLPNVTSKILSKVIEYC
Sbjct: 1 MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYC 60
Query: 61 KKHVEASKSDD-------------RATSGVDDDLKAWDTDFVKVDQATLFDLIL 101
K+HVEA++ + A+ D+DLK WD++F+KVDQ TLFDLIL
Sbjct: 61 KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLIL 114
>sp|Q9LNT9|ASK4_ARATH SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1
Length = 163
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/103 (70%), Positives = 84/103 (81%), Gaps = 4/103 (3%)
Query: 3 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKK 62
T K I LKSSDGE+FE++EAVA++SQTIKHMIEDDCADNGIPLPNVT IL+KVIEYCKK
Sbjct: 4 TKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKK 63
Query: 63 HVEASKS----DDRATSGVDDDLKAWDTDFVKVDQATLFDLIL 101
HVEA+ D S +D+LK WD++FVKVDQ TLFDLIL
Sbjct: 64 HVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLIL 106
>sp|Q9SL93|ASK3_ARATH SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1
Length = 163
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/102 (69%), Positives = 79/102 (77%), Gaps = 4/102 (3%)
Query: 3 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKK 62
T K I LKSSDGE+FEV+EAVA+ESQTIKHMIEDDC DNGIPLPNVT IL+KVIEYCKK
Sbjct: 4 TKKMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKK 63
Query: 63 HVEASKS----DDRATSGVDDDLKAWDTDFVKVDQATLFDLI 100
HVEA+ D S + +LK WD DFVKVD TLFDL+
Sbjct: 64 HVEAAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLL 105
>sp|O49484|ASK11_ARATH SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1
Length = 152
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 73/99 (73%), Gaps = 5/99 (5%)
Query: 3 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKK 62
+SK I L SSDG++FEV+EAVA++SQTI HM+EDDC +GIPL NV SKIL KVIEYCKK
Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKK 61
Query: 63 HVEASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLIL 101
H D A ++DL WD F+ ++Q+T+F+LIL
Sbjct: 62 H-----HVDEANPISEEDLNNWDEKFMDLEQSTIFELIL 95
>sp|Q9LSX8|ASK10_ARATH SKP1-like protein 10 OS=Arabidopsis thaliana GN=ASK10 PE=1 SV=1
Length = 152
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 70/101 (69%), Gaps = 6/101 (5%)
Query: 1 MSTSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYC 60
MST KKI LKSSDG +FEV+E A + QTI HM EDDC DNGIPLP VT KIL VIEYC
Sbjct: 1 MST-KKIILKSSDGHSFEVEEEAACQCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYC 59
Query: 61 KKHVEASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLIL 101
KH D A D+DLK WD +F++ Q+T+FDLI+
Sbjct: 60 NKH-----HVDAANPCSDEDLKKWDKEFMEKYQSTIFDLIM 95
>sp|O65674|ASK12_ARATH SKP1-like protein 12 OS=Arabidopsis thaliana GN=ASK12 PE=1 SV=1
Length = 152
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 74/100 (74%), Gaps = 7/100 (7%)
Query: 3 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKK 62
+SK I L SSDG++FEV+EAVA++SQTI HM+EDDC +GIPL NV SKIL KVIEYCKK
Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKK 61
Query: 63 -HVEASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLIL 101
HV D A ++DL WD F+ ++Q+T+F+LIL
Sbjct: 62 YHV------DEANPISEEDLNKWDEKFMDLEQSTIFELIL 95
>sp|Q9M1X5|ASK13_ARATH SKP1-like protein 13 OS=Arabidopsis thaliana GN=ASK13 PE=1 SV=1
Length = 154
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 73/100 (73%), Gaps = 6/100 (6%)
Query: 4 SKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKH 63
SK + L SSDGE+F+V+EAVA++SQTI HMIEDDC NG+P+ NVT ILSKVIEYCKKH
