Query 035739
Match_columns 335
No_of_seqs 157 out of 1542
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 09:40:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035739.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035739hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h7u_A Aldo-keto reductase; st 100.0 3.3E-68 1.1E-72 496.5 32.1 313 7-335 20-333 (335)
2 3h7r_A Aldo-keto reductase; st 100.0 8E-68 2.7E-72 492.9 28.0 312 4-335 17-329 (331)
3 1zgd_A Chalcone reductase; pol 100.0 4.8E-67 1.6E-71 484.7 29.5 306 11-335 5-312 (312)
4 3ln3_A Dihydrodiol dehydrogena 100.0 4.4E-65 1.5E-69 474.1 34.3 306 10-327 4-321 (324)
5 4gie_A Prostaglandin F synthas 100.0 9.1E-65 3.1E-69 464.5 31.0 282 8-331 9-290 (290)
6 1afs_A 3-alpha-HSD, 3-alpha-hy 100.0 4.5E-64 1.6E-68 466.8 32.4 307 10-328 3-321 (323)
7 3f7j_A YVGN protein; aldo-keto 100.0 4E-64 1.4E-68 457.1 30.8 265 10-315 4-268 (276)
8 3buv_A 3-OXO-5-beta-steroid 4- 100.0 1.4E-63 4.9E-68 464.1 33.3 307 10-327 5-323 (326)
9 3o3r_A Aldo-keto reductase fam 100.0 1.8E-63 6.2E-68 461.6 33.0 302 12-328 2-314 (316)
10 1qwk_A Aldose reductase, aldo- 100.0 1.3E-63 4.3E-68 462.7 31.7 294 12-328 5-314 (317)
11 3b3e_A YVGN protein; aldo-keto 100.0 1E-63 3.6E-68 460.5 29.8 263 11-314 39-301 (310)
12 3o0k_A Aldo/keto reductase; ss 100.0 4.4E-64 1.5E-68 457.8 26.8 263 6-308 20-282 (283)
13 2wzm_A Aldo-keto reductase; ox 100.0 8.8E-64 3E-68 456.1 28.7 272 1-313 1-272 (283)
14 1s1p_A Aldo-keto reductase fam 100.0 3E-63 1E-67 462.7 32.2 306 10-328 3-321 (331)
15 2bgs_A Aldose reductase; holoe 100.0 1.9E-63 6.5E-68 465.0 29.6 306 7-334 31-341 (344)
16 1hw6_A 2,5-diketo-D-gluconic a 100.0 1.6E-63 5.5E-68 453.5 27.6 265 10-312 1-265 (278)
17 1vbj_A Prostaglandin F synthas 100.0 2.8E-63 9.6E-68 452.3 29.2 266 7-313 4-269 (281)
18 1us0_A Aldose reductase; oxido 100.0 1.2E-62 4.1E-67 456.0 33.9 301 12-327 2-313 (316)
19 1mi3_A Xylose reductase, XR; a 100.0 4.3E-63 1.5E-67 460.2 29.8 291 10-316 3-311 (322)
20 3up8_A Putative 2,5-diketo-D-g 100.0 4.2E-63 1.4E-67 454.1 29.2 264 8-313 20-285 (298)
21 4f40_A Prostaglandin F2-alpha 100.0 5E-63 1.7E-67 452.6 28.9 270 12-314 10-279 (288)
22 1mzr_A 2,5-diketo-D-gluconate 100.0 4.4E-62 1.5E-66 446.9 29.3 266 8-313 21-286 (296)
23 3n2t_A Putative oxidoreductase 100.0 7.2E-63 2.5E-67 463.1 24.0 283 10-323 17-345 (348)
24 4gac_A Alcohol dehydrogenase [ 100.0 8.6E-62 2.9E-66 452.1 30.6 290 12-315 2-298 (324)
25 3eau_A Voltage-gated potassium 100.0 4.6E-62 1.6E-66 454.4 28.1 274 10-313 1-325 (327)
26 3b3d_A YTBE protein, putative 100.0 6.7E-62 2.3E-66 450.1 29.0 266 12-315 40-306 (314)
27 1ur3_M Hypothetical oxidoreduc 100.0 2.4E-62 8.1E-67 454.1 25.1 277 9-314 20-318 (319)
28 3v0s_A Perakine reductase; AKR 100.0 8.7E-63 3E-67 460.8 21.4 280 12-321 1-321 (337)
29 1vp5_A 2,5-diketo-D-gluconic a 100.0 2.4E-61 8E-66 442.5 29.3 264 13-312 15-278 (298)
30 3lut_A Voltage-gated potassium 100.0 7.8E-62 2.7E-66 459.4 26.9 280 10-320 36-366 (367)
31 1pz1_A GSP69, general stress p 100.0 6.1E-62 2.1E-66 454.3 25.2 279 12-319 1-322 (333)
32 1pyf_A IOLS protein; beta-alph 100.0 9.5E-62 3.3E-66 449.4 24.8 270 12-310 1-310 (312)
33 3krb_A Aldose reductase; ssgci 100.0 4.2E-61 1.4E-65 448.6 27.4 289 9-312 9-317 (334)
34 3erp_A Putative oxidoreductase 100.0 1.3E-60 4.4E-65 448.7 28.7 276 5-309 27-349 (353)
35 1ynp_A Oxidoreductase, AKR11C1 100.0 5.9E-61 2E-65 444.5 23.6 268 8-314 17-312 (317)
36 3n6q_A YGHZ aldo-keto reductas 100.0 8.6E-60 2.9E-64 442.2 30.4 274 9-311 10-334 (346)
37 1lqa_A TAS protein; TIM barrel 100.0 2.3E-60 7.7E-65 446.4 26.4 283 12-310 1-339 (346)
38 4exb_A Putative uncharacterize 100.0 3.8E-59 1.3E-63 427.3 20.6 248 9-300 27-292 (292)
39 1gve_A Aflatoxin B1 aldehyde r 100.0 8.5E-58 2.9E-62 425.6 20.4 262 25-314 4-320 (327)
40 2bp1_A Aflatoxin B1 aldehyde r 100.0 2.7E-57 9.4E-62 426.9 20.6 263 22-313 35-352 (360)
41 3cf4_A Acetyl-COA decarboxylas 97.9 4.3E-06 1.5E-10 85.3 2.4 131 117-286 231-384 (807)
42 2nql_A AGR_PAT_674P, isomerase 77.2 23 0.00077 32.5 11.5 151 47-233 164-319 (388)
43 3gd6_A Muconate cycloisomerase 76.7 20 0.00067 33.0 10.9 153 47-234 142-300 (391)
44 1r0m_A N-acylamino acid racema 76.3 27 0.00093 31.7 11.8 148 47-233 148-300 (375)
45 2ovl_A Putative racemase; stru 75.0 48 0.0017 30.0 13.9 146 47-229 146-299 (371)
46 2gl5_A Putative dehydratase pr 74.0 54 0.0019 30.1 13.5 149 47-231 150-328 (410)
47 1ydn_A Hydroxymethylglutaryl-C 72.6 12 0.00042 32.9 8.1 101 112-232 26-142 (295)
48 3qy7_A Tyrosine-protein phosph 72.4 32 0.0011 29.7 10.6 186 44-264 15-223 (262)
49 4djd_D C/Fe-SP, corrinoid/iron 71.8 16 0.00055 32.8 8.6 101 113-232 82-189 (323)
50 2rdx_A Mandelate racemase/muco 71.6 44 0.0015 30.4 11.9 150 47-233 145-298 (379)
51 2poz_A Putative dehydratase; o 71.2 55 0.0019 29.8 12.6 150 47-232 137-310 (392)
52 1nu5_A Chloromuconate cycloiso 70.1 51 0.0017 29.7 12.0 152 47-234 142-301 (370)
53 3rr1_A GALD, putative D-galact 70.0 66 0.0022 29.6 12.8 148 47-231 125-288 (405)
54 2o56_A Putative mandelate race 70.0 67 0.0023 29.4 15.5 150 47-232 152-326 (407)
55 1mdl_A Mandelate racemase; iso 69.9 62 0.0021 29.0 14.2 147 47-229 144-297 (359)
56 1sjd_A N-acylamino acid racema 69.8 63 0.0022 29.1 13.0 149 47-233 141-294 (368)
57 2ox4_A Putative mandelate race 69.7 55 0.0019 30.0 12.2 151 46-232 145-320 (403)
58 3i4k_A Muconate lactonizing en 69.0 69 0.0023 29.2 13.7 152 47-234 148-307 (383)
59 3mwc_A Mandelate racemase/muco 68.4 33 0.0011 31.6 10.3 148 48-233 164-316 (400)
60 2og9_A Mandelate racemase/muco 67.7 47 0.0016 30.4 11.2 146 47-229 162-315 (393)
61 2qgy_A Enolase from the enviro 67.1 75 0.0026 28.9 14.3 149 47-231 149-304 (391)
62 3q45_A Mandelate racemase/muco 66.9 74 0.0025 28.8 13.8 152 47-234 140-297 (368)
63 2p8b_A Mandelate racemase/muco 66.4 57 0.002 29.4 11.5 151 47-233 141-298 (369)
64 2yci_X 5-methyltetrahydrofolat 66.1 37 0.0013 29.5 9.6 100 109-231 32-133 (271)
65 3i6e_A Muconate cycloisomerase 65.9 70 0.0024 29.1 12.0 151 47-234 148-305 (385)
66 3ozy_A Putative mandelate race 65.2 82 0.0028 28.7 13.4 148 47-230 151-305 (389)
67 1nvm_A HOA, 4-hydroxy-2-oxoval 64.8 34 0.0012 30.8 9.5 105 113-230 31-140 (345)
68 2qq6_A Mandelate racemase/muco 64.8 85 0.0029 28.7 12.8 150 47-232 149-321 (410)
69 2qde_A Mandelate racemase/muco 64.4 60 0.002 29.7 11.3 151 47-234 145-302 (397)
70 2hzg_A Mandelate racemase/muco 63.4 83 0.0028 28.7 12.1 147 47-229 145-304 (401)
71 2pp0_A L-talarate/galactarate 63.2 65 0.0022 29.5 11.3 146 47-229 175-328 (398)
72 2zc8_A N-acylamino acid racema 62.1 42 0.0014 30.3 9.7 148 47-233 141-293 (369)
73 1ydo_A HMG-COA lyase; TIM-barr 62.0 21 0.00072 31.7 7.4 152 111-295 27-197 (307)
74 2hxt_A L-fuconate dehydratase; 61.1 1E+02 0.0036 28.5 12.7 144 47-228 198-350 (441)
75 3eez_A Putative mandelate race 60.9 42 0.0014 30.6 9.4 151 47-234 145-299 (378)
76 1tkk_A Similar to chloromucona 60.5 78 0.0027 28.4 11.2 153 47-233 140-299 (366)
77 3l8a_A METC, putative aminotra 60.5 97 0.0033 28.0 13.5 145 48-233 76-237 (421)
78 3dg3_A Muconate cycloisomerase 59.4 84 0.0029 28.3 11.2 152 47-234 139-297 (367)
79 2ftp_A Hydroxymethylglutaryl-C 58.4 54 0.0018 28.8 9.4 104 111-232 29-146 (302)
80 2pju_A Propionate catabolism o 57.0 32 0.0011 29.0 7.3 67 159-228 92-159 (225)
81 2pgw_A Muconate cycloisomerase 57.0 1.1E+02 0.0039 27.6 13.8 151 47-233 147-302 (384)
82 2q5c_A NTRC family transcripti 56.7 26 0.00088 28.8 6.6 67 159-228 80-147 (196)
83 4dwd_A Mandelate racemase/muco 56.2 1.2E+02 0.0041 27.7 12.3 148 47-231 139-300 (393)
84 2h9a_B CO dehydrogenase/acetyl 55.0 97 0.0033 27.5 10.4 99 112-231 75-181 (310)
85 3szu_A ISPH, 4-hydroxy-3-methy 54.9 18 0.0006 32.6 5.4 105 173-290 171-290 (328)
86 1vyr_A Pentaerythritol tetrani 53.8 1E+02 0.0034 27.9 10.7 34 164-197 284-317 (364)
87 2r14_A Morphinone reductase; H 53.3 1E+02 0.0034 28.1 10.6 65 115-197 258-322 (377)
88 2gou_A Oxidoreductase, FMN-bin 52.4 1.1E+02 0.0038 27.7 10.7 34 164-197 283-316 (365)
89 1rvk_A Isomerase/lactonizing e 52.3 1.3E+02 0.0046 27.0 11.8 147 47-229 149-309 (382)
90 3stp_A Galactonate dehydratase 52.2 88 0.003 28.9 10.1 148 47-230 179-339 (412)
91 3bjs_A Mandelate racemase/muco 52.1 1.5E+02 0.005 27.4 12.0 144 49-229 187-338 (428)
92 1v77_A PH1877P, hypothetical p 51.8 1E+02 0.0034 25.4 10.1 89 166-264 89-195 (212)
93 1vp8_A Hypothetical protein AF 51.7 1E+02 0.0034 25.4 10.2 74 159-232 28-107 (201)
94 1wv2_A Thiazole moeity, thiazo 51.7 1.2E+02 0.004 26.2 18.5 207 13-290 9-232 (265)
95 3fv9_G Mandelate racemase/muco 51.4 1.2E+02 0.004 27.7 10.8 152 47-234 145-305 (386)
96 3my9_A Muconate cycloisomerase 51.1 76 0.0026 28.8 9.4 152 47-234 146-304 (377)
97 4e8g_A Enolase, mandelate race 51.0 1.3E+02 0.0044 27.5 11.0 150 47-234 164-320 (391)
98 3v7e_A Ribosome-associated pro 50.8 12 0.0004 26.2 3.0 58 166-230 3-60 (82)
99 1vpq_A Hypothetical protein TM 50.7 93 0.0032 27.0 9.4 69 62-139 49-130 (273)
100 3ec1_A YQEH GTPase; atnos1, at 50.4 1.1E+02 0.0037 27.7 10.3 121 47-193 57-184 (369)
101 1t57_A Conserved protein MTH16 50.4 99 0.0034 25.5 8.8 74 159-232 36-114 (206)
102 3l5l_A Xenobiotic reductase A; 50.1 1.4E+02 0.0049 26.8 11.5 135 45-196 147-318 (363)
103 1x87_A Urocanase protein; stru 49.9 45 0.0015 31.6 7.4 107 75-207 145-263 (551)
104 3dzz_A Putative pyridoxal 5'-p 49.9 1.3E+02 0.0046 26.3 13.5 51 183-233 147-203 (391)
105 3r0u_A Enzyme of enolase super 49.8 1.5E+02 0.0051 26.9 15.0 153 47-234 142-301 (379)
106 1tzz_A Hypothetical protein L1 49.2 1.5E+02 0.0052 26.8 12.7 150 47-230 165-326 (392)
107 3iix_A Biotin synthetase, puta 49.1 57 0.0019 28.9 8.2 120 157-292 84-216 (348)
108 1uwk_A Urocanate hydratase; hy 48.9 45 0.0015 31.6 7.3 128 54-207 117-268 (557)
109 3ro6_B Putative chloromuconate 48.6 68 0.0023 28.8 8.6 152 47-234 140-298 (356)
110 2fkn_A Urocanate hydratase; ro 48.0 45 0.0015 31.6 7.1 128 54-207 113-264 (552)
111 3sjn_A Mandelate racemase/muco 47.9 1.5E+02 0.005 26.8 10.8 147 49-231 148-304 (374)
112 2qgq_A Protein TM_1862; alpha- 47.7 1.4E+02 0.0048 25.9 11.9 123 157-293 33-180 (304)
113 2xvc_A ESCRT-III, SSO0910; cel 47.2 16 0.00053 23.8 2.8 20 158-177 38-57 (59)
114 2oz8_A MLL7089 protein; struct 46.1 1.7E+02 0.0058 26.5 15.1 151 47-229 145-296 (389)
115 4e5t_A Mandelate racemase / mu 45.9 1.8E+02 0.006 26.6 13.5 148 47-230 151-317 (404)
116 3j21_Z 50S ribosomal protein L 45.9 70 0.0024 22.9 6.7 61 162-229 3-63 (99)
117 3ddm_A Putative mandelate race 45.8 1.4E+02 0.0049 27.1 10.4 146 49-229 157-308 (392)
118 2zad_A Muconate cycloisomerase 45.5 1.6E+02 0.0055 26.0 13.2 151 47-233 139-295 (345)
119 2ps2_A Putative mandelate race 45.2 71 0.0024 28.8 8.2 152 47-234 146-301 (371)
120 4h1z_A Enolase Q92ZS5; dehydra 44.7 1.9E+02 0.0064 26.5 12.9 152 47-234 188-344 (412)
121 2gdq_A YITF; mandelate racemas 43.3 1.8E+02 0.0061 26.2 10.7 145 49-229 141-293 (382)
122 2qv5_A AGR_C_5032P, uncharacte 42.1 91 0.0031 26.9 7.9 59 121-184 75-133 (261)
123 3r4e_A Mandelate racemase/muco 42.0 1.5E+02 0.0051 27.3 10.0 150 47-232 143-331 (418)
124 3p6l_A Sugar phosphate isomera 41.9 1.1E+02 0.0037 25.6 8.5 86 162-259 24-129 (262)
125 4had_A Probable oxidoreductase 41.6 1.2E+02 0.0041 26.7 9.1 100 165-273 39-162 (350)
126 2lbw_A H/ACA ribonucleoprotein 40.8 67 0.0023 24.0 6.1 64 160-229 6-69 (121)
127 3fst_A 5,10-methylenetetrahydr 40.5 1.9E+02 0.0065 25.4 11.4 148 51-225 41-204 (304)
128 3toy_A Mandelate racemase/muco 40.4 2.1E+02 0.0072 25.9 12.7 146 47-228 167-320 (383)
129 3ewb_X 2-isopropylmalate synth 40.0 1.7E+02 0.0059 25.4 9.6 140 112-294 27-189 (293)
130 3qld_A Mandelate racemase/muco 39.9 2.2E+02 0.0074 25.9 13.3 150 47-234 149-302 (388)
131 4dye_A Isomerase; enolase fami 39.8 2.2E+02 0.0074 26.0 10.7 144 48-230 169-319 (398)
132 1tv8_A MOAA, molybdenum cofact 39.6 1.9E+02 0.0066 25.3 12.9 156 46-257 50-223 (340)
133 2ale_A SNU13, NHP2/L7AE family 39.5 48 0.0017 25.5 5.2 64 160-229 18-81 (134)
134 3cpq_A 50S ribosomal protein L 39.2 49 0.0017 24.3 5.0 63 160-229 7-69 (110)
135 1aj0_A DHPS, dihydropteroate s 39.2 1.5E+02 0.0053 25.7 9.1 102 112-231 36-141 (282)
136 4e4u_A Mandalate racemase/muco 39.2 2.3E+02 0.0078 25.9 13.7 148 47-230 144-310 (412)
137 3jva_A Dipeptide epimerase; en 38.6 2.1E+02 0.0073 25.4 14.2 150 47-232 139-294 (354)
138 3dnf_A ISPH, LYTB, 4-hydroxy-3 38.0 11 0.00038 33.4 1.4 107 171-290 155-274 (297)
139 3pdi_B Nitrogenase MOFE cofact 37.6 2.6E+02 0.0088 26.1 11.4 126 55-200 52-200 (458)
140 1wuf_A Hypothetical protein LI 37.3 2.4E+02 0.0081 25.6 12.2 148 47-234 161-314 (393)
141 2cw6_A Hydroxymethylglutaryl-C 36.4 93 0.0032 27.1 7.3 100 114-231 29-142 (298)
142 2qdd_A Mandelate racemase/muco 35.1 2.5E+02 0.0085 25.2 12.3 150 47-233 145-298 (378)
143 3sbf_A Mandelate racemase / mu 34.7 2.6E+02 0.009 25.3 11.9 150 47-232 133-312 (401)
144 1vq8_F 50S ribosomal protein L 34.4 79 0.0027 23.5 5.6 63 160-228 15-77 (120)
145 3o1n_A 3-dehydroquinate dehydr 34.4 2.3E+02 0.0077 24.5 11.4 23 47-69 117-140 (276)
146 3tji_A Mandelate racemase/muco 34.3 2.7E+02 0.0093 25.5 10.5 150 47-232 154-333 (422)
147 2p0o_A Hypothetical protein DU 34.3 2.7E+02 0.0092 25.3 10.9 202 47-291 15-236 (372)
148 3v7q_A Probable ribosomal prot 34.3 84 0.0029 22.6 5.6 62 161-229 6-67 (101)
149 2z61_A Probable aspartate amin 34.1 2.3E+02 0.008 24.6 11.9 147 48-234 44-194 (370)
150 3o85_A Ribosomal protein L7AE; 33.3 81 0.0028 23.7 5.5 64 159-228 16-79 (122)
151 4h83_A Mandelate racemase/muco 33.2 2.7E+02 0.0094 25.1 11.4 145 47-226 164-315 (388)
152 1eye_A DHPS 1, dihydropteroate 33.0 2.4E+02 0.0083 24.4 10.1 104 110-231 28-132 (280)
153 3go2_A Putative L-alanine-DL-g 32.7 2.2E+02 0.0077 25.9 9.6 65 163-229 251-318 (409)
154 2xzm_U Ribosomal protein L7AE 31.5 1.3E+02 0.0044 22.7 6.4 63 161-229 7-73 (126)
155 3fdb_A Beta C-S lyase, putativ 31.4 2.6E+02 0.0088 24.3 13.5 149 48-233 38-193 (377)
156 3ktc_A Xylose isomerase; putat 31.2 49 0.0017 29.2 4.7 62 24-85 5-73 (333)
157 3iz5_f 60S ribosomal protein L 31.0 58 0.002 24.1 4.2 64 159-229 11-74 (112)
158 1w41_A 50S ribosomal protein L 30.8 73 0.0025 22.8 4.7 61 162-229 4-64 (101)
159 1ps9_A 2,4-dienoyl-COA reducta 30.7 2.3E+02 0.0078 27.7 9.8 77 50-131 142-247 (671)
160 3s5s_A Mandelate racemase/muco 30.7 3E+02 0.01 24.8 13.1 153 47-234 144-302 (389)
161 3ff4_A Uncharacterized protein 30.7 97 0.0033 23.2 5.6 20 212-232 94-113 (122)
162 3g0t_A Putative aminotransfera 30.5 2.9E+02 0.01 24.6 15.1 62 172-233 154-225 (437)
163 3rcy_A Mandelate racemase/muco 30.0 3.3E+02 0.011 25.1 13.1 148 47-230 146-312 (433)
164 1qwg_A PSL synthase;, (2R)-pho 29.8 1.6E+02 0.0054 25.3 7.2 77 50-137 86-170 (251)
165 2fc3_A 50S ribosomal protein L 29.7 76 0.0026 23.8 4.8 63 160-228 14-76 (124)
166 1wa3_A 2-keto-3-deoxy-6-phosph 28.6 1.2E+02 0.0041 24.4 6.3 60 160-228 49-109 (205)
167 1z41_A YQJM, probable NADH-dep 28.2 3.1E+02 0.011 24.2 12.6 127 50-197 145-301 (338)
168 3p6l_A Sugar phosphate isomera 27.9 1.5E+02 0.0051 24.6 7.0 33 28-70 11-43 (262)
169 1rlg_A 50S ribosomal protein L 27.9 81 0.0028 23.4 4.7 64 159-228 12-75 (119)
170 3t6c_A RSPA, putative MAND fam 27.8 3.6E+02 0.012 24.8 12.4 67 163-231 280-350 (440)
171 3eeg_A 2-isopropylmalate synth 27.6 3.2E+02 0.011 24.1 10.1 98 113-232 29-144 (325)
172 1tx2_A DHPS, dihydropteroate s 27.4 3.1E+02 0.011 23.9 9.4 64 162-231 103-167 (297)
173 3ik4_A Mandelate racemase/muco 27.4 3.3E+02 0.011 24.3 13.7 153 47-234 143-301 (365)
174 3hgj_A Chromate reductase; TIM 27.3 3.3E+02 0.011 24.2 11.6 88 95-196 218-311 (349)
175 3vcn_A Mannonate dehydratase; 27.2 3.7E+02 0.012 24.7 10.9 150 47-232 150-338 (425)
176 3mkc_A Racemase; metabolic pro 27.1 3.5E+02 0.012 24.4 12.9 145 50-230 160-315 (394)
177 1d2f_A MALY protein; aminotran 26.9 3.2E+02 0.011 23.9 12.9 147 48-234 43-206 (390)
178 2aif_A Ribosomal protein L7A; 26.8 85 0.0029 24.0 4.7 65 159-229 26-90 (135)
179 3va8_A Probable dehydratase; e 26.6 3.6E+02 0.012 25.0 9.9 148 47-234 191-346 (445)
180 2wqp_A Polysialic acid capsule 26.2 3.6E+02 0.012 24.2 9.4 109 46-186 88-218 (349)
181 4eiv_A Deoxyribose-phosphate a 25.7 2E+02 0.0067 25.3 7.2 80 47-129 164-262 (297)
182 1r30_A Biotin synthase; SAM ra 25.4 2.8E+02 0.0096 24.6 8.8 121 156-292 98-231 (369)
183 1zh8_A Oxidoreductase; TM0312, 25.3 2E+02 0.0069 25.2 7.7 85 166-259 35-134 (340)
184 3b46_A Aminotransferase BNA3; 25.2 2.9E+02 0.0099 25.0 9.0 21 213-233 224-244 (447)
185 3u9i_A Mandelate racemase/muco 25.1 3.8E+02 0.013 24.2 12.0 153 47-234 165-331 (393)
186 1u83_A Phosphosulfolactate syn 25.1 3.4E+02 0.011 23.5 9.0 75 50-136 111-193 (276)
187 1kko_A 3-methylaspartate ammon 25.0 3.8E+02 0.013 24.4 9.7 71 160-232 282-361 (413)
188 2akz_A Gamma enolase, neural; 24.7 4E+02 0.014 24.6 9.8 93 110-229 272-369 (439)
189 4djd_C C/Fe-SP, corrinoid/iron 24.7 2.5E+02 0.0087 26.2 8.2 151 53-231 26-209 (446)
190 2ztj_A Homocitrate synthase; ( 24.3 2.4E+02 0.0081 25.6 8.0 94 112-228 25-134 (382)
191 3kax_A Aminotransferase, class 24.3 3.5E+02 0.012 23.4 16.2 149 47-233 38-199 (383)
192 1o94_A Tmadh, trimethylamine d 23.6 4.5E+02 0.015 25.9 10.5 34 163-196 280-314 (729)
193 3t7v_A Methylornithine synthas 23.5 1.6E+02 0.0053 26.1 6.6 119 157-292 91-225 (350)
194 3vdg_A Probable glucarate dehy 23.5 4E+02 0.014 24.6 9.6 147 47-233 193-347 (445)
195 2bas_A YKUI protein; EAL domai 23.4 1.4E+02 0.0047 27.6 6.3 119 95-230 105-234 (431)
196 3ugv_A Enolase; enzyme functio 23.2 4.2E+02 0.014 23.9 10.9 146 47-228 171-326 (390)
197 3ivs_A Homocitrate synthase, m 23.2 2.7E+02 0.0092 25.7 8.2 96 112-230 61-171 (423)
198 3on1_A BH2414 protein; structu 23.1 1.4E+02 0.0049 21.2 5.1 62 161-229 5-66 (101)
199 2w9m_A Polymerase X; SAXS, DNA 23.0 5.1E+02 0.017 24.8 13.2 91 159-260 435-539 (578)
200 1wue_A Mandelate racemase/muco 22.8 4.1E+02 0.014 23.8 11.2 148 47-234 161-314 (386)
201 2ozt_A TLR1174 protein; struct 22.7 3.9E+02 0.013 23.4 13.8 154 48-234 117-276 (332)
202 3dty_A Oxidoreductase, GFO/IDH 22.7 2.8E+02 0.0094 25.0 8.2 83 168-259 33-137 (398)
203 2yr1_A 3-dehydroquinate dehydr 22.5 3.6E+02 0.012 22.9 12.4 122 46-193 97-219 (257)
204 3moi_A Probable dehydrogenase; 22.4 3.1E+02 0.011 24.5 8.5 83 166-259 19-116 (387)
205 2ph5_A Homospermidine synthase 22.4 42 0.0015 31.8 2.5 22 49-70 94-115 (480)
206 3tj4_A Mandelate racemase; eno 22.2 4.2E+02 0.014 23.6 15.6 148 47-230 151-306 (372)
207 4hb7_A Dihydropteroate synthas 22.1 3.8E+02 0.013 23.1 8.8 66 159-230 67-132 (270)
208 3ftb_A Histidinol-phosphate am 22.1 3.7E+02 0.013 23.0 11.8 138 48-233 41-187 (361)
209 3rc1_A Sugar 3-ketoreductase; 21.8 3.3E+02 0.011 23.9 8.5 86 165-259 43-141 (350)
210 3mqt_A Mandelate racemase/muco 21.7 4.4E+02 0.015 23.7 12.5 145 50-230 155-310 (394)
211 3lmz_A Putative sugar isomeras 21.7 2.1E+02 0.0073 23.6 6.8 97 112-232 31-134 (257)
212 3gyc_A Putative glycoside hydr 21.7 34 0.0012 30.6 1.5 40 25-66 13-54 (393)
213 3ks6_A Glycerophosphoryl diest 21.6 1.7E+02 0.0057 24.6 6.1 30 167-196 124-153 (250)
214 4hnl_A Mandelate racemase/muco 21.6 4.6E+02 0.016 23.8 9.8 150 47-232 153-332 (421)
215 3fvs_A Kynurenine--oxoglutarat 21.5 4.2E+02 0.014 23.4 12.6 22 213-234 197-218 (422)
216 3e9m_A Oxidoreductase, GFO/IDH 21.4 3.7E+02 0.013 23.3 8.6 85 166-259 21-119 (330)
217 3qp1_A CVIR transcriptional re 21.3 3E+02 0.01 21.6 8.9 83 108-224 30-130 (182)
218 3g8r_A Probable spore coat pol 21.3 2.7E+02 0.0092 25.1 7.5 108 46-185 75-204 (350)
219 3ri6_A O-acetylhomoserine sulf 21.3 3.5E+02 0.012 24.7 8.7 97 115-234 108-208 (430)
220 3v3w_A Starvation sensing prot 21.1 4.8E+02 0.016 23.8 12.7 150 47-232 149-337 (424)
221 3k30_A Histamine dehydrogenase 20.5 5.5E+02 0.019 25.0 10.4 19 50-68 157-175 (690)
222 4ggi_A UDP-2,3-diacylglucosami 20.4 97 0.0033 27.0 4.3 21 110-130 107-127 (283)
223 4a18_G RPL30; ribosome, eukary 20.3 1.9E+02 0.0065 20.7 5.3 64 159-229 7-70 (104)
224 2dqw_A Dihydropteroate synthas 20.3 3.8E+02 0.013 23.3 8.2 92 122-231 62-154 (294)
225 3ijw_A Aminoglycoside N3-acety 20.1 1.1E+02 0.0039 26.4 4.6 54 113-177 16-70 (268)
No 1
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=100.00 E-value=3.3e-68 Score=496.51 Aligned_cols=313 Identities=43% Similarity=0.772 Sum_probs=277.7
Q ss_pred ccccccceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHH
Q 035739 7 STVFNIPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEAL 86 (335)
Q Consensus 7 ~~~~~m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~ 86 (335)
++.+.|+|++|++ | ++||+||||||++ +.+++.++|+.|++.|||+||||+.||+|+.+|++|++.+
T Consensus 20 ~~~~~m~~~~L~t--g-~~v~~lglGt~~~----------~~~~~~~~v~~Al~~Gi~~~DTA~~YgsE~~lG~al~~~~ 86 (335)
T 3h7u_A 20 HMANAITFFKLNT--G-AKFPSVGLGTWQA----------SPGLVGDAVAAAVKIGYRHIDCAQIYGNEKEIGAVLKKLF 86 (335)
T ss_dssp ----CCCEEECTT--S-CEEESBCEECTTC----------CHHHHHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHHHH
T ss_pred hhccCCceEEcCC--C-CEecceeEeCCcC----------CHHHHHHHHHHHHHcCCCEEECCcccCCHHHHHHHHHHHH
Confidence 4456799999985 9 9999999999985 5678999999999999999999999999999999999987
Q ss_pred HcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 035739 87 RLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAM 166 (335)
Q Consensus 87 ~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 166 (335)
++|.+ +|+++||+||++..+.+++.+++++++||++||+||||+|+||||+...++. .++ ...++......++|++|
T Consensus 87 ~~g~~-~R~~v~I~TK~~~~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~-~~~-~~~~~~~~~~~e~~~aL 163 (335)
T 3h7u_A 87 EDRVV-KREDLFITSKLWCTDHDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGS-VGI-KPENLLPVDIPSTWKAM 163 (335)
T ss_dssp HTTSC-CGGGCEEEEEECGGGCSTTHHHHHHHHHHHHHTCSCBSEEEECSSCEECSSC-SSC-CGGGEECCCHHHHHHHH
T ss_pred hcCCC-CcceeEEEeeeCCCCCCHHHHHHHHHHHHHHcCCCceeEEEEcCCCcccccc-ccc-cccccccCCHHHHHHHH
Confidence 77754 8999999999998888899999999999999999999999999997644321 111 11122235589999999
Q ss_pred HHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCCCCccCC
Q 035739 167 EESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLE 246 (335)
Q Consensus 167 ~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~ 246 (335)
++|+++||||+||||||+.++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++.|..++......
