Query 035736
Match_columns 101
No_of_seqs 125 out of 788
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 09:37:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035736.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035736hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v7d_A Suppressor of kinetocho 100.0 1E-32 3.5E-37 187.7 8.7 100 1-101 4-111 (169)
2 1fs1_B SKP1, cyclin A/CDK2-ass 100.0 1.8E-30 6.2E-35 171.9 7.4 95 6-101 3-99 (141)
3 1hv2_A Elongin C, ELC1; protei 100.0 4.2E-30 1.4E-34 161.4 5.9 90 1-101 1-92 (99)
4 2p1m_A SKP1-like protein 1A; F 100.0 6.9E-31 2.4E-35 177.1 -0.9 100 1-101 1-103 (160)
5 1vcb_B Protein (elongin C); tu 99.9 2.6E-28 9E-33 156.3 7.0 85 4-101 16-105 (112)
6 2fnj_C Transcription elongatio 99.9 3.6E-28 1.2E-32 151.7 6.4 84 5-101 1-89 (96)
7 2ast_A S-phase kinase-associat 99.9 3.1E-27 1.1E-31 158.8 9.7 96 6-101 2-104 (159)
8 4ajy_C Transcription elongatio 99.9 6.6E-26 2.3E-30 141.4 7.6 83 6-101 3-90 (97)
9 2vkp_A BTB/POZ domain-containi 97.4 0.00061 2.1E-08 41.3 6.4 59 6-64 10-74 (109)
10 3ga1_A Nucleus accumbens-assoc 97.3 0.0011 3.9E-08 41.6 7.2 57 6-64 35-93 (129)
11 3b84_A Zinc finger and BTB dom 97.3 0.00091 3.1E-08 41.5 6.5 57 6-64 26-83 (119)
12 2vpk_A Myoneurin; transcriptio 97.2 0.0023 7.8E-08 39.3 7.3 56 6-63 24-82 (116)
13 2if5_A Zinc finger and BTB dom 97.2 0.002 6.8E-08 39.8 7.0 58 6-64 27-88 (120)
14 2yy9_A Zinc finger and BTB dom 97.1 0.00078 2.7E-08 42.8 5.1 57 6-64 27-84 (135)
15 1buo_A POZ domain, protein (pr 97.1 0.0021 7.3E-08 39.9 6.7 56 6-64 30-86 (121)
16 3htm_A Speckle-type POZ protei 97.1 0.0022 7.6E-08 41.6 7.0 59 6-65 36-98 (172)
17 3fkc_A Transcriptional regulat 97.1 0.0018 6E-08 40.2 6.1 55 6-63 33-88 (116)
18 2ppi_A Gigaxonin; BTB domain, 97.0 0.0026 8.9E-08 40.9 7.0 57 6-63 49-111 (144)
19 1r29_A B-cell lymphoma 6 prote 97.0 0.0035 1.2E-07 39.1 7.1 58 6-64 31-92 (127)
20 3ohu_A Transcription regulator 97.0 0.0035 1.2E-07 39.0 6.9 57 6-63 34-93 (125)
21 4eoz_A Speckle-type POZ protei 96.9 0.0022 7.4E-08 40.5 5.6 59 6-65 27-89 (145)
22 2q81_A MIZ-1 protein; BTB/POZ 96.8 0.0048 1.6E-07 38.2 6.7 56 6-64 29-85 (119)
23 2ihc_A Transcription regulator 96.1 0.023 7.9E-07 35.2 6.5 58 6-64 31-91 (124)
24 2z8h_A Transcription regulator 96.0 0.029 9.9E-07 35.4 6.7 58 6-64 38-98 (138)
25 3hqi_A Speckle-type POZ protei 95.8 0.023 7.8E-07 40.4 6.2 57 6-63 176-236 (312)
26 3hve_A Gigaxonin; ubiquitin, c 95.8 0.014 4.6E-07 40.5 4.8 58 6-64 33-96 (256)
27 3i3n_A Kelch-like protein 11; 95.6 0.0096 3.3E-07 41.8 3.5 59 6-64 34-104 (279)
28 3m5b_A Zinc finger and BTB dom 93.1 0.034 1.2E-06 34.5 1.5 50 7-63 33-83 (119)
29 1xb4_A VPS25, hypothetical 23. 51.6 6.4 0.00022 26.8 1.6 15 54-68 32-46 (202)
30 2xuv_A HDEB, 10K-L protein; un 50.6 20 0.00068 20.7 3.4 28 40-67 38-65 (79)
31 3cuq_C Vacuolar protein-sortin 46.7 8.4 0.00029 25.7 1.5 14 54-67 35-48 (176)
32 1got_G GT-gamma; complex (GTP- 46.5 13 0.00045 21.2 2.2 24 41-68 36-59 (73)
33 2ra2_A Putative lipoprotein; X 36.3 26 0.0009 19.5 2.3 18 1-19 1-18 (64)
34 2pjh_A Protein NPL4, nuclear p 33.8 21 0.00072 20.2 1.7 19 1-20 1-19 (80)
35 3phx_B Ubiquitin-like protein 32.8 34 0.0012 18.5 2.5 22 1-22 1-22 (79)
36 3v5w_G G gamma-I, guanine nucl 32.5 40 0.0014 19.4 2.7 24 41-68 32-55 (77)
37 2rb6_A Uncharacterized protein 27.3 62 0.0021 17.8 2.8 14 6-19 4-17 (61)
38 2blf_B SORB, sulfite\:cytochro 24.5 97 0.0033 17.1 4.4 16 48-63 65-80 (81)
39 3kdf_A Replication protein A 1 24.4 68 0.0023 19.7 3.0 64 4-68 38-114 (121)
40 2pi2_E Replication protein A 1 22.7 74 0.0025 20.2 3.0 63 3-66 58-133 (142)
41 3gox_A Restriction endonucleas 22.6 55 0.0019 22.2 2.4 17 48-64 183-199 (200)
42 2k57_A Putative lipoprotein; s 21.4 92 0.0031 17.0 2.8 14 6-19 4-17 (61)
43 2hj8_A Interferon-induced 17 k 21.2 62 0.0021 18.0 2.2 21 1-21 1-21 (88)
44 1igq_A Transcriptional repress 20.9 94 0.0032 17.1 2.7 20 3-22 32-52 (62)
45 1dj8_A HDEA, protein HNS-depen 20.4 62 0.0021 19.0 2.1 23 42-65 49-71 (89)
No 1
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=99.98 E-value=1e-32 Score=187.67 Aligned_cols=100 Identities=36% Similarity=0.636 Sum_probs=81.3
Q ss_pred CCCCceEEEEcCCCCeEEecHHHHHHhHHHHHHHhhCCC-----C--CCcccCCCCHHHHHHHHHHHHhhcccCCCcc-c
Q 035736 1 MSTSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCA-----D--NGIPLPNVTSKILSKVIEYCKKHVEASKSDD-R 72 (101)
Q Consensus 1 m~~~~~v~L~S~DG~~f~v~~~~a~~S~~i~~~l~~~~~-----~--~~Ipl~~v~~~~L~kIiewc~~h~~~~~~~~-~ 72 (101)
|| +++|+|+|+||++|.|++++|++|+||++||++.+. + .+||||+|+|.+|+|||+||+||++++++.. .