Sbjct: 2 SKMVMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCKKH 61
Query: 64 VEASKSDDRATSGVDDDLKAWDTDFVKV--DQATLFDLIL 101
V + D T D+LK WD +F+K +TLFD++L
Sbjct: 62 VVS----DSPTEESKDELKKWDAEFMKALEQSSTLFDVML 97
>sp|Q9LSX9|ASK9_ARATH SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK9 PE=1 SV=1
Length = 153
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 70/101 (69%), Gaps = 7/101 (6%)
Query: 1 MSTSKKITLKSSDGEAFEVDEAVALESQTI-KHMIEDDCADNGIPLPNVTSKILSKVIEY 59
MST KKI LKSSDG +FEV+E A + Q I HM E+DC DNGIPLPNVT KIL+ VIEY
Sbjct: 1 MST-KKIILKSSDGHSFEVEEEAARQCQIIIAHMSENDCTDNGIPLPNVTGKILAMVIEY 59
Query: 60 CKKHVEASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLI 100
C KH D A DDDLK WD +F++ D +T+FDLI
Sbjct: 60 CNKH-----HVDAANPCSDDDLKKWDKEFMEKDTSTIFDLI 95
>sp|Q9LSY0|ASK7_ARATH SKP1-like protein 7 OS=Arabidopsis thaliana GN=ASK7 PE=2 SV=1
Length = 125
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 67/98 (68%), Gaps = 5/98 (5%)
Query: 3 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKK 62
++KKI LKSSDG+ FE++E A + QTI HMIE +C DN IP+ NVTS+IL VIEYC K
Sbjct: 2 STKKIMLKSSDGKMFEIEEETARQCQTIAHMIEAECTDNVIPVSNVTSEILEMVIEYCNK 61
Query: 63 HVEASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLI 100
H D A D+DLK WD +F++ DQ T+F L+
Sbjct: 62 H-----HVDAANPCSDEDLKKWDKEFMEKDQYTIFHLM 94
>sp|O81057|ASK14_ARATH SKP1-like protein 14 OS=Arabidopsis thaliana GN=ASK14 PE=1 SV=1
Length = 149
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 68/100 (68%), Gaps = 10/100 (10%)
Query: 3 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKK 62
+S KI L SSDGE+FEV+EAVA + + ++HMIEDDC +PL NVT KILS V+EYCKK
Sbjct: 2 SSNKIVLSSSDGESFEVEEAVARKLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCKK 61
Query: 63 HVEASKSDDRATSGVDDDLKAWDTDFV-KVDQATLFDLIL 101
HV +S D+ K WD +F+ K DQ T+F L+L
Sbjct: 62 HVVDEES---------DEFKTWDEEFMKKFDQPTVFQLLL 92
>sp|Q1PEL7|ASK15_ARATH SKP1-like protein 15 OS=Arabidopsis thaliana GN=ASK15 PE=2 SV=2
Length = 177
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 70/112 (62%), Gaps = 17/112 (15%)
Query: 3 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKK 62
+S KI L SSDGE+F+V+E VA + Q +KH++EDDC N IPL NVT ILS V+EYCKK
Sbjct: 2 SSNKIVLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCKK 61
Query: 63 HV------------EASKSDDRATSGVDDDLKAWDTDFVK-VDQATLFDLIL 101
HV + K DD A +D AWD +F+K +D T+F LIL
Sbjct: 62 HVDDVVDDDASEEPKKKKPDDEAKQNLD----AWDAEFMKNIDMETIFKLIL 109
>sp|Q9M1X4|ASK5_ARATH SKP1-like protein 5 OS=Arabidopsis thaliana GN=ASK5 PE=1 SV=1
Length = 153
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 70/99 (70%), Gaps = 10/99 (10%)
Query: 4 SKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKH 63
S KI LKSSDG++FE+DE VA +S I HM+ED CA + IPL NVTSKIL VI+YC+KH
Sbjct: 2 STKIMLKSSDGKSFEIDEDVARKSIAINHMVEDGCATDVIPLRNVTSKILKIVIDYCEKH 61
Query: 64 VEASKSDDRATSGVDDDLKAWDTDFVKVDQAT-LFDLIL 101
V++ + ++DLK WD DF+K + T LFD+++
Sbjct: 62 VKSKE---------EEDLKEWDADFMKTIETTILFDVMM 91
>sp|O81058|ASK19_ARATH SKP1-like protein 19 OS=Arabidopsis thaliana GN=ASK19 PE=1 SV=1
Length = 200
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 75/132 (56%), Gaps = 33/132 (25%)
Query: 3 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKK 62
+SKKI L SSDGE+F+V+E VA + Q + H+IEDDCA N IP+PNVT +IL+KVIEYCKK
Sbjct: 2 SSKKIVLTSSDGESFKVEEVVARKLQIVGHIIEDDCATNKIPIPNVTGEILAKVIEYCKK 61
Query: 63 HVE----------------------ASKSDDRA----TSGVD------DDLKAWDTDFVK 90