T Consensus 164 ~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~sPL~~g~~~~~~~~~~~ 243 (335)
T 3h7u_A 164 EALYDSGKARAIGVSNFSTKKLADLLELARVPPAVNQVECHPSWRQTKLQEFCKSKGVHLSAYSPLGSPGTTWLKSDVLK 243 (335)
T ss_dssp HHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTCCTTCTTSCCCGGG
T ss_pred HHHHHcCCccEEEecCCCHHHHHHHHHhCCCCeEEEecccccccCCHHHHHHHHHCCCEEEEeccCcCCCCCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999987234444455566
Q ss_pred hHHHHHHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCCCccCCccccCCC-CC
Q 035739 247 NEALKEIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPSDFWVSPQ-GP 325 (335)
Q Consensus 247 ~~~l~~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~~~~~~~~-~~ 325 (335)
.+.+.++|+++|+|++|+||+|++++|++||+|+++++|+++|+++++++|+++|++.|+++..+.+..+.+|..+. .|
T Consensus 244 ~~~l~~iA~~~g~t~aqvaL~w~l~~~~~vI~g~~~~~~l~enl~a~~~~L~~e~~~~i~~l~~~~~~~~~~~~~~~~~p 323 (335)
T 3h7u_A 244 NPILNMVAEKLGKSPAQVALRWGLQMGHSVLPKSTNEGRIKENFNVFDWSIPDYMFAKFAEIEQARLVTGSFLVHETLSP 323 (335)
T ss_dssp CHHHHHHHHHHTCCHHHHHHHHHHHTTCEECCBCSCHHHHHHHHCCSSCCCCHHHHHHGGGSCCCCSCCCGGGBCTTTSS
T ss_pred cHHHHHHHHHHCcCHHHHHHHHHHHCCCEEEeCCCCHHHHHHHHhhCCCCcCHHHHHHHHhHhhcCccccceeccCCCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999988999988877 99
Q ss_pred ccccccccCC
Q 035739 326 FKTLEELWDD 335 (335)
Q Consensus 326 ~~~~~~~~~~ 335 (335)
|++.+++||+
T Consensus 324 ~~~~~~~~~~ 333 (335)
T 3h7u_A 324 YKSIEELWDG 333 (335)
T ss_dssp BSSHHHHTTT
T ss_pred cccccccccc
Confidence 9999999985
No 2
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=100.00 E-value=8e-68 Score=492.95 Aligned_cols=312 Identities=42% Similarity=0.730 Sum_probs=270.2
Q ss_pred CccccccccceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHH
Q 035739 4 STQSTVFNIPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIA 83 (335)
Q Consensus 4 ~~~~~~~~m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~ 83 (335)
.++++.++|+|++|+ | | ++||+||||||. ++.++|+.|++.|||+||||+.||+|+.+|++|+
T Consensus 17 ~~~~~~~~m~~~~L~-t-g-~~vs~lglGt~~--------------~~~~~v~~Al~~Gi~~~DTA~~YgsE~~lG~al~ 79 (331)
T 3h7r_A 17 RGSHMAAPIRFFELN-T-G-AKLPCVGLGTYA--------------MVATAIEQAIKIGYRHIDCASIYGNEKEIGGVLK 79 (331)
T ss_dssp --------CCEEECT-T-S-CEEESBEEECTT--------------CCHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHH
T ss_pred CceecccCCcEEECC-C-C-CEecCEeeccHH--------------HHHHHHHHHHHcCCCEEECccccCCHHHHHHHHH
Confidence 356677889999996 5 9 999999999986 2468999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q 035739 84 EALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVW 163 (335)
Q Consensus 84 ~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (335)
+.+.+|++ +|+++||+||++..+.+++.+++++++||++||+||||+|+||||+...++. ..+ ..++.......++|
T Consensus 80 ~~~~~g~~-~R~~v~I~TK~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~-~~~-~~~~~~~~~~~e~~ 156 (331)
T 3h7r_A 80 KLIGDGFV-KREELFITSKLWSNDHLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKES-LMP-TPEMLTKPDITSTW 156 (331)
T ss_dssp HHHHTTSS-CGGGCEEEEEECGGGCSTTHHHHHHHHHHHHHTCSCBSEEEECCSCEECTTC-SSC-CGGGEECCCHHHHH
T ss_pred HHhhcCCC-CchhEEEEEeeCCCCCCHHHHHHHHHHHHHHcCCCeeEEEEEecCccccccc-ccc-cccccccCCHHHHH
Confidence 87777744 8999999999998888899999999999999999999999999997643321 111 11122235589999
Q ss_pred HHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCCCCc
Q 035739 164 EAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQ 243 (335)
Q Consensus 164 ~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~ 243 (335)
++|++|+++||||+||||||+.++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++.|..+....
T Consensus 157 ~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~g~~~~~~~~ 236 (331)
T 3h7r_A 157 KAMEALYDSGKARAIGVSNFSSKKLTDLLNVARVTPAVNQVECHPVWQQQGLHELCKSKGVHLSGYSPLGSQSKGEVRLK 236 (331)
T ss_dssp HHHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTSCSCTTTTTHH
T ss_pred HHHHHHHHcCCCcEEEecCCCHHHHHHHHHhcCCCceeEEeecccccCCHHHHHHHHHCCCEEEEeCCCCCCCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987233333344
Q ss_pred cCChHHHHHHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCCCccCCccccCCC
Q 035739 244 VLENEALKEIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPSDFWVSPQ 323 (335)
Q Consensus 244 ~~~~~~l~~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~~~~~~~~ 323 (335)
....+.++++|+++|+|++|+||+|++++|++||+|+++++|+++|+++++++|+++|++.|+++..+....++.|+.+.
T Consensus 237 ~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~~vI~g~~~~~~l~en~~a~~~~L~~ee~~~l~~l~~~~~~~~~~~~~~~ 316 (331)
T 3h7r_A 237 VLQNPIVTEVAEKLGKTTAQVALRWGLQTGHSVLPKSSSGARLKENLDVFDWSIPEDLFTKFSNIPQEKFCRATEFAHET 316 (331)
T ss_dssp HHTCHHHHHHHHHHTCCHHHHHHHHHHHTTCEECCCCSCHHHHHHHTCCSSCCCCHHHHGGGGGSCCCCSCCCGGGCCTT
T ss_pred hhcCHHHHHHHHHHCcCHHHHHHHHHHHCCCEEEeCCCCHHHHHHHHhhCCCCcCHHHHHHHHHhhhcCcccCcccccCC
Confidence 45568999999999999999999999999999999999999999999999999999999999999999888887777666
Q ss_pred -CCccccccccCC
Q 035739 324 -GPFKTLEELWDD 335 (335)
Q Consensus 324 -~~~~~~~~~~~~ 335 (335)
.||++.+++||+
T Consensus 317 ~~~~~~~~~~~~~ 329 (331)
T 3h7r_A 317 HGFYKTIEELWDG 329 (331)
T ss_dssp TCSSCSHHHHTTT
T ss_pred CCccccchhhccc
Confidence 999999999986
No 3
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=100.00 E-value=4.8e-67 Score=484.65 Aligned_cols=306 Identities=58% Similarity=0.959 Sum_probs=266.1
Q ss_pred ccceEE-cCC-CCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHc
Q 035739 11 NIPKLK-LSS-SSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRL 88 (335)
Q Consensus 11 ~m~~~~-lg~-t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~ 88 (335)
.|+|++ ||+ | | ++||+|||||+.++. +.+++.++|+.|++.||||||||+.||+|+.||++|++.++.
T Consensus 5 ~m~~~~~l~~~t-g-~~v~~lglGt~~~~~--------~~~~~~~~v~~Al~~G~~~iDTA~~YgsE~~vG~al~~~~~~ 74 (312)
T 1zgd_A 5 EIPTKVLTNTSS-Q-LKMPVVGMGSAPDFT--------CKKDTKDAIIEAIKQGYRHFDTAAAYGSEQALGEALKEAIEL 74 (312)
T ss_dssp CCCEEECTTSTT-C-CEEESBCBCCSCCTT--------CCSCHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHT
T ss_pred CCchhhhcCCCC-C-CCCCceeEcCcccCC--------CHHHHHHHHHHHHHcCCCEEECccccCCHHHHHHHHHHHHhc
Confidence 489999 999 7 9 999999999965432 346788999999999999999999999999999999987666
Q ss_pred CCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 035739 89 GLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEE 168 (335)
Q Consensus 89 g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 168 (335)
|.+ +|+++||+||++..+.+++.+++++++||++||+||||+|+||||+...++...++...+++......++|++|++
T Consensus 75 g~~-~R~~~~i~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~ 153 (312)
T 1zgd_A 75 GLV-TRDDLFVTSKLWVTENHPHLVIPALQKSLKTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLPFDVKGVWESMEE 153 (312)
T ss_dssp TSC-CGGGCEEEEEECGGGCSGGGHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCCCSSEEGGGEECCCHHHHHHHHHH
T ss_pred CCC-cchheEEEeccCCCCCCHHHHHHHHHHHHHHhCCCceeEEEEeccCcccCccccccccccccccccHHHHHHHHHH
Confidence 732 8999999999998778899999999999999999999999999997533221111110111112458899999999
Q ss_pred HHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCCCCccCChH
Q 035739 169 SQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENE 248 (335)
Q Consensus 169 l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~ 248 (335)
|+++||||+||||||+.++++++++.+.++|+++|++||+++++.+++++|+++||++++|+||++ |.+++.......+
T Consensus 154 l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~~~~~~~~~~~~ 232 (312)
T 1zgd_A 154 SLKLGLTKAIGVSNFSVKKLENLLSVATVLPAVNQVEMNLAWQQKKLREFCNAHGIVLTAFSPVRK-GASRGPNEVMEND 232 (312)
T ss_dssp HHHTTSBSCEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTTT-TTTTSSCTTTTCH
T ss_pred HHHcCCCCEEEEeCCCHHHHHHHHHhCCCCceEEeeecCcccCCHHHHHHHHHcCCEEEEecCCCC-CCCCCCccccccH
Confidence 999999999999999999999999988889999999999999999999999999999999999997 8765544555678
Q ss_pred HHHHHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCCCccCCccccCCCCCccc
Q 035739 249 ALKEIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPSDFWVSPQGPFKT 328 (335)
Q Consensus 249 ~l~~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 328 (335)
.+.++|+++|+|++|+||+|+++++++||+|+++++|+++|+++++++|++++++.|+++..+.+..+.+ +|.
T Consensus 233 ~l~~ia~~~g~s~aqvaL~w~l~~~~~~I~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~~~~~~-------~~~ 305 (312)
T 1zgd_A 233 MLKEIADAHGKSVAQISLRWLYEQGVTFVPKSYDKERMNQNLRIFDWSLTKEDHEKIAQIKQNRLIPGPT-------KPG 305 (312)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHTTCEECCCCCSHHHHHHTTCCSSCCCCHHHHHHHTTSCCCCSCCCSE-------ESC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCEEEeCCCCHHHHHHHHHhccCCCCHHHHHHHHHHhccCccCCCC-------CCC
Confidence 9999999999999999999999999999999999999999999999999999999999998877666654 235
Q ss_pred cccccCC
Q 035739 329 LEELWDD 335 (335)
Q Consensus 329 ~~~~~~~ 335 (335)
.++||||
T Consensus 306 ~~~~~~~ 312 (312)
T 1zgd_A 306 LNDLYDD 312 (312)
T ss_dssp CTTTTCC
T ss_pred hHHhccC
Confidence 6799998
No 4
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=100.00 E-value=4.4e-65 Score=474.06 Aligned_cols=306 Identities=31% Similarity=0.585 Sum_probs=265.1
Q ss_pred cccceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcC
Q 035739 10 FNIPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLG 89 (335)
Q Consensus 10 ~~m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g 89 (335)
+.|+|++| +| | ++||+||||||.++ ..+.+++.++|+.|+++||||||||+.||+|+.||++|++.+.+|
T Consensus 4 ~~m~~~~L-~t-g-~~v~~lglGt~~~~-------~~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~~~~~ 73 (324)
T 3ln3_A 4 SXQHCVXL-ND-G-HLIPALGFGTYXPX-------EVPXSXSLEAACLALDVGYRHVDTAYAYQVEEEIGQAIQSXIXAG 73 (324)
T ss_dssp --CCEEEC-TT-S-CEEESSEEECCCCT-------TSCHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTT
T ss_pred cCCceEEC-CC-C-CCcCCeeecCCccc-------CCChHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHhhccC
Confidence 46999999 66 9 99999999999975 247789999999999999999999999999999999999987776
Q ss_pred CCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCC---CCCCCCHHHHHHHH
Q 035739 90 LVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKE---DLLPMDYRGVWEAM 166 (335)
Q Consensus 90 ~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~L 166 (335)
.+ +|+++||+||++....+++.+++++++||++||+||||+|++|||+...+++..++.... .+......++|++|
T Consensus 74 ~~-~R~~~~I~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al 152 (324)
T 3ln3_A 74 VV-XREDLFVTTKLWCTCFRPELVXPALEXSLXXLQLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVDFCDTWERL 152 (324)
T ss_dssp SC-CGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHH
T ss_pred Cc-ccceeEEEeeeCCccCCHHHHHHHHHHHHHHhCCCcceEEEEecCccccccccccccccccccccccCCHHHHHHHH
Confidence 33 899999999999888889999999999999999999999999999875443222111110 12245689999999
Q ss_pred HHHHHcCCccEEEecCccHHHHHHHHHhcCCC--CccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCC----
Q 035739 167 EESQMLGLTKSIGLSNFSRKKIETILTFATIP--PSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYG---- 240 (335)
Q Consensus 167 ~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~--~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~---- 240 (335)
++|+++||||+||||||++++++++++.++++ |+++|++||++.++.+++++|+++||++++|+||++ |.+..
T Consensus 153 ~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-g~~~~~~~~ 231 (324)
T 3ln3_A 153 EECXDAGLVXSIGVSNFNHRQLERILNXPGLXYXPVCNQVECHLYLNQRXLLDYCESXDIVLVAYGALGT-QRYXEWVDQ 231 (324)
T ss_dssp HHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTSC-CCCTTTSCT
T ss_pred HHHHhcCCeeEEEecCCcHHHHHHHHHhcCccCCceeeEeeeCcccchHHHHHHHHHcCCEEEEecCCCC-CCccccccc
Confidence 99999999999999999999999999988776 999999999999999999999999999999999998 76421
Q ss_pred -CCccCChHHHHHHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCCCccCCccc
Q 035739 241 -SNQVLENEALKEIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPSDFW 319 (335)
Q Consensus 241 -~~~~~~~~~l~~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~~~~ 319 (335)
.......+.++++|+++|+|++|+||+|++++|++||+|+++++|+++|+++++++|+++|++.|+++..+.+.....|
T Consensus 232 ~~~~~~~~~~l~~ia~~~g~t~aqvaL~w~l~~~~~~I~g~~~~~~l~en~~~~~~~L~~e~~~~l~~l~~~~r~~~~~~ 311 (324)
T 3ln3_A 232 NSPVLLNDPVLCDVAXXNXRSPALIALRYLIQRGIVPLAQSFXENEMRENLQVFGFQLSPEDMXTLDGLNXNFRYLPAEF 311 (324)
T ss_dssp TSCCGGGCHHHHHHHHHHTSCHHHHHHHHHHHTTCEEEECCSSHHHHHHHGGGGGCCCCHHHHHHHHTTCCCCCSCCCGG
T ss_pred CCcchhcCHHHHHHHHhhCCCHHHHHHHHHHhCCCEEEeCCCCHHHHHHHHhhCCCCcCHHHHHHHHhcccCCcccCchh
Confidence 1123456899999999999999999999999999999999999999999999999999999999999999887775554
Q ss_pred -cCCC-CCcc
Q 035739 320 -VSPQ-GPFK 327 (335)
Q Consensus 320 -~~~~-~~~~ 327 (335)
..|+ .||+
T Consensus 312 ~~~~~~~p~~ 321 (324)
T 3ln3_A 312 LVDHPEYPFV 321 (324)
T ss_dssp GCSSTTCTTS
T ss_pred hhcCCCCCCC
Confidence 4444 8885
No 5
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=100.00 E-value=9.1e-65 Score=464.47 Aligned_cols=282 Identities=37% Similarity=0.675 Sum_probs=256.7
Q ss_pred cccccceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHH
Q 035739 8 TVFNIPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALR 87 (335)
Q Consensus 8 ~~~~m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~ 87 (335)
+...|+|++|++ | ++||.||||||+++ +.+++.++|+.|+++||||||||+.||+|+.+|++++..
T Consensus 9 m~~~~~~v~Ln~--G-~~ip~lGlGtw~~~---------d~~e~~~~v~~Al~~Gin~~DTA~~YgsE~~vG~~l~~~-- 74 (290)
T 4gie_A 9 MNCNYNCVTLHN--S-VRMPQLGLGVWRAQ---------DGAETANAVRWAIEAGYRHIDTAYIYSNERGVGQGIRES-- 74 (290)
T ss_dssp CSSSSCEEECTT--S-CEEESBCEECTTCC---------TTHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHH--
T ss_pred cCCCCCEEEcCC--C-CCccceeEECCCCC---------CHHHHHHHHHHHHHcCCCEEecccccCCHHHHHHHHHhc--
Confidence 345699999976 9 99999999999875 567889999999999999999999999999999999986
Q ss_pred cCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 035739 88 LGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAME 167 (335)
Q Consensus 88 ~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 167 (335)
++ +|++++|+||++....+++.+++++++||+|||+||||+|++|||+.. ...++|++|+
T Consensus 75 -~~--~r~~~~i~tk~~~~~~~~~~~~~~~e~SL~rL~~dyiDly~lH~p~~~-----------------~~~e~~~al~ 134 (290)
T 4gie_A 75 -GV--PREEVWVTTKVWNSDQGYEKTLAAFERSRELLGLEYIDLYLIHWPGKK-----------------KFVDTWKALE 134 (290)
T ss_dssp -CC--CGGGSEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCSS-----------------SHHHHHHHHH
T ss_pred -CC--cchhccccccccccCCChHHHHHHHHHHHHHhCCCceeeEEecCCCCC-----------------cchHHHHHHH
Confidence 66 899999999999888899999999999999999999999999998642 3789999999
Q ss_pred HHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCCCCccCCh
Q 035739 168 ESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLEN 247 (335)
Q Consensus 168 ~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~ 247 (335)
+|+++||||+||||||+++++.++++.+.+.+.++|+++++..++.+++++|+++||++++|+||++ |.+.+ ....
T Consensus 135 ~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~l~~~~~~~gi~~~a~spl~~-G~l~~---~~~~ 210 (290)
T 4gie_A 135 KLYEEKKVRAIGVSNFEPHHLTELFKSCKIRPMVNQVELHPLFQQRTLREFCKQHNIAITAWSPLGS-GEEAG---ILKN 210 (290)
T ss_dssp HHHHTTSEEEEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCS-SGGGC---GGGC
T ss_pred HHHHCCCcceeeecCCCHHHHHHHHHhccCCCceeeEeccccchhHHHHHHHHHcCceEeeeccccc-ccccc---cchh
Confidence 9999999999999999999999999999999999999999999999999999999999999999998 88743 3356
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCCCccCCccccCCCCCcc
Q 035739 248 EALKEIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPSDFWVSPQGPFK 327 (335)
Q Consensus 248 ~~l~~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 327 (335)
+.+.++|+++|+|++|+||+|++++|.+||+|+++++|+++|+++++++||++|++.|+++.++.|... .|...||
T Consensus 211 ~~l~~iA~~~g~t~aqvaL~w~l~~~~v~I~G~~~~~~l~eNl~a~~~~Ls~ee~~~ld~l~~~~r~~~----dP~~~~p 286 (290)
T 4gie_A 211 HVLGEIAKKHNKSPAQVVIRWDIQHGIVTIPKSTNKGRIQENFNVWDFKLTEEEMRQIDELNEDKRIGA----DPDNFFP 286 (290)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHTTCEECCBCCSHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCCSC----CTTTCCT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHhCCCEEEECCCCHHHHHHHHhhcCCCCCHHHHHHHhccCCCCCcCC----CCCCCCC
Confidence 789999999999999999999999999999999999999999999999999999999999988877543 4555555
Q ss_pred cccc
Q 035739 328 TLEE 331 (335)
Q Consensus 328 ~~~~ 331 (335)
..+|
T Consensus 287 ~~~e 290 (290)
T 4gie_A 287 GGEE 290 (290)
T ss_dssp TCC-
T ss_pred CCCC
Confidence 5543
No 6
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=100.00 E-value=4.5e-64 Score=466.84 Aligned_cols=307 Identities=33% Similarity=0.591 Sum_probs=259.8
Q ss_pred cccceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcC
Q 035739 10 FNIPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLG 89 (335)
Q Consensus 10 ~~m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g 89 (335)
+.|++++|+ | | ++||+||||||.++. .+.+++.++|+.|++.||||||||+.||+|+.+|++|++.+++|
T Consensus 3 ~~~~~~~L~-t-g-~~v~~lglGt~~~g~-------~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g 72 (323)
T 1afs_A 3 SISLRVALN-D-G-NFIPVLGFGTTVPEK-------VAKDEVIKATKIAIDNGFRHFDSAYLYEVEEEVGQAIRSKIEDG 72 (323)
T ss_dssp GGGCEEECT-T-S-CEEESSEEECCCCTT-------SCTTHHHHHHHHHHHTTCCEEECCTTTTCHHHHHHHHHHHHHTT
T ss_pred CCCceEECC-C-C-CeECCeeEecccCCC-------CCHHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHHHhcC
Confidence 568999995 5 9 999999999998752 35678899999999999999999999999999999999877667
Q ss_pred CCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCC---CCCCCCHHHHHHHH
Q 035739 90 LVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKE---DLLPMDYRGVWEAM 166 (335)
Q Consensus 90 ~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~L 166 (335)
.+ +|+++||+||++....+++.+++++++||++||+||||+|+||||....+++..++.+.+ .+......++|++|
T Consensus 73 ~~-~R~~~~I~TK~~~~~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~~~~~~~~~~~~e~~~al 151 (323)
T 1afs_A 73 TV-KREDIFYTSKLWSTFHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAM 151 (323)
T ss_dssp SC-CGGGCEEEEEECGGGCSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEECSSSSSSCBCTTCCBCEECCCHHHHHHHH
T ss_pred CC-ChHHeEEEEecCCCcCCHHHHHHHHHHHHHHhCCCceeEEEecCcCcCCCCcccCcccccccccccCCCHHHHHHHH
Confidence 22 899999999998777788999999999999999999999999999643221111110000 00123578999999
Q ss_pred HHHHHcCCccEEEecCccHHHHHHHHHhcCC--CCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCC----
Q 035739 167 EESQMLGLTKSIGLSNFSRKKIETILTFATI--PPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYG---- 240 (335)
Q Consensus 167 ~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~--~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~---- 240 (335)
++|+++||||+||||||+.++++++++.+.+ +|+++|++||++.++.+++++|+++||++++|+||++ |.+.+
T Consensus 152 e~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~ 230 (323)
T 1afs_A 152 EKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQSKMLDYCKSKDIILVSYCTLGS-SRDKTWVDQ 230 (323)
T ss_dssp HHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTSC-CCCTTTSCT
T ss_pred HHHHHcCCcCEEEeeCCCHHHHHHHHHhcCcCCCCEEEeeccccccchHHHHHHHHHcCCEEEEecCccC-Ccccccccc
Confidence 9999999999999999999999999998888 8999999999999999999999999999999999998 87742
Q ss_pred -CCccCChHHHHHHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCCCccCC-cc
Q 035739 241 -SNQVLENEALKEIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPS-DF 318 (335)
Q Consensus 241 -~~~~~~~~~l~~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~-~~ 318 (335)
.......+.++++|+++|+|++|+||+|++++|++||+|+++++|+++|+++++++|++++++.|+++..+.+... ..
T Consensus 231 ~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~~vI~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~~~~~~~ 310 (323)
T 1afs_A 231 KSPVLLDDPVLCAIAKKYKQTPALVALRYQLQRGVVPLIRSFNAKRIKELTQVFEFQLASEDMKALDGLNRNFRYNNAKY 310 (323)
T ss_dssp TSCCGGGCHHHHHHHHHTTCCHHHHHHHHHHHTTCEEEECCSCHHHHHHHTTTTSCCCCHHHHHHHHTTCCCCCSCCCGG
T ss_pred CCcchhcCHHHHHHHHHhCCCHHHHHHHHHHhCCCEEeeCCCCHHHHHHHHhhccCCCCHHHHHHHHhhcccCCccchhh
Confidence 1223456899999999999999999999999999999999999999999999999999999999999988765543 33
Q ss_pred ccCCC-CCccc
Q 035739 319 WVSPQ-GPFKT 328 (335)
Q Consensus 319 ~~~~~-~~~~~ 328 (335)
+..++ .||+.
T Consensus 311 ~~~~~~~~~~~ 321 (323)
T 1afs_A 311 FDDHPNHPFTD 321 (323)
T ss_dssp GTTCTTCCC--
T ss_pred ccCCCCCCCCC
Confidence 33333 57654
No 7
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=100.00 E-value=4e-64 Score=457.06 Aligned_cols=265 Identities=40% Similarity=0.712 Sum_probs=247.6
Q ss_pred cccceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcC
Q 035739 10 FNIPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLG 89 (335)
Q Consensus 10 ~~m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g 89 (335)
..|+|++||+ | ++||+||||||+++ +.+++.++|+.|++.||||||||+.||+|+.+|++|++. +
T Consensus 4 ~~m~~~~L~~--g-~~v~~lglGt~~~~---------~~~~~~~~l~~Al~~G~~~~DTA~~Yg~E~~lG~al~~~---~ 68 (276)
T 3f7j_A 4 SLKDTVKLHN--G-VEMPWFGLGVFKVE---------NGNEATESVKAAIKNGYRSIDTAAIYKNEEGVGIGIKES---G 68 (276)
T ss_dssp STTCEEECTT--S-CEEESBCEECTTCC---------TTHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHH---C
T ss_pred CCcceEECCC--C-CEecceeecCCcCC---------CHHHHHHHHHHHHHcCCCEEECcCcccCHHHHHHHHhhc---C
Confidence 4499999984 9 99999999999875 557899999999999999999999999999999999986 7
Q ss_pred CCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 035739 90 LVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEES 169 (335)
Q Consensus 90 ~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l 169 (335)
+ +|+++||+||++..+.+++.+++++++||++||+||||+|++|||+.. ...++|++|++|
T Consensus 69 ~--~R~~~~i~TK~~~~~~~~~~v~~~~~~SL~rLg~dyiDl~~lH~p~~~-----------------~~~~~~~~l~~l 129 (276)
T 3f7j_A 69 V--AREELFITSKVWNEDQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKD-----------------KYKDTWRALEKL 129 (276)
T ss_dssp S--CGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSS-----------------SHHHHHHHHHHH
T ss_pred C--CcccEEEEEeeCCCCCCHHHHHHHHHHHHHHhCCCeeEEEEEecCCCC-----------------cHHHHHHHHHHH
Confidence 6 899999999999888889999999999999999999999999999642 178999999999
Q ss_pred HHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCCCCccCChHH
Q 035739 170 QMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEA 249 (335)
Q Consensus 170 ~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~ 249 (335)
+++||||+||||||++++++++++..+++|.++|++||++.++.+++++|+++||++++|+||++ |.+. ..+.
T Consensus 130 ~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~l~------~~~~ 202 (276)
T 3f7j_A 130 YKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQKELRDYCKGQGIQLEAWSPLMQ-GQLL------DNEV 202 (276)
T ss_dssp HHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGG-GTTT------TCHH
T ss_pred HHcCCccEEEeccCCHHHHHHHHHhcCCCceeeeeeeccccCCHHHHHHHHHCCCEEEEecCCCC-CccC------CCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998 8653 3478
Q ss_pred HHHHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCCCccC
Q 035739 250 LKEIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIP 315 (335)
Q Consensus 250 l~~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~ 315 (335)
++++|+++|+|++|+||+|++++|.++|+|+++++|+++|+++++++|+++|++.|+++..+.+..
T Consensus 203 l~~ia~~~g~t~aqval~w~l~~~~v~i~g~~~~~~l~en~~a~~~~L~~e~~~~l~~l~~~~r~~ 268 (276)
T 3f7j_A 203 LTQIAEKHNKSVAQVILRWDLQHGVVTIPKSIKEHRIIENADIFDFELSQEDMDKIDALNKDERVG 268 (276)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHTTCEECCBCCSHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCCSS
T ss_pred HHHHHHHhCCCHHHHHHHHHHhCCCEEeeCCCCHHHHHHHHhhCCCCCCHHHHHHHHhhccCCccC
Confidence 999999999999999999999999999999999999999999999999999999999998876653
No 8
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=100.00 E-value=1.4e-63 Score=464.07 Aligned_cols=307 Identities=37% Similarity=0.647 Sum_probs=261.1
Q ss_pred cccceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcC
Q 035739 10 FNIPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLG 89 (335)
Q Consensus 10 ~~m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g 89 (335)
..|++++| +| | ++||+||||||.+++ ..+.+++.++|+.|++.|||+||||+.||+|+.||++|++.+++|
T Consensus 5 ~~~~~~~L-~t-g-~~v~~lglGt~~~g~------~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g 75 (326)
T 3buv_A 5 AASHRIPL-SD-G-NSIPIIGLGTYSEPK------STPKGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEG 75 (326)
T ss_dssp SSCCEEEC-TT-S-CEEESBCEECCCCGG------GCCTTHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTT
T ss_pred CCCCeEEC-CC-C-CeeCCeeEcccCCCC------CCCHHHHHHHHHHHHHcCCCEEECccccCCHHHHHHHHHHHHhcC
Confidence 44789999 55 9 999999999999863 236678899999999999999999999999999999999877667
Q ss_pred CCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCC---CCCCCCHHHHHHHH
Q 035739 90 LVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKE---DLLPMDYRGVWEAM 166 (335)
Q Consensus 90 ~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~L 166 (335)
.+ +|+++||+||++....+++.+++++++||++||+||||+|+||||+...+++..++...+ .+......++|++|
T Consensus 76 ~~-~R~~~~i~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al 154 (326)
T 3buv_A 76 KV-RREDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAM 154 (326)
T ss_dssp SC-CGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHH
T ss_pred CC-ChhHeEEEeeeCCCcCCHHHHHHHHHHHHHHhCCCceeEEEEccCCccCCccccCccccccccccccccHHHHHHHH
Confidence 22 899999999998877889999999999999999999999999999764332211110000 01123578999999
Q ss_pred HHHHHcCCccEEEecCccHHHHHHHHHhcCCC--CccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCC----
Q 035739 167 EESQMLGLTKSIGLSNFSRKKIETILTFATIP--PSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYG---- 240 (335)
Q Consensus 167 ~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~--~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~---- 240 (335)
++|+++||||+||||||+.++++++++.+.++ |+++|++||++.++.+++++|+++||++++|+||++ |.+..
T Consensus 155 e~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~ 233 (326)
T 3buv_A 155 EACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQPKLLKFCQQHDIVITAYSPLGT-SRNPIWVNV 233 (326)
T ss_dssp HHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCC-CCCTTTSCT
T ss_pred HHHHHcCCccEEEEeCCCHHHHHHHHHhCCCCCCCeeeeeecccccCcHHHHHHHHHcCCEEEEeccccC-Ccccccccc
Confidence 99999999999999999999999999988887 999999999999989999999999999999999998 87641
Q ss_pred -CCccCChHHHHHHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCCCccCCc-c
Q 035739 241 -SNQVLENEALKEIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPSD-F 318 (335)
Q Consensus 241 -~~~~~~~~~l~~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~~-~ 318 (335)
.......+.++++|+++|+|++|+||+|++++|++||+|+++++|+++|+++++++|++++++.|+++..+.+.... .
T Consensus 234 ~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~~~I~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~~~~~~~ 313 (326)
T 3buv_A 234 SSPPLLKDALLNSLGKRYNKTAAQIVLRFNIQRGVVVIPKSFNLERIKENFQIFDFSLTEEEMKDIEALNKNVRFVELLM 313 (326)
T ss_dssp TSCCGGGCHHHHHHHHHHTCCHHHHHHHHHHHTTCEECCBCCSHHHHHHHHCCSSCCCCHHHHHHHHTTCCSCCSCCCGG
T ss_pred CCccccccHHHHHHHHHhCCCHHHHHHHHHHhCCCEEEeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhccCCccccchh
Confidence 12234568999999999999999999999999999999999999999999999999999999999999887665432 2
Q ss_pred ccCCC-CCcc
Q 035739 319 WVSPQ-GPFK 327 (335)
Q Consensus 319 ~~~~~-~~~~ 327 (335)
+..++ .||+
T Consensus 314 ~~~~~~~~~~ 323 (326)
T 3buv_A 314 WRDHPEYPFH 323 (326)
T ss_dssp GTTSTTCSSS
T ss_pred ccCCCCCCCC
Confidence 33333 5665
No 9
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=100.00 E-value=1.8e-63 Score=461.57 Aligned_cols=302 Identities=39% Similarity=0.624 Sum_probs=259.0
Q ss_pred cceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcCCC
Q 035739 12 IPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLV 91 (335)
Q Consensus 12 m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g~~ 91 (335)
|++++|.+ | ++||+||||||+. +.+++.++|+.|++.||||||||+.||+|+.||++|++.+.++.+
T Consensus 2 ~~~~~l~t--g-~~v~~lglGt~~~----------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~~~~~~~ 68 (316)
T 3o3r_A 2 TTFVKLRT--K-AKMPLVGLGTWKS----------PPGQVKEAVKAAIDAGYRHFDCAYVYQNESEVGEAIQEKIKEKAV 68 (316)
T ss_dssp CCEEECTT--S-CEEESBEEBCTTC----------CTTHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHHHHTTSC
T ss_pred CCeEECCC--C-CEeCCeeeECCcC----------CcHHHHHHHHHHHHcCCCEEEccCccCCHHHHHHHHHHHHhhCCC
Confidence 57788876 9 9999999999975 346788999999999999999999999999999999987766532
Q ss_pred CCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCC---CCCCCCHHHHHHHHHH
Q 035739 92 SSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKE---DLLPMDYRGVWEAMEE 168 (335)
Q Consensus 92 ~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~L~~ 168 (335)
+|+++||+||+|....+++.+++++++||++||+||||+|+||||+...+++..++.... ........++|++|++
T Consensus 69 -~R~~v~I~TK~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~ 147 (316)
T 3o3r_A 69 -RREDLFIVSKLWSTFFEKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLDAWEGMEE 147 (316)
T ss_dssp -CGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSSCBCCSSCSSCBCTTSCBCBCSCCHHHHHHHHHH
T ss_pred -ChHHcEEEeeeCCCcCCHHHHHHHHHHHHHHcCCCeeeEEEEcCCccccCcccccccccccccccccccHHHHHHHHHH
Confidence 899999999999877889999999999999999999999999999765443222211110 0123558899999999
Q ss_pred HHHcCCccEEEecCccHHHHHHHHHhcCC--CCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcC-C---CC
Q 035739 169 SQMLGLTKSIGLSNFSRKKIETILTFATI--PPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIY-G---SN 242 (335)
Q Consensus 169 l~~~Gkir~iGvs~~~~~~l~~~~~~~~~--~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~-~---~~ 242 (335)
|+++||||+||||||+.++++++++..++ +|+++|++||++.++.+++++|+++||++++|+||++ |... . ..
T Consensus 148 l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~~~~~~~~~~ 226 (316)
T 3o3r_A 148 LVDQGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLTQEKLIQYCHSKGIAVIAYSPLGS-PDRPYAKPEDP 226 (316)
T ss_dssp HHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCCHHHHHHHHTTTCEEEEECTTCC-TTCTTCCTTSC
T ss_pred HHHcCCCcEEEEecCCHHHHHHHHHhCCCCCCceEeeccCCcccchHHHHHHHHHcCCEEEEecccCC-CCCccccccch
Confidence 99999999999999999999999987765 5899999999999999999999999999999999998 7321 1 11
Q ss_pred ccCChHHHHHHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCCCccCCccccC-
Q 035739 243 QVLENEALKEIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPSDFWVS- 321 (335)
Q Consensus 243 ~~~~~~~l~~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~~~~~~- 321 (335)
.....+.++++|+++|+|++|+||+|++++|++||+|+++++|+++|+++++++|+++|++.|+++..+.+.....++.