T Consensus 4 m~-~~~i~L~SsDG~~F~V~~~vA~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~ 82 (169)
T 3v7d_A 4 MV-TSNVVLVSGEGERFTVDKKIAERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDD 82 (169)
T ss_dssp ---CCEEEEECTTCCEEEEEHHHHTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC---
T ss_pred CC-CCeEEEEeCCCCEEEecHHHHHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCccccc
Confidence 77 489999999999999999999999999999997654 3 6899999999999999999999999875331 1
Q ss_pred cCCCCCCCcChhhhhhhccChhhhhhhhC
Q 035736 73 ATSGVDDDLKAWDTDFVKVDQATLFDLIL 101 (101)
Q Consensus 73 ~~~~~~~~~~~WD~~Fl~~~~~~Lf~li~ 101 (101)
........+++||++|++++++.||+||+
T Consensus 83 ~~~~~~~~i~~wD~~Fl~vd~~~LfeLi~ 111 (169)
T 3v7d_A 83 DDSRKSAPVDSWDREFLKVDQEMLYEIIL 111 (169)
T ss_dssp -----CCCCCHHHHHHTCSCHHHHHHHHH
T ss_pred ccccccccccHHHHHHHcCCHHHHHHHHH
Confidence 22235678999999999999999999984
No 2
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.96 E-value=1.8e-30 Score=171.90 Aligned_cols=95 Identities=49% Similarity=0.797 Sum_probs=76.3
Q ss_pred eEEEEcCCCCeEEecHHHHHHhHHHHHHHhhCCCCCCcccCCCCHHHHHHHHHHHHhhcccCCCc-ccc-CCCCCCCcCh
Q 035736 6 KITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSD-DRA-TSGVDDDLKA 83 (101)
Q Consensus 6 ~v~L~S~DG~~f~v~~~~a~~S~~i~~~l~~~~~~~~Ipl~~v~~~~L~kIiewc~~h~~~~~~~-~~~-~~~~~~~~~~ 83 (101)
.|+|+|+||++|.|++++|++|++|++|+++.+ +++||||+|++.+|+|||+||+||++++++. +.+ .......+++
T Consensus 3 ~v~L~SsDg~~f~v~~~vA~~S~~ik~ml~~~~-~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~ 81 (141)
T 1fs1_B 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLG-MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPV 81 (141)
T ss_dssp EEEEECTTSCEEEEEGGGGGTCHHHHHHHHHTC-CSSEECTTCCHHHHHHHHHHHHHHTTCC-----------------H
T ss_pred eEEEEeCCCCEEEecHHHHHHhHHHHHHHHhcC-CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhhhhH
Confidence 599999999999999999999999999999876 7799999999999999999999999887532 221 2234678999
Q ss_pred hhhhhhccChhhhhhhhC
Q 035736 84 WDTDFVKVDQATLFDLIL 101 (101)
Q Consensus 84 WD~~Fl~~~~~~Lf~li~ 101 (101)
||++|++++++.||+||+
T Consensus 82 wD~~F~~vd~~~l~eLi~ 99 (141)
T 1fs1_B 82 WDQEFLKVDQGTLFELIL 99 (141)
T ss_dssp HHHHHTCSCHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHH
Confidence 999999999999999973
No 3
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=99.96 E-value=4.2e-30 Score=161.40 Aligned_cols=90 Identities=30% Similarity=0.456 Sum_probs=77.6
Q ss_pred CCCCceEEEEcCCCCeEEecHHHHHHhHHHHHHHhhCCC--CCCcccCCCCHHHHHHHHHHHHhhcccCCCccccCCCCC
Q 035736 1 MSTSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCA--DNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGVD 78 (101)
Q Consensus 1 m~~~~~v~L~S~DG~~f~v~~~~a~~S~~i~~~l~~~~~--~~~Ipl~~v~~~~L~kIiewc~~h~~~~~~~~~~~~~~~ 78 (101)
|+ +++|+|+|+||++|.|++++|++|++|++|+++... +++||||||+|.+|+|||+||+||++++++. ...
T Consensus 1 m~-~~~v~L~SsDg~~f~V~~~vA~~S~~ik~ml~~~~e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~-----~~~ 74 (99)
T 1hv2_A 1 MS-QDFVTLVSKDDKEYEISRSAAMISPTLKAMIEGPFRESKGRIELKQFDSHILEKAVEYLNYNLKYSGVS-----EDD 74 (99)
T ss_dssp CC-CSEEEEEETTTEEEEEEHHHHTTCHHHHHHHHSSTTTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHC-----SSC
T ss_pred CC-CcEEEEEecCCCEEEECHHHHHHhHHHHHHHhcccccCCCceecCCcCHHHHHHHHHHHHHhcccCCCc-----ccc
Confidence 77 589999999999999999999999999999998432 3689999999999999999999999875422 124
Q ss_pred CCcChhhhhhhccChhhhhhhhC
Q 035736 79 DDLKAWDTDFVKVDQATLFDLIL 101 (101)
Q Consensus 79 ~~~~~WD~~Fl~~~~~~Lf~li~ 101 (101)
..+++| +++++.||+||+
T Consensus 75 ~~i~~w-----~vd~~~lfeLi~ 92 (99)
T 1hv2_A 75 DEIPEF-----EIPTEMSLELLL 92 (99)
T ss_dssp SSCCCC-----CCCHHHHHHHHH
T ss_pred ccCCCc-----cCCHHHHHHHHH
Confidence 678889 799999999984
No 4
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=99.96 E-value=6.9e-31 Score=177.07 Aligned_cols=100 Identities=77% Similarity=1.177 Sum_probs=32.0
Q ss_pred CCCCceEEEEcCCCCeEEecHHHHHHhHHHHHHHhhCCCCCCcccCCCCHHHHHHHHHHHHhhcccCCCcccc---CCCC
Q 035736 1 MSTSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRA---TSGV 77 (101)
Q Consensus 1 m~~~~~v~L~S~DG~~f~v~~~~a~~S~~i~~~l~~~~~~~~Ipl~~v~~~~L~kIiewc~~h~~~~~~~~~~---~~~~ 77 (101)
|+ +++|+|+|+||++|.|++++|++|++|++|+++.+.+++||||+|++.+|+|||+||+||++++++.+.+ ....
T Consensus 1 ~~-~~~v~L~SsDg~~f~v~~~vA~~S~~ik~ml~~~~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~ 79 (160)
T 2p1m_A 1 MS-AKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATS 79 (160)
T ss_dssp --------CCC---------CHHHHTCTTTC------------CCTTSCHHHHHHHHHC---------------------
T ss_pred CC-CCEEEEEcCCCCEEEECHHHHHHhHHHHHHHHccCCCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccc
Confidence 55 5789999999999999999999999999999987767799999999999999999999999886533221 1235
Q ss_pred CCCcChhhhhhhccChhhhhhhhC
Q 035736 78 DDDLKAWDTDFVKVDQATLFDLIL 101 (101)
Q Consensus 78 ~~~~~~WD~~Fl~~~~~~Lf~li~ 101 (101)
...+++||++|++++++.||+||+
T Consensus 80 ~~~i~~wD~~Fl~vd~~~l~eLi~ 103 (160)
T 2p1m_A 80 DDDLKAWDADFMKIDQATLFELIL 103 (160)
T ss_dssp ---------------------CHH
T ss_pred cchhhHHHHHHHcCCHHHHHHHHH
Confidence 678999999999999999999973
No 5
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=99.95 E-value=2.6e-28 Score=156.31 Aligned_cols=85 Identities=27% Similarity=0.410 Sum_probs=73.4
Q ss_pred CceEEEEcCCCCeEEecHHHHHHhHHHHHHHhhCCC-----CCCcccCCCCHHHHHHHHHHHHhhcccCCCccccCCCCC
Q 035736 4 SKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCA-----DNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGVD 78 (101)
Q Consensus 4 ~~~v~L~S~DG~~f~v~~~~a~~S~~i~~~l~~~~~-----~~~Ipl~~v~~~~L~kIiewc~~h~~~~~~~~~~~~~~~ 78 (101)
+++|+|+|+||++|.|++++|++|+||++||++.+. +++||||+|++.+|+|||+||+||++++. ..