HVE K DD A T G D + L WD F+K
Sbjct: 62 HVEDDDDVVETHESSTKGDKTVEEAKKKPDDVAVPESTEGDDEAEDKKEKLNEWDAKFMK 121
Query: 91 -VDQATLFDLIL 101
D T+FD+IL
Sbjct: 122 DFDIKTIFDIIL 133
>sp|Q9SL65|ASK17_ARATH SKP1-like protein 17 OS=Arabidopsis thaliana GN=ASK17 PE=1 SV=1
Length = 150
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 66/99 (66%), Gaps = 9/99 (9%)
Query: 3 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKK 62
+SKKI L SSD E FE+DEAVA + Q + HMI+DDCAD I L NVT KIL+ +IEYCKK
Sbjct: 2 SSKKIVLTSSDDECFEIDEAVARKMQMVAHMIDDDCADKAIRLQNVTGKILAIIIEYCKK 61
Query: 63 HVEASKSDDRATSGVDDDLKAWDTDFVK-VDQATLFDLI 100
HV+ ++ + + WD +FVK +D TLF L+
Sbjct: 62 HVDDVEAKNEFVT--------WDAEFVKNIDMDTLFKLL 92
>sp|O81055|ASK16_ARATH SKP1-like protein 16 OS=Arabidopsis thaliana GN=ASK16 PE=1 SV=1
Length = 170
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 66/109 (60%), Gaps = 10/109 (9%)
Query: 3 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKK 62
+S KI L SSD E+FEV+EAVA + + I HMI+DDCAD IPL NVT IL+ VIEYCKK
Sbjct: 2 SSNKIVLTSSDDESFEVEEAVARKLKVIAHMIDDDCADKAIPLENVTGNILALVIEYCKK 61
Query: 63 HV---------EASKSDDRATSGVDDDLKAWDTDFVK-VDQATLFDLIL 101
HV + + ++L+ WD +F+K D T+ LIL
Sbjct: 62 HVLDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLIL 110
>sp|Q9LSY1|ASK8_ARATH SKP1-like protein 8 OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=1
Length = 152
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 66/99 (66%), Gaps = 6/99 (6%)
Query: 1 MSTSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYC 60
MST KKI LKSS+G+ FE++E A + QTI HMIE +C DN I + +TS+IL VIEYC
Sbjct: 1 MST-KKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYC 59
Query: 61 KKHVEASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDL 99
KH D A DDDL+ WD +F++ D++T+F L
Sbjct: 60 NKH-----HVDAANPCSDDDLEKWDKEFMEKDKSTIFAL 93
>sp|Q9SY65|ASK18_ARATH SKP1-like protein 18 OS=Arabidopsis thaliana GN=ASK18 PE=1 SV=2
Length = 158
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Query: 3 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKK 62
+S KI L SSDGE+FE+DEAVA + I HM+ED+CA IPL NVT ILSK+IEY K
Sbjct: 2 SSNKILLTSSDGESFEIDEAVARKFLIIVHMMEDNCAGEAIPLENVTGDILSKIIEYAKM 61
Query: 63 HVEASKSDDRATSGVDDDLKAWDTDFV-KVDQATLFDLIL 101
HV S++ +L +WD F+ K+D T+F +IL
Sbjct: 62 HVN-EPSEEDEDEEAKKNLDSWDAKFMEKLDLETIFKIIL 100
>sp|P52285|SKP1A_DICDI SCF ubiquitin ligase complex protein SKP1a OS=Dictyostelium
discoideum GN=fpaA PE=1 SV=1
Length = 162
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
Query: 7 ITLKSSDGEAFEVDEAVALESQTIKHMIED-DCADNGIPLPNVTSKILSKVIEYCKKHVE 65
+ L+SSD + FE+++ +A S TIK+MIED +D+ IPLPNVTS IL KV++YC+ H +
Sbjct: 4 VKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDSPIPLPNVTSTILEKVLDYCRHHHQ 63
Query: 66 --ASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLIL 101
+ + DD+ DD+ +D DF KVDQ TLF+LIL
Sbjct: 64 HPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELIL 101
>sp|Q557E4|SKP1B_DICDI SCF ubiquitin ligase complex protein SKP1b OS=Dictyostelium
discoideum GN=fpaB-1 PE=1 SV=1
Length = 162
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 67/98 (68%), Gaps = 3/98 (3%)
Query: 7 ITLKSSDGEAFEVDEAVALESQTIKHMIED-DCADNGIPLPNVTSKILSKVIEYCKKHVE 65
+ L+SSD + FE+++ +A S TIK+MIED +D IPLPNVTS IL KV++YC+ H +
Sbjct: 4 VKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDAPIPLPNVTSTILEKVLDYCRHHHQ 63
Query: 66 --ASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLIL 101