T Consensus 227 ~~~~~~~l~~ia~~~g~t~aqvaL~w~l~~~~~vi~g~~~~~~l~en~~a~~~~L~~ee~~~l~~l~~~~r~~~~~~~~~ 306 (316)
T 3o3r_A 227 VVLEIPKIKEIAAKHKKTIAQVLIRFHVQRNVAVIPKSVTLSHIKENIQVFDFQLSEEDMAAILSLNRNWRACGLFVTSD 306 (316)
T ss_dssp CSTTCHHHHHHHHHHTCCHHHHHHHHHHTTTCEECCBCCSHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCCCCSCGGGTT
T ss_pred hhhcCHHHHHHHHHhCCCHHHHHHHHHHhCCCEEeCCCCCHHHHHHHHhhCCCCcCHHHHHHHHccccCCcccccccccc
Confidence 2345689999999999999999999999999999999999999999999999999999999999999988776554433
Q ss_pred -CCCCccc
Q 035739 322 -PQGPFKT 328 (335)
Q Consensus 322 -~~~~~~~ 328 (335)
|..||+.
T Consensus 307 ~~~~pf~~ 314 (316)
T 3o3r_A 307 EEDFPFHE 314 (316)
T ss_dssp STTCGGGS
T ss_pred CCCCCCCC
Confidence 3388864
No 10
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=100.00 E-value=1.3e-63 Score=462.71 Aligned_cols=294 Identities=34% Similarity=0.581 Sum_probs=257.0
Q ss_pred cceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcC-C
Q 035739 12 IPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLG-L 90 (335)
Q Consensus 12 m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g-~ 90 (335)
+++++|+ | | ++||+||||||++ +.+++.++|+.|++.|||+||||+.||+|+.||++|++.++.| +
T Consensus 5 ~~~~~l~-~-g-~~vs~lglGt~~~----------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~vG~al~~~~~~~~~ 71 (317)
T 1qwk_A 5 TASIKLS-N-G-VEMPVIGLGTWQS----------SPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKELLEEGVV 71 (317)
T ss_dssp CCEEECT-T-S-CEEESBCEECTTC----------CHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHHTSC
T ss_pred cceEECC-C-C-CEeCCeeEECCcC----------CHHHHHHHHHHHHHcCCCEEEccccccCHHHHHHHHHHHhhcCCC
Confidence 4899995 5 9 9999999999975 5688999999999999999999999999999999999866556 4
Q ss_pred CCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 035739 91 VSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQ 170 (335)
Q Consensus 91 ~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~ 170 (335)
+|+++||+||++..+.+++.+++++++||++||+||||+|+||||+...+++. .+......++|++|++|+
T Consensus 72 --~R~~~~i~TK~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~-------~~~~~~~~e~~~al~~l~ 142 (317)
T 1qwk_A 72 --KREELFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMS-------EHIASPVEDVWRQFDAVY 142 (317)
T ss_dssp --CGGGCEEEEEECTTTSSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEECTTSC-------SEECCCHHHHHHHHHHHH
T ss_pred --ChhheEEEeeeCCCcCCHHHHHHHHHHHHHHhCCCceeEEEEeccCccccccc-------cccCCCHHHHHHHHHHHH
Confidence 89999999999987888999999999999999999999999999975321100 011234889999999999
Q ss_pred HcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCC----------
Q 035739 171 MLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYG---------- 240 (335)
Q Consensus 171 ~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~---------- 240 (335)
++||||+||||||+.++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |.+..
T Consensus 143 ~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~~~~~~~ 221 (317)
T 1qwk_A 143 KAGLAKAVGVSNWNNDQISRALALGLTPVHNSQVELHLYFPQHDHVDFCKKHNISVTSYATLGS-PGRVNFTLPTGQKLD 221 (317)
T ss_dssp HTTSBSSEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCS-CCEECCBCTTCCBCC
T ss_pred HcCCeeEEEecCCCHHHHHHHHHhcCCccceecceeccccCcHHHHHHHHHcCCEEEEecCccC-CCccccccccccccc
Confidence 9999999999999999999999988888999999999999999999999999999999999998 86531
Q ss_pred ---CCccCChHHHHHHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCCCccC-C
Q 035739 241 ---SNQVLENEALKEIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIP-S 316 (335)
Q Consensus 241 ---~~~~~~~~~l~~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~-~ 316 (335)
.......+.+.++|+++|+|++|+||+|++++|++||+|+++++|+++|+++++++|++++++.|+++..+.+.. +
T Consensus 222 ~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~~vI~g~~~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~~~~~~ 301 (317)
T 1qwk_A 222 WAPAPSDLQDQNVLALAEKTHKTPAQVLLRYALDRGCAILPKSIQENRIKENFEVFDFSLTEEDIAKLEESKNSQRLFLQ 301 (317)
T ss_dssp CEECSSGGGCHHHHHHHHHHTCCHHHHHHHHHHHTTCEEECCCCSHHHHHHHHCCSSCCCCHHHHHHHTTTCCCCCSCCC
T ss_pred ccccchhhccHHHHHHHHHHCcCHHHHHHHHHHhCCCeEEeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHHhhcCccccc
Confidence 112334689999999999999999999999999999999999999999999999999999999999998775543 3
Q ss_pred ccccCCC-CCccc
Q 035739 317 DFWVSPQ-GPFKT 328 (335)
Q Consensus 317 ~~~~~~~-~~~~~ 328 (335)
..+..++ .||+.
T Consensus 302 ~~~~~~~~~~~~~ 314 (317)
T 1qwk_A 302 DFMTGHPEDAFAA 314 (317)
T ss_dssp GGGTTCTTCTTGG
T ss_pred hhccCCCCCCCCc
Confidence 4445444 68765
No 11
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=100.00 E-value=1e-63 Score=460.50 Aligned_cols=263 Identities=41% Similarity=0.723 Sum_probs=246.5
Q ss_pred ccceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcCC
Q 035739 11 NIPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGL 90 (335)
Q Consensus 11 ~m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g~ 90 (335)
.|+|++|++ | ++||+||||||+++ +.+++.++|+.|++.|||+||||+.||+|+.+|++|++. ++
T Consensus 39 ~m~~~~L~~--g-~~v~~lglGt~~~~---------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~---~~ 103 (310)
T 3b3e_A 39 LKDTVKLHN--G-VEMPWFGLGVFKVE---------NGNEATESVKAAIKNGYRSIDTAAIYKNEEGVGIGIKES---GV 103 (310)
T ss_dssp TTCEEECTT--S-CEEESBCEECTTCC---------TTHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHS---SS
T ss_pred ccceEECCC--C-CeeCceeeeCCcCC---------CHHHHHHHHHHHHHcCCCEEECCCccCCHHHHHHHHHhc---CC
Confidence 399999984 9 99999999999875 557899999999999999999999999999999999974 66
Q ss_pred CCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 035739 91 VSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQ 170 (335)
Q Consensus 91 ~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~ 170 (335)
+|+++||+||++..+.+++.+++++++||++||+||||+|++|||+.. ...++|++|++|+
T Consensus 104 --~R~~v~I~TK~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~-----------------~~~e~~~al~~l~ 164 (310)
T 3b3e_A 104 --AREELFITSKVWNEDQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKD-----------------KYKDTWRALEKLY 164 (310)
T ss_dssp --CGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSS-----------------CHHHHHHHHHHHH
T ss_pred --CcceEEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCeeEEEEeeCCCcc-----------------cHHHHHHHHHHHH
Confidence 899999999999888889999999999999999999999999999652 1789999999999
Q ss_pred HcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCCCCccCChHHH
Q 035739 171 MLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEAL 250 (335)
Q Consensus 171 ~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l 250 (335)
++||||+||||||++++++++++...++|.++|++||++.++.+++++|+++||++++|+||++ |.+. ..+.+
T Consensus 165 ~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~l~------~~~~l 237 (310)
T 3b3e_A 165 KDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQKELRDYCKGQGIQLEAWSPLMQ-GQLL------DNEVL 237 (310)
T ss_dssp HTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGG-GTTT------TCHHH
T ss_pred HcCCcceEeecCCCHHHHHHHHHhcCCCcceeeeeccCccCCHHHHHHHHHcCCEEEEeccccC-CCcC------CCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998 8654 34789
Q ss_pred HHHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCCCcc
Q 035739 251 KEIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLI 314 (335)
Q Consensus 251 ~~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~ 314 (335)
.++|+++|+|++|+||+|++++|.++|+|+++++|+++|+++++++|+++|++.|+++..+.+.
T Consensus 238 ~~iA~~~g~t~aqvaL~w~l~~~~v~I~gs~~~~~l~en~~a~~~~Ls~ee~~~l~~l~~~~r~ 301 (310)
T 3b3e_A 238 TQIAEKHNKSVAQVILRWDLQHGVVTIPKSIKEHRIIENADIFDFELSQEDMDKIDALNKDERV 301 (310)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHTTCEECCBCCSHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCCS
T ss_pred HHHHHHhCCCHHHHHHHHHHcCCCeEEeCCCCHHHHHHHHHhccCCCCHHHHHHHHhhhhCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999887665
No 12
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=100.00 E-value=4.4e-64 Score=457.85 Aligned_cols=263 Identities=39% Similarity=0.711 Sum_probs=242.6
Q ss_pred cccccccceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHH
Q 035739 6 QSTVFNIPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEA 85 (335)
Q Consensus 6 ~~~~~~m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~ 85 (335)
.++.++|+|++|++ | ++||+||||||++ +.+++.++|+.|++.|||+||||+.||+|+.+|++|++.
T Consensus 20 ~~~~~~m~~~~L~~--g-~~v~~lglGt~~~----------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~ 86 (283)
T 3o0k_A 20 GSMIMTVPTVKLND--G-NHIPQLGYGVWQI----------SNDEAVSAVSEALKAGYRHIDTATIYGNEEGVGKAINGS 86 (283)
T ss_dssp -CEECCCCEEECTT--S-CEEESBCEECCSC----------CHHHHHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHTS
T ss_pred ccccCCCceEECCC--C-CEECCeeEECccC----------CHHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHc
Confidence 45567799999954 9 9999999999987 457899999999999999999999999999999999964
Q ss_pred HHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 035739 86 LRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEA 165 (335)
Q Consensus 86 ~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (335)
++ +|+++||+||++..+.+++.+++++++||++||+||||+|++|||+... ....++|++
T Consensus 87 ---~~--~R~~~~i~TK~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~---------------~~~~e~~~a 146 (283)
T 3o0k_A 87 ---GI--ARADIFLTTKLWNSDQGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPSK---------------DLFMETWRA 146 (283)
T ss_dssp ---SS--CGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTSSCEEEEEECCSCSCH---------------HHHHHHHHH
T ss_pred ---CC--CcccEEEEEccCCCCCCHHHHHHHHHHHHHHhCCCceeEEEECCCCCCc---------------ccHHHHHHH
Confidence 65 8999999999998778899999999999999999999999999996531 126899999
Q ss_pred HHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCCCCccC
Q 035739 166 MEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVL 245 (335)
Q Consensus 166 L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~~~ 245 (335)
|++|+++||||+||||||+.++++++++..+++|.++|++||++.++.+++++|+++||++++|+||++ |.+.
T Consensus 147 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~l~------ 219 (283)
T 3o0k_A 147 FIKLKEEGRVKSIGVSNFRTADLERLIKESGVTPVLNQIELHPQFQQDELRLFHGKHDIATEAWSPLGQ-GKLL------ 219 (283)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCC-C-CT------
T ss_pred HHHHHHCCCcceEEeccCcHHHHHHHHHhCCCCeEEEEeecCcccCcHHHHHHHHHCCcEEEEecCCCC-Cccc------
Confidence 999999999999999999999999999988888999999999999999999999999999999999998 7653
Q ss_pred ChHHHHHHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhcc
Q 035739 246 ENEALKEIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQI 308 (335)
Q Consensus 246 ~~~~l~~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~ 308 (335)
..+.+.++|+++|+|++|+||+|++++|.+||+|+++++|+++|+++++++|+++|++.|+++
T Consensus 220 ~~~~l~~ia~~~g~t~aqvaL~w~l~~~~v~I~g~~~~~~l~en~~a~~~~Ls~ee~~~i~~l 282 (283)
T 3o0k_A 220 EDPTLKSIAEKHAKSVAQIILRWHIETGNIVIPKSITPARIKENFDIFDFTLNGTDHDAITKL 282 (283)
T ss_dssp TCHHHHHHHHHHTSCHHHHHHHHHHHHTCEECCCCCSHHHHHHHHCCSSCCCCHHHHHHHHTT
T ss_pred cchHHHHHHHHhCCCHHHHHHHHHHHCCCEEEeCCCCHHHHHHHHHhCCCCCCHHHHHHHhcc
Confidence 357899999999999999999999999988999999999999999999999999999999987
No 13
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=100.00 E-value=8.8e-64 Score=456.05 Aligned_cols=272 Identities=35% Similarity=0.653 Sum_probs=244.0
Q ss_pred CCCCccccccccceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHH
Q 035739 1 MDSSTQSTVFNIPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGE 80 (335)
Q Consensus 1 ~~~~~~~~~~~m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~ 80 (335)
|++| ++....|++++| +| | ++||+||||||+++ .+++.++|+.|++.||||||||+.||+|+.||+
T Consensus 1 ~~~~-~~~~~~m~~~~l-~~-g-~~v~~lglGt~~~~----------~~~~~~~v~~Al~~Gi~~iDTA~~Yg~E~~lG~ 66 (283)
T 2wzm_A 1 MTAS-HGQAAAIPTVTL-ND-D-NTLPVVGIGVGELS----------DSEAERSVSAALEAGYRLIDTAAAYGNEAAVGR 66 (283)
T ss_dssp ----------CCCEEEC-TT-S-CEEESEEEECTTCC----------HHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHH
T ss_pred CCCC-CCCCCCCceEEC-CC-C-CEEcceeEECCCCC----------hHHHHHHHHHHHHcCCCEEECCCcccCHHHHHH
Confidence 5444 445677999999 66 9 99999999999874 378899999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHH
Q 035739 81 AIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYR 160 (335)
Q Consensus 81 ~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~ 160 (335)
+|++. ++ +|+++||+||++..+.+++.+++++++||++||+||||+|++|||+.. .....
T Consensus 67 al~~~---~~--~R~~v~i~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~---------------~~~~~ 126 (283)
T 2wzm_A 67 AIAAS---GI--PRDEIYVTTKLATPDQGFTSSQAAARASLERLGLDYVDLYLIHWPGGD---------------TSKYV 126 (283)
T ss_dssp HHHHT---CC--CGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCCTTC---------------HHHHH
T ss_pred HHHhc---CC--CcccEEEEeccCCCCCCHHHHHHHHHHHHHHhCCCCEeEEEEcCCCCC---------------CCCHH
Confidence 99974 66 899999999998877889999999999999999999999999999642 01267
Q ss_pred HHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCC
Q 035739 161 GVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYG 240 (335)
Q Consensus 161 ~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~ 240 (335)
++|++|++|+++||||+||||||++++++++++.++++|+++|++||+++++.+++++|+++||++++|+||++ |.+
T Consensus 127 e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~l-- 203 (283)
T 2wzm_A 127 DSWGGLMKVKEDGIARSIGVCNFGAEDLETIVSLTYFTPAVNQIELHPLLNQAALREVNAGYNIVTEAYGPLGV-GRL-- 203 (283)
T ss_dssp HHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEECTTTT-TGG--
T ss_pred HHHHHHHHHHHcCCccEEEEcCCCHHHHHHHHHhcCCCcccccccCCcccCCHHHHHHHHHCCCEEEEecCCCC-Ccc--
Confidence 99999999999999999999999999999999999889999999999999999999999999999999999998 744
Q ss_pred CCccCChHHHHHHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCCCc
Q 035739 241 SNQVLENEALKEIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRL 313 (335)
Q Consensus 241 ~~~~~~~~~l~~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~ 313 (335)
+..+.++++|+++|+|++|+||+|++++|+++|+|+++++|+++|+++++++|++++++.|+++..+.+
T Consensus 204 ----~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~~~I~g~~~~~~l~en~~~~~~~L~~~~~~~l~~~~~~~~ 272 (283)
T 2wzm_A 204 ----LDHPAVTAIAEAHGRTAAQVLLRWSIQLGNVVISRSANPERIASNLDVFGFELTADEMETLNGLDDGTR 272 (283)
T ss_dssp ----GGCHHHHHHHHHHTCCHHHHHHHHHHHTTCEEEECCSSHHHHHHHHCCSSCCCCHHHHHHHHTCCCCCC
T ss_pred ----cchHHHHHHHHHhCCCHHHHHHHHHHHCCCEEEeCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHhhcCC
Confidence 345789999999999999999999999999999999999999999999999999999999999987654
No 14
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=100.00 E-value=3e-63 Score=462.71 Aligned_cols=306 Identities=37% Similarity=0.598 Sum_probs=258.3
Q ss_pred cccceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcC
Q 035739 10 FNIPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLG 89 (335)
Q Consensus 10 ~~m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g 89 (335)
+.+++++|+ | | ++||+||||||.++. .+.+++.++|+.|++.|||+||||+.||+|+.||++|++.+++|
T Consensus 3 ~~~~~~~L~-t-g-~~v~~lglGt~~~~~-------~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~~ 72 (331)
T 1s1p_A 3 SKQQCVKLN-D-G-HFMPVLGFGTYAPPE-------VPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADG 72 (331)
T ss_dssp ---CEEECT-T-S-CEEESEEEECCCCTT-------SCTTHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTT
T ss_pred CCCCeEECC-C-C-CEeCCeeEcCccCCC-------CCHHHHHHHHHHHHHcCCCEEEccccccCHHHHHHHHHHHHhcC
Confidence 457899994 5 9 999999999998752 35678899999999999999999999999999999999877666
Q ss_pred -CCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCC---CCCCCCHHHHHHH
Q 035739 90 -LVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKE---DLLPMDYRGVWEA 165 (335)
Q Consensus 90 -~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 165 (335)
+ +|+++||+||++....+++.+++++++||++||+||||+|+||||....+++..++.+.+ .+......++|++
T Consensus 73 ~~--~R~~~~I~TK~~~~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~g~~~~~~~~~~e~~~a 150 (331)
T 1s1p_A 73 SV--KREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEA 150 (331)
T ss_dssp SC--CGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCSSCSSCBCTTSCBCBCCCCHHHHHHH
T ss_pred CC--CchheEEEeccCCccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCcccCCCcccCCccccccccccccCHHHHHHH
Confidence 5 899999999998777889999999999999999999999999999654332211110000 0112357899999
Q ss_pred HHHHHHcCCccEEEecCccHHHHHHHHHhcCC--CCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCC---
Q 035739 166 MEESQMLGLTKSIGLSNFSRKKIETILTFATI--PPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYG--- 240 (335)
Q Consensus 166 L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~--~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~--- 240 (335)
|++|+++||||+||||||+.++++++++.+.+ +|+++|++||++.++.+++++|+++||++++|+||++ |.+++
T Consensus 151 le~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~v~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~ 229 (331)
T 1s1p_A 151 MEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNRSKLLDFCKSKDIVLVAYSALGS-QRDKRWVD 229 (331)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTSC-CCCTTTSC
T ss_pred HHHHHHcCCccEEEEeCCCHHHHHHHHHhcCccCCCceeeeecCCCcChHHHHHHHHHcCCEEEEeccccC-Cccccccc
Confidence 99999999999999999999999999998888 8999999999999999999999999999999999998 87742
Q ss_pred --CCccCChHHHHHHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCCCccCC-c
Q 035739 241 --SNQVLENEALKEIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPS-D 317 (335)
Q Consensus 241 --~~~~~~~~~l~~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~-~ 317 (335)
.......+.++++|+++|+|++|+||+|++++|++||+|+++++|+++|+++++++|++++++.|+++..+.+... .
T Consensus 230 ~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~~vI~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~~~~~~ 309 (331)
T 1s1p_A 230 PNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTAEDMKAIDGLDRNLHYFNSD 309 (331)
T ss_dssp TTSCCGGGCHHHHHHHHHHTSCHHHHHHHHHHHTTCEEEEECCSHHHHHHHGGGGGCCCCHHHHHHHHTTCCCCCSCCCH
T ss_pred CCCcccccCHHHHHHHHHhCCCHHHHHHHHHHhCCCEEeeCCCCHHHHHHHhhhcCCCcCHHHHHHHHHHhcCCcccchh
Confidence 1223456899999999999999999999999999999999999999999999999999999999999988755433 2
Q ss_pred cccCCC-CCccc
Q 035739 318 FWVSPQ-GPFKT 328 (335)
Q Consensus 318 ~~~~~~-~~~~~ 328 (335)
.|..++ .||++
T Consensus 310 ~~~~~~~~~~~~ 321 (331)
T 1s1p_A 310 SFASHPNYPYSD 321 (331)
T ss_dssp HHHTSTTCCCC-
T ss_pred hccCCCCCCCcH
Confidence 333333 56654
No 15
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=100.00 E-value=1.9e-63 Score=465.05 Aligned_cols=306 Identities=37% Similarity=0.744 Sum_probs=260.6
Q ss_pred cccccc-ceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHH-cCCCEeeCCCCcCCHHHHHHHHHH
Q 035739 7 STVFNI-PKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIK-LGYRHFDTAAMYGTEKALGEAIAE 84 (335)
Q Consensus 7 ~~~~~m-~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~-~Gin~~DtA~~Ygse~~lG~~l~~ 84 (335)
+..+.| ++++|+ | | ++||+||||||+. + +++.++|+.|++ .|||+||||+.||+|+.||++|++
T Consensus 31 ~~~~~m~~~~~L~-t-g-~~vp~lglGt~~~----------~-~~~~~~l~~Al~~~Gi~~iDTA~~Yg~E~~vG~al~~ 96 (344)
T 2bgs_A 31 TMGQGEQDHFVLK-S-G-HAMPAVGLGTWRA----------G-SDTAHSVRTAITEAGYRHVDTAAEYGVEKEVGKGLKA 96 (344)
T ss_dssp ------CCEEECT-T-S-CEEESBCEECTTC----------G-GGHHHHHHHHHHTTCCCEEECCGGGTCHHHHHHHHHH
T ss_pred hhcccCCceEECC-C-C-CccCCeeEeCCCC----------c-HHHHHHHHHHHHhcCCCEEECCCccCCHHHHHHHHHH
Confidence 333446 488995 5 9 9999999999873 4 678899999999 999999999999999999999998
Q ss_pred HHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q 035739 85 ALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWE 164 (335)
Q Consensus 85 ~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (335)
.+..|+ +|+++||+||++....+++.+++++++||++||+||||+|+||||+...+++..++.. ..+......++|+
T Consensus 97 ~~~~g~--~R~~v~I~TK~~~~~~~~~~v~~ale~SL~rLg~dyIDl~llH~p~~~~~~~~~~~~~-~~~~~~~~~e~~~ 173 (344)
T 2bgs_A 97 AMEAGI--DRKDLFVTSKIWCTNLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEA-GEVLEFDMEGVWK 173 (344)
T ss_dssp HHHTTC--CGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESSSCEECTTCCSSCCT-TCEECCCHHHHHH
T ss_pred hhhcCC--CcccEEEEeccCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCcccccccccccc-ccccCCCHHHHHH
Confidence 776676 8999999999988778899999999999999999999999999996532211111100 0011235789999
Q ss_pred HHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCCCCcc
Q 035739 165 AMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQV 244 (335)
Q Consensus 165 ~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~~ 244 (335)
+|++|+++||||+||||||+.++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |. ...
T Consensus 174 aLe~l~~~GkIr~iGvSn~~~~~l~~~~~~~~i~p~v~Q~e~~~~~~~~~ll~~~~~~gI~v~a~spL~~-G~----~~~ 248 (344)
T 2bgs_A 174 EMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWKNDKIFEACKKHGIHITAYSPLGS-SE----KNL 248 (344)
T ss_dssp HHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCT-TT----TCC
T ss_pred HHHHHHHcCCccEEEEecCCHHHHHHHHHhcCCCceeeecccCcccCcHHHHHHHHHCCCEEEEeCcccC-CC----chh
Confidence 9999999999999999999999999999999989999999999999999999999999999999999998 62 223
Q ss_pred CChHHHHHHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCCCccCC-c-cccCC
Q 035739 245 LENEALKEIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPS-D-FWVSP 322 (335)
Q Consensus 245 ~~~~~l~~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~-~-~~~~~ 322 (335)
...+.++++|+++|+|++|+||+|++++|++||+|+++++||++|+++++++|++++++.|+++..+.+... . .+..|
T Consensus 249 ~~~~~l~~iA~~~g~s~aqvaL~w~l~~~~~vI~gs~~~~~l~eNl~a~~~~Ls~ee~~~l~~l~~~~~~~~~~~~~~~~ 328 (344)
T 2bgs_A 249 AHDPVVEKVANKLNKTPGQVLIKWALQRGTSVIPKSSKDERIKENIQVFGWEIPEEDFKVLCSIKDEKRVLTGEELFVNK 328 (344)
T ss_dssp TTCHHHHHHHHHHTCCHHHHHHHHHHHHTCEECCBCSSHHHHHHTTCCSSCCCCHHHHHHHHHSCTTCCSCCCHHHHBCT
T ss_pred hccHHHHHHHHHhCCCHHHHHHHHHHhCCCeEEECCCCHHHHHHHHHhcCCCCCHHHHHHHHHHhhcCCccchhhhhcCC
Confidence 456899999999999999999999999999999999999999999999999999999999999988766543 2 34455
Q ss_pred C-CCccccccccC
Q 035739 323 Q-GPFKTLEELWD 334 (335)
Q Consensus 323 ~-~~~~~~~~~~~ 334 (335)
. .||++..|+|+
T Consensus 329 ~~~~~~~~~~~~~ 341 (344)
T 2bgs_A 329 THGPYRSARDVWD 341 (344)
T ss_dssp TTCSBCSHHHHTT
T ss_pred cCCCCCchhhccc
Confidence 5 69998888997
No 16
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=100.00 E-value=1.6e-63 Score=453.55 Aligned_cols=265 Identities=38% Similarity=0.705 Sum_probs=238.3
Q ss_pred cccceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcC
Q 035739 10 FNIPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLG 89 (335)
Q Consensus 10 ~~m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g 89 (335)
|.|+|++| +| | ++||+||||||+++ .+++.++|+.|++.||||||||+.||+|+.||++|++. |
T Consensus 1 m~M~~~~l-~~-g-~~v~~lglGt~~~~----------~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~---~ 64 (278)
T 1hw6_A 1 MTVPSIVL-ND-G-NSIPQLGYGVFKVP----------PADTQRAVEEALEVGYRHIDTAAIYGNEEGVGAAIAAS---G 64 (278)
T ss_dssp -CCCEEEC-TT-S-CEEESBCEECCSCC----------GGGHHHHHHHHHHHTCCEEECGGGTTCCHHHHHHHHHH---C
T ss_pred CCCceEEC-CC-C-CccCCeeEECCcCC----------hHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHc---C
Confidence 45899999 66 9 99999999999874 26788999999999999999999999999999999975 7
Q ss_pred CCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 035739 90 LVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEES 169 (335)
Q Consensus 90 ~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l 169 (335)
+ +|+++||+||++..+.+++.+++++++||++||+||||+|++|||+.. .....++|++|++|
T Consensus 65 ~--~R~~~~i~TK~~~~~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~---------------~~~~~e~~~al~~l 127 (278)
T 1hw6_A 65 I--ARDDLFITTKLWNDRHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPA---------------ADNYVHAWEKMIEL 127 (278)
T ss_dssp C--CGGGCEEEEEECCC-----CHHHHHHHHHHHHTCSCEEEEEECCCCTT---------------CSSHHHHHHHHHHH
T ss_pred C--ChhhEEEEEeeCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEEcCCCCC---------------CCCHHHHHHHHHHH
Confidence 6 899999999999878889999999999999999999999999999652 12378999999999
Q ss_pred HHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCCCCccCChHH
Q 035739 170 QMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEA 249 (335)
Q Consensus 170 ~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~ 249 (335)
+++||||+||||||++++++++++.+.++|.++|++||++.++.+++++|+++||++++|+||++ |. ..++..+.
T Consensus 128 ~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~----~~~~~~~~ 202 (278)
T 1hw6_A 128 RAAGLTRSIGVSNHLVPHLERIVAATGVVPAVNQIELHPAYQQREITDWAAAHDVKIESWGPLGQ-GK----YDLFGAEP 202 (278)
T ss_dssp HHTTSEEEEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTGG-GS----SCCTTSHH
T ss_pred HHcCCccEEEecCCCHHHHHHHHHhcCCCceeEEEEeCcccCCHHHHHHHHHcCCEEEEeccccC-CC----ccccccHH
Confidence 99999999999999999999999998888999999999999999999999999999999999998 73 12345678
Q ss_pred HHHHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCCC
Q 035739 250 LKEIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHR 312 (335)
Q Consensus 250 l~~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~ 312 (335)
++++|+++|+|++|+||+|++++++++|+|+++++|+++|+++++++|+++|++.|+++..+.
T Consensus 203 l~~ia~~~g~s~aqvaL~w~l~~~v~~I~g~~~~~~l~en~~~~~~~L~~~~~~~l~~~~~~~ 265 (278)
T 1hw6_A 203 VTAAAAAHGKTPAQAVLRWHLQKGFVVFPKSVRRERLEENLDVFDFDLTDTEIAAIDAMDPGD 265 (278)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHTTCBBCCCCCSHHHHHHHHCCSSCCCCHHHHHHHHTTCC--
T ss_pred HHHHHHHhCCCHHHHHHHHHHHCCCEEEcCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhhccC
Confidence 999999999999999999999999999999999999999999999999999999999997654
No 17
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=2.8e-63 Score=452.27 Aligned_cols=266 Identities=41% Similarity=0.706 Sum_probs=245.7
Q ss_pred ccccccceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHH
Q 035739 7 STVFNIPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEAL 86 (335)
Q Consensus 7 ~~~~~m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~ 86 (335)
+.+..|+|++| +| | ++||+||||||+++ +.+++.++|+.|++.|||+||||+.||+|+.+|++|++.
T Consensus 4 ~~~~~m~~~~l-~~-g-~~v~~lglGt~~~~---------~~~~~~~~v~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~- 70 (281)
T 1vbj_A 4 EFMALTQSLKL-SN-G-VMMPVLGFGMWKLQ---------DGNEAETATMWAIKSGYRHIDTAAIYKNEESAGRAIASC- 70 (281)
T ss_dssp TTTCCCCEEEC-TT-S-CEEESBCEECTTCC---------TTHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHS-
T ss_pred CcCCCCceEEC-CC-C-CeecCeeEECCcCC---------CHHHHHHHHHHHHHcCCCEEECCcccCCHHHHHHHHHhc-
Confidence 34556999999 55 9 99999999999875 457889999999999999999999999999999999974
Q ss_pred HcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 035739 87 RLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAM 166 (335)
Q Consensus 87 ~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 166 (335)
++ +|+++||+||++..+.+++.+++++++||++||+||||+|++|||+ .. ...++|++|
T Consensus 71 --~~--~R~~~~i~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~~lH~p~-~~----------------~~~~~~~al 129 (281)
T 1vbj_A 71 --GV--PREELFVTTKLWNSDQGYESTLSAFEKSIKKLGLEYVDLYLIHWPG-KD----------------KFIDTWKAF 129 (281)
T ss_dssp --SS--CGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCBSEEEESCCC-SS----------------CHHHHHHHH
T ss_pred --CC--ChhHEEEEeccCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEcCCC-CC----------------CHHHHHHHH
Confidence 65 7999999999998778899999999999999999999999999996 21 278999999
Q ss_pred HHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCCCCccCC
Q 035739 167 EESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLE 246 (335)
Q Consensus 167 ~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~ 246 (335)
++|+++||||+||||||++++++++++.++++|.++|++||++.++.+++++|+++||++++|+||++ |.+ +.
T Consensus 130 ~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~~------~~ 202 (281)
T 1vbj_A 130 EKLYADKKVRAIGVSNFHEHHIEELLKHCKVAPMVNQIELHPLLNQKALCEYCKSKNIAVTAWSPLGQ-GHL------VE 202 (281)
T ss_dssp HHHHHTTSBSCEEEESCCHHHHHHHHTSCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTGG-GTT------TT
T ss_pred HHHHHCCCccEEEeeCCCHHHHHHHHHhCCCCceeeeEEeccccCCHHHHHHHHHcCCEEEEecCCcC-CCC------CC
Confidence 99999999999999999999999999988888999999999999999999999999999999999998 743 34
Q ss_pred hHHHHHHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCCCc
Q 035739 247 NEALKEIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRL 313 (335)
Q Consensus 247 ~~~l~~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~ 313 (335)
.+.++++|+++|+|++|+||+|++++++++|+|+++++|+++|+++++++|++++++.|+++..+.+
T Consensus 203 ~~~l~~ia~~~g~s~aqvaL~w~l~~~~~~I~g~~~~~~l~en~~a~~~~L~~e~~~~l~~~~~~~~ 269 (281)
T 1vbj_A 203 DARLKAIGGKYGKTAAQVMLRWEIQAGVITIPKSGNEARIKENGNIFDFELTAEDIQVIDGMNAGHR 269 (281)
T ss_dssp CHHHHHHHHTTTCCHHHHHHHHHHHTTCEECCBCSCHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCC
T ss_pred CHHHHHHHHHhCCCHHHHHHHHHHHCCCEEecCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhhccCC
Confidence 5789999999999999999999999999999999999999999999999999999999999987654
No 18
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=100.00 E-value=1.2e-62 Score=456.05 Aligned_cols=301 Identities=39% Similarity=0.653 Sum_probs=256.4
Q ss_pred cceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcCCC
Q 035739 12 IPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLV 91 (335)
Q Consensus 12 m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g~~ 91 (335)
+++++| +| | ++||+||||||+. +.+++.++|+.|++.|||+||||+.||+|+.+|++|++.+.+|.+
T Consensus 2 ~~~~~l-~t-g-~~v~~lglGt~~~----------~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~ 68 (316)
T 1us0_A 2 ASRILL-NN-G-AKMPILGLGTWKS----------PPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVV 68 (316)
T ss_dssp CSEEEC-TT-S-CEEESBCEECTTC----------CHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSS
T ss_pred CceEEC-CC-C-CEECCEeEECCcC----------CHHHHHHHHHHHHHcCCCEEEcccccCCHHHHHHHHHHHHhcCCC
Confidence 357889 45 9 9999999999874 568899999999999999999999999999999999987766722
Q ss_pred CCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCC---CCCCCHHHHHHHHHH
Q 035739 92 SSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKED---LLPMDYRGVWEAMEE 168 (335)
Q Consensus 92 ~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~L~~ 168 (335)
+|+++||+||++....+++.+++++++||++||+||||+|+||||+...+++..++...+. +......++|++|++
T Consensus 69 -~R~~~~I~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~ 147 (316)
T 1us0_A 69 -KREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEE 147 (316)
T ss_dssp -CGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBCCSSCSSCBCTTSCBCBCSCCHHHHHHHHHH
T ss_pred -ChhHeEEEEeeCCCcCCHHHHHHHHHHHHHHhCCCceeeEEEecCccccccccccccccccccccccccHHHHHHHHHH
Confidence 8999999999988778899999999999999999999999999997643222111100000 012357899999999
Q ss_pred HHHcCCccEEEecCccHHHHHHHHHhcCC--CCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcC-C---CC
Q 035739 169 SQMLGLTKSIGLSNFSRKKIETILTFATI--PPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIY-G---SN 242 (335)
Q Consensus 169 l~~~Gkir~iGvs~~~~~~l~~~~~~~~~--~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~-~---~~ 242 (335)
|+++||||+||||||+.++++++++.+.+ +|+++|++||++.++.+++++|+++||++++|+||++ |.+. . ..