T Consensus 16 ~~~v~L~SsDG~~F~V~~~~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~--------~~ 87 (112)
T 1vcb_B 16 AMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTN--------SS 87 (112)
T ss_dssp -CEEEEECTTSCEEEEEHHHHHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSS--------CS
T ss_pred CCEEEEEcCCCCEEEECHHHHHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccC--------Cc
Confidence 579999999999999999999999999999997643 25899999999999999999999998753 24
Q ss_pred CCcChhhhhhhccChhhhhhhhC
Q 035736 79 DDLKAWDTDFVKVDQATLFDLIL 101 (101)
Q Consensus 79 ~~~~~WD~~Fl~~~~~~Lf~li~ 101 (101)
..+++| +++++.||+||+
T Consensus 88 ~~i~~w-----~vd~~~lfeLi~ 105 (112)
T 1vcb_B 88 TEIPEF-----PIAPEIALELLM 105 (112)
T ss_dssp SCCCCC-----CCCHHHHHHHHH
T ss_pred CCCCCc-----ccCHHHHHHHHH
Confidence 567888 799999999984
No 6
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=99.95 E-value=3.6e-28 Score=151.74 Aligned_cols=84 Identities=27% Similarity=0.411 Sum_probs=72.7
Q ss_pred ceEEEEcCCCCeEEecHHHHHHhHHHHHHHhhCCC-----CCCcccCCCCHHHHHHHHHHHHhhcccCCCccccCCCCCC
Q 035736 5 KKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCA-----DNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGVDD 79 (101)
Q Consensus 5 ~~v~L~S~DG~~f~v~~~~a~~S~~i~~~l~~~~~-----~~~Ipl~~v~~~~L~kIiewc~~h~~~~~~~~~~~~~~~~ 79 (101)
.+|+|+|+||++|.|++++|++|++|++|+++.|. +++||||+|++.+|+|||+||+||++++. ...
T Consensus 1 ~~v~L~SsDg~~f~V~~~~A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~--------~~~ 72 (96)
T 2fnj_C 1 MYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTN--------SST 72 (96)
T ss_dssp CEEEEECTTSCEEEEEHHHHTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHS--------CCS
T ss_pred CeEEEEecCCCEEEeCHHHHHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCC--------Ccc
Confidence 37999999999999999999999999999998543 25899999999999999999999998643 145
Q ss_pred CcChhhhhhhccChhhhhhhhC
Q 035736 80 DLKAWDTDFVKVDQATLFDLIL 101 (101)
Q Consensus 80 ~~~~WD~~Fl~~~~~~Lf~li~ 101 (101)
.+++| +++++.||+||+
T Consensus 73 ~i~~w-----~vd~~~l~eLi~ 89 (96)
T 2fnj_C 73 EIPEF-----PIAPEIALELLM 89 (96)
T ss_dssp CCCCC-----CCCTTTHHHHHH
T ss_pred cCCCc-----ccCHHHHHHHHH
Confidence 67888 799999999984
No 7
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.94 E-value=3.1e-27 Score=158.84 Aligned_cols=96 Identities=50% Similarity=0.814 Sum_probs=78.9
Q ss_pred eEEEEcCCCCeEEecHHHHHHhHHHHHHHhhCC-C----CCCcccCCCCHHHHHHHHHHHHhhcccCCCc-ccc-CCCCC
Q 035736 6 KITLKSSDGEAFEVDEAVALESQTIKHMIEDDC-A----DNGIPLPNVTSKILSKVIEYCKKHVEASKSD-DRA-TSGVD 78 (101)
Q Consensus 6 ~v~L~S~DG~~f~v~~~~a~~S~~i~~~l~~~~-~----~~~Ipl~~v~~~~L~kIiewc~~h~~~~~~~-~~~-~~~~~ 78 (101)
.|+|+|+||++|.|++.+|++|++|++|+++.+ . ..+||||+|++.+|++||+||+||++++++. +.+ .....
T Consensus 2 ~v~L~ssDg~~f~v~~~vA~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~ 81 (159)
T 2ast_A 2 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 81 (159)
T ss_dssp EEEEECTTSCEEEEEHHHHHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------C
T ss_pred eEEEEcCCCCEEEeCHHHHHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccch
Confidence 499999999999999999999999999999743 2 2689999999999999999999999887532 221 12346
Q ss_pred CCcChhhhhhhccChhhhhhhhC
Q 035736 79 DDLKAWDTDFVKVDQATLFDLIL 101 (101)
Q Consensus 79 ~~~~~WD~~Fl~~~~~~Lf~li~ 101 (101)
..+++||++|++++++.||+||.
T Consensus 82 ~~i~~wD~~F~~id~~~l~eLl~ 104 (159)
T 2ast_A 82 DDIPVWDQEFLKVDQGTLFELIL 104 (159)
T ss_dssp CCCCHHHHHHTCSCHHHHHHHHH
T ss_pred hhhhHHHHHHHcCCHHHHHHHHH
Confidence 78999999999999999999973
No 8
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.93 E-value=6.6e-26 Score=141.43 Aligned_cols=83 Identities=28% Similarity=0.421 Sum_probs=72.3
Q ss_pred eEEEEcCCCCeEEecHHHHHHhHHHHHHHhhCCC-----CCCcccCCCCHHHHHHHHHHHHhhcccCCCccccCCCCCCC
Q 035736 6 KITLKSSDGEAFEVDEAVALESQTIKHMIEDDCA-----DNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGVDDD 80 (101)
Q Consensus 6 ~v~L~S~DG~~f~v~~~~a~~S~~i~~~l~~~~~-----~~~Ipl~~v~~~~L~kIiewc~~h~~~~~~~~~~~~~~~~~ 80 (101)
+|+|+|+||++|.|++.+|++|++|++|+++.+. +++||||+|++.+|+|||+||+||++++. ....
T Consensus 3 ~v~L~SsDg~~F~v~r~vA~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~--------~~~~ 74 (97)
T 4ajy_C 3 YVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTN--------SSTE 74 (97)
T ss_dssp EEEEECTTCCEEEEEHHHHTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTT--------CCSC
T ss_pred EEEEEecCCcEEEecHHHHHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCC--------CcCC
Confidence 7999999999999999999999999999997543 56899999999999999999999998753 2457
Q ss_pred cChhhhhhhccChhhhhhhhC
Q 035736 81 LKAWDTDFVKVDQATLFDLIL 101 (101)
Q Consensus 81 ~~~WD~~Fl~~~~~~Lf~li~ 101 (101)
+++| +++++.||+||+
T Consensus 75 i~~~-----~i~~~~l~eLl~ 90 (97)
T 4ajy_C 75 IPEF-----PIAPEIALELLM 90 (97)
T ss_dssp CCCC-----CCCGGGHHHHHH
T ss_pred CCcC-----cCCHHHHHHHHH
Confidence 8899 589999999973
No 9
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=97.39 E-value=0.00061 Score=41.33 Aligned_cols=59 Identities=15% Similarity=0.219 Sum_probs=47.8
Q ss_pred eEEEEcCCC---CeEEecHHHH-HHhHHHHHHHhhCCC--CCCcccCCCCHHHHHHHHHHHHhhc
Q 035736 6 KITLKSSDG---EAFEVDEAVA-LESQTIKHMIEDDCA--DNGIPLPNVTSKILSKVIEYCKKHV 64 (101)
Q Consensus 6 ~v~L~S~DG---~~f~v~~~~a-~~S~~i~~~l~~~~~--~~~Ipl~~v~~~~L~kIiewc~~h~ 64 (101)
-++|+..+| +.|.+.+.+. ..|..+++|+..... ...|.|+++++.+++.+++|++.-.
T Consensus 10 Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~~~i~l~~~~~~~f~~~l~~iYt~~ 74 (109)
T 2vkp_A 10 DVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVKSEIHIPDVEPAAFLILLKYMYSDE 74 (109)
T ss_dssp CEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------CCEEEETTSCHHHHHHHHHHHHHCC
T ss_pred cEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCCCeEEeCCCCHHHHHHHHHHHcCCC
Confidence 478888876 9999999995 589999999976421 2679999999999999999998753
No 10
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=97.31 E-value=0.0011 Score=41.57 Aligned_cols=57 Identities=18% Similarity=0.431 Sum_probs=48.1
Q ss_pred eEEEEcCCCCeEEecHHHHH-HhHHHHHHHhhCCCCCCcccC-CCCHHHHHHHHHHHHhhc
Q 035736 6 KITLKSSDGEAFEVDEAVAL-ESQTIKHMIEDDCADNGIPLP-NVTSKILSKVIEYCKKHV 64 (101)
Q Consensus 6 ~v~L~S~DG~~f~v~~~~a~-~S~~i~~~l~~~~~~~~Ipl~-~v~~~~L~kIiewc~~h~ 64 (101)
-++|+. +|+.|.+.+.+.. +|..++.|+... ....|.|| ++++.+++.+++|++.-.