+ + DD+ DD+ +D DF KVDQ TLF+LIL
Sbjct: 64 HPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELIL 101
>sp|Q1PEF6|ASK6_ARATH SKP1-like protein 6 OS=Arabidopsis thaliana GN=ASK6 PE=3 SV=1
Length = 85
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 10/75 (13%)
Query: 28 QTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGVDDDLKAWDTD 87
IK M EDDCADNGIPLPNVTSKIL VIEYCKKHV SK ++DLK WD +
Sbjct: 1 MMIKGMAEDDCADNGIPLPNVTSKILLLVIEYCKKHVVESK---------EEDLKKWDAE 51
Query: 88 FV-KVDQATLFDLIL 101
F+ K++Q+ LFD+++
Sbjct: 52 FMKKMEQSILFDVMM 66
>sp|Q71U00|SKP1_XENLA S-phase kinase-associated protein 1 OS=Xenopus laevis GN=skp1 PE=1
SV=3
Length = 163
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 64/102 (62%), Gaps = 7/102 (6%)
Query: 7 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCK 61
I L+SSDGE FEVD +A +S TIK M+ED + D+ +PLPNV + IL KVI++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEASKSDDRATSG--VDDDLKAWDTDFVKVDQATLFDLIL 101
H + + + DD+ WD +F+KVDQ TLF+LIL
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELIL 105
>sp|Q5R512|SKP1_PONAB S-phase kinase-associated protein 1 OS=Pongo abelii GN=SKP1 PE=2
SV=1
Length = 163
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 64/102 (62%), Gaps = 7/102 (6%)
Query: 7 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCK 61
I L+SSDGE FEVD +A +S TIK M+ED + D+ +PLPNV + IL KVI++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEASKSDDRATSG--VDDDLKAWDTDFVKVDQATLFDLIL 101
H + + + DD+ WD +F+KVDQ TLF+LIL
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELIL 105
>sp|Q4R5B9|SKP1_MACFA S-phase kinase-associated protein 1 OS=Macaca fascicularis GN=SKP1
PE=2 SV=1
Length = 163
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 64/102 (62%), Gaps = 7/102 (6%)
Query: 7 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCK 61
I L+SSDGE FEVD +A +S TIK M+ED + D+ +PLPNV + IL KVI++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEASKSDDRATSG--VDDDLKAWDTDFVKVDQATLFDLIL 101
H + + + DD+ WD +F+KVDQ TLF+LIL
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELIL 105
>sp|P63208|SKP1_HUMAN S-phase kinase-associated protein 1 OS=Homo sapiens GN=SKP1 PE=1
SV=2
Length = 163
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 64/102 (62%), Gaps = 7/102 (6%)
Query: 7 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCK 61
I L+SSDGE FEVD +A +S TIK M+ED + D+ +PLPNV + IL KVI++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEASKSDDRATSG--VDDDLKAWDTDFVKVDQATLFDLIL 101
H + + + DD+ WD +F+KVDQ TLF+LIL
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELIL 105
>sp|Q5ZKF5|SKP1_CHICK S-phase kinase-associated protein 1 OS=Gallus gallus GN=SKP1 PE=2
SV=1
Length = 163
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 64/102 (62%), Gaps = 7/102 (6%)
Query: 7 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCK 61
I L+SSDGE FEVD +A +S TIK M+ED + D+ +PLPNV + IL KVI++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEASKSDDRATSG--VDDDLKAWDTDFVKVDQATLFDLIL 101
H + + + DD+ WD +F+KVDQ TLF+LIL
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELIL 105
>sp|P63209|SKP1_CAVPO S-phase kinase-associated protein 1 OS=Cavia porcellus GN=SKP1 PE=2
SV=2
Length = 163
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 64/102 (62%), Gaps = 7/102 (6%)
Query: 7 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCK 61