T Consensus 148 l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~~~ 226 (316)
T 1us0_A 148 LVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGS-PDRPWAKPEDP 226 (316)
T ss_dssp HHHTTSBSCEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCC-TTCTTCCTTSC
T ss_pred HHHCCCccEEEEecCCHHHHHHHHHhCcccCCceeeehhcCCccCCHHHHHHHHHcCCEEEEeccccc-CccccccCCCc
Confidence 99999999999999999999999998888 8999999999999999999999999999999999998 8642 1 12
Q ss_pred ccCChHHHHHHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCCCccCCcc-ccC
Q 035739 243 QVLENEALKEIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIPSDF-WVS 321 (335)
Q Consensus 243 ~~~~~~~l~~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~~~~-~~~ 321 (335)
.....+.++++|+++|+|++|+||+|++++|++||+|+++++|+++|+++++++|++++++.|+++..+.+..... +..
T Consensus 227 ~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~~~I~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~~~~~~~~~~~~ 306 (316)
T 1us0_A 227 SLLEDPRIKAIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVCALLSCTS 306 (316)
T ss_dssp CTTTCHHHHHHHHHHTCCHHHHHHHHHHHTTCEECCBCCCHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCSCCCGGGTT
T ss_pred ccccCHHHHHHHHHhCCCHHHHHHHHHHHCCCEEEeCCCCHHHHHHHhhhcCCCCCHHHHHHHHhhccCCccccchhccC
Confidence 2345689999999999999999999999999999999999999999999999999999999999998876654333 333
Q ss_pred CC-CCcc
Q 035739 322 PQ-GPFK 327 (335)
Q Consensus 322 ~~-~~~~ 327 (335)
++ .||+
T Consensus 307 ~~~~~~~ 313 (316)
T 1us0_A 307 HKDYPFH 313 (316)
T ss_dssp STTCCCC
T ss_pred CCCCCCC
Confidence 32 5665
No 19
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=100.00 E-value=4.3e-63 Score=460.22 Aligned_cols=291 Identities=38% Similarity=0.609 Sum_probs=252.1
Q ss_pred cccceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcC
Q 035739 10 FNIPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLG 89 (335)
Q Consensus 10 ~~m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g 89 (335)
..|++++|+ | | ++||+||||||+. +.+++.++|+.|++.||||||||+.||+|+.||++|++.+..|
T Consensus 3 ~~m~~~~L~-t-g-~~v~~lglGt~~~----------~~~~~~~~v~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g 69 (322)
T 1mi3_A 3 ASIPDIKLS-S-G-HLMPSIGFGCWKL----------ANATAGEQVYQAIKAGYRLFDGAEDYGNEKEVGDGVKRAIDEG 69 (322)
T ss_dssp -CCCEEECT-T-S-CEEESBCEECTTC----------CHHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHHHHTT
T ss_pred CCCceEECC-C-C-CEECCeeeeCCcC----------CHHHHHHHHHHHHHcCCCEEEccccccCHHHHHHHHHHHhhcC
Confidence 458999995 5 9 9999999999874 5688999999999999999999999999999999999877667
Q ss_pred -CCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCC--CCCCCCCCC-----CCC--CCCCCH
Q 035739 90 -LVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSK--PGELGFPEP-----KED--LLPMDY 159 (335)
Q Consensus 90 -~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~--~~~~~~~~~-----~~~--~~~~~~ 159 (335)
+ +|+++||+||++....+++.+++++++||++||+||||+|+||||+... +++..++.+ ... ......
T Consensus 70 ~~--~R~~~~i~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 147 (322)
T 1mi3_A 70 LV--KREEIFLTSKLWNNYHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPI 147 (322)
T ss_dssp SC--CGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCCTTTCSSCTTCCSSTTCCCBCCCCH
T ss_pred CC--ChhhEEEEEeeCCCCCCHHHHHHHHHHHHHHhCCCCeeeEEEecCcccccCcccccccccccccccccccccCCCH
Confidence 5 8999999999988778899999999999999999999999999996432 111111100 000 002357
Q ss_pred HHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcC
Q 035739 160 RGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIY 239 (335)
Q Consensus 160 ~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~ 239 (335)
.++|++|++|+++||||+||||||+.++++++++.+.++|+++|++||++.++.+++++|+++||++++|+||++ |.+.
T Consensus 148 ~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~~~ 226 (322)
T 1mi3_A 148 LETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQPKLIEFAQKAGVTITAYSSFGP-QSFV 226 (322)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEECTTTT-HHHH
T ss_pred HHHHHHHHHHHHcCCcCEEEEcCCCHHHHHHHHHhCCCCceEeecccCcCcCcHHHHHHHHHcCCEEEEECCCCC-CCcc
Confidence 899999999999999999999999999999999999889999999999999999999999999999999999998 7321
Q ss_pred --------CCCccCChHHHHHHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCC
Q 035739 240 --------GSNQVLENEALKEIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQH 311 (335)
Q Consensus 240 --------~~~~~~~~~~l~~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~ 311 (335)
+.......+.++++|+++|+|++|+||+|++++|++||+|+++++|+++|+++++++|+++|++.|+++..+
T Consensus 227 ~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~~vI~g~~~~~~l~en~~~~~~~L~~e~~~~l~~~~~~ 306 (322)
T 1mi3_A 227 EMNQGRALNTPTLFAHDTIKAIAAKYNKTPAEVLLRWAAQRGIAVIPKSNLPERLVQNRSFNTFDLTKEDFEEIAKLDIG 306 (322)
T ss_dssp TTTCHHHHTSCCTTSCHHHHHHHHHHTCCHHHHHHHHHHTTTCEECCCCCSHHHHHHTTSCCSSCCCHHHHHHHHTTCCC
T ss_pred cccccccccCcccccCHHHHHHHHHcCCCHHHHHHHHHHhCCCEEEcCCCCHHHHHHHHhhcCCCcCHHHHHHHHhhccc
Confidence 112344568999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CccCC
Q 035739 312 RLIPS 316 (335)
Q Consensus 312 ~~~~~ 316 (335)
.+..+
T Consensus 307 ~~~~~ 311 (322)
T 1mi3_A 307 LRFND 311 (322)
T ss_dssp CCSSC
T ss_pred CccCC
Confidence 65443
No 20
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.2e-63 Score=454.07 Aligned_cols=264 Identities=33% Similarity=0.588 Sum_probs=244.6
Q ss_pred cccccceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHH
Q 035739 8 TVFNIPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALR 87 (335)
Q Consensus 8 ~~~~m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~ 87 (335)
..+.|+|++|| | ++||+||||||+++ .+++.++|+.|++.|||+||||+.||+|+.||++|++.
T Consensus 20 ~~~~m~~~~l~---g-~~v~~lglGt~~~~----------~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~-- 83 (298)
T 3up8_A 20 FQSMMHAVSSN---G-ANIPALGFGTFRMS----------GAEVLRILPQALKLGFRHVDTAQIYGNEAEVGEAIQKS-- 83 (298)
T ss_dssp GGGSCCEECCT---T-CCEESEEEECTTCC----------HHHHHHHHHHHHHHTCCEEECCTTTTCHHHHHHHHHHH--
T ss_pred hhccCceEEeC---C-eecCCeeEECCcCC----------HHHHHHHHHHHHHcCCCEEECCCcccCHHHHHHHHHHc--
Confidence 35569999998 4 99999999999874 47889999999999999999999999999999999986
Q ss_pred cCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 035739 88 LGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAME 167 (335)
Q Consensus 88 ~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 167 (335)
++ +|+++||+||++..+.+++.+++++++||++||+||||+|+||||+... ...++|++|+
T Consensus 84 -~~--~R~~v~I~TK~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~----------------~~~e~~~al~ 144 (298)
T 3up8_A 84 -GI--PRADVFLTTKVWVDNYRHDAFIASVDESLRKLRTDHVDLLLLHWPGSDV----------------PMAERIGALN 144 (298)
T ss_dssp -TC--CGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTSSCEEEEEESCSCCSS----------------CHHHHHHHHH
T ss_pred -CC--ChHHEEEEeccCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCCCCC----------------CHHHHHHHHH
Confidence 76 8999999999998888999999999999999999999999999997643 3889999999
Q ss_pred HHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCCCCccCCh
Q 035739 168 ESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLEN 247 (335)
Q Consensus 168 ~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~ 247 (335)
+|+++||||+||||||+.++++++++..+++|+++|++||++.++.+++++|+++||++++|+||++ |.+. ..
T Consensus 145 ~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~l~------~~ 217 (298)
T 3up8_A 145 EVRNAGKVRHIGISNFNTTQMEEAARLSDAPIATNQVEYHPYLDQTKVLQTARRLGMSLTSYYAMAN-GKVP------AD 217 (298)
T ss_dssp HHHHTTSEEEEEEESCCHHHHHHHHHHCSSCEEEEEEECBTTBCCHHHHHHHHHHTCEEEEECTTGG-GHHH------HC
T ss_pred HHHHcCCccEEEEcCCCHHHHHHHHHhCCCCceEEEEecccccccHHHHHHHHHCCCEEEEECCCcC-Cccc------cc
Confidence 9999999999999999999999999998889999999999999999999999999999999999998 7643 34
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhhcC-CEEEeCCCCHHHHHHhhccccccCCHHHHHHHhcc-CCCCc
Q 035739 248 EALKEIAKARGKTVAQVSLRWIVEQG-ATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQI-PQHRL 313 (335)
Q Consensus 248 ~~l~~la~~~g~s~~q~al~~~l~~~-~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~-~~~~~ 313 (335)
+.++++|+++|+|++|+||+|++++| +++|+|+++++|+++|+++++++|+++|++.|+++ ..+.+
T Consensus 218 ~~l~~ia~~~g~s~aqvaL~w~l~~p~v~~I~g~~~~~~l~en~~a~~~~L~~ee~~~l~~l~~~~~r 285 (298)
T 3up8_A 218 PLLTEIGGRHGKTAAQVALRWLVQQQDVIVLSKTATEARLKENFAIFDFALTREEMAAVRELARPNGR 285 (298)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHTSTTEEEEECCCSHHHHHHHHCCSSCCCCHHHHHHHHTTCCTTCC
T ss_pred chHHHHHHHcCCCHHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHhCCCCCCHHHHHHHHHHhccCCc
Confidence 78999999999999999999999995 78999999999999999999999999999999999 54443
No 21
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=100.00 E-value=5e-63 Score=452.65 Aligned_cols=270 Identities=36% Similarity=0.617 Sum_probs=244.2
Q ss_pred cceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcCCC
Q 035739 12 IPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLV 91 (335)
Q Consensus 12 m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g~~ 91 (335)
.++.+|.+ | ++||+||||||+++. .+++.++|+.|++.||||||||+.||+|+.+|++|++. ++
T Consensus 10 ~~~~~l~~--g-~~v~~lglGt~~~~~---------~~~~~~~v~~Al~~G~~~~DTA~~Yg~E~~vG~al~~~---~~- 73 (288)
T 4f40_A 10 KAMVTLSN--G-VKMPQFGLGVWQSPA---------GEVTENAVKWALCAGYRHIDTAAIYKNEESVGAGLRAS---GV- 73 (288)
T ss_dssp TCEEECTT--S-CEEESBCEECTTCCT---------THHHHHHHHHHHHTTCCEEECCGGGTCHHHHHHHHHHH---TC-
T ss_pred CCeEECCC--C-CeecceeEECCcCCC---------cHHHHHHHHHHHHcCCCeEECcccccCHHHHHHHHHhc---CC-
Confidence 67889977 9 999999999999862 37889999999999999999999999999999999986 76
Q ss_pred CCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 035739 92 SSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQM 171 (335)
Q Consensus 92 ~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~ 171 (335)
+|+++||+||++..+.+++.+++++++||++||+||||+|++|||+...+. ........++|++|++|++
T Consensus 74 -~R~~~~I~TK~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~llH~p~~~~~~---------~~~~~~~~e~~~al~~l~~ 143 (288)
T 4f40_A 74 -PREDVFITTKLWNTEQGYESTLAAFEESRQKLGVDYIDLYLIHWPRGKDIL---------SKEGKKYLDSWRAFEQLYK 143 (288)
T ss_dssp -CGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCCHHHH---------HHHCCHHHHHHHHHHHHHH
T ss_pred -ChhhEEEEEecCCCcCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCCCccc---------ccccccHHHHHHHHHHHHH
Confidence 899999999999888889999999999999999999999999999642100 0001237899999999999
Q ss_pred cCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCCCCccCChHHHH
Q 035739 172 LGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALK 251 (335)
Q Consensus 172 ~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~ 251 (335)
+||||+||||||+.++++++++.+.++|+++|++||+++++.+++++|+++||++++|+||++ |.+. ..+.++
T Consensus 144 ~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~l~------~~~~l~ 216 (288)
T 4f40_A 144 EKKVRAIGVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQADLRAFCDAKQIKVEAWSPLGQ-GKLL------SNPILS 216 (288)
T ss_dssp TTSEEEEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTC---CGG------GCHHHH
T ss_pred cCCccEEEeccCCHHHHHHHHHhCCCCCeEEeccCccccCCHHHHHHHHHCCCEEEEecCCCC-Cccc------ccHHHH
Confidence 999999999999999999999988889999999999999999999999999999999999998 7664 357899
Q ss_pred HHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCCCcc
Q 035739 252 EIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLI 314 (335)
Q Consensus 252 ~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~ 314 (335)
++|+++|+|++|+||+|++++|+++|+|+++++|+++|+++++++|+++|++.|+++..+.+.
T Consensus 217 ~ia~~~g~t~aqvaL~w~l~~~~~~i~g~~~~~~l~en~~~~~~~L~~ee~~~i~~l~~~~r~ 279 (288)
T 4f40_A 217 AIGAKYNKTAAQVILRWNIQKNLITIPKSVHRERIEENADIFDFELGAEDVMSIDALNTNSRY 279 (288)
T ss_dssp HHHHHHTCCHHHHHHHHHHHTTCEECCBCSSHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCS
T ss_pred HHHHHhCCCHHHHHHHHHHhCCCeEeeCCCCHHHHHHHhhhcCCCCCHHHHHHHHhhccCCcc
Confidence 999999999999999999999999999999999999999999999999999999999887664
No 22
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=4.4e-62 Score=446.90 Aligned_cols=266 Identities=35% Similarity=0.657 Sum_probs=242.2
Q ss_pred cccccceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHH
Q 035739 8 TVFNIPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALR 87 (335)
Q Consensus 8 ~~~~m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~ 87 (335)
....|++++|+ | | ++||+||||||+++ .+++.++|+.|++.|||+||||+.||+|+.||++|++.
T Consensus 21 ~~~~~~~~~L~-t-g-~~vs~lglGt~~~~----------~~~~~~~l~~Al~~Gi~~~DTA~~Yg~E~~vG~al~~~-- 85 (296)
T 1mzr_A 21 GLANPTVIKLQ-D-G-NVMPQLGLGVWQAS----------NEEVITAIQKALEVGYRSIDTAAAYKNEEGVGKALKNA-- 85 (296)
T ss_dssp --CCCCEEECT-T-S-CEEESBCEECCSCC----------HHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHS--
T ss_pred cCCCCceEECC-C-C-CeeCCEeEECCCCC----------HHHHHHHHHHHHHcCCCEEECCccccCHHHHHHHHHhc--
Confidence 45579999995 4 9 99999999999873 47889999999999999999999999999999999974
Q ss_pred cCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 035739 88 LGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAME 167 (335)
Q Consensus 88 ~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 167 (335)
++ +|+++||+||++..+. +.+++++++||++||+||||+|++|||+.. .....++|++|+
T Consensus 86 -~~--~R~~v~I~TK~~~~~~--~~v~~~~e~SL~rLg~dyiDl~llH~p~~~---------------~~~~~e~~~al~ 145 (296)
T 1mzr_A 86 -SV--NREELFITTKLWNDDH--KRPREALLDSLKKLQLDYIDLYLMHWPVPA---------------IDHYVEAWKGMI 145 (296)
T ss_dssp -CS--CGGGCEEEEEECGGGT--TCHHHHHHHHHHHHTCSCEEEEEESCCCTT---------------TCCHHHHHHHHH
T ss_pred -CC--CcccEEEEeccCCCcH--HHHHHHHHHHHHHhCCCcEEEEEEccCCCC---------------cCCHHHHHHHHH
Confidence 65 8999999999986554 899999999999999999999999999652 123789999999
Q ss_pred HHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCCCCccCCh
Q 035739 168 ESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLEN 247 (335)
Q Consensus 168 ~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~ 247 (335)
+|+++||||+||||||++++++++++.++++|.++|++||++.++.+++++|+++||++++|+||++ |.+ ..+..
T Consensus 146 ~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~~----~~l~~ 220 (296)
T 1mzr_A 146 ELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQ-GGK----GVFDQ 220 (296)
T ss_dssp HHHHTTSEEEEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTTT-TCT----TTTTS
T ss_pred HHHHCCCcCEEEEeCCCHHHHHHHHHhcCCCceEEeeecccccCCHHHHHHHHHCCCeEEEeccccC-Ccc----hhcCh
Confidence 9999999999999999999999999988888999999999999999999999999999999999998 743 23446
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCCCc
Q 035739 248 EALKEIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRL 313 (335)
Q Consensus 248 ~~l~~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~ 313 (335)
+.++++|+++|+|++|+||+|+++++++||+|+++++|+++|+++++++|+++|++.|+++..+.+
T Consensus 221 ~~l~~ia~~~g~s~aqvaL~w~l~~~v~vI~g~~~~~~l~enl~a~~~~Ls~e~~~~l~~~~~~~~ 286 (296)
T 1mzr_A 221 KVIRDLADKYGKTPAQIVIRWHLDSGLVVIPKSVTPSRIAENFDVWDFRLDKDELGEIAKLDQGKR 286 (296)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHTTCEECCBCCCHHHHHHTTCCSSCCCCHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHhCCCEEEeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhhhcCC
Confidence 789999999999999999999999999999999999999999999999999999999999987654
No 23
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=100.00 E-value=7.2e-63 Score=463.12 Aligned_cols=283 Identities=21% Similarity=0.393 Sum_probs=250.1
Q ss_pred cccceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcC---CHHHHHHHHHHHH
Q 035739 10 FNIPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEAL 86 (335)
Q Consensus 10 ~~m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg---se~~lG~~l~~~~ 86 (335)
|.|+|++||+| | ++||+||||||++++. .++..+.+++.++|+.|++.|||+||||+.|| +|+.||++|+.
T Consensus 17 m~M~~~~lg~t-g-~~vs~lglGt~~~g~~--~~g~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~-- 90 (348)
T 3n2t_A 17 MASDTIRIPGI-D-TPLSRVALGTWAIGGW--MWGGPDDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALAE-- 90 (348)
T ss_dssp CTTSEECCTTC-S-SCEESEEEECTTSSCS--SSCSTTHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHH--
T ss_pred CCceeeecCCC-C-CccCCEeEeCccccCC--CCCCCCHHHHHHHHHHHHHcCCCEEEChhhcCCChHHHHHHHHHhh--
Confidence 45999999999 9 9999999999999752 23456788999999999999999999999999 99999999995
Q ss_pred HcCCCCCCCceEEeeccCC-----C--------CCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCC
Q 035739 87 RLGLVSSREQLFITSKLWC-----Q--------NAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKED 153 (335)
Q Consensus 87 ~~g~~~~R~~~~i~tK~~~-----~--------~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~ 153 (335)
.|+++||+||++. . +.+++.+++++++||++||+||||+|++|||+...+
T Consensus 91 ------~R~~v~I~TK~g~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~----------- 153 (348)
T 3n2t_A 91 ------KPNKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIHWPDDKTP----------- 153 (348)
T ss_dssp ------SCCCCEEEEEECEEEESSSTTTCEEEECCCHHHHHHHHHHHHHHHTCSSEEEEEESSCCTTSC-----------
T ss_pred ------CCCeEEEEEeecCCCcCCCcccccccCCCCHHHHHHHHHHHHHHhCCCcEEEEEecCCCCCCC-----------
Confidence 7999999999942 1 257899999999999999999999999999976433
Q ss_pred CCCCCHHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCccccc--HHHHHHHHHcCCeEEEecc
Q 035739 154 LLPMDYRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQ--RKLIEFCKAKGIIVTAYSP 231 (335)
Q Consensus 154 ~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~--~~~l~~~~~~gi~v~a~~p 231 (335)
.+++|++|++|+++||||+||||||++++++++++.. +|+++|++||+++++ .+++++|+++||++++|+|
T Consensus 154 -----~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~--~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~sp 226 (348)
T 3n2t_A 154 -----IDESARELQKLHQDGKIRALGVSNFSPEQMDIFREVA--PLATIQPPLNLFERTIEKDILPYAEKHNAVVLAYGA 226 (348)
T ss_dssp -----HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHS--CCCEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBCT
T ss_pred -----HHHHHHHHHHHHHhCcceEEecCCCCHHHHHHHHHhC--CccEEEeeecCccCchHHHHHHHHHHcCCeEEEeec
Confidence 8999999999999999999999999999999999987 578999999999986 6899999999999999999
Q ss_pred CCCCCCcCCCCcc---------------CC----------hHHHHHHHHHhCCCHHHHHHHHHhhcC-CEEEeCCCCHHH
Q 035739 232 LGAVGKIYGSNQV---------------LE----------NEALKEIAKARGKTVAQVSLRWIVEQG-ATVVIKSLNLER 285 (335)
Q Consensus 232 l~~~G~l~~~~~~---------------~~----------~~~l~~la~~~g~s~~q~al~~~l~~~-~~vi~g~~~~~~ 285 (335)
|++ |.|+++... .. .+.++++|+++|+|++|+||+|+++++ ++||+|+++++|
T Consensus 227 L~~-G~Ltg~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~v~~~I~g~~~~~~ 305 (348)
T 3n2t_A 227 LCR-GLLTGKMNRDTTFPKDDLRSNDPKFQKPNFEKYLAAMDEFEKLAEKRGKSVMAFAVRWVLDQGPVIALWGARKPGQ 305 (348)
T ss_dssp TGG-GGGGTCCCTTCCCCTTSGGGGCGGGSTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTTTTEEEEEECSSGGG
T ss_pred ccC-ccccCCccCCCCCCCcchhhcccccchhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHCCCcEEEeCCCCHHH
Confidence 998 988754110 00 157899999999999999999999998 599999999999
Q ss_pred HHHhhccccccCCHHHHHHHhccCCCC--ccCCccccCCC
Q 035739 286 MKQNLGIFDWKLTDDDYDKINQIPQHR--LIPSDFWVSPQ 323 (335)
Q Consensus 286 l~enl~a~~~~L~~~~~~~l~~~~~~~--~~~~~~~~~~~ 323 (335)
+++|+++++++|++++++.|+++.... ...|.+|..|+
T Consensus 306 l~enl~a~~~~L~~e~~~~l~~~~~~~~~~~~g~~~~~~~ 345 (348)
T 3n2t_A 306 VSGVKDVFGWSLTDEEKKAVDDILARHVPNPIDPTFMAPP 345 (348)
T ss_dssp GTTHHHHSSCCCCHHHHHHHHHHHHHHSCCCCCSSCCC--
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHHhccCCCCccccCCc
Confidence 999999999999999999999987764 55566666653
No 24
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=100.00 E-value=8.6e-62 Score=452.13 Aligned_cols=290 Identities=37% Similarity=0.696 Sum_probs=255.3
Q ss_pred cceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcCCC
Q 035739 12 IPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLV 91 (335)
Q Consensus 12 m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g~~ 91 (335)
.+++.|++ | ++||.||||||+. +.+++.++|+.|+++||||||||+.||+|+.||++|++....+..
T Consensus 2 ~~~v~Lnt--G-~~vp~iGlGtw~~----------~~~~a~~~i~~Al~~Gin~~DTA~~YgsE~~vG~al~~~~~~~~~ 68 (324)
T 4gac_A 2 ASSVLLHT--G-QKMPLIGLGTWKS----------EPGQVKAAIKHALSAGYRHIDCASVYGNETEIGEALKESVGSGKA 68 (324)
T ss_dssp CCEEECTT--S-CEEESBCEECTTC----------CHHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHHBSTTSS
T ss_pred CCeEECCC--C-CEeccceeECCCC----------CHHHHHHHHHHHHHcCCCEEECCcccCCHHHHHHHHHhhhcccce
Confidence 35677755 9 9999999999875 568899999999999999999999999999999999987554432
Q ss_pred CCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCC---CCCCCCHHHHHHHHHH
Q 035739 92 SSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKE---DLLPMDYRGVWEAMEE 168 (335)
Q Consensus 92 ~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~L~~ 168 (335)
..|+++++++|.+..+.+++.+++++++||+|||+||||+|++|||+.....+...+.... .......+++|++|++
T Consensus 69 ~~r~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~ 148 (324)
T 4gac_A 69 VPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVRYDSTHYKETWKALEV 148 (324)
T ss_dssp BCGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCBSEEEESCSSEECSSSCSSCBCTTSCBCEECCCHHHHHHHHHH
T ss_pred ecccccccccccCCCCCCHHHHHHHHHHHHHHhCCCccceeeeccCcccccccccccccccCccccCCCCHHHHHHHHHH
Confidence 2899999999999888899999999999999999999999999999765433222221111 1224568999999999
Q ss_pred HHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCCCC----cc
Q 035739 169 SQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSN----QV 244 (335)
Q Consensus 169 l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~----~~ 244 (335)
|+++||||+||+|||++++++++...+.+.+.++|+++++..++.+++++|+++||++++|+||++ |.+.+.. ..
T Consensus 149 l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~l~~~~~~~gi~~~a~spL~~-g~~~~~~~~~~~~ 227 (324)
T 4gac_A 149 LVAKGLVKALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCHARGLEVTAYSPLGS-SDRAWRHPDEPVL 227 (324)
T ss_dssp HHHTTSBSCEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTCC-GGGGGGSTTSCCG
T ss_pred HHHCCCeeEecCCCCCHHHHHHHHHhCCCCcceeeeccCchhhHHHHHHHHHHhceeeeecCCccc-CccccCCCCCcch
Confidence 999999999999999999999999999999999999999999999999999999999999999998 8775432 34
Q ss_pred CChHHHHHHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCCCccC
Q 035739 245 LENEALKEIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIP 315 (335)
Q Consensus 245 ~~~~~l~~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~ 315 (335)
...+.++++|+++|+|++|+||+|++++|.+||+|+++++|+++|++++++.||++|+++|+++..+.|..
T Consensus 228 ~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~I~G~~~~~~l~eN~~a~~~~Ls~ee~~~id~l~~~~R~~ 298 (324)
T 4gac_A 228 LEEPVVLALAEKHGRSPAQILLRWQVQRKVICIPKSINPSRILQNIQVFDFTFSPEEMKQLDALNKNWRYI 298 (324)
T ss_dssp GGCHHHHHHHHHHTCCHHHHHHHHHHHTTCEECCBCCCHHHHHHHTCCSSCCCCHHHHHHHHTTCCCCCCC
T ss_pred hhHHHHHHHHHHhCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHhhCCCCCCHHHHHHHhccCcCCCcc
Confidence 45688999999999999999999999999999999999999999999999999999999999999887755
No 25
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=100.00 E-value=4.6e-62 Score=454.44 Aligned_cols=274 Identities=28% Similarity=0.414 Sum_probs=242.6
Q ss_pred cccceEEcCCCCCCccCCcceeeCc-ccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcC---CHHHHHHHHHHH
Q 035739 10 FNIPKLKLSSSSGHLNMPVIGLGCA-VDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEA 85 (335)
Q Consensus 10 ~~m~~~~lg~t~g~~~vs~lg~G~~-~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg---se~~lG~~l~~~ 85 (335)
|.|+||+||+| | ++||+|||||| .+|+ ..+.+++.++|+.|+++|||+||||+.|| +|+.||++|++.
T Consensus 1 ~~m~yr~lG~t-g-~~vs~iglGt~~~~g~------~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~ 72 (327)
T 3eau_A 1 MLQFYRNLGKS-G-LRVSCLGLGTWVTFGG------QITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKK 72 (327)
T ss_dssp CCCSEEESTTS-S-CEEESEEEECTTCCCC------CSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHH
T ss_pred CcchhcccCCC-C-CcccceeecCccccCC------CCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHHhc
Confidence 57999999999 9 99999999997 4432 45778999999999999999999999997 599999999986
Q ss_pred HHcCCCCCCCceEEeeccCCC-------CCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCC
Q 035739 86 LRLGLVSSREQLFITSKLWCQ-------NAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMD 158 (335)
Q Consensus 86 ~~~g~~~~R~~~~i~tK~~~~-------~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~ 158 (335)
++ +|+++||+||++.. +.+++.+++++++||++||+||||+|++|||+...+
T Consensus 73 ---~~--~R~~v~I~TK~~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~---------------- 131 (327)
T 3eau_A 73 ---GW--RRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTP---------------- 131 (327)
T ss_dssp ---TC--CGGGCEEEEEESBCCSSGGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSC----------------
T ss_pred ---CC--ccCeEEEEEeecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEEeCCCCCCC----------------
Confidence 66 79999999998532 347899999999999999999999999999976433
Q ss_pred HHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhc----CCCCccccCCCCccccc---HHHHHHHHHcCCeEEEecc
Q 035739 159 YRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFA----TIPPSINQVEMHPVWQQ---RKLIEFCKAKGIIVTAYSP 231 (335)
Q Consensus 159 ~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~----~~~~~~~q~~~~~~~~~---~~~l~~~~~~gi~v~a~~p 231 (335)
.+++|++|++|+++||||+||||||+++++.++++.+ .++|+++|++||++.++ .+++++|+++||++++|+|
T Consensus 132 ~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~l~~~~~~~gi~v~a~sp 211 (327)
T 3eau_A 132 MEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSP 211 (327)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHTTCCCCCEEEEECBTTBCHHHHHHHHHHHHHHCCEEEEECT
T ss_pred HHHHHHHHHHHHHcCCeeEEeecCCCHHHHHHHHHHHHHcCCCCceeecccccccccchhHhhHHHHHHHcCCeEEEecc
Confidence 8899999999999999999999999999999987754 26889999999999886 3689999999999999999
Q ss_pred CCCCCCcCCCCcc-----------------------------CChHHHHHHHHHhCCCHHHHHHHHHhhcC--CEEEeCC
Q 035739 232 LGAVGKIYGSNQV-----------------------------LENEALKEIAKARGKTVAQVSLRWIVEQG--ATVVIKS 280 (335)
Q Consensus 232 l~~~G~l~~~~~~-----------------------------~~~~~l~~la~~~g~s~~q~al~~~l~~~--~~vi~g~ 280 (335)
|++ |.|+++... ...+.++++|+++|+|++|+||+|+++++ ++||+|+
T Consensus 212 L~~-G~Ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~vI~g~ 290 (327)
T 3eau_A 212 LAC-GIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGA 290 (327)
T ss_dssp TGG-GGGGTTTTTSCCTTSGGGSTTCHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHSSTTCCEEEECC
T ss_pred ccC-ceecCcccCCCCCCcccccccccccccccccchhHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHhCCCCceEEeCC
Confidence 998 998764210 01267899999999999999999999996 5899999
Q ss_pred CCHHHHHHhhccccc--cCCHHHHHHHhccCCCCc
Q 035739 281 LNLERMKQNLGIFDW--KLTDDDYDKINQIPQHRL 313 (335)
Q Consensus 281 ~~~~~l~enl~a~~~--~L~~~~~~~l~~~~~~~~ 313 (335)
++++|+++|++++++ +|++++++.|+++..+.+
T Consensus 291 ~~~~~l~en~~a~~~~~~L~~e~~~~i~~~~~~~p 325 (327)
T 3eau_A 291 SNAEQLMENIGAIQVLPKLSSSIVHEIDSILGNKP 325 (327)
T ss_dssp SSHHHHHHHHGGGGGGGGCCHHHHHHHHHHHCCCC
T ss_pred CCHHHHHHHHHHhccCCCCCHHHHHHHHHHhhccC
Confidence 999999999999998 999999999999987654
No 26
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=6.7e-62 Score=450.09 Aligned_cols=266 Identities=41% Similarity=0.721 Sum_probs=247.4
Q ss_pred cceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHc-CC
Q 035739 12 IPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRL-GL 90 (335)
Q Consensus 12 m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~-g~ 90 (335)
-.+++|++ | ++||.||||||+++ +.+++.++|+.|+++||||||||+.||+|+.+|+++++.+.+ ++
T Consensus 40 ~~~~TLn~--G-~~ip~lGlGt~~~~---------d~~e~~~~v~~Al~~Gi~~~DTA~~YgnE~~vG~~l~~~~~~~~i 107 (314)
T 3b3d_A 40 QAKATLHN--G-VEMPWFGLGVFQVE---------EGSELVNAVKTAIVHGYRSIDTAAIYGNEAGVGEGIREGIEEAGI 107 (314)
T ss_dssp TCEEECTT--S-CEEESBCEECCSCC---------CSHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHHHTC
T ss_pred CCcEECCC--c-CcccceeEECCCCC---------CHHHHHHHHHHHHHcCCCEEECccccCChHHHHHHHHHHHHHhCC
Confidence 35789987 9 99999999999985 557889999999999999999999999999999999887655 55
Q ss_pred CCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 035739 91 VSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQ 170 (335)
Q Consensus 91 ~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~ 170 (335)
.|+++++++|++..+.+++.+++++++||+|||+||||+|++|||+.. ...++|++|++|+
T Consensus 108 --~r~~~~i~~k~~~~~~~~~~~~~~~e~SL~rL~~dyiDL~~~H~~~~~-----------------~~~e~~~al~~l~ 168 (314)
T 3b3d_A 108 --SREDLFITSKVWNADLGYEETLAAFETSLSKLGLDYLDLYLIHWPVEG-----------------KYKEAWRALETLY 168 (314)
T ss_dssp --CGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTT-----------------THHHHHHHHHHHH
T ss_pred --CcccccccccCcCCCCCHHHHHHHHHHHHHHhCCCccccccccccccc-----------------chhHHHHHHHHHH
Confidence 899999999999989999999999999999999999999999999642 3789999999999
Q ss_pred HcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCCCCccCChHHH
Q 035739 171 MLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEAL 250 (335)
Q Consensus 171 ~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l 250 (335)
++||||+||||||+.+++.++++.+.++|+++|+++++...+.+++++|+++||++++|+||++ |.|++ ...+
T Consensus 169 ~~Gkir~iGvSn~~~~~l~~~~~~~~i~~~~nq~~~~~~~~~~~ll~~c~~~gI~v~a~sPL~~-G~L~~------~~~~ 241 (314)
T 3b3d_A 169 KEGRIKAIGVSNFQIHHLEDLMTAAEIKPMINQVEFHPRLTQKELIRYCQNQGIQMEAWSPLMQ-GQLLD------HPVL 241 (314)
T ss_dssp HTTSEEEEEEESCCHHHHHHHTTTCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGG-GTTTT------CHHH
T ss_pred HCCCEeEEEecCCchHHHHHHHHhcCCCeEEEEeccccccchHHHHHHHHHcCCEEEEeccccC-CcccC------chhh
Confidence 9999999999999999999999999999999999999988889999999999999999999998 87754 4678
Q ss_pred HHHHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCCCccC
Q 035739 251 KEIAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHRLIP 315 (335)
Q Consensus 251 ~~la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~~~~ 315 (335)
.++|+++|+|++|+||+|++++|.+||+|+++++|+++|++++++.||++|+++|+++.++.|..