T Consensus 35 Dv~l~v-~~~~~~~Hk~vLaa~S~~F~~~f~~~-~~~~i~l~~~~~~~~f~~ll~~iYtg~ 93 (129)
T 3ga1_A 35 DVSVVV-KGHAFKAHRAVLAASSSYFRDLFNNS-RSAVVELPAAVQPQSFQQILSFCYTGR 93 (129)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHBHHHHHHHHHC-CCSEEECCTTCCHHHHHHHHHHHHHSE
T ss_pred ceEEEE-CCEEEEehHHHHHHcCHHHHHHHcCC-CCCEEEECCCCCHHHHHHHHHHHhCCc
Confidence 366665 7999999999955 799999999876 46789998 899999999999998654
No 11
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=97.28 E-value=0.00091 Score=41.54 Aligned_cols=57 Identities=18% Similarity=0.255 Sum_probs=47.5
Q ss_pred eEEEEcCCCCeEEecHHHH-HHhHHHHHHHhhCCCCCCcccCCCCHHHHHHHHHHHHhhc
Q 035736 6 KITLKSSDGEAFEVDEAVA-LESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHV 64 (101)
Q Consensus 6 ~v~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~~~~Ipl~~v~~~~L~kIiewc~~h~ 64 (101)
-++|+. +|+.|.+.+.+. ..|..++.|+.... ...|.|+++++.+++.+++|++.-.
T Consensus 26 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~-~~~i~l~~~~~~~f~~ll~~iYtg~ 83 (119)
T 3b84_A 26 DATLDV-GGLVFKAHWSVLACCSHFFQSLYGDGS-GGSVVLPAGFAEIFGLLLDFFYTGH 83 (119)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTTT-CCCEEECGGGHHHHHHHHHHHHHSC
T ss_pred ceEEEE-CCEEEEeeHHHHhhcCHHHHHHHCCCC-CCeEEeCCCCHHHHHHHHHHHcCCC
Confidence 356664 689999999984 57999999998654 6789999999999999999998653
No 12
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=97.16 E-value=0.0023 Score=39.31 Aligned_cols=56 Identities=16% Similarity=0.182 Sum_probs=45.6
Q ss_pred eEEEEcCCCCeEEecHHHH-HHhHHHHHHHhhCCCCCCcccC--CCCHHHHHHHHHHHHhh
Q 035736 6 KITLKSSDGEAFEVDEAVA-LESQTIKHMIEDDCADNGIPLP--NVTSKILSKVIEYCKKH 63 (101)
Q Consensus 6 ~v~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~~~~Ipl~--~v~~~~L~kIiewc~~h 63 (101)
-|+|+. +|+.|.+.+.+. ..|..++.|+.... ...|.|+ ++++.+++.+++|++.-
T Consensus 24 Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~~-~~~i~l~~~~~~~~~f~~ll~~~Yt~ 82 (116)
T 2vpk_A 24 DCTIVI-GEFQFKAHRNVLASFSEYFGAIYRSTS-ENNVFLDQSQVKADGFQKLLEFIYTG 82 (116)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCC-CSCEECCTTTCCHHHHHHHHHHHHHS
T ss_pred cEEEEE-CCEEEeccHHHHhhcCHHHHHHHcCCC-CCeEEeecCCCCHHHHHHHHHHHcCC
Confidence 356655 589999999995 67999999998763 4556665 99999999999999865
No 13
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=97.15 E-value=0.002 Score=39.78 Aligned_cols=58 Identities=16% Similarity=0.302 Sum_probs=46.5
Q ss_pred eEEEEcCCCCeEEecHHHHH-HhHHHHHHHhhCC---CCCCcccCCCCHHHHHHHHHHHHhhc
Q 035736 6 KITLKSSDGEAFEVDEAVAL-ESQTIKHMIEDDC---ADNGIPLPNVTSKILSKVIEYCKKHV 64 (101)
Q Consensus 6 ~v~L~S~DG~~f~v~~~~a~-~S~~i~~~l~~~~---~~~~Ipl~~v~~~~L~kIiewc~~h~ 64 (101)
-|+++. +|+.|.+.+.+.. .|..++.|+.+.. ....|.|+++++.+++.+++|++.-.
T Consensus 27 Dv~l~v-~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~~~Yt~~ 88 (120)
T 2if5_A 27 DVVILV-EGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMDFAYTAT 88 (120)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHHHHHHSC
T ss_pred CeEEEE-CCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHHHHcCCC
Confidence 366665 6899999999954 7999999998642 24678999999999999999998643
No 14
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=97.14 E-value=0.00078 Score=42.84 Aligned_cols=57 Identities=19% Similarity=0.276 Sum_probs=45.6
Q ss_pred eEEEEcCCCCeEEecHHH-HHHhHHHHHHHhhCCCCCCcccCCCCHHHHHHHHHHHHhhc
Q 035736 6 KITLKSSDGEAFEVDEAV-ALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHV 64 (101)
Q Consensus 6 ~v~L~S~DG~~f~v~~~~-a~~S~~i~~~l~~~~~~~~Ipl~~v~~~~L~kIiewc~~h~ 64 (101)
-|+|+. +|+.|.+.+.+ |..|..++.|+.... ...|.|++++..+++.+++|++..+
T Consensus 27 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~-~~~i~l~~~~~~~f~~lL~fiYtg~ 84 (135)
T 2yy9_A 27 DATLDV-GGLVFKAHWSVLACCSHFFQRIYGDGT-GGSVVLPAGFAEIFGLLLDFFYTGH 84 (135)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHTCC-----CCEEECGGGHHHHHHHHHHHHHSC
T ss_pred ceEEEE-CCEEEehHHHHHHHhCHHHHHHHcCCC-CCeEEeCCCCHHHHHHHHHHHhCCC
Confidence 366664 68999999998 557999999997643 5679999999999999999998754
No 15
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=97.09 E-value=0.0021 Score=39.87 Aligned_cols=56 Identities=16% Similarity=0.344 Sum_probs=46.9
Q ss_pred eEEEEcCCCCeEEecHHH-HHHhHHHHHHHhhCCCCCCcccCCCCHHHHHHHHHHHHhhc
Q 035736 6 KITLKSSDGEAFEVDEAV-ALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHV 64 (101)
Q Consensus 6 ~v~L~S~DG~~f~v~~~~-a~~S~~i~~~l~~~~~~~~Ipl~~v~~~~L~kIiewc~~h~ 64 (101)
-|+|+. +|+.|.+.+.+ +..|..++.|+... ...|.|+++++.+++.+++|++.-.