I L+SSDGE FEVD +A +S TIK M+ED + D+ +PLPNV + IL KVI++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEASKSDDRATSG--VDDDLKAWDTDFVKVDQATLFDLIL 101
H + + + DD+ WD +F+KVDQ TLF+LIL
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELIL 105
>sp|Q3ZCF3|SKP1_BOVIN S-phase kinase-associated protein 1 OS=Bos taurus GN=SKP1 PE=2 SV=1
Length = 163
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 64/102 (62%), Gaps = 7/102 (6%)
Query: 7 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCK 61
I L+SSDGE FEVD +A +S TIK M+ED + D+ +PLPNV + IL KVI++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEASKSDDRATSG--VDDDLKAWDTDFVKVDQATLFDLIL 101
H + + + DD+ WD +F+KVDQ TLF+LIL
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELIL 105
>sp|Q6PEC4|SKP1_RAT S-phase kinase-associated protein 1 OS=Rattus norvegicus GN=Skp1
PE=2 SV=3
Length = 163
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 64/102 (62%), Gaps = 7/102 (6%)
Query: 7 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCK 61
I L+SSDGE FEVD +A +S TIK M+ED + D+ +PLPNV + IL KVI++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEASKSDDRATSG--VDDDLKAWDTDFVKVDQATLFDLIL 101
H + + + DD+ WD +F+KVDQ TLF+LIL
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELIL 105
>sp|Q9WTX5|SKP1_MOUSE S-phase kinase-associated protein 1 OS=Mus musculus GN=Skp1 PE=1
SV=3
Length = 163
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 64/102 (62%), Gaps = 7/102 (6%)
Query: 7 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCK 61
I L+SSDGE FEVD +A +S TIK M+ED + D+ +PLPNV + IL KVI++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 62 KHVEASKSDDRATSG--VDDDLKAWDTDFVKVDQATLFDLIL 101
H + + + DD+ WD +F+KVDQ TLF+LIL
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELIL 105
>sp|C5FHU9|SKP1_ARTOC E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma otae
(strain ATCC MYA-4605 / CBS 113480) GN=sconC PE=3 SV=1
Length = 165
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 63/110 (57%), Gaps = 16/110 (14%)
Query: 2 STSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNG--IPLPNVTSKILSKVIEY 59
+ + KITL SSDG ++ VA S IK+M+ED D+G IP+PNV +L KVIE+
Sbjct: 4 TATSKITLTSSDGVEITIERQVAERSILIKNMLED-LGDSGEAIPIPNVNESVLKKVIEW 62
Query: 60 CKKHVEASKSDDRATSGVDD--------DLKAWDTDFVKVDQATLFDLIL 101
CK H D ++G DD D+ WD F++VDQ LF++IL
Sbjct: 63 CKHH-----KGDPPSTGDDDVDSRRKTTDIDEWDQKFMQVDQEMLFEIIL 107
>sp|Q8TGW7|SKP1_ARTOT E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma otae
GN=sconC PE=2 SV=1
Length = 165
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 63/110 (57%), Gaps = 16/110 (14%)
Query: 2 STSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNG--IPLPNVTSKILSKVIEY 59
+ + KITL SSDG +D VA S IK+M++D D+G IP+PNV +L KVIE+
Sbjct: 4 AATSKITLTSSDGVDITIDRQVAERSILIKNMLKD-LGDSGEAIPIPNVNESVLKKVIEW 62
Query: 60 CKKHVEASKSDDRATSGVDD--------DLKAWDTDFVKVDQATLFDLIL 101
CK H D ++G DD D+ WD F++VDQ LF++IL
Sbjct: 63 CKHH-----KGDPPSTGDDDVDSRRKTTDIDEWDQKFMQVDQEMLFEIIL 107
>sp|D4ARL8|SKP1_ARTBC E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma
benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=sconC
PE=3 SV=1
Length = 164
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 63/110 (57%), Gaps = 16/110 (14%)
Query: 2 STSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNG--IPLPNVTSKILSKVIEY 59
+ + KITL SSDG ++ VA S IK+M+ED D+G IP+PNV +L KVIE+
Sbjct: 4 TATNKITLTSSDGVEVTIERQVAERSILIKNMLED-LGDSGEPIPIPNVNESVLKKVIEW 62