T Consensus 242 ~~ia~~~g~t~aqvaL~w~l~~~~v~I~G~~~~~~l~eNl~a~~~~Ls~ee~~~ld~l~~~~r~~ 306 (314)
T 3b3d_A 242 ADIAQTYNKSVAQIILRWDLQHGIITIPKSTKEHRIKENASVFDFELTQDDMNRIDALNENLRVG 306 (314)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHTTCEECCBCCCHHHHHHHHCCSSCCCCHHHHHHHHTTCCCCCCS
T ss_pred HHHHHHcCCCHHHHHHHHHHhCCCEEEECCCCHHHHHHHHHhcCCCCCHHHHHHHhccCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999887754
No 27
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=100.00 E-value=2.4e-62 Score=454.07 Aligned_cols=277 Identities=24% Similarity=0.309 Sum_probs=245.7
Q ss_pred ccccceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcC---CHHHHHHHHHHH
Q 035739 9 VFNIPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEA 85 (335)
Q Consensus 9 ~~~m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg---se~~lG~~l~~~ 85 (335)
...|+|++||+| | ++||+||||||++|. + ..+.+++.++|+.|++.|||+||||+.|| +|+.||++|++.
T Consensus 20 ~~~M~~~~Lg~~-~-~~vs~lglGt~~~g~----~-~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~ 92 (319)
T 1ur3_M 20 AGLVQRITIAPQ-G-PEFSRFVMGYWRLMD----W-NMSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLA 92 (319)
T ss_dssp --CCCEEECSTT-C-CEEESSEEECTTTTT----T-TCCHHHHHHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHC
T ss_pred hhhCceEECCCC-C-cccccccEeccccCC----C-CCCHHHHHHHHHHHHHcCCCeEEcccccCCCcHHHHHHHHHHhC
Confidence 334899999998 8 999999999999974 1 34778899999999999999999999999 999999999973
Q ss_pred HHcCCCCCCCceEEeeccCCC------------CCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCC
Q 035739 86 LRLGLVSSREQLFITSKLWCQ------------NAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKED 153 (335)
Q Consensus 86 ~~~g~~~~R~~~~i~tK~~~~------------~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~ 153 (335)
+. +|+++||+||++.. +.+++.+++++++||++||+||||+|++|||+...
T Consensus 93 ---~~--~R~~v~I~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~------------ 155 (319)
T 1ur3_M 93 ---PH--LRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLM------------ 155 (319)
T ss_dssp ---GG--GTTTCEEEEEECEECTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSEEEECSCCTTC------------
T ss_pred ---CC--CCCeEEEEEeeccCCCCCcccccccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCC------------
Confidence 33 69999999999741 46789999999999999999999999999997643
Q ss_pred CCCCCHHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccH---HHHHHHHHcCCeEEEec
Q 035739 154 LLPMDYRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQR---KLIEFCKAKGIIVTAYS 230 (335)
Q Consensus 154 ~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~---~~l~~~~~~gi~v~a~~ 230 (335)
...++|++|++|+++||||+||||||+.++++++++..+.+|+++|++||+++++. +++++|+++||++++|+
T Consensus 156 ----~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~ll~~~~~~gi~v~a~s 231 (319)
T 1ur3_M 156 ----DADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWS 231 (319)
T ss_dssp ----CHHHHHHHHHHHHHTTSBCCEEEESCCHHHHHHHHTTCSSCCCCEEEECBTTBCGGGTSSHHHHHHHHTCCCEEEC
T ss_pred ----CHHHHHHHHHHHHHCCCccEEEecCCCHHHHHHHHHhcCCCcEEEEccCchhhCchhhHHHHHHHHHcCCeEEEec
Confidence 37899999999999999999999999999999999888788999999999999873 49999999999999999
Q ss_pred cCCCCCCcCCCCc-cCChHHHHHHHHHhCCCH-HHHHHHHHhhcC--CEEEeCCCCHHHHHHhhccccccCCHHHHHHHh
Q 035739 231 PLGAVGKIYGSNQ-VLENEALKEIAKARGKTV-AQVSLRWIVEQG--ATVVIKSLNLERMKQNLGIFDWKLTDDDYDKIN 306 (335)
Q Consensus 231 pl~~~G~l~~~~~-~~~~~~l~~la~~~g~s~-~q~al~~~l~~~--~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~ 306 (335)
||++ |.|+.... ....+.++++|+++|+|+ +|+||+|++++| ++||+|+++++|+++|+++++++|+++|+++|+
T Consensus 232 pL~~-G~L~~~~~~~~~~~~l~~ia~~~g~t~~aqvaL~w~l~~~~~~~~I~G~~~~~~l~en~~a~~~~Ls~ee~~~l~ 310 (319)
T 1ur3_M 232 CLGG-GRLFNDDYFQPLRDELAVVAEELNAGSIEQVVNAWVLRLPSQPLPIIGSGKIERVRAAVEAETLKMTRQQWFRIR 310 (319)
T ss_dssp CCTT-TCSSSCGGGHHHHHHHHHHHHHTTCSCHHHHHHHHHHTSTTCCEEEECCSCHHHHHHHHGGGGCCCCHHHHHHHH
T ss_pred cccC-ccccCCchhHHHHHHHHHHHHHcCCChHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhccCCCCHHHHHHHH
Confidence 9998 88754211 112378999999999999 999999999997 799999999999999999999999999999999
Q ss_pred ccCCCCcc
Q 035739 307 QIPQHRLI 314 (335)
Q Consensus 307 ~~~~~~~~ 314 (335)
++..+.++
T Consensus 311 ~~~~~~~~ 318 (319)
T 1ur3_M 311 KAALGYDV 318 (319)
T ss_dssp HHHHSSCC
T ss_pred HHhcCCCC
Confidence 98766543
No 28
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=100.00 E-value=8.7e-63 Score=460.79 Aligned_cols=280 Identities=24% Similarity=0.405 Sum_probs=239.0
Q ss_pred cceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcC----CHHHHHHHHHHHHH
Q 035739 12 IPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYG----TEKALGEAIAEALR 87 (335)
Q Consensus 12 m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg----se~~lG~~l~~~~~ 87 (335)
|+|++||+| | ++||+||||||+++..++ ...+.+++.++|+.|++.||||||||+.|| +|+.||++|++.
T Consensus 1 M~~~~lg~t-g-~~vs~lglGt~~~g~~~~--~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~G~sE~~lG~al~~~-- 74 (337)
T 3v0s_A 1 MPRVKLGTQ-G-LEVSKLGFGCMGLSGDYN--DALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQL-- 74 (337)
T ss_dssp CCEEECSSS-S-CEEESSCEECGGGC---------CHHHHHHHHHHHHHTTCCEEECCTTSSSTTHHHHHHHHHHTTS--
T ss_pred CCeeecCCC-C-ceecCeeecccccCCCCC--CCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCcHHHHHHHHHhhc--
Confidence 899999999 9 999999999999975221 234778899999999999999999999998 899999999852
Q ss_pred cCCCCCCCceEEeeccCCC---------CCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCC
Q 035739 88 LGLVSSREQLFITSKLWCQ---------NAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMD 158 (335)
Q Consensus 88 ~g~~~~R~~~~i~tK~~~~---------~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~ 158 (335)
+|+++||+||++.. +.+++.+++++++||++||+||||+|++|||+...+
T Consensus 75 -----~R~~~~i~TK~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~---------------- 133 (337)
T 3v0s_A 75 -----PREXIQVGTKFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTVP---------------- 133 (337)
T ss_dssp -----CGGGCEEEEEECEEEEETTEEEECCCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSC----------------
T ss_pred -----CCcceEEEeeeccccCCCCcccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCC----------------
Confidence 79999999999754 457899999999999999999999999999976433
Q ss_pred HHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCccccc--HHHHHHHHHcCCeEEEeccCCCCC
Q 035739 159 YRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQ--RKLIEFCKAKGIIVTAYSPLGAVG 236 (335)
Q Consensus 159 ~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~--~~~l~~~~~~gi~v~a~~pl~~~G 236 (335)
.+++|++|++|+++||||+||||||+++++.++++.. +++++|++||++.++ .+++++|+++||++++|+||++ |
T Consensus 134 ~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~--~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G 210 (337)
T 3v0s_A 134 IEITMGELXXLVEEGKIXYVGLSEASPDTIRRAHAVH--PVTALQIEYSLWTRDIEDEIVPLCRQLGIGIVPYSPIGR-G 210 (337)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHS--CCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTHH-H
T ss_pred HHHHHHHHHHHHHCCCeeEEeccCCCHHHHHHHhccC--CceEEEeeccccccchhHHHHHHHHHcCceEEEeccccC-c
Confidence 8899999999999999999999999999999998875 467999999999987 5799999999999999999998 8
Q ss_pred CcCCCC------------------------ccCChHHHHHHHHHhCCCHHHHHHHHHhhcC--CEEEeCCCCHHHHHHhh
Q 035739 237 KIYGSN------------------------QVLENEALKEIAKARGKTVAQVSLRWIVEQG--ATVVIKSLNLERMKQNL 290 (335)
Q Consensus 237 ~l~~~~------------------------~~~~~~~l~~la~~~g~s~~q~al~~~l~~~--~~vi~g~~~~~~l~enl 290 (335)
+|+++. .....+.++++|+++|+|++|+||+|++++| ++||+|+++++|+++|+
T Consensus 211 ~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~t~aqvaL~w~l~~~~v~~~I~g~~~~~~l~en~ 290 (337)
T 3v0s_A 211 LFWGKAIKESLPENSVLTSHPRFVGENLEKNKQIYYRIEALSQKHGCTPVQLALAWVLHQGEDVVPIPGTTKIKNLHNNV 290 (337)
T ss_dssp HHHHHHHHC-------------------------CHHHHHHHHHTTSCHHHHHHHHHHTTCTTBCCCCCCSCHHHHHHHH
T ss_pred ccCCCCCCCCCCCcchhhcccccchhhhhhHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCeEEEcCCCCHHHHHHHH
Confidence 775420 0011268999999999999999999999999 79999999999999999
Q ss_pred ccccccCCHHHHHHHhccCCCCccCCccccC
Q 035739 291 GIFDWKLTDDDYDKINQIPQHRLIPSDFWVS 321 (335)
Q Consensus 291 ~a~~~~L~~~~~~~l~~~~~~~~~~~~~~~~ 321 (335)
++++++|+++|++.|+++....++.|.+|..
T Consensus 291 ~a~~~~L~~e~~~~l~~~~~~~~~~g~~~~~ 321 (337)
T 3v0s_A 291 GALKVXLTKEDLKEISDAVPLDEVAGESIHE 321 (337)
T ss_dssp HGGGCCCCHHHHHHHHHTCC-----------
T ss_pred HHhccCCCHHHHHHHHHhhcccCCCCCCchH
Confidence 9999999999999999999988888888776
No 29
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=100.00 E-value=2.4e-61 Score=442.48 Aligned_cols=264 Identities=39% Similarity=0.700 Sum_probs=241.9
Q ss_pred ceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcCCCC
Q 035739 13 PKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVS 92 (335)
Q Consensus 13 ~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g~~~ 92 (335)
+.+.+|+| | ++||+||||||+++ .+++.++|+.|++.|||+||||+.||+|+.+|++|++.++++-+
T Consensus 15 ~~~~~~~t-g-~~v~~lglGt~~~~----------~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~vG~al~~~~~~~~~- 81 (298)
T 1vp5_A 15 VPKVTLNN-G-VEMPILGYGVFQIP----------PEKTEECVYEAIKVGYRLIDTAASYMNEEGVGRAIKRAIDEGIV- 81 (298)
T ss_dssp CCEEECTT-S-CEEESBCEECTTCC----------HHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSC-
T ss_pred CceEeCCC-C-CCccCeeEeCCcCC----------hHHHHHHHHHHHHcCCCEEECCCcccCHHHHHHHHHHhhhccCC-
Confidence 45667887 9 99999999999874 36789999999999999999999999999999999986544322
Q ss_pred CCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHc
Q 035739 93 SREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQML 172 (335)
Q Consensus 93 ~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~ 172 (335)
+|+++||+||++..+.+++.+++++++||++||+||||+|++|||+. ...++|++|++|+++
T Consensus 82 ~R~~v~I~TK~~~~~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~------------------~~~e~~~al~~l~~~ 143 (298)
T 1vp5_A 82 RREELFVTTKLWVSDVGYESTKKAFEKSLKKLQLEYIDLYLIHQPFG------------------DVHCAWKAMEEMYKD 143 (298)
T ss_dssp CGGGCEEEEEECGGGCSSHHHHHHHHHHHHHHTCSCEEEEEECSSCS------------------CHHHHHHHHHHHHHT
T ss_pred ChhhEEEEeccCCCCCCHHHHHHHHHHHHHHHCCCcEEEEEecCCCC------------------CHHHHHHHHHHHHHc
Confidence 79999999999877788999999999999999999999999999953 278999999999999
Q ss_pred CCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCCCCccCChHHHHH
Q 035739 173 GLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKE 252 (335)
Q Consensus 173 Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~ 252 (335)
||||+||||||++++++++++.++++|+++|++||+++++.+++++|+++||++++|+||++ |. ..++..+.+++
T Consensus 144 Gkir~iGvSn~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~----~~~l~~~~l~~ 218 (298)
T 1vp5_A 144 GLVRAIGVSNFYPDRLMDLMVHHEIVPAVNQIEIHPFYQRQEEIEFMRNYNIQPEAWGPFAE-GR----KNIFQNGVLRS 218 (298)
T ss_dssp TSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTGG-GG----GGGGGCHHHHH
T ss_pred CCccEEEecCCCHHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHCCCEEEEeccccc-CC----ccccCcHHHHH
Confidence 99999999999999999999999899999999999999999999999999999999999997 73 12344578999
Q ss_pred HHHHhCCCHHHHHHHHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhccCCCC
Q 035739 253 IAKARGKTVAQVSLRWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQHR 312 (335)
Q Consensus 253 la~~~g~s~~q~al~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~~~ 312 (335)
+|+++|+|++|+||+|++++|++||+|+++++|+++|+++++++|++++++.|+++....
T Consensus 219 ia~~~g~s~aqvaL~w~l~~~v~vI~g~~~~~~l~enl~a~~~~Ls~e~~~~l~~~~~~~ 278 (298)
T 1vp5_A 219 IAEKYGKTVAQVILRWLTQKGIVAIPKTVRRERMKENISIFDFELTQEDMEKIATLDEGQ 278 (298)
T ss_dssp HHHHHTCCHHHHHHHHHHHTTCEECCCCSCHHHHHHHHCCSSCCCCHHHHHHHHTTCCSS
T ss_pred HHHHhCCCHHHHHHHHHHhCCCEEEeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHhhccc
Confidence 999999999999999999999999999999999999999999999999999999997764
No 30
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=100.00 E-value=7.8e-62 Score=459.36 Aligned_cols=280 Identities=27% Similarity=0.411 Sum_probs=244.5
Q ss_pred cccceEEcCCCCCCccCCcceeeCc-ccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcC---CHHHHHHHHHHH
Q 035739 10 FNIPKLKLSSSSGHLNMPVIGLGCA-VDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEA 85 (335)
Q Consensus 10 ~~m~~~~lg~t~g~~~vs~lg~G~~-~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg---se~~lG~~l~~~ 85 (335)
..| |++||+| | ++||+|||||| .+|+ ..+.+++.++|+.|+++||||||||+.|| +|+.||++|++.
T Consensus 36 ~~m-yr~lG~t-g-~~vs~iglGt~~~~g~------~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~ 106 (367)
T 3lut_A 36 LQF-YRNLGKS-G-LRVSCLGLGTWVTFGG------QITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKK 106 (367)
T ss_dssp CCS-EEESTTS-S-CEEESEEEECTTCCCC------CSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHH
T ss_pred hhc-eeecCCC-C-CcccceeECCccccCC------CCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHHhC
Confidence 348 9999999 9 99999999998 4432 45778899999999999999999999998 599999999986
Q ss_pred HHcCCCCCCCceEEeeccCCC-------CCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCC
Q 035739 86 LRLGLVSSREQLFITSKLWCQ-------NAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMD 158 (335)
Q Consensus 86 ~~~g~~~~R~~~~i~tK~~~~-------~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~ 158 (335)
++ +|+++||+||++.. +.+++.+++++++||++||+||||+|+||||+... .
T Consensus 107 ---~~--~R~~v~I~TK~~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~pd~~~----------------~ 165 (367)
T 3lut_A 107 ---GW--RRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNT----------------P 165 (367)
T ss_dssp ---TC--CGGGCEEEEEESBCCSSGGGBSSCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTS----------------C
T ss_pred ---CC--CCceEEEEeccccCCCCccCCCCCHHHHHHHHHHHHHHhCCCccceEEecCCCCCC----------------C
Confidence 66 79999999999532 34689999999999999999999999999997643 3
Q ss_pred HHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhc----CCCCccccCCCCcccccH---HHHHHHHHcCCeEEEecc
Q 035739 159 YRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFA----TIPPSINQVEMHPVWQQR---KLIEFCKAKGIIVTAYSP 231 (335)
Q Consensus 159 ~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~----~~~~~~~q~~~~~~~~~~---~~l~~~~~~gi~v~a~~p 231 (335)
.+++|++|++|+++||||+||||||+.+++.+++..+ .++|+++|++||+++++. +++++|+++||++++|+|
T Consensus 166 ~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~e~~l~~~~~~~gi~v~a~sp 245 (367)
T 3lut_A 166 MEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSP 245 (367)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCHHHHTHHHHHHHHHCCEEEEECT
T ss_pred HHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHHHHHcCCCCceeeeccccceecchhHhHHHHHHHHcCCeEEEecc
Confidence 8999999999999999999999999999999987754 378999999999999874 899999999999999999
Q ss_pred CCCCCCcCCCCcc-----------------------------CChHHHHHHHHHhCCCHHHHHHHHHhhcC--CEEEeCC
Q 035739 232 LGAVGKIYGSNQV-----------------------------LENEALKEIAKARGKTVAQVSLRWIVEQG--ATVVIKS 280 (335)
Q Consensus 232 l~~~G~l~~~~~~-----------------------------~~~~~l~~la~~~g~s~~q~al~~~l~~~--~~vi~g~ 280 (335)
|++ |+|+++... ...+.++++|+++|+|++|+||+|+++++ ++||+|+
T Consensus 246 L~~-G~Ltgk~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~vI~g~ 324 (367)
T 3lut_A 246 LAC-GIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGA 324 (367)
T ss_dssp TGG-GGGGTTTTTSCCTTSGGGSTTCHHHHHHHTSHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHTSTTEEEEEECC
T ss_pred ccc-ccccCCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCcEEecCC
Confidence 998 998764210 01257899999999999999999999986 4799999
Q ss_pred CCHHHHHHhhccccc--cCCHHHHHHHhccCCCCccCCcccc
Q 035739 281 LNLERMKQNLGIFDW--KLTDDDYDKINQIPQHRLIPSDFWV 320 (335)
Q Consensus 281 ~~~~~l~enl~a~~~--~L~~~~~~~l~~~~~~~~~~~~~~~ 320 (335)
++++||++|++++++ +|+++|++.|+++..+.++.++.|.
T Consensus 325 ~~~~~l~en~~a~~~~~~Ls~e~~~~i~~~~~~~~~~~~~~~ 366 (367)
T 3lut_A 325 SNAEQLMENIGAIQVLPKLSSSIVHEIDSILGNKPYSKKDYR 366 (367)
T ss_dssp SSHHHHHHHHTHHHHGGGCCHHHHHHHHHHHCCCCCC-----
T ss_pred CCHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCCcccccC
Confidence 999999999999986 8999999999999999888887764
No 31
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=100.00 E-value=6.1e-62 Score=454.33 Aligned_cols=279 Identities=25% Similarity=0.391 Sum_probs=248.6
Q ss_pred cceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcC---CHHHHHHHHHHHHHc
Q 035739 12 IPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEALRL 88 (335)
Q Consensus 12 m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg---se~~lG~~l~~~~~~ 88 (335)
|+|++||+| | ++||+||||||+++.. .++..+.+++.++|+.|+++|||+||||+.|| +|+.||++|++.
T Consensus 1 M~~~~lg~t-g-~~vs~lglGt~~~g~~--~~g~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~--- 73 (333)
T 1pz1_A 1 MEYTSIADT-G-IEASRIGLGTWAIGGT--MWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEY--- 73 (333)
T ss_dssp CCEEECTTS-S-CEEESEEEECTGGGCT--TTTCCCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHH---
T ss_pred CCceecCCC-C-CcccCEeEechhhcCC--cCCCCCHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhcC---
Confidence 789999998 9 9999999999999742 12345788999999999999999999999999 999999999975
Q ss_pred CCCCCCCceEEeeccC--CC------CCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHH
Q 035739 89 GLVSSREQLFITSKLW--CQ------NAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYR 160 (335)
Q Consensus 89 g~~~~R~~~~i~tK~~--~~------~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~ 160 (335)
+ +|+++||+||++ .. +.+++.+++++++||++||+||||+|+||||+... ..+
T Consensus 74 ~---~R~~~~i~TK~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~----------------~~~ 134 (333)
T 1pz1_A 74 M---KRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLV----------------PIE 134 (333)
T ss_dssp T---CGGGCEEEEEECEEESSSCEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECSCCTTS----------------CHH
T ss_pred C---CcCeEEEEEeeCccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCCCCCC----------------CHH
Confidence 4 699999999996 22 46789999999999999999999999999997543 378
Q ss_pred HHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCccccc--HHHHHHHHHcCCeEEEeccCCCCCCc
Q 035739 161 GVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQ--RKLIEFCKAKGIIVTAYSPLGAVGKI 238 (335)
Q Consensus 161 ~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~--~~~l~~~~~~gi~v~a~~pl~~~G~l 238 (335)
++|++|++|+++||||+||||||+.++++++++. .+|+++|++||+++++ .+++++|+++||++++|+||++ |.|
T Consensus 135 e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~--~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~L 211 (333)
T 1pz1_A 135 ETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAV--APLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCR-GLL 211 (333)
T ss_dssp HHHHHHHHHHHTTSBSCEEECSCCHHHHHHHHTT--SCCCEECCBCBTTBCGGGGTHHHHHHHTTCEEEEBCTTGG-GTT
T ss_pred HHHHHHHHHHHCCcCCEEEecCCCHHHHHHHHhc--CCcEEEeccccCccCchHHHHHHHHHHcCceEEEeecccC-Ccc
Confidence 9999999999999999999999999999999886 5789999999999987 6899999999999999999998 988
Q ss_pred CCCCc---------------cCCh----------HHHHHHHHHhCC-CHHHHHHHHHhhcC--CEEEeCCCCHHHHHHhh
Q 035739 239 YGSNQ---------------VLEN----------EALKEIAKARGK-TVAQVSLRWIVEQG--ATVVIKSLNLERMKQNL 290 (335)
Q Consensus 239 ~~~~~---------------~~~~----------~~l~~la~~~g~-s~~q~al~~~l~~~--~~vi~g~~~~~~l~enl 290 (335)
+++.. .... +.++++|+++|+ |++|+||+|++++| ++||+|+++++|+++|+
T Consensus 212 tg~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~~s~aqvaL~w~l~~~~v~~vI~g~~~~~~l~en~ 291 (333)
T 1pz1_A 212 TGKMTEEYTFEGDDLRNHDPKFQKPRFKEYLSAVNQLDKLAKTRYGKSVIHLAVRWILDQPGADIALWGARKPGQLEALS 291 (333)
T ss_dssp SSCCCTTCCCCTTCGGGSCGGGSTTTHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHTSTTCCEEEEECCSGGGGTTCT
T ss_pred CCCccccccCCCccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHH
Confidence 75311 1112 688999999999 99999999999998 79999999999999999
Q ss_pred ccccccCCHHHHHHHhccCCCC--ccCCccc
Q 035739 291 GIFDWKLTDDDYDKINQIPQHR--LIPSDFW 319 (335)
Q Consensus 291 ~a~~~~L~~~~~~~l~~~~~~~--~~~~~~~ 319 (335)
++++++|++++++.|+++.... .+.|.+|
T Consensus 292 ~a~~~~L~~e~~~~l~~~~~~~~~~~~g~~~ 322 (333)
T 1pz1_A 292 EITGWTLNSEDQKDINTILENTISDPVGPEF 322 (333)
T ss_dssp TSSSCCCCHHHHHHHHHHHHHHCSSCCCSGG
T ss_pred HhcCCCCCHHHHHHHHHHHhhcccCCccccc
Confidence 9999999999999999987655 5666665
No 32
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=100.00 E-value=9.5e-62 Score=449.43 Aligned_cols=270 Identities=24% Similarity=0.366 Sum_probs=239.1
Q ss_pred cceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcC---CHHHHHHHHHHHHHc
Q 035739 12 IPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEALRL 88 (335)
Q Consensus 12 m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg---se~~lG~~l~~~~~~ 88 (335)
|+|++||+| | ++||+||||||+++...+ ++..+.+++.++|+.|+++||||||||+.|| ||+.||++|++.
T Consensus 1 M~~~~lg~t-g-~~vs~lglGt~~~g~~~~-~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~--- 74 (312)
T 1pyf_A 1 MKKAKLGKS-D-LQVFPIGLGTNAVGGHNL-YPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREF--- 74 (312)
T ss_dssp -CCEECTTS-C-CEECSBCEECTTSSCTTT-CSSCCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTS---
T ss_pred CCeeecCCC-C-CcccCEeEeccccCCCCC-CCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHhhhc---
Confidence 789999998 9 999999999999985211 2345788999999999999999999999999 899999999853
Q ss_pred CCCCCCCceEEeeccC--C------CCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHH
Q 035739 89 GLVSSREQLFITSKLW--C------QNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYR 160 (335)
Q Consensus 89 g~~~~R~~~~i~tK~~--~------~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~ 160 (335)
+|+++||+||++ . .+.+++.+++++++||++||+||||+|++|||+... ..+
T Consensus 75 ----~R~~~~i~TK~g~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~----------------~~~ 134 (312)
T 1pyf_A 75 ----NREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHT----------------PKD 134 (312)
T ss_dssp ----CGGGCEEEEEECEEEETTEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSSS----------------CHH
T ss_pred ----CCCeEEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCCC----------------CHH
Confidence 699999999964 2 357899999999999999999999999999997533 388
Q ss_pred HHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccH--HHHHHHHHcCCeEEEeccCCCCCCc
Q 035739 161 GVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQR--KLIEFCKAKGIIVTAYSPLGAVGKI 238 (335)
Q Consensus 161 ~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~--~~l~~~~~~gi~v~a~~pl~~~G~l 238 (335)
++|++|++|+++||||+||||||++++++++++.. +|+++|++||+++++. +++++|+++||++++|+||++ |.|
T Consensus 135 e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~--~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~L 211 (312)
T 1pyf_A 135 EAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDG--LVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVS-GLL 211 (312)
T ss_dssp HHHHHHHHHHHTTSBSCEEEESCCHHHHHHHTTTS--CCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTTT-TGG
T ss_pred HHHHHHHHHHHCCCcCEEEecCCCHHHHHHHHhhC--CceEEeccCCccccchHHHHHHHHHHcCCeEEEeccccc-ccc
Confidence 99999999999999999999999999999998854 5889999999999874 599999999999999999998 988
Q ss_pred CCCCcc---C----------------------ChHHHHHHHHHhCCCHHHHHHHHHhhcC--CEEEeCCCCHHHHHHhhc
Q 035739 239 YGSNQV---L----------------------ENEALKEIAKARGKTVAQVSLRWIVEQG--ATVVIKSLNLERMKQNLG 291 (335)
Q Consensus 239 ~~~~~~---~----------------------~~~~l~~la~~~g~s~~q~al~~~l~~~--~~vi~g~~~~~~l~enl~ 291 (335)
+++... . ..+.++++|+++|+|++|+||+|++++| ++||+|+++++|+++|++
T Consensus 212 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~~I~g~~~~~~l~en~~ 291 (312)
T 1pyf_A 212 AGKYTEDTTFPEGDLRNEQEHFKGERFKENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIK 291 (312)
T ss_dssp GTCCCTTCCCCTTCGGGGSGGGSHHHHHHHHHHHHTTHHHHHHTTSCHHHHHHHHHHHSTTCCCBCCCCSSHHHHHHHHG
T ss_pred cCCCCCCCCCCCcccccccccccchhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHh
Confidence 754110 0 0256889999999999999999999998 789999999999999999
Q ss_pred cccccCCHHHHHHHhccCC
Q 035739 292 IFDWKLTDDDYDKINQIPQ 310 (335)
Q Consensus 292 a~~~~L~~~~~~~l~~~~~ 310 (335)
+++++|++++++.|+++..
T Consensus 292 a~~~~L~~~~~~~l~~~~~ 310 (312)
T 1pyf_A 292 TADVTLSQEDISFIDKLFA 310 (312)
T ss_dssp GGGCCCCHHHHHHHHHHTC
T ss_pred hccCCCCHHHHHHHHHHhc
Confidence 9999999999999998754
No 33
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=100.00 E-value=4.2e-61 Score=448.55 Aligned_cols=289 Identities=35% Similarity=0.561 Sum_probs=244.1
Q ss_pred ccccceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHc
Q 035739 9 VFNIPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRL 88 (335)
Q Consensus 9 ~~~m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~ 88 (335)
+..++..++|.++| .+||+||||||.+ +.+++.++|+.|++.|||+||||+.||+|+.||++|++.++.
T Consensus 9 ~~~~~~~~~~~~tg-~~vp~lGlGt~~~----------~~~~~~~~v~~Al~~Gi~~~DTA~~YgsE~~vG~al~~~~~~ 77 (334)
T 3krb_A 9 MGTLEAQTQGPGSM-QYPPRLGFGTWQA----------PPEAVQTAVETALMTGYRHIDCAYVYQNEEAIGRAFGKIFKD 77 (334)
T ss_dssp ------------CC-SSCCSBCEECTTC----------CHHHHHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHHHHHC
T ss_pred ccceecCCcCCCCC-CccCCeeeeCCCC----------CHHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHHhhh
Confidence 34466677776658 9999999999985 568899999999999999999999999999999999988777
Q ss_pred ---CCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCC--CCCCCCCCCC---CCCCCCCHH
Q 035739 89 ---GLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSK--PGELGFPEPK---EDLLPMDYR 160 (335)
Q Consensus 89 ---g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~--~~~~~~~~~~---~~~~~~~~~ 160 (335)
|+ +|+++||+||++..+.+++.+++++++||++||+||||+|+||||.... ++....+.+. ..+......
T Consensus 78 ~~~g~--~R~~v~I~TK~~~~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~d~~g~~~~~~~~~~ 155 (334)
T 3krb_A 78 ASSGI--KREDVWITSKLWNYNHRPELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVPLA 155 (334)
T ss_dssp TTSSC--CGGGCEEEEEECGGGCSGGGHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCTTCCSSCBCTTSCBCBCCCCHH
T ss_pred ccCCC--ChhhEEEEeeeCCCCCCHHHHHHHHHHHHHHcCCCceeEEEEccccccccccccccCcccccccccccCCCHH
Confidence 76 8999999999998888899999999999999999999999999996532 1111111100 012235689
Q ss_pred HHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCC
Q 035739 161 GVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYG 240 (335)
Q Consensus 161 ~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~ 240 (335)
++|++|++|+++||||+||||||+.++++++++.++++|+++|++||++.++.+++++|+++||++++|+||++ |.|++
T Consensus 156 e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~c~~~gI~v~ayspL~~-G~L~~ 234 (334)
T 3krb_A 156 DTWRAMEQLVEEGLVKHIGVSNYTVPLLADLLNYAKIKPLVNQIEIHPWHPNDATVKFCLDNGIGVTAYSPMGG-SYADP 234 (334)
T ss_dssp HHHHHHHHHHHHTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCC-SBC--
T ss_pred HHHHHHHHHHHcCCccEEEEecCCHHHHHHHHHhCCCceEEeeeecCcccccHHHHHHHHHcCCEEEEEecCCC-CcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998 98864
Q ss_pred C-------CccCChHHHHHHHHHhCCCHHHHHH-----HHHhhcCCEEEeCCCCHHHHHHhhccccccCCHHHHHHHhcc
Q 035739 241 S-------NQVLENEALKEIAKARGKTVAQVSL-----RWIVEQGATVVIKSLNLERMKQNLGIFDWKLTDDDYDKINQI 308 (335)
Q Consensus 241 ~-------~~~~~~~~l~~la~~~g~s~~q~al-----~~~l~~~~~vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~ 308 (335)
+ ......+.++++|+++|+|++|+|| +|+++ +++||+|+++++|+++|+++++++|+++|++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~l~~iA~~~g~s~aqvaLaw~~~~w~l~-~~~vI~gs~~~~~l~en~~a~~~~Ls~ee~~~l~~l 313 (334)
T 3krb_A 235 RDPSGTQKNVILECKTLKAIADAKGTSPHCVALAWHVKKWNTS-MYSVIPKSQTPARIEANFKCTEVQLSDDDMDAINNI 313 (334)
T ss_dssp -----CCBCGGGGCHHHHHHHHHHTSCHHHHHHHHHHHHSCST-TEEECCBCSSHHHHHHHGGGGGCCCCHHHHHHHHHH
T ss_pred CCCCCCcccchhccHHHHHHHHHhCcCHHHhHHhhHhhhhhcC-CeEEeeCCCCHHHHHHHHhhcCCCCCHHHHHHHHHh
Confidence 3 1344568999999999999999999 88888 899999999999999999999999999999999999
Q ss_pred CCCC
Q 035739 309 PQHR 312 (335)
Q Consensus 309 ~~~~ 312 (335)
..+.