T Consensus 30 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~--~~~i~l~~~~~~~f~~ll~~~Ytg~ 86 (121)
T 1buo_A 30 DVVIMV-DSQEFHAHRTVLACTSKMFEILFHRN--SQHYTLDFLSPKTFQQILEYAYTAT 86 (121)
T ss_dssp CEEEEE-SSCEEEECHHHHHHHCHHHHHHTTSC--CSEEEECSSCHHHHHHHHHHHHHSC
T ss_pred CEEEEE-CCEEEehhHHHHhhcCHHHHHHHcCC--CcEEEeCCCCHHHHHHHHHhhcCCC
Confidence 366665 68999999999 46899999999753 4678999999999999999998653
No 16
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=97.08 E-value=0.0022 Score=41.63 Aligned_cols=59 Identities=15% Similarity=0.316 Sum_probs=48.3
Q ss_pred eEEEEcCCCCeEEecHHHH-HHhHHHHHHHhhCCC---CCCcccCCCCHHHHHHHHHHHHhhcc
Q 035736 6 KITLKSSDGEAFEVDEAVA-LESQTIKHMIEDDCA---DNGIPLPNVTSKILSKVIEYCKKHVE 65 (101)
Q Consensus 6 ~v~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~---~~~Ipl~~v~~~~L~kIiewc~~h~~ 65 (101)
-|+|+. +|+.|.+.+.+. .+|..++.|+..... ...|.|+++++.+++.+++|++...-
T Consensus 36 Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~~~Yt~~~ 98 (172)
T 3htm_A 36 DCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKA 98 (172)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHHHHHHSCC
T ss_pred ceEEEE-CCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHHHHhCCCC
Confidence 366665 689999999995 679999999986422 46899999999999999999986543
No 17
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=97.06 E-value=0.0018 Score=40.18 Aligned_cols=55 Identities=11% Similarity=0.289 Sum_probs=46.0
Q ss_pred eEEEEcCCCCeEEecHHHH-HHhHHHHHHHhhCCCCCCcccCCCCHHHHHHHHHHHHhh
Q 035736 6 KITLKSSDGEAFEVDEAVA-LESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKH 63 (101)
Q Consensus 6 ~v~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~~~~Ipl~~v~~~~L~kIiewc~~h 63 (101)
-++|+. +|+.|.+.+.+. .+|..++.|+... ...|.++++++.+++.+++|++--
T Consensus 33 Dv~l~v-~~~~f~aHk~vLaa~S~~F~~~f~~~--~~~i~l~~~~~~~f~~~l~~~Ytg 88 (116)
T 3fkc_A 33 DVTVIV-EDRKFRAHKNILSASSTYFHQLFSVA--GQVVELSFIRAEIFAEILNYIYSS 88 (116)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHTTSC--CSEEEECSSCHHHHHHHHHHHTTS
T ss_pred eEEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC--CCEEEeCCCCHHHHHHHHHhhcCC
Confidence 356664 689999999995 6799999999764 467999999999999999998753
No 18
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=97.05 E-value=0.0026 Score=40.90 Aligned_cols=57 Identities=18% Similarity=0.304 Sum_probs=46.6
Q ss_pred eEEEEcCCCCeEEecHHHHH-HhHHHHHHHhhCC-----CCCCcccCCCCHHHHHHHHHHHHhh
Q 035736 6 KITLKSSDGEAFEVDEAVAL-ESQTIKHMIEDDC-----ADNGIPLPNVTSKILSKVIEYCKKH 63 (101)
Q Consensus 6 ~v~L~S~DG~~f~v~~~~a~-~S~~i~~~l~~~~-----~~~~Ipl~~v~~~~L~kIiewc~~h 63 (101)
-|+|+. +|+.|.+.+.+.. .|..++.|+.... ....|.|+++++.+++.+++|++--
T Consensus 49 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiYtg 111 (144)
T 2ppi_A 49 DAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSG 111 (144)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHTTS
T ss_pred ceEEEE-CCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHhCC
Confidence 356665 6899999999954 7999999998642 2457999999999999999998743
No 19
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=96.99 E-value=0.0035 Score=39.05 Aligned_cols=58 Identities=14% Similarity=0.220 Sum_probs=47.4
Q ss_pred eEEEEcCCCCeEEecHHHH-HHhHHHHHHHhhCCC--CCCccc-CCCCHHHHHHHHHHHHhhc
Q 035736 6 KITLKSSDGEAFEVDEAVA-LESQTIKHMIEDDCA--DNGIPL-PNVTSKILSKVIEYCKKHV 64 (101)
Q Consensus 6 ~v~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~--~~~Ipl-~~v~~~~L~kIiewc~~h~ 64 (101)
-|+|+. +|+.|.+.+.+. ..|..++.|+..... ...|.| +++++.+++.+++|++.-.
T Consensus 31 Dv~l~v-~~~~~~aHk~iLaa~S~~F~~~f~~~~~e~~~~i~l~~~~~~~~f~~ll~~~Ytg~ 92 (127)
T 1r29_A 31 DVVIVV-SREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFNILLDFMYTSR 92 (127)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHTSTTTTTCSEEECCTTSCHHHHHHHHHHHHHSC
T ss_pred CEEEEE-CCEEEehHHHHHHHhCHHHHHHhcCCccCCCCEEEeCCCCCHHHHHHHHHHHcCCC
Confidence 366665 589999999995 679999999986432 467889 8999999999999997643
No 20
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=96.96 E-value=0.0035 Score=38.96 Aligned_cols=57 Identities=19% Similarity=0.295 Sum_probs=46.7
Q ss_pred eEEEEcCCCCeEEecHHHH-HHhHHHHHHHhhCCC-CCCcccCC-CCHHHHHHHHHHHHhh
Q 035736 6 KITLKSSDGEAFEVDEAVA-LESQTIKHMIEDDCA-DNGIPLPN-VTSKILSKVIEYCKKH 63 (101)
Q Consensus 6 ~v~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~-~~~Ipl~~-v~~~~L~kIiewc~~h 63 (101)
-|+|+. +|+.|.+.+.+. ..|..++.|+..... ...|.+++ ++..+++.+++|++.-
T Consensus 34 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~~~i~l~~~~~~~~f~~~l~~iYtg 93 (125)
T 3ohu_A 34 DVTLIV-ERKEFRAHRAVLAACSEYFWQALVGQTKNDLVVSLPEEVTARGFGPLLQFAYTA 93 (125)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTCCCSSCEEECCTTCCHHHHHHHHHHHTTS
T ss_pred ceEEEE-CCEEEechHHHHHHcCHHHHHHhcCCCCCCcEEEeCCCCCHHHHHHHHHhHcCC
Confidence 366664 689999999994 579999999986543 45788998 9999999999998754
No 21
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=96.91 E-value=0.0022 Score=40.55 Aligned_cols=59 Identities=15% Similarity=0.316 Sum_probs=48.1
Q ss_pred eEEEEcCCCCeEEecHHHH-HHhHHHHHHHhhCCC---CCCcccCCCCHHHHHHHHHHHHhhcc
Q 035736 6 KITLKSSDGEAFEVDEAVA-LESQTIKHMIEDDCA---DNGIPLPNVTSKILSKVIEYCKKHVE 65 (101)
Q Consensus 6 ~v~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~---~~~Ipl~~v~~~~L~kIiewc~~h~~ 65 (101)
-++|+. +|+.|.+.+.+. .+|..++.|+..... ...|.++++++.+++.+++|++...-
T Consensus 27 Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~ 89 (145)
T 4eoz_A 27 DCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKA 89 (145)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHHHHSCC
T ss_pred ceEEEE-CCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhhccCcc
Confidence 366665 689999999996 679999999986422 36899999999999999999987643
No 22
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=96.83 E-value=0.0048 Score=38.17 Aligned_cols=56 Identities=23% Similarity=0.272 Sum_probs=46.4
Q ss_pred eEEEEcCCCCeEEecHHHH-HHhHHHHHHHhhCCCCCCcccCCCCHHHHHHHHHHHHhhc
Q 035736 6 KITLKSSDGEAFEVDEAVA-LESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHV 64 (101)
Q Consensus 6 ~v~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~~~~Ipl~~v~~~~L~kIiewc~~h~ 64 (101)
-|+|+. +|+.|.+.+.+. ..|..+++|+... ...|.++++++.+++.+++|++.-.
T Consensus 29 Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~--~~~i~l~~~~~~~f~~ll~~~Ytg~ 85 (119)
T 2q81_A 29 DCTFVV-DGVHFKAHKAVLAACSEYFKMLFVDQ--KDVVHLDISNAAGLGQVLEFMYTAK 85 (119)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHC--CSGGGGGGCCHHHHHHHHHHHHHSC
T ss_pred ceEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC--CCEEEeCCCCHHHHHHHHHHHcCCC
Confidence 366664 689999999995 5799999999863 4678899999999999999998653
No 23
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=96.09 E-value=0.023 Score=35.22 Aligned_cols=58 Identities=22% Similarity=0.326 Sum_probs=45.6
Q ss_pred eEEEEcCCCCeEEecHHHH-HHhHHHHHHHhhCCC-CCCcccC-CCCHHHHHHHHHHHHhhc
Q 035736 6 KITLKSSDGEAFEVDEAVA-LESQTIKHMIEDDCA-DNGIPLP-NVTSKILSKVIEYCKKHV 64 (101)
Q Consensus 6 ~v~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~-~~~Ipl~-~v~~~~L~kIiewc~~h~ 64 (101)
-|+|+. +|+.|.+.+.+. ..|..++.|+.+... ...|.+| +++...++.+++|++.-.