Query: 60 CKKHVEASKSDDRATSGVDD--------DLKAWDTDFVKVDQATLFDLIL 101
C+ H D ++G DD D+ WD F++VDQ LF++IL
Sbjct: 63 CEHH-----KGDPPSTGDDDVDSRRKTTDIDEWDQKFMQVDQEMLFEIIL 107
>sp|Q0CA59|SKP1_ASPTN E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=sconC PE=3
SV=1
Length = 161
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 61/110 (55%), Gaps = 15/110 (13%)
Query: 1 MSTSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNG--IPLPNVTSKILSKVIE 58
MSTS + SSDG VD VA S IK+M+E D + G IP+PNV +L KVIE
Sbjct: 1 MSTSPTLVFTSSDGVDITVDRDVAERSLLIKNMLE-DLGETGEAIPIPNVNEAVLKKVIE 59
Query: 59 YCKKHVEASKSDDRATSGVDD-------DLKAWDTDFVKVDQATLFDLIL 101
+C H +D ++G DD D+ WD F++VDQ LF++IL
Sbjct: 60 WCTHH-----KNDPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIIL 104
>sp|Q9Y709|SKP1_SCHPO Suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=skp1 PE=1 SV=1
Length = 161
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 59/103 (57%), Gaps = 9/103 (8%)
Query: 6 KITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADN-GIPLPNVTSKILSKVIEYCKKHV 64
KI L SSD E F VD+ +A S IK+M+ED N IPLPNV+S +L KV+E+C+ H
Sbjct: 3 KIKLISSDNEEFVVDQLIAERSMLIKNMLEDVGEINVPIPLPNVSSNVLRKVLEWCEHHK 62
Query: 65 E------ASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLIL 101
+SD R D D WD F+ VDQ LF+++L
Sbjct: 63 NDLYSGTEEESDIRLKKSTDID--EWDRKFMAVDQEMLFEIVL 103
>sp|Q8NK13|SKP1_NEUCR E3 ubiquitin ligase complex SCF subunit scon-3 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=scon-3 PE=1 SV=1
Length = 171
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 7/104 (6%)
Query: 5 KKITLKSSDGEAFEVDEAVALESQTIKHMIED----DCADNGIPLPNVTSKILSKVIEYC 60
+K++L+S+DG+ VD VA S IK++IED + IPLPNV +L KV+E+C
Sbjct: 10 QKVSLQSNDGQIITVDRVVAERSLLIKNLIEDLGDEAVMNEAIPLPNVNEPVLRKVVEWC 69
Query: 61 KKHVE---ASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLIL 101
+ H + + D+ + ++ WD F++VDQ LF++IL
Sbjct: 70 EHHRKDPPQTTEDENDSRKKSTEIDEWDQKFMQVDQEMLFEIIL 113
>sp|A1CZG3|SKP1_NEOFI E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=sconC PE=3 SV=1
Length = 158
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 13/103 (12%)
Query: 7 ITLKSSDGEAFEVDEAVALESQTIKHMIED-DCADNGIPLPNVTSKILSKVIEYCKKHVE 65
+TL SSDG VD VA S IK+M+ED +D IP+PNV +L KVIE+C H
Sbjct: 4 VTLTSSDGVDITVDRDVAERSILIKNMLEDLGESDEAIPIPNVNEVVLKKVIEWCTHH-- 61
Query: 66 ASKSDDRATSGVDD-------DLKAWDTDFVKVDQATLFDLIL 101
+D ++G DD D+ WD F++VDQ LF++IL
Sbjct: 62 ---KNDPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIIL 101
>sp|Q4WTT8|SKP1_ASPFU E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=sconC PE=3 SV=1
Length = 158
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 13/103 (12%)
Query: 7 ITLKSSDGEAFEVDEAVALESQTIKHMIED-DCADNGIPLPNVTSKILSKVIEYCKKHVE 65
+TL SSDG VD VA S IK+M+ED +D IP+PNV +L KVIE+C H
Sbjct: 4 VTLTSSDGVDITVDRDVAERSILIKNMLEDLGESDEAIPIPNVNEVVLKKVIEWCTHH-- 61
Query: 66 ASKSDDRATSGVDD-------DLKAWDTDFVKVDQATLFDLIL 101
+D ++G DD D+ WD F++VDQ LF++IL
Sbjct: 62 ---KNDPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIIL 101
>sp|B0Y3B5|SKP1_ASPFC E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=sconC PE=3 SV=1
Length = 158
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 13/103 (12%)
Query: 7 ITLKSSDGEAFEVDEAVALESQTIKHMIED-DCADNGIPLPNVTSKILSKVIEYCKKHVE 65
+TL SSDG VD VA S IK+M+ED +D IP+PNV +L KVIE+C H
Sbjct: 4 VTLTSSDGVDITVDRDVAERSILIKNMLEDLGESDEAIPIPNVNEVVLKKVIEWCTHH-- 61