T Consensus 314 ~~~~ 317 (334)
T 3krb_A 314 HLNK 317 (334)
T ss_dssp HHHC
T ss_pred hcCC
Confidence 7654
No 34
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=100.00 E-value=1.3e-60 Score=448.68 Aligned_cols=276 Identities=23% Similarity=0.408 Sum_probs=240.3
Q ss_pred ccccccccceEEcCCCCCCccCCcceeeCc-ccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCC-----HHHH
Q 035739 5 TQSTVFNIPKLKLSSSSGHLNMPVIGLGCA-VDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGT-----EKAL 78 (335)
Q Consensus 5 ~~~~~~~m~~~~lg~t~g~~~vs~lg~G~~-~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygs-----e~~l 78 (335)
.......|+|++||+| | ++||+|||||| .+|. ..+.+++.++|+.|++.|||+||||+.||+ |+.|
T Consensus 27 ~~~~~~~M~~r~lg~t-g-~~vs~lglGt~~~~g~------~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~l 98 (353)
T 3erp_A 27 DENRYHTMEYRRCGRS-G-VKLPAISLGLWHNFGD------TTRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNF 98 (353)
T ss_dssp CTTTTTSCCEEECSSS-S-CEEESEEEECSSSCST------TSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHH
T ss_pred CCCccccceeeecCCC-C-CccCCeeecChhhcCC------CCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCChHHHHH
Confidence 3445556999999999 9 99999999998 5542 347889999999999999999999999996 9999
Q ss_pred HHHHHHHHHcCCCCCCCceEEeeccCCC--------CCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCC
Q 035739 79 GEAIAEALRLGLVSSREQLFITSKLWCQ--------NAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEP 150 (335)
Q Consensus 79 G~~l~~~~~~g~~~~R~~~~i~tK~~~~--------~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~ 150 (335)
|++|++.+. + .|+++||+||++.. ..+++.+++++++||++||+||||+|+||||+...+
T Consensus 99 G~al~~~~~-~---~R~~v~I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~-------- 166 (353)
T 3erp_A 99 GRILQEDFL-P---WRDELIISTKAGYTMWDGPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETP-------- 166 (353)
T ss_dssp HHHHHHHTG-G---GGGGCEEEEEESSCCSSSTTSSTTCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSC--------
T ss_pred HHHHHhhcc-C---CCCeEEEEeeeccCCCCCcccCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCC--------
Confidence 999996210 1 49999999998532 136899999999999999999999999999976433
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhc---CCCCccccCCCCccccc--HHHHHHHHHcCCe
Q 035739 151 KEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFA---TIPPSINQVEMHPVWQQ--RKLIEFCKAKGII 225 (335)
Q Consensus 151 ~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~---~~~~~~~q~~~~~~~~~--~~~l~~~~~~gi~ 225 (335)
.+++|++|++|+++||||+||||||++++++++++.+ +++|+++|++||++++. .+++++|+++||+
T Consensus 167 --------~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~~~~~~~e~~ll~~~~~~gI~ 238 (353)
T 3erp_A 167 --------LKETMKALDHLVRHGKALYVGISNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVG 238 (353)
T ss_dssp --------HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCEEEEECBCBTTBCGGGGTHHHHHHHHTCE
T ss_pred --------HHHHHHHHHHHHHCCCccEEEecCCCHHHHHHHHHHHHHcCCCeEEeeccccccccchhhHHHHHHHHcCCe
Confidence 8899999999999999999999999999999887754 47899999999999885 5799999999999
Q ss_pred EEEeccCCCCCCcCCCCc--------------cCC-----------hHHHHHHHHHhCCCHHHHHHHHHhhcC--CEEEe
Q 035739 226 VTAYSPLGAVGKIYGSNQ--------------VLE-----------NEALKEIAKARGKTVAQVSLRWIVEQG--ATVVI 278 (335)
Q Consensus 226 v~a~~pl~~~G~l~~~~~--------------~~~-----------~~~l~~la~~~g~s~~q~al~~~l~~~--~~vi~ 278 (335)
+++|+||++ |.|+++.. ... .+.+.++|+++|+|++|+||+|++++| ++||+
T Consensus 239 v~a~spL~~-G~Ltg~~~~~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~vI~ 317 (353)
T 3erp_A 239 SIAFSPLAG-GQLTDRYLNGIPEDSRAASGSRFLKPEQITADKLEKVRRLNELAARRGQKLSQMALAWVLRNDNVTSVLI 317 (353)
T ss_dssp EEEBSTTGG-GTSSGGGTC-------------------CCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTTSCCCEEEE
T ss_pred EEEeccccc-cccCCCccCCCCCcccccccccccccccccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCcEEEe
Confidence 999999998 98875310 011 137899999999999999999999999 67999
Q ss_pred CCCCHHHHHHhhccc-cccCCHHHHHHHhccC
Q 035739 279 KSLNLERMKQNLGIF-DWKLTDDDYDKINQIP 309 (335)
Q Consensus 279 g~~~~~~l~enl~a~-~~~L~~~~~~~l~~~~ 309 (335)
|+++++|+++|++++ +++|+++|++.|+++.
T Consensus 318 G~~~~~~l~enl~a~~~~~Ls~ee~~~i~~~~ 349 (353)
T 3erp_A 318 GASKPSQIEDAVGMLANRRFSAAECAEIDAIL 349 (353)
T ss_dssp CCSSHHHHHHHHHGGGGCCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhccCCCCHHHHHHHHHHH
Confidence 999999999999999 8899999999999875
No 35
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=100.00 E-value=5.9e-61 Score=444.51 Aligned_cols=268 Identities=20% Similarity=0.341 Sum_probs=235.1
Q ss_pred cccccceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcC---CHHHHHHHHHH
Q 035739 8 TVFNIPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYG---TEKALGEAIAE 84 (335)
Q Consensus 8 ~~~~m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg---se~~lG~~l~~ 84 (335)
....|+|++||+| | ++||+||||||+++. +.+++.++|+.|++.|||+||||+.|| +|+.||++|++
T Consensus 17 ~~~~M~~r~lg~t-g-~~vs~lglGt~~~g~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~ 86 (317)
T 1ynp_A 17 RGSHMKKRQLGTS-D-LHVSELGFGCMSLGT--------DETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKG 86 (317)
T ss_dssp ---CCCEEECTTS-S-CEEESBCBCSCCCCS--------CHHHHHHHHHHHHHTTCCEEECSCBTTBCCCHHHHHHHHTT
T ss_pred ccCCcceeecCCC-C-CcccCEeEcCcccCC--------CHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhc
Confidence 3456999999999 9 999999999999874 568899999999999999999999998 99999999985
Q ss_pred HHHcCCCCCCCceEEeeccCCC----------CCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCC
Q 035739 85 ALRLGLVSSREQLFITSKLWCQ----------NAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDL 154 (335)
Q Consensus 85 ~~~~g~~~~R~~~~i~tK~~~~----------~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~ 154 (335)
+|+++||+||++.. +.+++.+++++++||++||+||||+|+||||+...+
T Consensus 87 --------~R~~v~I~TK~~~~~~~~~~~~~~~~~~~~v~~~~e~SL~rL~~dyiDl~llH~p~~~~~------------ 146 (317)
T 1ynp_A 87 --------RRQDIILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDP------------ 146 (317)
T ss_dssp --------CGGGCEEEEEC---------------CHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSC------------
T ss_pred --------CCCeEEEEeeeCCCcCCCCccccCCCCHHHHHHHHHHHHHHHCCCcEeEEEecCCCCCCC------------
Confidence 79999999999642 467899999999999999999999999999975432
Q ss_pred CCCCHHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccH-HHHHHHHHcCCeEEEeccCC
Q 035739 155 LPMDYRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQR-KLIEFCKAKGIIVTAYSPLG 233 (335)
Q Consensus 155 ~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~-~~l~~~~~~gi~v~a~~pl~ 233 (335)
..++|++|++|+++||||+||||||+.++++++++... ++++|++||+++++. .++++|+++||++++|+||+
T Consensus 147 ----~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~--~~~~Q~~~nl~~~~~e~l~~~~~~~gI~v~a~spL~ 220 (317)
T 1ynp_A 147 ----IDETIEAFEELKQEGVIRYYGISSIRPNVIKEYLKRSN--IVSIMMQYSILDRRPEEWFPLIQEHGVSVVVRGPVA 220 (317)
T ss_dssp ----HHHHHHHHHHHHHHTSEEEEEEECCCHHHHHHHHHHSC--CCEEEEECBTTBCGGGGGHHHHHHTTCEEEEECTTG
T ss_pred ----hHHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHhcCC--CEEEeccCCchhCCHHHHHHHHHHcCCeEEEecCcc
Confidence 78999999999999999999999999999999999864 689999999999874 49999999999999999999
Q ss_pred CCCCcCCCC-----cc------CChHHHHHHHHHhCCCHHHHHHHHHhhcC--CEEEeCCCCHHHHHHhhcccc-ccCCH
Q 035739 234 AVGKIYGSN-----QV------LENEALKEIAKARGKTVAQVSLRWIVEQG--ATVVIKSLNLERMKQNLGIFD-WKLTD 299 (335)
Q Consensus 234 ~~G~l~~~~-----~~------~~~~~l~~la~~~g~s~~q~al~~~l~~~--~~vi~g~~~~~~l~enl~a~~-~~L~~ 299 (335)
+ |.|+++. .. ...+.++++|+ |+|++|+||+|++++| ++||+|+++++|+++|+++++ ++|++
T Consensus 221 ~-G~L~~~~~~~~~~~~~~~~~~~~~~l~~ia~--g~s~aqvaL~w~l~~~~v~~vI~g~~~~~~l~en~~a~~~~~Ls~ 297 (317)
T 1ynp_A 221 R-GLLSRRPLPEGEGYLNYRYDELKLLRESLPT--DRPLHELALQYCLAHDVVATVAAGASSIDQVKANVQAVEATPLTA 297 (317)
T ss_dssp G-GTTSSSCCCTTCCBTTBCHHHHHHHHHHSCS--SSCHHHHHHHHHHTSTTEEEEECCCSSHHHHHHHHHHHTSCCCCH
T ss_pred C-cccCCCCCccccccccccHHHHHHHHHHHHc--CCCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhccCCCCCH
Confidence 8 9887640 00 01256778887 9999999999999999 789999999999999999998 89999
Q ss_pred HHHHHHhccCCCCcc
Q 035739 300 DDYDKINQIPQHRLI 314 (335)
Q Consensus 300 ~~~~~l~~~~~~~~~ 314 (335)
++++.|+++....+.
T Consensus 298 ee~~~l~~~~~~~~~ 312 (317)
T 1ynp_A 298 EERQHIQKLAKAAVY 312 (317)
T ss_dssp HHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHHhhhcc
Confidence 999999999776553
No 36
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=100.00 E-value=8.6e-60 Score=442.24 Aligned_cols=274 Identities=23% Similarity=0.407 Sum_probs=238.2
Q ss_pred ccccceEEcCCCCCCccCCcceeeCcc-cCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcCC-----HHHHHHHH
Q 035739 9 VFNIPKLKLSSSSGHLNMPVIGLGCAV-DKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYGT-----EKALGEAI 82 (335)
Q Consensus 9 ~~~m~~~~lg~t~g~~~vs~lg~G~~~-~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Ygs-----e~~lG~~l 82 (335)
...|+|++||+| | ++||+||||||. +|. ..+.+++.++|+.|++.||||||||+.||+ |+.||++|
T Consensus 10 ~~~M~~r~lg~t-g-~~vs~lglGt~~~~g~------~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al 81 (346)
T 3n6q_A 10 YGQMQYRYCGKS-G-LRLPALSLGLWHNFGH------VNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLL 81 (346)
T ss_dssp TSSCCEEECTTS-S-CEEESEEEECSSSCST------TSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHH
T ss_pred ccCceeEecCCC-C-CeecCeeecCccccCC------CCCHHHHHHHHHHHHHcCCCEEECccccCCCCCcHHHHHHHHH
Confidence 345999999999 9 999999999975 332 346788999999999999999999999996 99999999
Q ss_pred HHHHHcCCCCCCCceEEeeccCCC--------CCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCC
Q 035739 83 AEALRLGLVSSREQLFITSKLWCQ--------NAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDL 154 (335)
Q Consensus 83 ~~~~~~g~~~~R~~~~i~tK~~~~--------~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~ 154 (335)
++. +.. .|+++||+||++.. ..+++.+++++++||++||+||||+|+||||+...+
T Consensus 82 ~~~---~~~-~R~~~~I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~rL~~dyiDl~~lH~p~~~~~------------ 145 (346)
T 3n6q_A 82 RED---FAA-YRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTP------------ 145 (346)
T ss_dssp HHH---CTT-TGGGCEEEEEECSCCSSSTTSSSSCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSC------------
T ss_pred Hhh---ccc-ccccEEEEEEecccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEeEEEEeCCCCCCC------------
Confidence 975 331 39999999997421 227899999999999999999999999999976433
Q ss_pred CCCCHHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHh---cCCCCccccCCCCccccc--H-HHHHHHHHcCCeEEE
Q 035739 155 LPMDYRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTF---ATIPPSINQVEMHPVWQQ--R-KLIEFCKAKGIIVTA 228 (335)
Q Consensus 155 ~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~---~~~~~~~~q~~~~~~~~~--~-~~l~~~~~~gi~v~a 228 (335)
.+++|++|++|+++||||+||||||++++++++++. .+.+++++|++||++++. . +++++|+++||++++
T Consensus 146 ----~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~~l~~~~~~~gi~v~a 221 (346)
T 3n6q_A 146 ----MEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIA 221 (346)
T ss_dssp ----HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHTTTCCCCEEECBCBTTBCHHHHTTHHHHHHHHTCEEEE
T ss_pred ----HHHHHHHHHHHHHcCCeeEEEeCCCCHHHHHHHHHHHHHcCCCeEEEeccCchhhcCcchhhHHHHHHHcCCeEEE
Confidence 889999999999999999999999999999887654 457889999999999986 2 699999999999999
Q ss_pred eccCCCCCCcCCCCc-------------c----CCh-----------HHHHHHHHHhCCCHHHHHHHHHhhcC--CEEEe
Q 035739 229 YSPLGAVGKIYGSNQ-------------V----LEN-----------EALKEIAKARGKTVAQVSLRWIVEQG--ATVVI 278 (335)
Q Consensus 229 ~~pl~~~G~l~~~~~-------------~----~~~-----------~~l~~la~~~g~s~~q~al~~~l~~~--~~vi~ 278 (335)
|+||++ |+|+++.. . ... +.+.++|+++|+|++|+||+|++++| ++||+
T Consensus 222 ~spL~~-G~L~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~~I~ 300 (346)
T 3n6q_A 222 FTPLAQ-GLLTGKYLNGIPQDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLI 300 (346)
T ss_dssp BSTTGG-GGGGTSCC-----------------------CCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSSTTCSEEEE
T ss_pred eccccC-eecCCCccCCCCCccccccccccccccchhhhhHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHhCCCCcEEEc
Confidence 999998 98876410 0 111 37899999999999999999999998 79999
Q ss_pred CCCCHHHHHHhhccc-cccCCHHHHHHHhccCCC
Q 035739 279 KSLNLERMKQNLGIF-DWKLTDDDYDKINQIPQH 311 (335)
Q Consensus 279 g~~~~~~l~enl~a~-~~~L~~~~~~~l~~~~~~ 311 (335)
|+++++||++|++++ +++|++++++.|+++...
T Consensus 301 g~~~~~~l~en~~a~~~~~Ls~e~~~~i~~~~~~ 334 (346)
T 3n6q_A 301 GASRAEQLEENVQALNNLTFSTKELAQIDQHIAD 334 (346)
T ss_dssp CCSSHHHHHHHHGGGGCCCCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHhhccCCCCCHHHHHHHHHHHhc
Confidence 999999999999998 689999999999998653
No 37
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=2.3e-60 Score=446.40 Aligned_cols=283 Identities=28% Similarity=0.386 Sum_probs=239.1
Q ss_pred cceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCc---------C-CHHHHHHH
Q 035739 12 IPKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMY---------G-TEKALGEA 81 (335)
Q Consensus 12 m~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Y---------g-se~~lG~~ 81 (335)
|+|++||+| | ++||+||||||++|. ..+.+++.++|+.|+++||||||||+.| | +|+.||++
T Consensus 1 M~~~~lg~t-g-~~vs~lglGt~~~g~------~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~~~~~~G~sE~~lG~a 72 (346)
T 1lqa_A 1 MQYHRIPHS-S-LEVSTLGLGTMTFGE------QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNW 72 (346)
T ss_dssp CCEEECTTS-S-CEEESEEEECTTBTT------TBCHHHHHHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHH
T ss_pred CCeeecCCC-C-CeecCeeEEccccCC------CCCHHHHHHHHHHHHHcCCCEEEChhhcCCCccCCCCCccHHHHHHH
Confidence 789999998 9 999999999998863 2367889999999999999999999999 3 89999999
Q ss_pred HHHHHHcCCCCCCCceEEeeccCCC------------CCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCC--CCCC
Q 035739 82 IAEALRLGLVSSREQLFITSKLWCQ------------NAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPG--ELGF 147 (335)
Q Consensus 82 l~~~~~~g~~~~R~~~~i~tK~~~~------------~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~--~~~~ 147 (335)
|++. + +|+++||+||++.. +.+++.+++++++||++||+||||+|+||||....+. ...+
T Consensus 73 l~~~---~---~R~~~~i~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~ 146 (346)
T 1lqa_A 73 LAKH---G---SREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGY 146 (346)
T ss_dssp HHHH---C---CGGGCEEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSC
T ss_pred Hhhc---C---CCceEEEEEeECCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCccccccccccccc
Confidence 9975 5 69999999999642 2578999999999999999999999999999542210 0001
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhc---C-CCCccccCCCCccccc--HHHHHHHHH
Q 035739 148 PEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFA---T-IPPSINQVEMHPVWQQ--RKLIEFCKA 221 (335)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~---~-~~~~~~q~~~~~~~~~--~~~l~~~~~ 221 (335)
...+.. ......++|++|++|+++||||+||||||+.++++++++.+ + .+|+++|++||+++++ .+++++|++
T Consensus 147 ~~~d~~-~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~l~~~~~~ 225 (346)
T 1lqa_A 147 SWTDSA-PAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQY 225 (346)
T ss_dssp CCCSSC-CSSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHH
T ss_pred cccccc-cCCCHHHHHHHHHHHHHcCCeEEEEecCCCHHHHHHHHHHHHHcCCCCceEEeccCChhhchhHHHHHHHHHH
Confidence 000000 02347899999999999999999999999999888876643 3 4689999999999986 689999999
Q ss_pred cCCeEEEeccCCCCCCcCCCCc----c-------------CC-------hHHHHHHHHHhCCCHHHHHHHHHhhcC--CE
Q 035739 222 KGIIVTAYSPLGAVGKIYGSNQ----V-------------LE-------NEALKEIAKARGKTVAQVSLRWIVEQG--AT 275 (335)
Q Consensus 222 ~gi~v~a~~pl~~~G~l~~~~~----~-------------~~-------~~~l~~la~~~g~s~~q~al~~~l~~~--~~ 275 (335)
+||++++|+||++ |.|+++.. . .. .+.+.++|+++|+|++|+||+|++++| ++
T Consensus 226 ~gi~v~a~spL~~-G~L~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~ 304 (346)
T 1lqa_A 226 EGVELLAYSCLGF-GTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVAS 304 (346)
T ss_dssp HCCEEEEECTTGG-GGGGTTTGGGCCCTTCHHHHCTTCCTTCSHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTCTTEEE
T ss_pred cCCeEEEecchhh-hhhcCccccccCCCcchhhcchhhcccccHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHhCCCCeE
Confidence 9999999999998 98875310 0 01 137899999999999999999999999 57
Q ss_pred EEeCCCCHHHHHHhhccccccCCHHHHHHHhccCC
Q 035739 276 VVIKSLNLERMKQNLGIFDWKLTDDDYDKINQIPQ 310 (335)
Q Consensus 276 vi~g~~~~~~l~enl~a~~~~L~~~~~~~l~~~~~ 310 (335)
||+|+++++|+++|+++++++|++++++.|+++..
T Consensus 305 ~I~g~~~~~~l~enl~a~~~~L~~e~~~~l~~~~~ 339 (346)
T 1lqa_A 305 TLLGATTMDQLKTNIESLHLELSEDVLAEIEAVHQ 339 (346)
T ss_dssp EEECCSSHHHHHHHHGGGGCCCCHHHHHHHHHHHH
T ss_pred EEeCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999865
No 38
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=100.00 E-value=3.8e-59 Score=427.30 Aligned_cols=248 Identities=21% Similarity=0.237 Sum_probs=213.5
Q ss_pred ccccceEEcCCCCCCccCCcceeeCcccCccc-----cccCCCChHHHHHHHHHHHHcCCCEeeCCCCcC-CHHHHHHHH
Q 035739 9 VFNIPKLKLSSSSGHLNMPVIGLGCAVDKCLR-----CAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYG-TEKALGEAI 82 (335)
Q Consensus 9 ~~~m~~~~lg~t~g~~~vs~lg~G~~~~~~~~-----~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg-se~~lG~~l 82 (335)
...|+|++||+| | ++||+||||||++++.+ ..++..+.+++.++|+.|++.|||+||||+.|| +|+.||++|
T Consensus 27 ~~~m~~r~Lg~t-g-~~vs~lglGt~~~g~~~~~~~~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~sE~~lG~al 104 (292)
T 4exb_A 27 TLHDLHRPLGDT-G-LAVSPLGLGTVKFGRDQGVKYPSGFTIPDDREAADLLALARDLGINLIDTAPAYGRSEERLGPLL 104 (292)
T ss_dssp CSTTCCEECTTS-S-CEECSEEEECSTTTCC---------CCCCHHHHHHHHHHHHHTTCCEEECCTTSTTHHHHHHHHH
T ss_pred CCCceeeecCCC-C-CccCCEeEcccccCCCcccccccccCCCCHHHHHHHHHHHHHcCCCEEEcCCccchHHHHHHHHh
Confidence 445999999999 9 99999999999997521 123456789999999999999999999999999 999999999
Q ss_pred HHHHHcCCCCCCCceEEeeccCC--------CCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCC
Q 035739 83 AEALRLGLVSSREQLFITSKLWC--------QNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDL 154 (335)
Q Consensus 83 ~~~~~~g~~~~R~~~~i~tK~~~--------~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~ 154 (335)
++ +|+++||+||++. .+.+++.+++++++||++||+||||+|++|||....
T Consensus 105 ~~--------~R~~v~I~TK~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~d~------------- 163 (292)
T 4exb_A 105 RG--------QREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDL------------- 163 (292)
T ss_dssp TT--------TGGGCEEEEEESBC--CCSCCBCCCHHHHHHHHHHHHHHTTSSCEEEEEEECCSCHH-------------
T ss_pred cc--------CCCcEEEEEeeccccCCCCccCCCCHHHHHHHHHHHHHHhCCCceeEEEEecCCCCc-------------
Confidence 85 7999999999983 246789999999999999999999999999993210
Q ss_pred CCCCHH-HHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccH-HHHHHHHHcCCeEEEeccC
Q 035739 155 LPMDYR-GVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQR-KLIEFCKAKGIIVTAYSPL 232 (335)
Q Consensus 155 ~~~~~~-~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~-~~l~~~~~~gi~v~a~~pl 232 (335)
..... ++|++|++|+++||||+||||||+.++++++++. |+++|++||+++++. +++++|+++||++++|+||
T Consensus 164 -~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~----~~~~Q~~~~~~~~~~~~l~~~~~~~gi~v~a~spL 238 (292)
T 4exb_A 164 -DILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALRE----GDCAMVTYNLNERAERPVIEYAAAHAKGILVKKAL 238 (292)
T ss_dssp -HHHHHSSHHHHHHHHHHTTSEEEEEEECSSHHHHHHHHHH----SSEEEEECSSSCCTTHHHHHHHHHTTCEEEEECCS
T ss_pred -cccchHHHHHHHHHHHHCCCceEEEeCCCCHHHHHHHHHh----hcEEeeccccccCCHHHHHHHHHHCCcEEEEeccc
Confidence 01133 7999999999999999999999999999999987 789999999999985 9999999999999999999
Q ss_pred CCCCCcCCCCccCChHHHHHHHHHhCCCHHHHHHHHHhhcC--CEEEeCCCCHHHHHHhhccccccCCHH
Q 035739 233 GAVGKIYGSNQVLENEALKEIAKARGKTVAQVSLRWIVEQG--ATVVIKSLNLERMKQNLGIFDWKLTDD 300 (335)
Q Consensus 233 ~~~G~l~~~~~~~~~~~l~~la~~~g~s~~q~al~~~l~~~--~~vi~g~~~~~~l~enl~a~~~~L~~~ 300 (335)
++ |.|. .++|+|++|+||+|++++| ++||+|+++++|+++|++++++.||+|
T Consensus 239 ~~-G~L~---------------~~~g~t~aqvaL~w~l~~~~v~~vI~g~~~~~~l~en~~a~~~~Ls~~ 292 (292)
T 4exb_A 239 AS-GHAC---------------LGAGQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAAQALKKA 292 (292)
T ss_dssp CC------------------------CCHHHHHHHHHHHSTTCCEEEECCCCHHHHHHHHHHHHHHHC--
T ss_pred cC-CccC---------------CCCCCCHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHHhhccCCCC
Confidence 98 8763 2489999999999999999 899999999999999999999988875
No 39
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=100.00 E-value=8.5e-58 Score=425.60 Aligned_cols=262 Identities=23% Similarity=0.295 Sum_probs=230.5
Q ss_pred cCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcC---CHHHHHHHHHHHHHcCCCCCCCceEEee
Q 035739 25 NMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEALRLGLVSSREQLFITS 101 (335)
Q Consensus 25 ~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg---se~~lG~~l~~~~~~g~~~~R~~~~i~t 101 (335)
.+|+||||||++|. ..+.+++.++|+.|+++||||||||+.|| +|+.||++|++. +. .|+++||+|
T Consensus 4 ~~~~lglGt~~~g~------~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~~--~r~~~~i~T 72 (327)
T 1gve_A 4 ARPATVLGAMEMGR------RMDVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGL---GR--SGCKVKIAT 72 (327)
T ss_dssp CCCEEEEECTTBTT------TBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHTTSCCCT---TS--TTCCSEEEE
T ss_pred CCCCeEEcccccCC------CCCHHHHHHHHHHHHHcCCCEEEchhhcCCCchHHHHHHHHhhc---CC--CCCeEEEEE
Confidence 57999999999974 24778899999999999999999999994 999999999742 32 478899999
Q ss_pred ccCCC---CCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEE
Q 035739 102 KLWCQ---NAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSI 178 (335)
Q Consensus 102 K~~~~---~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~i 178 (335)
|++.. +.+++.+++++++||++||+||||+|+||||+...+ ..++|++|++|+++||||+|
T Consensus 73 K~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~----------------~~e~~~al~~l~~~Gkir~i 136 (327)
T 1gve_A 73 KAAPMFGKTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGTP----------------IEETLQACHQLHQEGKFVEL 136 (327)
T ss_dssp EECSCTTCCSSHHHHHHHHHHHHHHTTCSCEEEEEECSCCTTSC----------------HHHHHHHHHHHHHTTSEEEE
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHCCCeEeEEEecCCCCCCC----------------HHHHHHHHHHHHhCCceeEE
Confidence 99765 578999999999999999999999999999976432 78999999999999999999
Q ss_pred EecCccHHHHHHHHHhcC----CCCccccCCCCccccc--HHHHHHHHHcCCeEEEeccCCCCCCcCCCCc---------
Q 035739 179 GLSNFSRKKIETILTFAT----IPPSINQVEMHPVWQQ--RKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQ--------- 243 (335)
Q Consensus 179 Gvs~~~~~~l~~~~~~~~----~~~~~~q~~~~~~~~~--~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~--------- 243 (335)
|||||+.++++++++.+. ++|+++|++||+++++ .+++++|+++||++++|+||++ |.|+++..
T Consensus 137 GvSn~~~~~l~~~~~~~~~~g~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~Ltg~~~~~~~~~~~~ 215 (327)
T 1gve_A 137 GLSNYVSWEVAEICTLCKKNGWIMPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPLAG-GLLTGRYKYQDKDGKNP 215 (327)
T ss_dssp EEESCCHHHHHHHHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGG-GGGGTCCCGGGGGSCCC
T ss_pred EecCCCHHHHHHHHHHHHHcCCCCeEEEeccCcceecccHHHHHHHHHHcCCeEEEeccccc-ccccCcccCCCccccCC
Confidence 999999999999887654 7889999999999987 6899999999999999999998 98876411
Q ss_pred --cCC--------------------hHHHHHHHHH----hCCCHHHHHHHHHhhcC-------CEEEeCCCCHHHHHHhh
Q 035739 244 --VLE--------------------NEALKEIAKA----RGKTVAQVSLRWIVEQG-------ATVVIKSLNLERMKQNL 290 (335)
Q Consensus 244 --~~~--------------------~~~l~~la~~----~g~s~~q~al~~~l~~~-------~~vi~g~~~~~~l~enl 290 (335)
... .+.++++|++ +|+|++|+||+|+++++ ++||+|+++++|+++|+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~~~~~g~s~aqvaL~w~l~~~~v~~~~g~~~I~g~~~~~~l~en~ 295 (327)
T 1gve_A 216 ESRFFGNPFSQLYMDRYWKEEHFNGIALVEKALKTTYGPTAPSMISAAVRWMYHHSQLKGTQGDAVILGMSSLEQLEQNL 295 (327)
T ss_dssp SSSSSSCTTHHHHHHHHCSHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHTSSCCGGGTCEEEECCSSHHHHHHHH
T ss_pred CccccccccchhhhhcccChHHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHhCCCccccCCCeEEECCCCHHHHHHHH
Confidence 111 1678999999 99999999999999976 58999999999999999
Q ss_pred ccccc-cCCHHHHHHHhccCCCCcc
Q 035739 291 GIFDW-KLTDDDYDKINQIPQHRLI 314 (335)
Q Consensus 291 ~a~~~-~L~~~~~~~l~~~~~~~~~ 314 (335)
+++++ +|++++++.|+++....+.
T Consensus 296 ~a~~~~~L~~e~~~~l~~~~~~~~~ 320 (327)
T 1gve_A 296 ALVEEGPLEPAVVDAFDQAWNLVAH 320 (327)
T ss_dssp HHTTCCCCCHHHHHHHHHHHHHHGG
T ss_pred HhcCCCCCCHHHHHHHHHHHHhccC
Confidence 99987 8999999999998765443
No 40
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=100.00 E-value=2.7e-57 Score=426.93 Aligned_cols=263 Identities=24% Similarity=0.272 Sum_probs=228.5
Q ss_pred CCccCCcceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCCCcC---CHHHHHHHHHHHHHcCCCCCCCceE
Q 035739 22 GHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEALRLGLVSSREQLF 98 (335)
Q Consensus 22 g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg---se~~lG~~l~~~~~~g~~~~R~~~~ 98 (335)
+ ..||+||||||++|. ..+.+++.++|+.|+++||||||||+.|| +|+.||++|++. .+ .|+++|
T Consensus 35 ~-~~ip~lglGt~~~g~------~~~~~~~~~~l~~Al~~Gin~~DTA~~Yg~G~sE~~lG~al~~~--~~---~r~~v~ 102 (360)
T 2bp1_A 35 P-PPRVASVLGTMEMGR------RMDAPASAAAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGL--GG---GDCRVK 102 (360)
T ss_dssp ----CCEEEEECTTBTT------TBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHTSCCCT--TS---TTCCCE
T ss_pred C-CCCCCEEECchhhCC------CCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHhhc--cC---CCCeEE
Confidence 5 789999999999974 23678899999999999999999999994 899999999631 13 356799
Q ss_pred EeeccCCC---CCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCc
Q 035739 99 ITSKLWCQ---NAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLT 175 (335)
Q Consensus 99 i~tK~~~~---~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gki 175 (335)
|+||++.. +.+++.+++++++||++||+||||+|+||||+... ..+++|++|++|+++|||
T Consensus 103 I~TK~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~----------------~~~e~~~aL~~l~~~Gki 166 (360)
T 2bp1_A 103 IATKANPWDGKSLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGT----------------PVEETLHACQRLHQEGKF 166 (360)
T ss_dssp EEEEECCCTTCCSSHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTS----------------CHHHHHHHHHHHHHTTSE
T ss_pred EEeeecCCCCCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCC----------------CHHHHHHHHHHHHHCCCc
Confidence 99999765 67899999999999999999999999999997643 278999999999999999
Q ss_pred cEEEecCccHHHHHHHHHhcC----CCCccccCCCCccccc--HHHHHHHHHcCCeEEEeccCCCCCCcCCCCc------
Q 035739 176 KSIGLSNFSRKKIETILTFAT----IPPSINQVEMHPVWQQ--RKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQ------ 243 (335)
Q Consensus 176 r~iGvs~~~~~~l~~~~~~~~----~~~~~~q~~~~~~~~~--~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~------ 243 (335)
|+||||||+.++++++++.+. ++|+++|++||+++++ .+++++|+++||++++|+||++ |.|+++..