T Consensus 31 Dv~l~v-~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~i~l~~~v~~~~f~~lL~~iYtg~ 91 (124)
T 2ihc_A 31 DVTIFV-EGQRFRAHRSVLAACSSYFHSRIVGQADGELNITLPEEVTVKGFEPLIQFAYTAK 91 (124)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTC---CEEEECCTTSCHHHHHHHHHHHHHSE
T ss_pred CEEEEE-CCEEEecHHHHHHHcCHHHHHHHcCCCCCCceEeecCCcCHHHHHHHHHHhcCCC
Confidence 356655 589999999995 579999999986532 3468885 899999999999998654
No 24
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=95.99 E-value=0.029 Score=35.39 Aligned_cols=58 Identities=21% Similarity=0.307 Sum_probs=46.6
Q ss_pred eEEEEcCCCCeEEecHHHH-HHhHHHHHHHhhCCC-CCCcccC-CCCHHHHHHHHHHHHhhc
Q 035736 6 KITLKSSDGEAFEVDEAVA-LESQTIKHMIEDDCA-DNGIPLP-NVTSKILSKVIEYCKKHV 64 (101)
Q Consensus 6 ~v~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~~-~~~Ipl~-~v~~~~L~kIiewc~~h~ 64 (101)
-|+|+. +|+.|.+.+.+. ..|..++.|+..... ...|.++ +++...++.+++|++.-.
T Consensus 38 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~~~i~l~~~v~~~~~~~lL~~~Ytg~ 98 (138)
T 2z8h_A 38 DVTVLV-EGQRFRAHRSVLAACSSYFHSRIVGQTDAELTVTLPEEVTVKGFEPLIQFAYTAK 98 (138)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCCCTTEEEECCTTSCHHHHHHHHHHHHHSC
T ss_pred CeEEEE-CCEEEechHHHHHHcCHHHHHHHhcCCCCCceEEeCCCCCHHHHHHHHHHhcCCC
Confidence 366665 589999999995 579999999986543 2468886 899999999999998753
No 25
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=95.82 E-value=0.023 Score=40.36 Aligned_cols=57 Identities=16% Similarity=0.335 Sum_probs=46.3
Q ss_pred eEEEEcCCCCeEEecHHHH-HHhHHHHHHHhhCC---CCCCcccCCCCHHHHHHHHHHHHhh
Q 035736 6 KITLKSSDGEAFEVDEAVA-LESQTIKHMIEDDC---ADNGIPLPNVTSKILSKVIEYCKKH 63 (101)
Q Consensus 6 ~v~L~S~DG~~f~v~~~~a-~~S~~i~~~l~~~~---~~~~Ipl~~v~~~~L~kIiewc~~h 63 (101)
-|+|+. +|+.|.+.+.++ .+|..++.|+.... ....|.|+++++.+++.+++|++.-
T Consensus 176 Dv~l~v-~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~ 236 (312)
T 3hqi_A 176 DCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTG 236 (312)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHHHHS
T ss_pred ceEEEE-CCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhhcCC
Confidence 456665 689999999994 67999999997532 2468999999999999999999864
No 26
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=95.78 E-value=0.014 Score=40.48 Aligned_cols=58 Identities=17% Similarity=0.291 Sum_probs=44.6
Q ss_pred eEEEEcCCCCeEEecHHHHH-HhHHHHHHHhhCC-----CCCCcccCCCCHHHHHHHHHHHHhhc
Q 035736 6 KITLKSSDGEAFEVDEAVAL-ESQTIKHMIEDDC-----ADNGIPLPNVTSKILSKVIEYCKKHV 64 (101)
Q Consensus 6 ~v~L~S~DG~~f~v~~~~a~-~S~~i~~~l~~~~-----~~~~Ipl~~v~~~~L~kIiewc~~h~ 64 (101)
-|+|.. +|+.|.+.+.+.. .|..++.|+.... ....|+++++++.+++.+++|++.-.
T Consensus 33 Dv~l~v-~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Yt~~ 96 (256)
T 3hve_A 33 DAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQ 96 (256)
T ss_dssp CEEEEE-TTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHHHHHSC
T ss_pred ceEEEE-CCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhccCCC
Confidence 356665 6899999999965 6999999997532 24579999999999999999998754
No 27
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=95.61 E-value=0.0096 Score=41.81 Aligned_cols=59 Identities=17% Similarity=0.269 Sum_probs=44.2
Q ss_pred eEEEEcC--CCCeEEecHHHHH-HhHHHHHHHhhCC---CCCCcccC------CCCHHHHHHHHHHHHhhc
Q 035736 6 KITLKSS--DGEAFEVDEAVAL-ESQTIKHMIEDDC---ADNGIPLP------NVTSKILSKVIEYCKKHV 64 (101)
Q Consensus 6 ~v~L~S~--DG~~f~v~~~~a~-~S~~i~~~l~~~~---~~~~Ipl~------~v~~~~L~kIiewc~~h~ 64 (101)
-|+|+.. ||+.|.+.+.+.. .|..++.|+.+.. ....|.|+ ++++.+++.+++|++...
T Consensus 34 Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~ 104 (279)
T 3i3n_A 34 DITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGR 104 (279)
T ss_dssp CEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHHHHHHHHHSE
T ss_pred CeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCC
Confidence 3677765 7999999999955 6999999987542 23578887 899999999999998654
No 28
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=93.13 E-value=0.034 Score=34.52 Aligned_cols=50 Identities=8% Similarity=0.135 Sum_probs=39.3
Q ss_pred EEEEcCCCCeEEecHHHHH-HhHHHHHHHhhCCCCCCcccCCCCHHHHHHHHHHHHhh
Q 035736 7 ITLKSSDGEAFEVDEAVAL-ESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKH 63 (101)
Q Consensus 7 v~L~S~DG~~f~v~~~~a~-~S~~i~~~l~~~~~~~~Ipl~~v~~~~L~kIiewc~~h 63 (101)
|+|.. +|+.|.+.+.+.. .|..++. ....|.|+++++.+++.+++|++.-
T Consensus 33 v~l~v-~~~~f~aHk~vLaa~S~yF~~------~~~~i~l~~v~~~~f~~ll~fiYtg 83 (119)
T 3m5b_A 33 TLITV-GSQEFPAHSLVLAGVSQQLGR------RGQWALGEGISPSTFAQLLNFVYGE 83 (119)
T ss_dssp EEEEE-TTEEEEECHHHHHTTCGGGCC------CEEEECCSSCCHHHHHHHHHHHTTC
T ss_pred eEEEE-CCEEEeeEHHHHHHcCHHHhc------CCCEEEeCCCCHHHHHHHHHHHcCC
Confidence 56665 6999999999955 4766653 2356889999999999999998753
No 29
>1xb4_A VPS25, hypothetical 23.6 kDa protein in YUH1-URA8 intergenic region; winged helix, unknown function; 3.10A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54 PDB: 1w7p_B 1u5t_C
Probab=51.64 E-value=6.4 Score=26.85 Aligned_cols=15 Identities=20% Similarity=0.297 Sum_probs=12.2
Q ss_pred HHHHHHHHhhcccCC
Q 035736 54 SKVIEYCKKHVEASK 68 (101)
Q Consensus 54 ~kIiewc~~h~~~~~ 68 (101)
..|+.||+||+-...
T Consensus 32 ~LIL~ycr~~ki~~l 46 (202)
T 1xb4_A 32 DIISQYCKTKKIWYM 46 (202)
T ss_dssp HHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhCeeEe
Confidence 579999999987654
No 30
>2xuv_A HDEB, 10K-L protein; unknown function; HET: MLY; 1.50A {Escherichia coli}
Probab=50.58 E-value=20 Score=20.72 Aligned_cols=28 Identities=21% Similarity=0.445 Sum_probs=21.3
Q ss_pred CCCcccCCCCHHHHHHHHHHHHhhcccC
Q 035736 40 DNGIPLPNVTSKILSKVIEYCKKHVEAS 67 (101)
Q Consensus 40 ~~~Ipl~~v~~~~L~kIiewc~~h~~~~ 67 (101)
...+.+.++.-..-.+|++||..|....