Query: 66 ASKSDDRATSGVDD-------DLKAWDTDFVKVDQATLFDLIL 101
+D ++G DD D+ WD F++VDQ LF++IL
Sbjct: 62 ---KNDPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIIL 101
>sp|B8MDP8|SKP1_TALSN E3 ubiquitin ligase complex SCF subunit sconC OS=Talaromyces
stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 /
NRRL 1006) GN=sconC PE=3 SV=1
Length = 160
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 13/106 (12%)
Query: 4 SKKITLKSSDGEAFEVDEAVALESQTIKHMIED-DCADNGIPLPNVTSKILSKVIEYCKK 62
S ++TL+SSD V+ AVA S IK+++ED ++ +P+PNV +L KVIE+C
Sbjct: 2 SGQVTLQSSDQVNITVERAVAERSMLIKNLLEDLGESEEPVPIPNVNESVLKKVIEWCTH 61
Query: 63 HVEASKSDDRATSGVDDD-------LKAWDTDFVKVDQATLFDLIL 101
H +D T+G +DD + WD F++VDQ LF++IL
Sbjct: 62 H-----KNDPQTTGEEDDNRRRTTEIDEWDQKFMQVDQEMLFEIIL 102
>sp|A1C9U5|SKP1_ASPCL E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=sconC PE=3 SV=1
Length = 159
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 64/109 (58%), Gaps = 15/109 (13%)
Query: 1 MSTSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNG--IPLPNVTSKILSKVIE 58
MST+ +TL SSDG VD VA S IK+M+E D ++G IP+PNV +L KVIE
Sbjct: 1 MSTT--VTLTSSDGVDLTVDRDVAERSVLIKNMLE-DLGESGEAIPIPNVNEVVLKKVIE 57
Query: 59 YCKKHVEASKSDDRATSGVDD------DLKAWDTDFVKVDQATLFDLIL 101
+C H K+D +T DD D+ WD F++VDQ LF++IL
Sbjct: 58 WCTHH----KNDPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIIL 102
>sp|B6QGB9|SKP1_PENMQ E3 ubiquitin ligase complex SCF subunit sconC OS=Penicillium
marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333)
GN=sconC PE=3 SV=1
Length = 160
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 13/106 (12%)
Query: 4 SKKITLKSSDGEAFEVDEAVALESQTIKHMIED-DCADNGIPLPNVTSKILSKVIEYCKK 62
S ++TL+SSD V+ AVA S IK+++ED ++ +P+PNV +L KVIE+C
Sbjct: 2 SGQVTLQSSDSVDITVERAVAERSMLIKNLLEDLGESEEPVPIPNVNESVLKKVIEWCTH 61
Query: 63 HVEASKSDDRATSGVDDD-------LKAWDTDFVKVDQATLFDLIL 101
H +D ++G DDD + WD F++VDQ LF++IL
Sbjct: 62 H-----KNDPQSTGEDDDNRRRTTEIDEWDQKFMQVDQEMLFEIIL 102
>sp|Q5KU00|SKP1_ASPOR E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=sconC PE=3 SV=1
Length = 161
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 15/104 (14%)
Query: 7 ITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNG--IPLPNVTSKILSKVIEYCKKHV 64
+T SSDG V+ VA SQ IK+M+ED + G IP+PNV +L KVIE+C H
Sbjct: 6 LTFTSSDGVDIPVERDVAERSQLIKNMLED-LGETGEPIPIPNVNEAVLKKVIEWCTHH- 63
Query: 65 EASKSDDRATSGVDD-------DLKAWDTDFVKVDQATLFDLIL 101
+D ++G DD D+ WD F++VDQ LF++IL
Sbjct: 64 ----KNDPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIIL 103
>sp|B8NSJ0|SKP1_ASPFN E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus flavus
(strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722
/ SRRC 167) GN=sconC PE=3 SV=1
Length = 161
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 15/104 (14%)
Query: 7 ITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNG--IPLPNVTSKILSKVIEYCKKHV 64
+T SSDG V+ VA SQ IK+M+ED + G IP+PNV +L KVIE+C H
Sbjct: 6 LTFTSSDGVDIPVERDVAERSQLIKNMLED-LGETGEPIPIPNVNEAVLKKVIEWCTHH- 63
Query: 65 EASKSDDRATSGVDD-------DLKAWDTDFVKVDQATLFDLIL 101
+D ++G DD D+ WD F++VDQ LF++IL
Sbjct: 64 ----KNDPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIIL 103
>sp|Q5BAX8|SKP1_EMENI E3 ubiquitin ligase complex SCF subunit sconC OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=sconC PE=3 SV=2
Length = 161
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 11/104 (10%)