T Consensus 167 r~iGvSn~~~~~l~~~~~~~~~~g~~~~~~~Q~~yn~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~Ltg~~~~~~~~~ 245 (360)
T 2bp1_A 167 VELGLSNYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQVETELFPCLRHFGLRFYAYNPLAG-GLLTGKYKYEDKDG 245 (360)
T ss_dssp EEEEEESCCHHHHHHHHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGG-GGGGTCCCGGGGTT
T ss_pred cEEEEeCCCHHHHHHHHHHHHHcCCCCceEEeeccchhhccchhhHHHHHHHcCCeEEEeccccc-CcccCCccCcCccc
Confidence 999999999999999887654 6889999999999987 6899999999999999999998 98876411
Q ss_pred -----cC--------------------ChHHHHHHHHH----hCCCHHHHHHHHHhhcC-------CEEEeCCCCHHHHH
Q 035739 244 -----VL--------------------ENEALKEIAKA----RGKTVAQVSLRWIVEQG-------ATVVIKSLNLERMK 287 (335)
Q Consensus 244 -----~~--------------------~~~~l~~la~~----~g~s~~q~al~~~l~~~-------~~vi~g~~~~~~l~ 287 (335)
.. ..+.++++|++ +|+|++|+||+|+++++ +++|+|+++++||+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~~~~~g~s~aqvaL~w~l~~~~v~~~~g~~vI~G~~~~~~l~ 325 (360)
T 2bp1_A 246 KQPVGRFFGNSWAETYRNRFWKEHHFEAIALVEKALQAAYGASAPSVTSAALRWMYHHSQLQGAHGDAVILGMSSLEQLE 325 (360)
T ss_dssp TCCSBTTBSSTTHHHHHHHHCCHHHHHHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHSSCCGGGTCEEEECCSSHHHHH
T ss_pred ccccccccccccchhhhhcccchhHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCcccccCCCeEEECCCCHHHHH
Confidence 11 11578899999 99999999999999865 58999999999999
Q ss_pred Hhhccccc-cCCHHHHHHHhccCCCCc
Q 035739 288 QNLGIFDW-KLTDDDYDKINQIPQHRL 313 (335)
Q Consensus 288 enl~a~~~-~L~~~~~~~l~~~~~~~~ 313 (335)
+|++++++ +|++++++.|+++....+
T Consensus 326 enl~a~~~~~L~~e~~~~l~~~~~~~~ 352 (360)
T 2bp1_A 326 QNLAATEEGPLEPAVVDAFNQAWHLVA 352 (360)
T ss_dssp HHHHHHTSCCCCHHHHHHHHHHHHHHG
T ss_pred HHHHhcCCCCCCHHHHHHHHHHHHhcc
Confidence 99999987 899999999999866544
No 41
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=97.86 E-value=4.3e-06 Score=85.33 Aligned_cols=131 Identities=13% Similarity=0.083 Sum_probs=91.9
Q ss_pred HHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEE--ecCccH---H-----
Q 035739 117 LKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIG--LSNFSR---K----- 186 (335)
Q Consensus 117 ~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iG--vs~~~~---~----- 186 (335)
++.||.+|++||+|| ++|..+.. ...++++++++++.+|+|+++| +++|.. .
T Consensus 231 ~e~sL~~L~~d~vdI-~I~Ghn~~-----------------~~~~iLeaa~~a~~~g~I~~iG~c~T~he~lr~~~~~~~ 292 (807)
T 3cf4_A 231 VEIGMGTIDKSKPFL-CVIGHNVA-----------------GVTYMMDYMEDNNLTDKMEIAGLCCTAIDLTRYKEADRR 292 (807)
T ss_dssp EEESGGGSCTTSCEE-EEESSCCH-----------------HHHHHHHHHHHTTCTTTSEEEEESHHHHHHTTTTCTTCC
T ss_pred eeccccccCCCCceE-EEECCcCc-----------------cHHHHHHHHHHCCCCCCCcEEeeccCCCchhhccccccc
Confidence 567788999999999 47754221 1457899999999999999995 444443 1
Q ss_pred -----------HHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEeccCCCCCCcCCCCccCChHHHHHHHH
Q 035739 187 -----------KIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEIAK 255 (335)
Q Consensus 187 -----------~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~la~ 255 (335)
...+.++... +.++++.|+... .++++.|.++|++|++++|..+.|.+...
T Consensus 293 ~~~~pv~G~~~~~~~~i~tGa--~dv~vV~~n~i~--~~ll~~a~~~Gm~Vit~sp~~~~Grpd~~-------------- 354 (807)
T 3cf4_A 293 PPYAKVIGSMSKELKVIRSGM--PDVIVVDEQCVR--GDIVPEAQKLKIPVIASNPKIMYGLPNRT-------------- 354 (807)
T ss_dssp CCCSEEEESGGGHHHHHHHTC--CSEEEECSSSCC--TTHHHHHHHTTCCEEECSTTCCTTCCBCT--------------
T ss_pred cccccccccHHHHHHHhhcCC--CeEEEEEecCCC--hHHHHHHHHCCCEEEEechhhhcCCCccc--------------
Confidence 2334455333 567777777654 37889999999999999999863443210
Q ss_pred HhCCCHHHHHHHHHhhcC--CEEEeCCCCHHHH
Q 035739 256 ARGKTVAQVSLRWIVEQG--ATVVIKSLNLERM 286 (335)
Q Consensus 256 ~~g~s~~q~al~~~l~~~--~~vi~g~~~~~~l 286 (335)
+ .+.+.+++|+++++ .++.+|+.++.++
T Consensus 355 --d-~~~~~~le~LLs~~~~~~l~~g~~~~~el 384 (807)
T 3cf4_A 355 --D-ADVDETMEELKSGKIPGCVMLDYDKLGEL 384 (807)
T ss_dssp --T-SCHHHHHHHHHTTSSSEEECCCHHHHHHH
T ss_pred --c-chHHHHHHHHHhCCCCCceeeCCccHHHH
Confidence 1 23778999999987 4566776666664
No 42
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=77.23 E-value=23 Score=32.48 Aligned_cols=151 Identities=13% Similarity=0.057 Sum_probs=89.2
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCc-CCH-HHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHh
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMY-GTE-KALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSAL 124 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Y-gse-~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~L 124 (335)
+.++..+..+++.+.|++.|..=-.- ..+ ..+=+++++. --+++-|..+.. ..++.+...+-++ .|+.+
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v~avr~a-------~g~d~~l~vDan-~~~~~~~a~~~~~-~l~~~ 234 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPVADDGPAAEIANLRQV-------LGPQAKIAADMH-WNQTPERALELIA-EMQPF 234 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHHHHHHHH-------HCTTSEEEEECC-SCSCHHHHHHHHH-HHGGG
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCCCChHHHHHHHHHHHH-------hCCCCEEEEECC-CCCCHHHHHHHHH-HHhhc
Confidence 56777788888999999998742110 011 1122344543 123566666653 2344555544444 37777
Q ss_pred CCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecC-ccHHHHHHHHHhcCCCCcccc
Q 035739 125 QMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSN-FSRKKIETILTFATIPPSINQ 203 (335)
Q Consensus 125 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~-~~~~~l~~~~~~~~~~~~~~q 203 (335)
+++++ ..|.. .+-++.+.++++.-.|--++--+ ++.+.+.++++.... .++|
T Consensus 235 ~i~~i-----EqP~~--------------------~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~--d~v~ 287 (388)
T 2nql_A 235 DPWFA-----EAPVW--------------------TEDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRI--AIVQ 287 (388)
T ss_dssp CCSCE-----ECCSC--------------------TTCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCC--SEEC
T ss_pred CCCEE-----ECCCC--------------------hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCC--CEEE
Confidence 76654 44421 12367778888776666555443 468888888876543 4565
Q ss_pred CCCCc--ccccHHHHHHHHHcCCeEEEeccCC
Q 035739 204 VEMHP--VWQQRKLIEFCKAKGIIVTAYSPLG 233 (335)
Q Consensus 204 ~~~~~--~~~~~~~l~~~~~~gi~v~a~~pl~ 233 (335)
+..+- +..-.++..+|+++|+.++..+.+.
T Consensus 288 ik~~~GGit~~~~i~~~A~~~g~~~~~h~~~e 319 (388)
T 2nql_A 288 PEMGHKGITNFIRIGALAAEHGIDVIPHATVG 319 (388)
T ss_dssp CCHHHHCHHHHHHHHHHHHHHTCEECCCCCSS
T ss_pred ecCCCCCHHHHHHHHHHHHHcCCeEEeecCCC
Confidence 54433 1112578899999999988865444
No 43
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=76.66 E-value=20 Score=33.03 Aligned_cols=153 Identities=10% Similarity=0.058 Sum_probs=92.1
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCCHH--HHHHHHHHHHHcCCCCCCCceEEe-eccCCCCCChhhHHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGTEK--ALGEAIAEALRLGLVSSREQLFIT-SKLWCQNAHRDHVIPALKKSLSA 123 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~--~lG~~l~~~~~~g~~~~R~~~~i~-tK~~~~~~~~~~i~~~~e~sL~~ 123 (335)
+.++..+..+.+++.|++.|..=-....+. ..=+++++.+ -+++-|. ..... ..+.+...+ +-+.|+.
T Consensus 142 ~~e~~~~~a~~~~~~G~~~~KiKvG~~~~~d~~~v~avR~a~-------g~~~~l~~vDan~-~~~~~~A~~-~~~~l~~ 212 (391)
T 3gd6_A 142 EVESNLDVVRQKLEQGFDVFRLYVGKNLDADEEFLSRVKEEF-------GSRVRIKSYDFSH-LLNWKDAHR-AIKRLTK 212 (391)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHH-------GGGCEEEEEECTT-CSCHHHHHH-HHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeCCCHHHHHHHHHHHHHHc-------CCCCcEEEecCCC-CcCHHHHHH-HHHHHHh
Confidence 457777788888999999987432222111 2224555542 2445555 55532 233333222 2234444
Q ss_pred hCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCcccc
Q 035739 124 LQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQ 203 (335)
Q Consensus 124 Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q 203 (335)
+++ ++.++..|... +-++.+.++++.-.|.- |=+-++..++.++++.... .++|
T Consensus 213 ~~i---~~~~iEqP~~~--------------------~d~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~~~~--d~v~ 266 (391)
T 3gd6_A 213 YDL---GLEMIESPAPR--------------------NDFDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKKDAI--DIFN 266 (391)
T ss_dssp CCS---SCCEEECCSCT--------------------TCHHHHHHHHHHCSSCE-EEECCCHHHHHHHHHHTCC--SEEE
T ss_pred cCC---CcceecCCCCh--------------------hhHHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHcCCC--CEEE
Confidence 443 33667766331 12567778887766665 9899999999999986654 3555
Q ss_pred CCCCcc---cccHHHHHHHHHcCCeEEEeccCCC
Q 035739 204 VEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 204 ~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
+..+-+ ..-.++..+|+++|+.++..+.+.+
T Consensus 267 ~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 300 (391)
T 3gd6_A 267 ISPVFIGGLTSAKKAAYAAEVASKDVVLGTTQEL 300 (391)
T ss_dssp ECHHHHTSHHHHHHHHHHHHHTTCEEEECCCCCC
T ss_pred ECchhcCCHHHHHHHHHHHHHcCCEEEecCCCcc
Confidence 554332 1226789999999999998765543
No 44
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=76.33 E-value=27 Score=31.72 Aligned_cols=148 Identities=17% Similarity=0.141 Sum_probs=86.9
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcC-CHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhC
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYG-TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQ 125 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg-se~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg 125 (335)
+.++..+..+++.+.|++.|..=-.-. ..+.+ +++++. - +++-|..... ..++.+. .+-++ .|+.++
T Consensus 148 ~~~~~~~~a~~~~~~G~~~iKik~~~~~d~~~v-~avr~a-------~-~~~~l~vDan-~~~~~~~-~~~~~-~l~~~~ 215 (375)
T 1r0m_A 148 DEQATVDLVRRHVEQGYRRIKLKIKPGWDVQPV-RATREA-------F-PDIRLTVDAN-SAYTLAD-AGRLR-QLDEYD 215 (375)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEECBTTBSHHHH-HHHHHH-------C-TTSCEEEECT-TCCCGGG-HHHHH-TTGGGC
T ss_pred CHHHHHHHHHHHHHhcccEEEEecChHHHHHHH-HHHHHH-------c-CCCeEEEeCC-CCCCHHH-HHHHH-HHHhCC
Confidence 566677788888999999876421111 23333 566664 3 4555555542 2344555 33333 356665
Q ss_pred CCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCccccC
Q 035739 126 MEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSINQV 204 (335)
Q Consensus 126 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~ 204 (335)
+++ +..|... +-++.+.++++.-.|- ..|=+-++..++.++++.... .++|+
T Consensus 216 i~~-----iEqP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~--d~v~i 268 (375)
T 1r0m_A 216 LTY-----IEQPLAW--------------------DDLVDHAELARRIRTPLCLDESVASASDARKALALGAG--GVINL 268 (375)
T ss_dssp CSC-----EECCSCT--------------------TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSC--SEEEE
T ss_pred CcE-----EECCCCc--------------------ccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCC--CEEEE
Confidence 554 5555321 1245566666654444 344455678899999886654 46665
Q ss_pred CCCcc---cccHHHHHHHHHcCCeEEEeccCC
Q 035739 205 EMHPV---WQQRKLIEFCKAKGIIVTAYSPLG 233 (335)
Q Consensus 205 ~~~~~---~~~~~~l~~~~~~gi~v~a~~pl~ 233 (335)
..+.+ ..-.++...|+++|+.++..+.+.
T Consensus 269 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 300 (375)
T 1r0m_A 269 KVARVGGHAESRRVHDVAQSFGAPVWCGGMLE 300 (375)
T ss_dssp CTTTTTSHHHHHHHHHHHHHTTCCEEECCCCC
T ss_pred CcchhcCHHHHHHHHHHHHHcCCcEEecCccc
Confidence 54443 222678999999999976655444
No 45
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=74.98 E-value=48 Score=29.96 Aligned_cols=146 Identities=12% Similarity=0.134 Sum_probs=85.8
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCC----HHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGT----EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 122 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygs----e~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~ 122 (335)
+.++..+..+++.+.|++.|..=-.-++ .+.+ +++++.+ | +++-|..+.. ..++.+...+-++ .|+
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v-~avr~a~--G-----~d~~l~vDan-~~~~~~~a~~~~~-~l~ 215 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRV-SALREHL--G-----DSFPLMVDAN-MKWTVDGAIRAAR-ALA 215 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHH-HHHHHHH--C-----TTSCEEEECT-TCSCHHHHHHHHH-HHG
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHH-HHHHHHh--C-----CCCeEEEECC-CCCCHHHHHHHHH-HHH
Confidence 5677778888889999999874322212 1222 4445432 2 2444555653 2344555444433 366
Q ss_pred HhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEE-ecCccHHHHHHHHHhcCCCCcc
Q 035739 123 ALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIG-LSNFSRKKIETILTFATIPPSI 201 (335)
Q Consensus 123 ~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iG-vs~~~~~~l~~~~~~~~~~~~~ 201 (335)
.+++++ +..|... +-++.+.++++.-.|--++ =+-++.+.+.++++.... .+
T Consensus 216 ~~~i~~-----iEqP~~~--------------------~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~--d~ 268 (371)
T 2ovl_A 216 PFDLHW-----IEEPTIP--------------------DDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSL--TL 268 (371)
T ss_dssp GGCCSE-----EECCSCT--------------------TCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCC--SE
T ss_pred hcCCCE-----EECCCCc--------------------ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCC--CE
Confidence 666554 4555221 1256666666654555444 344568889999887654 46
Q ss_pred ccCCCCcc---cccHHHHHHHHHcCCeEEEe
Q 035739 202 NQVEMHPV---WQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 202 ~q~~~~~~---~~~~~~l~~~~~~gi~v~a~ 229 (335)
+|+..+-+ ..-.++..+|+++|+.++..
T Consensus 269 v~ik~~~~GGi~~~~~i~~~A~~~gi~~~~h 299 (371)
T 2ovl_A 269 PEPDVSNIGGYTTFRKVAALAEANNMLLTSH 299 (371)
T ss_dssp ECCCTTTTTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred EeeCccccCCHHHHHHHHHHHHHcCCeEccc
Confidence 66655443 22267899999999998884
No 46
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=73.96 E-value=54 Score=30.07 Aligned_cols=149 Identities=14% Similarity=0.132 Sum_probs=86.9
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCC------C-----------cC--C-H---HH---HHHHHHHHHHcCCCCCCCceEEe
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAA------M-----------YG--T-E---KA---LGEAIAEALRLGLVSSREQLFIT 100 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~------~-----------Yg--s-e---~~---lG~~l~~~~~~g~~~~R~~~~i~ 100 (335)
+.++..+...++.+.|++.|..=. . || . + +. +=+++++. --+++-|.
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a-------~G~d~~l~ 222 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREA-------MGDDADII 222 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHH-------HCSSSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHh-------cCCCCEEE
Confidence 667778888889999999987421 2 22 1 1 11 11233432 12356666
Q ss_pred eccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEe
Q 035739 101 SKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGL 180 (335)
Q Consensus 101 tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGv 180 (335)
.... ..++.+...+-++. |+.+ ++.++..|... +-++.+.++++.-.|--++-
T Consensus 223 vDan-~~~~~~~ai~~~~~-l~~~-----~i~~iE~P~~~--------------------~~~~~~~~l~~~~~iPIa~d 275 (410)
T 2gl5_A 223 VEIH-SLLGTNSAIQFAKA-IEKY-----RIFLYEEPIHP--------------------LNSDNMQKVSRSTTIPIATG 275 (410)
T ss_dssp EECT-TCSCHHHHHHHHHH-HGGG-----CEEEEECSSCS--------------------SCHHHHHHHHHHCSSCEEEC
T ss_pred EECC-CCCCHHHHHHHHHH-HHhc-----CCCeEECCCCh--------------------hhHHHHHHHHhhCCCCEEec
Confidence 6653 23444444433332 4544 45566666321 12566777777656654443
Q ss_pred -cCccHHHHHHHHHhcCCCCccccCCCCcc---cccHHHHHHHHHcCCeEEEecc
Q 035739 181 -SNFSRKKIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSP 231 (335)
Q Consensus 181 -s~~~~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~p 231 (335)
+-++.+.+.++++.... .++|+..+-+ ..-.++..+|+++|+.++..+.
T Consensus 276 E~~~~~~~~~~~i~~~~~--d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 328 (410)
T 2gl5_A 276 ERSYTRWGYRELLEKQSI--AVAQPDLCLCGGITEGKKICDYANIYDTTVQVHVC 328 (410)
T ss_dssp TTCCTTHHHHHHHHTTCC--SEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCC
T ss_pred CCcCCHHHHHHHHHcCCC--CEEecCccccCCHHHHHHHHHHHHHcCCeEeecCC
Confidence 34467888888886543 4666665543 2226789999999999887655
No 47
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=72.60 E-value=12 Score=32.90 Aligned_cols=101 Identities=15% Similarity=-0.013 Sum_probs=60.2
Q ss_pred hHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCccHHHHHHH
Q 035739 112 HVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSRKKIETI 191 (335)
Q Consensus 112 ~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~ 191 (335)
.-+..+-+.|.++|+++|.+-....+... | . ..+.++.+..+++...++...+. -+...++++
T Consensus 26 e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~-p-------------~--~~~~~e~~~~i~~~~~~~v~~l~-~n~~~i~~a 88 (295)
T 1ydn_A 26 ADKIALINRLSDCGYARIEATSFVSPKWV-P-------------Q--LADSREVMAGIRRADGVRYSVLV-PNMKGYEAA 88 (295)
T ss_dssp HHHHHHHHHHTTTTCSEEEEEECSCTTTC-G-------------G--GTTHHHHHHHSCCCSSSEEEEEC-SSHHHHHHH
T ss_pred HHHHHHHHHHHHcCcCEEEEccCcCcccc-c-------------c--ccCHHHHHHHHHhCCCCEEEEEe-CCHHHHHHH
Confidence 45566677788999998888644333110 0 0 12456666777665567766665 456778877
Q ss_pred HHhcCCCCccccCC--CCcc--------------cccHHHHHHHHHcCCeEEEeccC
Q 035739 192 LTFATIPPSINQVE--MHPV--------------WQQRKLIEFCKAKGIIVTAYSPL 232 (335)
Q Consensus 192 ~~~~~~~~~~~q~~--~~~~--------------~~~~~~l~~~~~~gi~v~a~~pl 232 (335)
++. +++ .+.+. .|.. .+-.+.+++|+++|+.|.++-..
T Consensus 89 ~~~-G~~--~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~ 142 (295)
T 1ydn_A 89 AAA-HAD--EIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSC 142 (295)
T ss_dssp HHT-TCS--EEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHC-CCC--EEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEE
Confidence 774 433 22222 2210 11156789999999999865443
No 48
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=72.40 E-value=32 Score=29.70 Aligned_cols=186 Identities=15% Similarity=0.097 Sum_probs=100.1
Q ss_pred CCCChHHHHHHHHHHHHcCCCEeeCCCCcC------CHHHHHHH---HHHHHHcCCCCCCCce--EEeeccCCCCCChhh
Q 035739 44 DKSDTDALKLVVLEAIKLGYRHFDTAAMYG------TEKALGEA---IAEALRLGLVSSREQL--FITSKLWCQNAHRDH 112 (335)
Q Consensus 44 ~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg------se~~lG~~---l~~~~~~g~~~~R~~~--~i~tK~~~~~~~~~~ 112 (335)
+..+.++..++++.|.+.|++.|=.++++. ....+-+. |++...+ ...++ +...-+. .. ..
T Consensus 15 G~~~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~----~~~~i~I~~G~Ev~---~~-~~ 86 (262)
T 3qy7_A 15 GAGDSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIK----EDIPLHVLPGQEIR---IY-GE 86 (262)
T ss_dssp SCSSHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHH----TTCCCEEECCCEEE---CC-TT
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHh----cCCCCEEecCeEEe---cc-hh
Confidence 344678888999999999999998888863 23333333 3332111 11122 2222222 22 23
Q ss_pred HHHHHHH-HHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecC------ccH
Q 035739 113 VIPALKK-SLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSN------FSR 185 (335)
Q Consensus 113 i~~~~e~-sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~------~~~ 185 (335)
+...+++ ++-.|+ --|.+++..|.... ...+.+.+..+.+.|.+--||=-. ...
T Consensus 87 ~~~~l~~~~~~~l~--~~~~vl~e~~~~~~-----------------~~~~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~ 147 (262)
T 3qy7_A 87 VEQDLAKRQLLSLN--DTKYILIEFPFDHV-----------------PRYAEQLFYDLQLKGYIPVIAHPERNREIRENP 147 (262)
T ss_dssp HHHHHHTTCSCCGG--GSSEEEEECCTTCC-----------------CTTHHHHHHHHHHTTCEEEEECGGGCHHHHHCT
T ss_pred HHHHHhcCCCcEEC--CceEEEEeCCCccC-----------------HHHHHHHHHHHHHCCCcEEEECCCccccccccH
Confidence 3333443 233332 12456666553221 235678888889999987777332 112
Q ss_pred HHHHHHHHhcCCCCccccCCCCcccc-----cHHHHHHHHHcCCeEEEeccCCCCCCcCCCCccCChHHHHHHHHHhCCC
Q 035739 186 KKIETILTFATIPPSINQVEMHPVWQ-----QRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEIAKARGKT 260 (335)
Q Consensus 186 ~~l~~~~~~~~~~~~~~q~~~~~~~~-----~~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~la~~~g~s 260 (335)
+.+.++.+. + ...|++.+.+.. .......|.++|+.++.-|-... .-. ....-.+.+..+.+++|..
T Consensus 148 ~~l~~l~~~-G---~~iEiN~~s~~g~~g~~~~~~~~~~~~~gl~~~igSDaH~--~~~--r~~~~~~a~~~l~~~~G~~ 219 (262)
T 3qy7_A 148 SLLYHLVEK-G---AASQITSGSLAGIFGKQLKAFSLRLVEANLIHFVASDAHN--VKT--RNFHTQEALYVLEKEFGSE 219 (262)
T ss_dssp HHHHHHHHT-T---CEEEEEHHHHHTTTCHHHHHHHHHHHHTTCCCEEECCBCS--SSS--SCCCHHHHHHHHHHHHCSH
T ss_pred HHHHHHHHC-C---CEEEEECCccCcccchHHHHHHHHHHhCCCeEEEEccCCC--CCC--CCchHHHHHHHHHHHhCHH
Confidence 345555443 3 256666555432 24567788889998887666543 110 1111234555555568876
Q ss_pred HHHH
Q 035739 261 VAQV 264 (335)
Q Consensus 261 ~~q~ 264 (335)
.++.
T Consensus 220 ~a~~ 223 (262)
T 3qy7_A 220 LPYM 223 (262)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
No 49
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=71.76 E-value=16 Score=32.80 Aligned_cols=101 Identities=14% Similarity=0.068 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHhCCCccceEEe-ecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEec-----CccHH
Q 035739 113 VIPALKKSLSALQMEYLDLYLV-HWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLS-----NFSRK 186 (335)
Q Consensus 113 i~~~~e~sL~~Lg~d~iDl~~l-H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs-----~~~~~ 186 (335)
+.+...+..+..|.|.||+-.- -+|... ....++..+.++.+++.-.+ -|.|- +++++
T Consensus 82 ~~~~A~~~v~~~GAdiIDIg~eStrP~~~---------------~vs~ee~~~~V~~v~~~~~v-PlsIDg~~~~T~~~e 145 (323)
T 4djd_D 82 PGRWAQKCVAEYGADLIYLKLDGADPEGA---------------NHSVDQCVATVKEVLQAVGV-PLVVVGCGDVEKDHE 145 (323)
T ss_dssp HHHHHHHHHHTTCCSEEEEECGGGCTTTT---------------CCCHHHHHHHHHHHHHHCCS-CEEEECCSCHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcCccCCCCCC---------------CCCHHHHHHHHHHHHhhCCc-eEEEECCCCCCCCHH
Confidence 4444444447889999998543 233221 34466777777777765332 37777 77889
Q ss_pred HHHHHHHhcC-CCCccccCCCCcccccHHHHHHHHHcCCeEEEeccC
Q 035739 187 KIETILTFAT-IPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSPL 232 (335)
Q Consensus 187 ~l~~~~~~~~-~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~pl 232 (335)
.++++++... ..+.++-+... +..++++.|+++|..++++.+.
T Consensus 146 V~eaAleagag~~~lINsv~~~---~~~~m~~laa~~g~~vVlmh~~ 189 (323)
T 4djd_D 146 VLEAVAEAAAGENLLLGNAEQE---NYKSLTAACMVHKHNIIARSPL 189 (323)
T ss_dssp HHHHHHHHTTTSCCEEEEEBTT---BCHHHHHHHHHHTCEEEEECSS
T ss_pred HHHHHHHhcCCCCCeEEECCcc---cHHHHHHHHHHhCCeEEEEccc
Confidence 9999999764 23455543332 2368999999999999998763
No 50
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=71.62 E-value=44 Score=30.35 Aligned_cols=150 Identities=13% Similarity=0.047 Sum_probs=87.1
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCC
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQM 126 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~ 126 (335)
+.++..+..+++.+.|++.|..--.- +-+..-+.++.. ++. --+++-|..+.. ..++.+...+ .++.|.
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~av-r~a---~g~d~~l~vDan-~~~~~~~a~~----~~~~l~- 213 (379)
T 2rdx_A 145 SEAETRAELARHRAAGYRQFQIKVGA-DWQSDIDRIRAC-LPL---LEPGEKAMADAN-QGWRVDNAIR----LARATR- 213 (379)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHH-GGG---SCTTCEEEEECT-TCSCHHHHHH----HHHHTT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccC-CHHHHHHHHHHH-HHh---cCCCCEEEEECC-CCCCHHHHHH----HHHHHH-
Confidence 45677778888999999998752111 222222333322 112 224566666753 2334433332 333442
Q ss_pred CccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEe-cCccHHHHHHHHHhcCCCCccccCC
Q 035739 127 EYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGL-SNFSRKKIETILTFATIPPSINQVE 205 (335)
Q Consensus 127 d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~~~q~~ 205 (335)
..++ ++..|. . -++.+.++++.-.|--++- +-++.+.++++++.... +++|+.
T Consensus 214 -~~~i-~iE~P~-------------------~---~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~--d~v~ik 267 (379)
T 2rdx_A 214 -DLDY-ILEQPC-------------------R---SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGA--EICCLK 267 (379)
T ss_dssp -TSCC-EEECCS-------------------S---SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCC--SEEEEE
T ss_pred -hCCe-EEeCCc-------------------C---CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCC--CEEEEe
Confidence 2344 555441 1 4677788887766665544 34568889999887654 356555
Q ss_pred CCcc---cccHHHHHHHHHcCCeEEEeccCC
Q 035739 206 MHPV---WQQRKLIEFCKAKGIIVTAYSPLG 233 (335)
Q Consensus 206 ~~~~---~~~~~~l~~~~~~gi~v~a~~pl~ 233 (335)
.+.+ ..-.++..+|+++|+.++..+.+.
T Consensus 268 ~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 298 (379)
T 2rdx_A 268 ISNLGGLSKARRTRDFLIDNRMPVVAEDSWG 298 (379)
T ss_dssp TTTTTSHHHHHHHHHHHHHTTCCEEEECSBC
T ss_pred ccccCCHHHHHHHHHHHHHcCCeEEEeeccC
Confidence 4443 223678999999999999885444
No 51
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=71.22 E-value=55 Score=29.83 Aligned_cols=150 Identities=17% Similarity=0.153 Sum_probs=87.1
Q ss_pred ChHHHHHHHHHHHHcCCCEeeC--CC----------CcC--CHHHHH------HHHHHHHHcCCCCCCCceEEeeccCCC
Q 035739 47 DTDALKLVVLEAIKLGYRHFDT--AA----------MYG--TEKALG------EAIAEALRLGLVSSREQLFITSKLWCQ 106 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~Dt--A~----------~Yg--se~~lG------~~l~~~~~~g~~~~R~~~~i~tK~~~~ 106 (335)
+.++..+..+++.+.|++.|.. +. .|| .+..+. +++++. --+++-|..... .
T Consensus 137 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a-------~G~d~~l~vD~n-~ 208 (392)
T 2poz_A 137 TPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDA-------AGPEIELMVDLS-G 208 (392)
T ss_dssp SHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHH-------HCTTSEEEEECT-T
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHh-------cCCCCEEEEECC-C
Confidence 6677778888889999998863 31 133 122221 233332 123566666653 2
Q ss_pred CCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecC-ccH
Q 035739 107 NAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSN-FSR 185 (335)
Q Consensus 107 ~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~-~~~ 185 (335)
.++.+...+-++. |+.+ ++.++..|... +-++.+.++++.-.|--++--+ ++.
T Consensus 209 ~~~~~~a~~~~~~-l~~~-----~i~~iE~P~~~--------------------~~~~~~~~l~~~~~ipIa~dE~~~~~ 262 (392)
T 2poz_A 209 GLTTDETIRFCRK-IGEL-----DICFVEEPCDP--------------------FDNGALKVISEQIPLPIAVGERVYTR 262 (392)
T ss_dssp CSCHHHHHHHHHH-HGGG-----CEEEEECCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCHH
T ss_pred CCCHHHHHHHHHH-HHhc-----CCCEEECCCCc--------------------ccHHHHHHHHhhCCCCEEecCCcCCH
Confidence 3444444333332 4444 45566666321 2256677777766666554443 457
Q ss_pred HHHHHHHHhcCCCCccccCCCCcc---cccHHHHHHHHHcCCeEEEeccC
Q 035739 186 KKIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPL 232 (335)
Q Consensus 186 ~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl 232 (335)
+.+.++++.... .++|+..+-+ ..-.++..+|+++|+.++.....
T Consensus 263 ~~~~~~i~~~~~--d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~~~ 310 (392)
T 2poz_A 263 FGFRKIFELQAC--GIIQPDIGTAGGLMETKKICAMAEAYNMRVAPHVCG 310 (392)
T ss_dssp HHHHHHHTTTCC--SEECCCTTTSSCHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred HHHHHHHHcCCC--CEEecCccccCCHHHHHHHHHHHHHcCCeEecCCCC
Confidence 788888875543 4666655443 22368899999999998876544
No 52
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=70.07 E-value=51 Score=29.75 Aligned_cols=152 Identities=14% Similarity=0.045 Sum_probs=89.3
Q ss_pred ChHHHHHHHHHHHH-cCCCEeeCCCCcCC-H--HHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIK-LGYRHFDTAAMYGT-E--KALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 122 (335)
Q Consensus 47 ~~~~~~~~l~~A~~-~Gin~~DtA~~Ygs-e--~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~ 122 (335)
+.++..+..+++.+ .|++.|..--.-++ + ..+=+++++.+ -+++-|..+.. ..++.+...+-+ +.|+
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~-------g~~~~l~vDan-~~~~~~~a~~~~-~~l~ 212 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAV-------GDRASVRVDVN-QGWDEQTASIWI-PRLE 212 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHH-------GGGCEEEEECT-TCCCHHHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhc-------CCCCEEEEECC-CCCCHHHHHHHH-HHHH
Confidence 45667777888889 99999875322222 1 12223445431 23455666653 234455544433 3577
Q ss_pred HhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEE-EecCccHHHHHHHHHhcCCCCcc
Q 035739 123 ALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSI-GLSNFSRKKIETILTFATIPPSI 201 (335)
Q Consensus 123 ~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~i-Gvs~~~~~~l~~~~~~~~~~~~~ 201 (335)
.+++++ +..|... +-++.+.++++.-.|.-. |=+-++.+.+.++++.... .+
T Consensus 213 ~~~i~~-----iEqP~~~--------------------~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~--d~ 265 (370)
T 1nu5_A 213 EAGVEL-----VEQPVPR--------------------ANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAV--DA 265 (370)
T ss_dssp HHTCCE-----EECCSCT--------------------TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCC--SE
T ss_pred hcCcce-----EeCCCCc--------------------ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCC--CE
Confidence 777654 4555221 235667777776555433 3345678889999886543 35
Q ss_pred ccCCCCcc---cccHHHHHHHHHcCCeEEEeccCCC
Q 035739 202 NQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 202 ~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
+|+..+.+ ..-.++..+|+++|+.++..+.+.+
T Consensus 266 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 301 (370)
T 1nu5_A 266 FSLKLCNMGGIANTLKVAAVAEAAGISSYGGTMLDS 301 (370)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred EEEchhhcCCHHHHHHHHHHHHHcCCcEEecCCcch
Confidence 55543332 2226788999999999998765543
No 53
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=69.99 E-value=66 Score=29.63 Aligned_cols=148 Identities=16% Similarity=0.111 Sum_probs=89.5
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcC------CH------HHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYG------TE------KALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVI 114 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg------se------~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~ 114 (335)
+.++..+.++.+++.|++.|-. ..-. .. ..+=+++|+. --+++-|..... ...+.+...
T Consensus 125 ~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~~~~~~~~~~d~e~v~avR~a-------vG~d~~L~vDaN-~~~~~~~A~ 195 (405)
T 3rr1_A 125 RPADVIAGMKALQAGGFDHFKL-NGCEEMGIIDTSRAVDAAVARVAEIRSA-------FGNTVEFGLDFH-GRVSAPMAK 195 (405)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEE-ESCCSSSCBCSHHHHHHHHHHHHHHHHT-------TGGGSEEEEECC-SCBCHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE-ecCCcccccccchhHHHHHHHHHHHHHH-------hCCCceEEEECC-CCCCHHHHH
Confidence 6778888889999999999986 1110 11 1122344542 235566666653 223333332
Q ss_pred HHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHH
Q 035739 115 PALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILT 193 (335)
Q Consensus 115 ~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~ 193 (335)
+ +-+.|+.+++++ +..|... +-++.+.++++.-.|. ..|=+-++..++.++++
T Consensus 196 ~-~~~~L~~~~i~~-----iEeP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~ 249 (405)
T 3rr1_A 196 V-LIKELEPYRPLF-----IEEPVLA--------------------EQAETYARLAAHTHLPIAAGERMFSRFDFKRVLE 249 (405)
T ss_dssp H-HHHHHGGGCCSC-----EECSSCC--------------------SSTHHHHHHHTTCSSCEEECTTCCSHHHHHHHHH
T ss_pred H-HHHHHHhcCCCE-----EECCCCc--------------------ccHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHH
Confidence 2 234556666544 5555321 1236677787776665 34456677889999988
Q ss_pred hcCCCCccccCCCCcc---cccHHHHHHHHHcCCeEEEecc
Q 035739 194 FATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSP 231 (335)
Q Consensus 194 ~~~~~~~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~p 231 (335)
.... .++|+...-+ ..-.++..+|+++|+.++..+.