T Consensus 38 ~D~vd~~~~e~~~~Pkvie~Ckk~P~~s 65 (79)
T 2xuv_A 38 GDTVTLNETDLTQIPXVIEYCXXNPQXN 65 (79)
T ss_dssp CSBCCCCHHHHHHHHHHHHHHHHCTTSB
T ss_pred CCccchhhhhhhcccHHHHHHhcCCcch
Confidence 3467887776667899999999996543
No 31
>3cuq_C Vacuolar protein-sorting-associated protein 25; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_C
Probab=46.71 E-value=8.4 Score=25.67 Aligned_cols=14 Identities=36% Similarity=0.786 Sum_probs=11.5
Q ss_pred HHHHHHHHhhcccC
Q 035736 54 SKVIEYCKKHVEAS 67 (101)
Q Consensus 54 ~kIiewc~~h~~~~ 67 (101)
..|+.||.||+-..
T Consensus 35 ~LIl~ycr~~k~~~ 48 (176)
T 3cuq_C 35 SLVLSFCRLHKQSS 48 (176)
T ss_dssp HHHHHHHHHHTCCE
T ss_pred HHHHHHHHHhCeeE
Confidence 57999999998754
No 32
>1got_G GT-gamma; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: a.137.3.1 PDB: 1tbg_E 2trc_G 1b9y_B 1b9x_B 1a0r_G*
Probab=46.55 E-value=13 Score=21.19 Aligned_cols=24 Identities=13% Similarity=0.216 Sum_probs=18.6
Q ss_pred CCcccCCCCHHHHHHHHHHHHhhcccCC
Q 035736 41 NGIPLPNVTSKILSKVIEYCKKHVEASK 68 (101)
Q Consensus 41 ~~Ipl~~v~~~~L~kIiewc~~h~~~~~ 68 (101)
..|++ |.+..-+++||+.|..+.+
T Consensus 36 ~RikV----S~aa~~L~~Yce~~~~~Dp 59 (73)
T 1got_G 36 ERMLV----SKCCEEFRDYVEERSGEDP 59 (73)
T ss_dssp CCCCH----HHHHHHHHHHHHHHGGGCH
T ss_pred chhhH----HHHHHHHHHHHHhcCCCCC
Confidence 45665 7888999999999976554
No 33
>2ra2_A Putative lipoprotein; X-RAY, NESG, STR88A, Q7CPV8, structural genomics, PSI-2, protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.38.1.6
Probab=36.34 E-value=26 Score=19.48 Aligned_cols=18 Identities=22% Similarity=0.420 Sum_probs=11.2
Q ss_pred CCCCceEEEEcCCCCeEEe
Q 035736 1 MSTSKKITLKSSDGEAFEV 19 (101)
Q Consensus 1 m~~~~~v~L~S~DG~~f~v 19 (101)
||+ ..+.+.+.||+.+..
T Consensus 1 ~sS-S~yVitt~DG~~IvT 18 (64)
T 2ra2_A 1 MSG-PNYVMHTNDGRSIVT 18 (64)
T ss_dssp ----CCEEEEETTSCEEEC
T ss_pred CCC-CCEEEEeCCCcEEEc
Confidence 664 457788888888754
No 34
>2pjh_A Protein NPL4, nuclear protein localization protein 4 homolog; UFD1, NPL4, AAA, protein binding, transport protein; NMR {Mus musculus}
Probab=33.78 E-value=21 Score=20.21 Aligned_cols=19 Identities=32% Similarity=0.433 Sum_probs=13.4
Q ss_pred CCCCceEEEEcCCCCeEEec
Q 035736 1 MSTSKKITLKSSDGEAFEVD 20 (101)
Q Consensus 1 m~~~~~v~L~S~DG~~f~v~ 20 (101)
|++.-.++++|.+| .+.|+
T Consensus 1 ~~~~m~lRvrs~~G-~~Ri~ 19 (80)
T 2pjh_A 1 MAESIIIRVQSPDG-VKRIT 19 (80)
T ss_dssp -CCCCCCEEECSSE-EEECC
T ss_pred CCCcEEEEEECCCC-CEEEE
Confidence 66556799999999 44454
No 35
>3phx_B Ubiquitin-like protein ISG15; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase-protein complex; 1.60A {Homo sapiens}
Probab=32.81 E-value=34 Score=18.54 Aligned_cols=22 Identities=14% Similarity=0.258 Sum_probs=15.4
Q ss_pred CCCCceEEEEcCCCCeEEecHH
Q 035736 1 MSTSKKITLKSSDGEAFEVDEA 22 (101)
Q Consensus 1 m~~~~~v~L~S~DG~~f~v~~~ 22 (101)
|++.-.+.+++.+|+.|.++-.
T Consensus 1 ~~~~m~i~Vk~~~g~~~~~~v~ 22 (79)
T 3phx_B 1 MDEPLSILVRNNKGRSSTYEVR 22 (79)
T ss_dssp --CCEEEEEECTTSCEEEEEEC
T ss_pred CCCCEEEEEEeCCCCEEEEEEC
Confidence 5555678999999998876543
No 36
>3v5w_G G gamma-I, guanine nucleotide-binding protein G(I)/G(S)/G(O) gamma-2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Bos taurus} PDB: 1xhm_B 3pvu_G* 3cik_G 3krw_G* 3krx_G* 3psc_G 1omw_G* 3pvw_G* 3uzs_G 1gp2_G* 1gg2_G* 2bcj_G* 3ah8_G* 2qns_B 3kj5_B 3sn6_G*
Probab=32.51 E-value=40 Score=19.43 Aligned_cols=24 Identities=25% Similarity=0.598 Sum_probs=19.3
Q ss_pred CCcccCCCCHHHHHHHHHHHHhhcccCC
Q 035736 41 NGIPLPNVTSKILSKVIEYCKKHVEASK 68 (101)
Q Consensus 41 ~~Ipl~~v~~~~L~kIiewc~~h~~~~~ 68 (101)
+.|++ |.+-.-+++||+.|....|
T Consensus 32 ~RikV----SqaaadL~~yc~~~~~~Dp 55 (77)
T 3v5w_G 32 DRIKV----SKAAADLMAYCEAHAKEDP 55 (77)
T ss_dssp CCCCH----HHHHHHHHHHHHHSGGGCT
T ss_pred chhhH----HHHHHHHHHHHHhcCCCCC
Confidence 45666 7888899999999987655
No 37
>2rb6_A Uncharacterized protein; NESG, Q8EI81_sheon, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.50A {Shewanella oneidensis} SCOP: b.38.1.6
Probab=27.35 E-value=62 Score=17.75 Aligned_cols=14 Identities=14% Similarity=0.392 Sum_probs=10.1
Q ss_pred eEEEEcCCCCeEEe
Q 035736 6 KITLKSSDGEAFEV 19 (101)
Q Consensus 6 ~v~L~S~DG~~f~v 19 (101)
.+.+.++||+.+..