Query: 5 KKITLKSSDGEAFEVDEAVALESQTIKHMIED-DCADNGIPLPNVTSKILSKVIEYCKKH 63
K + + S+DG+ EV VA S IK+M+ED IP+PNV+ +LSKV+E+C H
Sbjct: 4 KMLVMTSNDGKNIEVPRDVAERSLLIKNMLEDLGDPTEPIPIPNVSENVLSKVLEWCAHH 63
Query: 64 ------VEASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLIL 101
R T+ D++ WD F++VDQ LF++IL
Sbjct: 64 RNDPPSSADDDDSRRKTT----DIEEWDQKFMQVDQEMLFEIIL 103
>sp|P52286|SKP1_YEAST Suppressor of kinetochore protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SKP1 PE=1 SV=2
Length = 194
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 45/141 (31%)
Query: 1 MSTSKKITLKSSDGEAFEVDEAVALESQTIKHMIED----DCADNG-------------- 42
M TS + L S +GE F VD+ +A S +K+ + D + +N
Sbjct: 1 MVTSN-VVLVSGEGERFTVDKKIAERSLLLKNYLNDMHDSNLQNNSDSESDSDSETNHKS 59
Query: 43 -----------------IPLPNVTSKILSKVIEYCKKHVEASKSDD-----RATSGVDDD 80
+P+PNV S +L KVIE+ + H +++ D+ R ++ VD
Sbjct: 60 KDNNNGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVD-- 117
Query: 81 LKAWDTDFVKVDQATLFDLIL 101
+WD +F+KVDQ L+++IL
Sbjct: 118 --SWDREFLKVDQEMLYEIIL 136
>sp|Q751F9|ELOC_ASHGO Elongin-C OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=ELC1 PE=3 SV=1
Length = 100
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 1 MSTSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCA---DNGIPLPNVTSKILSKVI 57
M+ + +TL SSDG++FEV A+ S T+ M++ A + + LP + S +L+KV+
Sbjct: 1 MTPTSHVTLVSSDGKSFEVPRERAMLSPTLAKMLDSSFAEAKEAKVTLPTIESSMLAKVV 60
Query: 58 EYCKKHVEASKSDD 71
EY + E DD
Sbjct: 61 EYLEYLEEYKHKDD 74
>sp|Q03071|ELOC_YEAST Elongin-C OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=ELC1 PE=1 SV=1
Length = 99
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 7 ITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADN--GIPLPNVTSKILSKVIEYCKKHV 64
+TL S D + +E+ + A+ S T+K MIE ++ I L S IL K +EY ++
Sbjct: 6 VTLVSKDDKEYEISRSAAMISPTLKAMIEGPFRESKGRIELKQFDSHILEKAVEYLNYNL 65
Query: 65 EAS 67
+ S
Sbjct: 66 KYS 68
>sp|A0MD28|RPOA_PRRSS Replicase polyprotein 1ab OS=Porcine reproductive and respiratory
syndrome virus (isolate Pig/United States/SD 01-08/2001)
PE=1 SV=2
Length = 3838
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 7 ITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEA 66
+ L +S+ VD + +E + +H + D G PL +V +KI ++V E C ++A
Sbjct: 892 VDLTTSNEALSAVDPSEFVELRRPRHSAQA-LIDRGGPLADVHAKIKNRVYEQC---LQA 947
Query: 67 SKSDDRATSGVDDDL-KAWDTDFVKVDQAT 95
+ RAT + L K WD +VD T
Sbjct: 948 CEPGSRATPATREWLDKMWD----RVDMKT 973
>sp|P83941|ELOC_RAT Transcription elongation factor B polypeptide 1 OS=Rattus
norvegicus GN=Tceb1 PE=1 SV=1
Length = 112
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 7 ITLKSSDGEAFEVDEAVALESQTIKHMIED-----DCADNGIPLPNVTSKILSKVIEYCK 61
+ L SSDG F V AL S TIK M+ + N + + S +LSKV Y
Sbjct: 19 VKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFT 78
Query: 62 KHVEASKS 69
V + S
Sbjct: 79 YKVRYTNS 86
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.129 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,036,088
Number of Sequences: 539616
Number of extensions: 1184449
Number of successful extensions: 3344
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 3224
Number of HSP's gapped (non-prelim): 68
length of query: 101
length of database: 191,569,459
effective HSP length: 70
effective length of query: 31
effective length of database: 153,796,339
effective search space: 4767686509
effective search space used: 4767686509
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)