T Consensus 4 ~yvitT~DG~~IvT 17 (61)
T 2rb6_A 4 QYIMSTKDGKMITS 17 (61)
T ss_dssp EEEEEETTSCEEEE
T ss_pred cEEEEeCCCcEEEc
Confidence 57777888877754
No 38
>2blf_B SORB, sulfite\:cytochrome C oxidoreductase subunit B; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_B* 2c9x_B* 2ca3_B* 2ca4_B*
Probab=24.53 E-value=97 Score=17.09 Aligned_cols=16 Identities=19% Similarity=0.245 Sum_probs=12.0
Q ss_pred CCHHHHHHHHHHHHhh
Q 035736 48 VTSKILSKVIEYCKKH 63 (101)
Q Consensus 48 v~~~~L~kIiewc~~h 63 (101)
++.+..+.|++|+..|
T Consensus 65 ls~~e~~~I~~YL~~~ 80 (81)
T 2blf_B 65 VDEADAKAIADYLAKT 80 (81)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh
Confidence 6677788888887665
No 39
>3kdf_A Replication protein A 14 kDa subunit; wheat GERM cell free, protein complex, center for eukaryotic structural genomics, PSI; HET: MSE; 1.98A {Homo sapiens} SCOP: b.40.4.3 PDB: 1quq_B 1l1o_A
Probab=24.36 E-value=68 Score=19.72 Aligned_cols=64 Identities=11% Similarity=0.157 Sum_probs=39.7
Q ss_pred CceEEEEcCCCCeEEecHHHHHHhHHHHHHHhhCC---C------CCCcccC-C---CCHHHHHHHHHHHHhhcccCC
Q 035736 4 SKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDC---A------DNGIPLP-N---VTSKILSKVIEYCKKHVEASK 68 (101)
Q Consensus 4 ~~~v~L~S~DG~~f~v~~~~a~~S~~i~~~l~~~~---~------~~~Ipl~-~---v~~~~L~kIiewc~~h~~~~~ 68 (101)
+..++|.|.||..+.|...--. ..-+..++|-.| . ...+++. + ++-....++++....+++..+
T Consensus 38 g~~~~l~s~Dg~~Vtv~l~~p~-~~~l~~~vEViG~V~~~~tI~~~~~~~fg~~~~~fD~~~yn~lv~l~~~~~~lf~ 114 (121)
T 3kdf_A 38 GKMFILSDGEGKNGTIELMEPL-DEEISGIVEVVGRVTAKATILCTSYVQFKEDSHPFDLGLYNEAVKIIHDFPQFYP 114 (121)
T ss_dssp SSEEEEECTTSCEEEEECSSCC-SSCCCSEEEEEEEECTTSCEEEEEEEECCCSSSCCCHHHHHHHHHHHHHCGGGSC
T ss_pred CCEEEEEeCCCCEEEEEeCCCC-CcccCcEEEEEEEECCCCeEEEEEEEecCCCCcccCHHHHHHHHHHHhcCCcccc
Confidence 6789999999999988754200 000111222111 0 1235554 5 999999999999988776443
No 40
>2pi2_E Replication protein A 14 kDa subunit; FULL-length RPA14/32, ssDNA binding protein, OB-fold, dioxan replication, DNA binding protein; 2.00A {Homo sapiens} SCOP: b.40.4.3 PDB: 2pqa_B 2z6k_C
Probab=22.67 E-value=74 Score=20.19 Aligned_cols=63 Identities=11% Similarity=0.150 Sum_probs=38.9
Q ss_pred CCceEEEEcCCCCeEEecHHHHHHhHHHHHHHhhCC---C------CCCcccC-C---CCHHHHHHHHHHHHhhccc
Q 035736 3 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDC---A------DNGIPLP-N---VTSKILSKVIEYCKKHVEA 66 (101)
Q Consensus 3 ~~~~v~L~S~DG~~f~v~~~~a~~S~~i~~~l~~~~---~------~~~Ipl~-~---v~~~~L~kIiewc~~h~~~ 66 (101)
.+..+.|+|+||..+.|...-- .+.-+..++|-.| . ...+++. + ++-....++++.+...++.
T Consensus 58 ~G~~~~l~s~Dg~~VtV~l~~p-L~~~~~~~VEViG~V~~~~tI~~~~~~~fGd~~~~fD~~~yn~lv~l~~~f~~l 133 (142)
T 2pi2_E 58 TGKMFILSDGEGKNGTIELMEP-LDEEISGIVEVVGRVTAKATILCTSYVQFKEDSHPFDLGLYNEAVKIIHDFPQF 133 (142)
T ss_dssp TSSEEEEECTTSCEEEEECSSC-CSSCCCSEEEEEEEECTTSCEEEEEEEECCCSSSCCCHHHHHHHHHHHHHCGGG
T ss_pred CCCEEEEEeCCCcEEEEEeCCC-CCccCCCEEEEEEEECCCCcEEEEEEEecCCCccccCHHHHHHHHHHHHhCccc
Confidence 3678999999999999864210 0001122232211 0 1245564 4 9999999999998866653
No 41
>3gox_A Restriction endonuclease HPY99I; endonuclease-DNA complex, restriction enzyme, HPY99I, pseudopalindrome; HET: 1PE; 1.50A {Helicobacter pylori} PDB: 3fc3_A*
Probab=22.55 E-value=55 Score=22.22 Aligned_cols=17 Identities=53% Similarity=0.573 Sum_probs=14.8
Q ss_pred CCHHHHHHHHHHHHhhc
Q 035736 48 VTSKILSKVIEYCKKHV 64 (101)
Q Consensus 48 v~~~~L~kIiewc~~h~ 64 (101)
=+...|+++++|++.|.
T Consensus 183 Dnp~~L~rai~YLe~H~ 199 (200)
T 3gox_A 183 DNPKFLEKVIEYLKKYE 199 (200)
T ss_dssp TCHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHhcc
Confidence 45799999999999985
No 42
>2k57_A Putative lipoprotein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pseudomonas syringae PV} SCOP: b.38.1.6
Probab=21.40 E-value=92 Score=17.03 Aligned_cols=14 Identities=14% Similarity=0.359 Sum_probs=9.6
Q ss_pred eEEEEcCCCCeEEe
Q 035736 6 KITLKSSDGEAFEV 19 (101)
Q Consensus 6 ~v~L~S~DG~~f~v 19 (101)
.+.+.+.||+.+..
T Consensus 4 ~yvitt~DG~~IvT 17 (61)
T 2k57_A 4 PTVITLNDGREIQA 17 (61)
T ss_dssp CEEEEESSSCEEEE
T ss_pred ceEEEeCCCcEEEc
Confidence 46677777777754
No 43
>2hj8_A Interferon-induced 17 kDa protein; HR2873B, human ISG15, structure, northeast structural genomics consortium, protein structure initiative, NESG; NMR {Homo sapiens}
Probab=21.19 E-value=62 Score=18.03 Aligned_cols=21 Identities=14% Similarity=0.279 Sum_probs=15.1
Q ss_pred CCCCceEEEEcCCCCeEEecH
Q 035736 1 MSTSKKITLKSSDGEAFEVDE 21 (101)
Q Consensus 1 m~~~~~v~L~S~DG~~f~v~~ 21 (101)
|.+.-.|.+++.+|+.|.++-
T Consensus 1 m~~~m~I~Vk~~~g~~~~~~v 21 (88)
T 2hj8_A 1 MDEPLSILVRNNKGRSSTYEV 21 (88)
T ss_dssp -CCEEEEEEEETTSCEEEEEE
T ss_pred CCccEEEEEECCCCCEEEEEE
Confidence 555567899999998887653
No 44
>1igq_A Transcriptional repressor protein KORB; SH3 domain, dimerization domain; 1.70A {Escherichia coli} SCOP: b.34.1.3 PDB: 1igu_A
Probab=20.93 E-value=94 Score=17.09 Aligned_cols=20 Identities=35% Similarity=0.406 Sum_probs=15.6
Q ss_pred CCceEEEEcCC-CCeEEecHH
Q 035736 3 TSKKITLKSSD-GEAFEVDEA 22 (101)
Q Consensus 3 ~~~~v~L~S~D-G~~f~v~~~ 22 (101)
+...+.|+-.| |++|+++..
T Consensus 32 ~~G~~wiKyED~G~e~E~d~~ 52 (62)
T 1igq_A 32 AEGYAWLKYEDDGQEFEANLA 52 (62)
T ss_dssp STTEEEEEETTTCCEEEEEGG
T ss_pred cCceEEEEEecCCcEEEEecc
Confidence 34578888888 999998754
No 45
>1dj8_A HDEA, protein HNS-dependent expression A; alpha helical, structural protein; 2.00A {Escherichia coli} SCOP: a.57.1.1 PDB: 1bg8_A
Probab=20.43 E-value=62 Score=18.97 Aligned_cols=23 Identities=4% Similarity=0.393 Sum_probs=16.0
Q ss_pred CcccCCCCHHHHHHHHHHHHhhcc
Q 035736 42 GIPLPNVTSKILSKVIEYCKKHVE 65 (101)
Q Consensus 42 ~Ipl~~v~~~~L~kIiewc~~h~~ 65 (101)
.|-+..+.. +-.+|++||..|..
T Consensus 49 vvD~~~~e~-v~P~vve~Ckk~P~ 71 (89)
T 1dj8_A 49 VLDVQGIAT-VTPAIVQACTQDKQ 71 (89)
T ss_dssp CCCHHHHHH-HHHHHHHHHHTTTT
T ss_pred eeehhHHHH-hhHHHHHHHHhCch
Confidence 455544433 37899999999854
Done!