T Consensus 250 ~~a~--d~v~~d~~~~GGitea~kia~lA~~~gi~v~~h~~ 288 (405)
T 3rr1_A 250 AGGV--SILQPDLSHAGGITECVKIAAMAEAYDVALAPHCP 288 (405)
T ss_dssp HCCC--SEECCBTTTTTHHHHHHHHHHHHHTTTCEECCBCC
T ss_pred HhCC--CeEEEChhhcCCHHHHHHHHHHHHHcCCEEEeCCC
Confidence 7654 4666665543 2236789999999999987643
No 54
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=69.98 E-value=67 Score=29.42 Aligned_cols=150 Identities=14% Similarity=0.081 Sum_probs=88.7
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCC------Cc------C---CHH------HHHHHHHHHHHcCCCCCCCceEEeeccCC
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAA------MY------G---TEK------ALGEAIAEALRLGLVSSREQLFITSKLWC 105 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~------~Y------g---se~------~lG~~l~~~~~~g~~~~R~~~~i~tK~~~ 105 (335)
+.++..+..+++.+.|++.|..=. .| + .+. .+=+++++. --+++-|.....
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a-------~G~d~~l~vDan- 223 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDA-------VGPDVDIIAEMH- 223 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHH-------HCTTSEEEEECT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHh-------cCCCCEEEEECC-
Confidence 567777888889999999987421 22 0 111 111233432 123566666653
Q ss_pred CCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEec-Ccc
Q 035739 106 QNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLS-NFS 184 (335)
Q Consensus 106 ~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs-~~~ 184 (335)
..++.+...+-++ .|+.+++++ +..|... +-++.+.++++.-.|--++-- -++
T Consensus 224 ~~~~~~~a~~~~~-~l~~~~i~~-----iE~P~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~~ 277 (407)
T 2o56_A 224 AFTDTTSAIQFGR-MIEELGIFY-----YEEPVMP--------------------LNPAQMKQVADKVNIPLAAGERIYW 277 (407)
T ss_dssp TCSCHHHHHHHHH-HHGGGCCSC-----EECSSCS--------------------SSHHHHHHHHHHCCSCEEECTTCCH
T ss_pred CCCCHHHHHHHHH-HHHhcCCCE-----EeCCCCh--------------------hhHHHHHHHHHhCCCCEEeCCCcCC
Confidence 2344555544444 367776654 4444221 225667777776566544443 346
Q ss_pred HHHHHHHHHhcCCCCccccCCCCcc---cccHHHHHHHHHcCCeEEEeccC
Q 035739 185 RKKIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPL 232 (335)
Q Consensus 185 ~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl 232 (335)
.+.+.++++.... .++|+..+-+ ..-.++..+|+++|+.++..+..
T Consensus 278 ~~~~~~~i~~~~~--d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 326 (407)
T 2o56_A 278 RWGYRPFLENGSL--SVIQPDICTCGGITEVKKICDMAHVYDKTVQIHVCG 326 (407)
T ss_dssp HHHHHHHHHTTCC--SEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred HHHHHHHHHcCCC--CEEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 7888888876543 4666665543 22267899999999998876554
No 55
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=69.94 E-value=62 Score=29.03 Aligned_cols=147 Identities=13% Similarity=0.074 Sum_probs=88.3
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCCHH---HHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGTEK---ALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 123 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~---~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~ 123 (335)
+.++..+..+++.+.|++.|..=-.-++-+ .+=+++++. --+++-|..+.. ..++.+...+-++. |+.
T Consensus 144 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a-------~g~~~~l~vDan-~~~~~~~a~~~~~~-l~~ 214 (359)
T 1mdl_A 144 GVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQA-------VGDDFGIMVDYN-QSLDVPAAIKRSQA-LQQ 214 (359)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHH-------HCSSSEEEEECT-TCSCHHHHHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHH-------hCCCCEEEEECC-CCCCHHHHHHHHHH-HHH
Confidence 456677777888899999987522111211 122344443 123566666653 23445555444443 777
Q ss_pred hCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEec-CccHHHHHHHHHhcCCCCccc
Q 035739 124 LQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLS-NFSRKKIETILTFATIPPSIN 202 (335)
Q Consensus 124 Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs-~~~~~~l~~~~~~~~~~~~~~ 202 (335)
++++++ ..|.. .+-++.+.++++.-.|--++-- -++.+.+.++++.... .++
T Consensus 215 ~~i~~i-----E~P~~--------------------~~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~--d~v 267 (359)
T 1mdl_A 215 EGVTWI-----EEPTL--------------------QHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGAC--RLA 267 (359)
T ss_dssp HTCSCE-----ECCSC--------------------TTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCC--SEE
T ss_pred hCCCeE-----ECCCC--------------------hhhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCC--CEE
Confidence 887654 44421 1236777788877666655543 4568888888886543 466
Q ss_pred cCCCCcc---cccHHHHHHHHHcCCeEEEe
Q 035739 203 QVEMHPV---WQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 203 q~~~~~~---~~~~~~l~~~~~~gi~v~a~ 229 (335)
|+..+-+ ..-.++..+|+++|+.++..
T Consensus 268 ~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~ 297 (359)
T 1mdl_A 268 MPDAMKIGGVTGWIRASALAQQFGIPMSSH 297 (359)
T ss_dssp CCBTTTTTHHHHHHHHHHHHHHTTCCBCCB
T ss_pred eecchhhCCHHHHHHHHHHHHHcCCeEeec
Confidence 6655543 22267889999999997765
No 56
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=69.78 E-value=63 Score=29.08 Aligned_cols=149 Identities=17% Similarity=0.188 Sum_probs=86.2
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcC-CHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhC
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYG-TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQ 125 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg-se~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg 125 (335)
+.++..+..+++.+.|++.|..=-.-. ..+.+ +++++.+ | +++-|..... ..++.+. .+-+ +.|+.++
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~e~v-~avr~~~--g-----~~~~l~vDan-~~~~~~~-~~~~-~~l~~~~ 209 (368)
T 1sjd_A 141 TIPQLLDVVGGYLDEGYVRIKLKIEPGWDVEPV-RAVRERF--G-----DDVLLQVDAN-TAYTLGD-APQL-ARLDPFG 209 (368)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECBTTBSHHHH-HHHHHHH--C-----TTSEEEEECT-TCCCGGG-HHHH-HTTGGGC
T ss_pred CHHHHHHHHHHHHHhCccEEEEecCchhHHHHH-HHHHHhc--C-----CCceEEEecc-CCCCHHH-HHHH-HHHHhcC
Confidence 566777788888899999876421101 23333 4555542 2 2344444432 2344555 3333 3366666
Q ss_pred CCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEE-EecCccHHHHHHHHHhcCCCCccccC
Q 035739 126 MEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSI-GLSNFSRKKIETILTFATIPPSINQV 204 (335)
Q Consensus 126 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~i-Gvs~~~~~~l~~~~~~~~~~~~~~q~ 204 (335)
++ ++..|... +-++.+.++++.-.|--. |=+-++.+.+.++++.... .++|+
T Consensus 210 i~-----~iE~P~~~--------------------~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~--d~v~i 262 (368)
T 1sjd_A 210 LL-----LIEQPLEE--------------------EDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAV--QIVNI 262 (368)
T ss_dssp CS-----EEECCSCT--------------------TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCC--SEEEE
T ss_pred CC-----eEeCCCCh--------------------hhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCC--CEEEe
Confidence 55 45555321 235677777776555433 3345678889998876543 46665
Q ss_pred CCCcc---cccHHHHHHHHHcCCeEEEeccCC
Q 035739 205 EMHPV---WQQRKLIEFCKAKGIIVTAYSPLG 233 (335)
Q Consensus 205 ~~~~~---~~~~~~l~~~~~~gi~v~a~~pl~ 233 (335)
..+.+ ..-.++..+|+++|+.++..+.+.
T Consensus 263 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 294 (368)
T 1sjd_A 263 KPGRVGGYLEARRVHDVCAAHGIPVWCGGMIE 294 (368)
T ss_dssp CTTTTTSHHHHHHHHHHHHHTTCCEEECCCCC
T ss_pred cccccCCHHHHHHHHHHHHHcCCcEEeCCccc
Confidence 54443 223678999999999976655444
No 57
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=69.74 E-value=55 Score=29.96 Aligned_cols=151 Identities=14% Similarity=0.083 Sum_probs=87.7
Q ss_pred CChHHHHHHHHHHHHcCCCEeeCCC----CcCC-----------HHH------HHHHHHHHHHcCCCCCCCceEEeeccC
Q 035739 46 SDTDALKLVVLEAIKLGYRHFDTAA----MYGT-----------EKA------LGEAIAEALRLGLVSSREQLFITSKLW 104 (335)
Q Consensus 46 ~~~~~~~~~l~~A~~~Gin~~DtA~----~Ygs-----------e~~------lG~~l~~~~~~g~~~~R~~~~i~tK~~ 104 (335)
.+.++..+...++.+.|++.|..=. .+|. +.. +=+++++. --+++-|.....
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~a-------vG~d~~l~vDan 217 (403)
T 2ox4_A 145 GRKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNA-------VGPDVDIIVENH 217 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHH-------HCTTSEEEEECT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHH-------hCCCCeEEEECC
Confidence 3667777888888999999987432 1221 111 11233432 123566666653
Q ss_pred CCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecC-c
Q 035739 105 CQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSN-F 183 (335)
Q Consensus 105 ~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~-~ 183 (335)
..++.+...+-++. |+.+ ++.++..|... +-++.+.++++.-.|--++--+ +
T Consensus 218 -~~~~~~~ai~~~~~-l~~~-----~i~~iE~P~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~ 270 (403)
T 2ox4_A 218 -GHTDLVSAIQFAKA-IEEF-----NIFFYEEINTP--------------------LNPRLLKEAKKKIDIPLASGERIY 270 (403)
T ss_dssp -TCSCHHHHHHHHHH-HGGG-----CEEEEECCSCT--------------------TSTHHHHHHHHTCCSCEEECTTCC
T ss_pred -CCCCHHHHHHHHHH-HHhh-----CCCEEeCCCCh--------------------hhHHHHHHHHHhCCCCEEecCCcC
Confidence 23444444433332 4544 45566666321 2256777788776666555444 4
Q ss_pred cHHHHHHHHHhcCCCCccccCCCCcc---cccHHHHHHHHHcCCeEEEeccC
Q 035739 184 SRKKIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPL 232 (335)
Q Consensus 184 ~~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl 232 (335)
+.+.+.++++.... .++|+..+-+ ..-.++..+|+++|+.++..+..
T Consensus 271 ~~~~~~~~i~~~~~--d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 320 (403)
T 2ox4_A 271 SRWGFLPFLEDRSI--DVIQPDLGTCGGFTEFKKIADMAHIFEVTVQAHVAG 320 (403)
T ss_dssp HHHHHHHHHHTTCC--SEECCCHHHHTHHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred CHHHHHHHHHcCCC--CEEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 57888888875543 4666554432 12267899999999998886553
No 58
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=68.95 E-value=69 Score=29.16 Aligned_cols=152 Identities=12% Similarity=0.113 Sum_probs=89.0
Q ss_pred ChHHHHHHHHHHHHc-CCCEeeCCCCc-CCHH--HHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKL-GYRHFDTAAMY-GTEK--ALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 122 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~-Gin~~DtA~~Y-gse~--~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~ 122 (335)
+.++..+-.+.+++. |++.|..=-.- ..+. ..=+++++. -.+++-|...... ..+.+... .+-+.|+
T Consensus 148 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a-------~g~~~~l~vDan~-~~~~~~A~-~~~~~l~ 218 (383)
T 3i4k_A 148 PLDVAVAEIEERIEEFGNRSFKLKMGAGDPAEDTRRVAELARE-------VGDRVSLRIDINA-RWDRRTAL-HYLPILA 218 (383)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCSSCHHHHHHHHHHHHHT-------TTTTSEEEEECTT-CSCHHHHH-HHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHH-------cCCCCEEEEECCC-CCCHHHHH-HHHHHHH
Confidence 556666777777887 99998643222 1122 222445542 2445666667632 33343332 2335666
Q ss_pred HhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCcc
Q 035739 123 ALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSI 201 (335)
Q Consensus 123 ~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~ 201 (335)
.+++++ +..|... +-++.+.++++.-.|. ..|=+-++..++.++++.... .+
T Consensus 219 ~~~i~~-----iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~ 271 (383)
T 3i4k_A 219 EAGVEL-----FEQPTPA--------------------DDLETLREITRRTNVSVMADESVWTPAEALAVVKAQAA--DV 271 (383)
T ss_dssp HTTCCE-----EESCSCT--------------------TCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCC--SE
T ss_pred hcCCCE-----EECCCCh--------------------hhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCC--CE
Confidence 676554 4555321 1245566666653443 445566778899999886654 46
Q ss_pred ccCCCCcc---cccHHHHHHHHHcCCeEEEeccCCC
Q 035739 202 NQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 202 ~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
+|+....+ ..-.++...|+++|+.++..+.+.+
T Consensus 272 v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 307 (383)
T 3i4k_A 272 IALKTTKHGGLLESKKIAAIAEAGGLACHGATSLEG 307 (383)
T ss_dssp EEECTTTTTSHHHHHHHHHHHHHTTCEEEECCSCCC
T ss_pred EEEcccccCCHHHHHHHHHHHHHcCCeEEeCCCCcc
Confidence 66655443 2236789999999999988766643
No 59
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=68.44 E-value=33 Score=31.64 Aligned_cols=148 Identities=16% Similarity=0.143 Sum_probs=88.8
Q ss_pred hHHHHHHHHHHHHcCCCEeeCCCCcC-CHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCC
Q 035739 48 TDALKLVVLEAIKLGYRHFDTAAMYG-TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQM 126 (335)
Q Consensus 48 ~~~~~~~l~~A~~~Gin~~DtA~~Yg-se~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~ 126 (335)
.++..+.++.+++.|++.|..=-.-. ..+. =+++++.+ | +++-|..... ...+.+. . .+-+.|+.+++
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv~~~~d~~~-v~avR~a~--G-----~~~~L~vDaN-~~w~~~~-~-~~~~~l~~~~i 232 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKIKPGWDVEP-LQETRRAV--G-----DHFPLWTDAN-SSFELDQ-W-ETFKAMDAAKC 232 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEECBTTBSHHH-HHHHHHHH--C-----TTSCEEEECT-TCCCGGG-H-HHHHHHGGGCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCcchHHHH-HHHHHHhc--C-----CCCEEEEeCC-CCCCHHH-H-HHHHHHHhcCC
Confidence 67788888889999999886422112 2222 24566642 2 3344444543 2344555 3 33456777665
Q ss_pred CccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCccccCC
Q 035739 127 EYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSINQVE 205 (335)
Q Consensus 127 d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~ 205 (335)
++ +..|... +-++.+.++++.-.|. ..|=+-++..++.++++.... .++|+.
T Consensus 233 ~~-----iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~--d~v~~k 285 (400)
T 3mwc_A 233 LF-----HEQPLHY--------------------EALLDLKELGERIETPICLDESLISSRVAEFVAKLGIS--NIWNIK 285 (400)
T ss_dssp SC-----EESCSCT--------------------TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCC--SEEEEC
T ss_pred CE-----EeCCCCh--------------------hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCC--CEEEEc
Confidence 55 4555321 1256677777765554 555667788889999886543 455554
Q ss_pred CCcc---cccHHHHHHHHHcCCeEEEeccCC
Q 035739 206 MHPV---WQQRKLIEFCKAKGIIVTAYSPLG 233 (335)
Q Consensus 206 ~~~~---~~~~~~l~~~~~~gi~v~a~~pl~ 233 (335)
...+ ..-.++..+|+++|+.++..+.+.
T Consensus 286 ~~~~GGit~~~~ia~~A~~~gi~~~~~~~~e 316 (400)
T 3mwc_A 286 IQRVGGLLEAIKIYKIATDNGIKLWGGTMPE 316 (400)
T ss_dssp HHHHTSHHHHHHHHHHHHHTTCEEEECCSCC
T ss_pred chhhCCHHHHHHHHHHHHHcCCEEEecCCCC
Confidence 4332 222678999999999998766554
No 60
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=67.72 E-value=47 Score=30.39 Aligned_cols=146 Identities=11% Similarity=0.051 Sum_probs=85.8
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCC----HHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGT----EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 122 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygs----e~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~ 122 (335)
+.++..+..+++.+.|++.|..--.-++ .+.+ +++++.+ | +++-|..... ..++.+...+-++. |+
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v-~avR~av--g-----~d~~l~vDan-~~~~~~~a~~~~~~-l~ 231 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQPDGALDIARV-TAVRKHL--G-----DAVPLMVDAN-QQWDRPTAQRMCRI-FE 231 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHH-HHHHHHH--C-----TTSCEEEECT-TCCCHHHHHHHHHH-HG
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHH-HHHHHHc--C-----CCCEEEEECC-CCCCHHHHHHHHHH-HH
Confidence 5677778888899999998875211112 2222 4555532 2 2344444542 23455555544433 77
Q ss_pred HhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEe-cCccHHHHHHHHHhcCCCCcc
Q 035739 123 ALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGL-SNFSRKKIETILTFATIPPSI 201 (335)
Q Consensus 123 ~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~~ 201 (335)
.++++++ ..|... +-++.+.++++.-.|--++- +-++.+.++++++.... .+
T Consensus 232 ~~~i~~i-----E~P~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~ 284 (393)
T 2og9_A 232 PFNLVWI-----EEPLDA--------------------YDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAA--DY 284 (393)
T ss_dssp GGCCSCE-----ECCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCC--SE
T ss_pred hhCCCEE-----ECCCCc--------------------ccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCC--CE
Confidence 7776654 444210 23566677777655654443 44568889998886543 46
Q ss_pred ccCCCCcc---cccHHHHHHHHHcCCeEEEe
Q 035739 202 NQVEMHPV---WQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 202 ~q~~~~~~---~~~~~~l~~~~~~gi~v~a~ 229 (335)
+|+..+-+ ..-.++..+|+++|+.++..
T Consensus 285 v~ik~~~~GGit~~~~i~~~A~~~gi~~~~h 315 (393)
T 2og9_A 285 LMPDAPRVGGITPFLKIASLAEHAGLMLAPH 315 (393)
T ss_dssp ECCCHHHHTSHHHHHHHHHHHHHTTCEECCC
T ss_pred EeeCccccCCHHHHHHHHHHHHHcCCEEecc
Confidence 65554332 22267899999999998743
No 61
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=67.14 E-value=75 Score=28.94 Aligned_cols=149 Identities=12% Similarity=0.089 Sum_probs=87.8
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCC-HH--HHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGT-EK--ALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 123 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygs-e~--~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~ 123 (335)
+.++..+..+++.+.|++.|..=....+ +. .+=+++++.+ -+++-|..+.. ..++.+...+-++. |+.
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~-------G~d~~l~vDan-~~~~~~~a~~~~~~-l~~ 219 (391)
T 2qgy_A 149 DTNDYLRQIEKFYGKKYGGIKIYPMLDSLSISIQFVEKVREIV-------GDELPLMLDLA-VPEDLDQTKSFLKE-VSS 219 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEECCCCSSHHHHHHHHHHHHHHH-------CSSSCEEEECC-CCSCHHHHHHHHHH-HGG
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCChHHHHHHHHHHHHHHh-------CCCCEEEEEcC-CCCCHHHHHHHHHH-HHh
Confidence 5677778888899999998874221111 11 1123344431 23455555653 23445554444433 667
Q ss_pred hCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEe-cCccHHHHHHHHHhcCCCCccc
Q 035739 124 LQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGL-SNFSRKKIETILTFATIPPSIN 202 (335)
Q Consensus 124 Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~~~ 202 (335)
+++++ +..|.. .+-++.+.++++.-.|--++- +-++.+.+.++++.... .++
T Consensus 220 ~~i~~-----iEqP~~--------------------~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~v 272 (391)
T 2qgy_A 220 FNPYW-----IEEPVD--------------------GENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAA--DIF 272 (391)
T ss_dssp GCCSE-----EECSSC--------------------TTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCC--SEE
T ss_pred cCCCe-----EeCCCC--------------------hhhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCC--CEE
Confidence 76654 444422 023566777777655654443 44568889999886543 466
Q ss_pred cCCCCcc---cccHHHHHHHHHcCCeEEEecc
Q 035739 203 QVEMHPV---WQQRKLIEFCKAKGIIVTAYSP 231 (335)
Q Consensus 203 q~~~~~~---~~~~~~l~~~~~~gi~v~a~~p 231 (335)
|+..+-+ ..-.++..+|+++|+.++..+.
T Consensus 273 ~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 273 NPDISGMGGLIDIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp CCBTTTSSCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred EECcchhCCHHHHHHHHHHHHHCCCEEeccCC
Confidence 6654443 2226789999999999887754
No 62
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=66.88 E-value=74 Score=28.76 Aligned_cols=152 Identities=11% Similarity=0.075 Sum_probs=89.7
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcC--CHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHh
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYG--TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSAL 124 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg--se~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~L 124 (335)
+.++..+..+.+++.|++.|-.=-... .+...=+++++. --+++-|..... ...+.+... .+-+.|+.+
T Consensus 140 ~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~d~~~v~avR~~-------~g~~~~l~vDaN-~~~~~~~A~-~~~~~l~~~ 210 (368)
T 3q45_A 140 EPHKMAADAVQIKKNGFEIIKVKVGGSKELDVERIRMIREA-------AGDSITLRIDAN-QGWSVETAI-ETLTLLEPY 210 (368)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHH-------HCSSSEEEEECT-TCBCHHHHH-HHHHHHGGG
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCHHHHHHHHHHHHHH-------hCCCCeEEEECC-CCCChHHHH-HHHHHHhhc
Confidence 567777788888999999986432222 122222455554 124455555542 233333332 233455566
Q ss_pred CCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCcccc
Q 035739 125 QMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSINQ 203 (335)
Q Consensus 125 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q 203 (335)
++++ +..|... +-++.+.++++.-.|. ..|=+-++..++.++++.... .++|
T Consensus 211 ~i~~-----iEqP~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~--d~v~ 263 (368)
T 3q45_A 211 NIQH-----CEEPVSR--------------------NLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQAC--DSFN 263 (368)
T ss_dssp CCSC-----EECCBCG--------------------GGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCC--SEEE
T ss_pred CCCE-----EECCCCh--------------------hHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCC--CeEE
Confidence 6554 4555321 2345667777765554 445566788899999886543 4666
Q ss_pred CCCCcc---cccHHHHHHHHHcCCeEEEeccCCC
Q 035739 204 VEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 204 ~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
+....+ ..-.++..+|+++|+.++..+.+.+
T Consensus 264 ~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 297 (368)
T 3q45_A 264 LKLSKSAGITNALNIIRLAEQAHMPVQVGGFLES 297 (368)
T ss_dssp ECTTTTTSHHHHHHHHHHHHHTTCCEEECCSSCC
T ss_pred echhhcCCHHHHHHHHHHHHHcCCcEEecCcccc
Confidence 655443 2236789999999999998665543
No 63
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=66.43 E-value=57 Score=29.39 Aligned_cols=151 Identities=17% Similarity=0.166 Sum_probs=84.9
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCCH--HHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHH-HHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGTE--KALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVI-PALKKSLSA 123 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygse--~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~-~~~e~sL~~ 123 (335)
+.++..+..+++.+.|++.|..--.-..+ ..+=+++++.+ -+++-|..+.. ..++.+... +-++ .|+.
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a~-------g~~~~l~vDan-~~~~~~~a~~~~~~-~l~~ 211 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVGTNVKEDVKRIEAVRERV-------GNDIAIRVDVN-QGWKNSANTLTALR-SLGH 211 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHHHHH-------CTTSEEEEECT-TTTBSHHHHHHHHH-TSTT
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeCCCHHHHHHHHHHHHHHh-------CCCCeEEEECC-CCCCHHHHHHHHHH-HHHh
Confidence 55667778888899999998752111111 11223445431 23455555553 223334333 2222 2444
Q ss_pred hCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEe-cCccHHHHHHHHHhcCCCCccc
Q 035739 124 LQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGL-SNFSRKKIETILTFATIPPSIN 202 (335)
Q Consensus 124 Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~~~ 202 (335)
++++ ++..|.. .+-++.+.++++.-.|--.+- +-++.+.+.++++.... .++
T Consensus 212 ~~i~-----~iEqP~~--------------------~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~--d~v 264 (369)
T 2p8b_A 212 LNID-----WIEQPVI--------------------ADDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAA--DKV 264 (369)
T ss_dssp SCCS-----CEECCBC--------------------TTCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCC--SEE
T ss_pred CCCc-----EEECCCC--------------------cccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCC--CEE
Confidence 4444 4555522 123567778887766654443 44568889998886554 355
Q ss_pred cCCCCcc---cccHHHHHHHHHcCCeEEEeccCC
Q 035739 203 QVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLG 233 (335)
Q Consensus 203 q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl~ 233 (335)
|+..+-+ ..-.++..+|+++|+.++..+.+.
T Consensus 265 ~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 298 (369)
T 2p8b_A 265 NIKLMKCGGIYPAVKLAHQAEMAGIECQVGSMVE 298 (369)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHTTCEEEECCSSC
T ss_pred EeecchhCCHHHHHHHHHHHHHcCCcEEecCCCc
Confidence 5543322 122678899999999998766543
No 64
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=66.14 E-value=37 Score=29.53 Aligned_cols=100 Identities=12% Similarity=-0.034 Sum_probs=67.2
Q ss_pred ChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCccHHHH
Q 035739 109 HRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSRKKI 188 (335)
Q Consensus 109 ~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l 188 (335)
+.+.+.+..++.. .-|-|.||+-.-... ....+.+...++.+++.-.+ -|.|-+++++.+
T Consensus 32 ~~~~a~~~a~~~v-~~GAdiIDIg~~s~~------------------~eE~~rv~~vi~~l~~~~~~-pisIDT~~~~v~ 91 (271)
T 2yci_X 32 DPRPIQEWARRQA-EKGAHYLDVNTGPTA------------------DDPVRVMEWLVKTIQEVVDL-PCCLDSTNPDAI 91 (271)
T ss_dssp CCHHHHHHHHHHH-HTTCSEEEEECCSCS------------------SCHHHHHHHHHHHHHHHCCC-CEEEECSCHHHH
T ss_pred CHHHHHHHHHHHH-HCCCCEEEEcCCcCc------------------hhHHHHHHHHHHHHHHhCCC-eEEEeCCCHHHH
Confidence 3455555555444 678888888664421 12266677777777765222 489999999999
Q ss_pred HHHHHhcCCCCccccCCCCccccc--HHHHHHHHHcCCeEEEecc
Q 035739 189 ETILTFATIPPSINQVEMHPVWQQ--RKLIEFCKAKGIIVTAYSP 231 (335)
Q Consensus 189 ~~~~~~~~~~~~~~q~~~~~~~~~--~~~l~~~~~~gi~v~a~~p 231 (335)
+++++.+.-...+|-+. ... + .++++.++++|..++.+..
T Consensus 92 ~aal~a~~Ga~iINdvs--~~~-d~~~~~~~~~a~~~~~vv~m~~ 133 (271)
T 2yci_X 92 EAGLKVHRGHAMINSTS--ADQ-WKMDIFFPMAKKYEAAIIGLTM 133 (271)
T ss_dssp HHHHHHCCSCCEEEEEC--SCH-HHHHHHHHHHHHHTCEEEEESC
T ss_pred HHHHHhCCCCCEEEECC--CCc-cccHHHHHHHHHcCCCEEEEec
Confidence 99999864334444333 222 3 6799999999999999865
No 65
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=65.87 E-value=70 Score=29.13 Aligned_cols=151 Identities=12% Similarity=0.077 Sum_probs=89.9
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCC---HHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGT---EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 123 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygs---e~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~ 123 (335)
+.++..+.++.+++.|++.|-.=-.... +...=+++++. - +++-|...... ..+.+...+ +-+.|+.
T Consensus 148 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a-------~-~~~~l~vDan~-~~~~~~A~~-~~~~L~~ 217 (385)
T 3i6e_A 148 DFDADIALMERLRADGVGLIKLKTGFRDHAFDIMRLELIARD-------F-PEFRVRVDYNQ-GLEIDEAVP-RVLDVAQ 217 (385)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEECSSSCHHHHHHHHHHHHHH-------C-TTSEEEEECTT-CCCGGGHHH-HHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHh-------C-CCCeEEEECCC-CCCHHHHHH-HHHHHHh
Confidence 4556666777888999999864322221 22223456664 4 56666666532 334444433 3345566
Q ss_pred hCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCccc
Q 035739 124 LQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSIN 202 (335)
Q Consensus 124 Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~ 202 (335)
+++++ +..|... +-++.+.++++.-.|. ..|=+-++..++.++++.... .++
T Consensus 218 ~~i~~-----iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~--d~v 270 (385)
T 3i6e_A 218 FQPDF-----IEQPVRA--------------------HHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGIC--DGV 270 (385)
T ss_dssp TCCSC-----EECCSCT--------------------TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCC--SEE
T ss_pred cCCCE-----EECCCCc--------------------ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCC--CEE
Confidence 66554 4455321 1256777787765554 555667788899998886654 355
Q ss_pred cCCCCcc---cccHHHHHHHHHcCCeEEEeccCCC
Q 035739 203 QVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 203 q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
|+...-+ ..-.++..+|+++|+.++..+.+.+
T Consensus 271 ~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 305 (385)
T 3i6e_A 271 SIKIMKSGGLTRAQTVARIAAAHGLMAYGGDMFEA 305 (385)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHTTCEEEECCCSCC
T ss_pred EecccccCCHHHHHHHHHHHHHcCCEEEeCCCCcc
Confidence 5543322 2226789999999999977555543
No 66
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=65.20 E-value=82 Score=28.70 Aligned_cols=148 Identities=10% Similarity=0.049 Sum_probs=89.0
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCCHH--HHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHh
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGTEK--ALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSAL 124 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~--~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~L 124 (335)
+.++..+..+.+.+.|++.|..=-.-..+. .+=+++++.+ -+++-|..+... ..+.+...+ +-+.|+.+
T Consensus 151 ~~e~~~~~a~~~~~~G~~~iKiKvG~~~~~d~~~v~avR~a~-------g~d~~l~vDan~-~~~~~~A~~-~~~~l~~~ 221 (389)
T 3ozy_A 151 TPDQAADELAGWVEQGFTAAKLKVGRAPRKDAANLRAMRQRV-------GADVEILVDANQ-SLGRHDALA-MLRILDEA 221 (389)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH-------CTTSEEEEECTT-CCCHHHHHH-HHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEeeccCCCHHHHHHHHHHHHHHc-------CCCceEEEECCC-CcCHHHHHH-HHHHHHhc
Confidence 677888888999999999998532212111 1224555531 244566666532 334443332 33456666
Q ss_pred CCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HcCCcc-EEEecCccHHHHHHHHHhcCCCCccc
Q 035739 125 QMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQ-MLGLTK-SIGLSNFSRKKIETILTFATIPPSIN 202 (335)
Q Consensus 125 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~-~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~ 202 (335)
++++ +..|... +-++.+.+++ +.-.|. ..|=+-++..++.++++.... .++
T Consensus 222 ~i~~-----iEqP~~~--------------------~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~--d~v 274 (389)
T 3ozy_A 222 GCYW-----FEEPLSI--------------------DDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAI--DVL 274 (389)
T ss_dssp TCSE-----EESCSCT--------------------TCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCC--SEE
T ss_pred CCCE-----EECCCCc--------------------ccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCC--CEE
Confidence 6554 4555321 1256677787 665554 334455667888888886543 466
Q ss_pred cCCCCccc---ccHHHHHHHHHcCCeEEEec
Q 035739 203 QVEMHPVW---QQRKLIEFCKAKGIIVTAYS 230 (335)
Q Consensus 203 q~~~~~~~---~~~~~l~~~~~~gi~v~a~~ 230 (335)
|+....+- .-.++..+|+++|+.++..+
T Consensus 275 ~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~ 305 (389)
T 3ozy_A 275 QADASRAGGITEALAISASAASAHLAWNPHT 305 (389)
T ss_dssp CCCTTTSSCHHHHHHHHHHHHHTTCEECCCC
T ss_pred EeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 66655432 23678999999999988763
No 67
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=64.84 E-value=34 Score=30.82 Aligned_cols=105 Identities=10% Similarity=-0.008 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHhCCCccceEEee-cCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHc-CCccEEEec---CccHHH
Q 035739 113 VIPALKKSLSALQMEYLDLYLVH-WPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQML-GLTKSIGLS---NFSRKK 187 (335)
Q Consensus 113 i~~~~e~sL~~Lg~d~iDl~~lH-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~-Gkir~iGvs---~~~~~~ 187 (335)
-+..+-+.|.++|+++|.+=... ||... +. +.. .....|+.++++++. ..++...+. .-....
T Consensus 31 ~k~~i~~~L~~~Gvd~IEvG~~~g~p~ss-p~----------~g~-~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~ 98 (345)
T 1nvm_A 31 DVRAIARALDKAKVDSIEVAHGDGLQGSS-FN----------YGF-GRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHD 98 (345)
T ss_dssp HHHHHHHHHHHHTCSEEECSCTTSTTCCB-TT----------TBC-CSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCCC-Cc----------ccC-CCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHH
Confidence 34455566778998888873111 22110 00 000 011245666666654 345555552 223566
Q ss_pred HHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEec
Q 035739 188 IETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYS 230 (335)
Q Consensus 188 l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~ 230 (335)
++++.+. +++...+-++.+-...-.+.+++|+++|+.+..+-
T Consensus 99 i~~a~~a-Gvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~ 140 (345)
T 1nvm_A 99 LKNAYQA-GARVVRVATHCTEADVSKQHIEYARNLGMDTVGFL 140 (345)
T ss_dssp HHHHHHH-TCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHhC-CcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEEE
Confidence 7777764 44433333344444444789999999999887663
No 68
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=64.81 E-value=85 Score=28.74 Aligned_cols=150 Identities=11% Similarity=0.124 Sum_probs=86.6
Q ss_pred ChHHHHHHHHHHHHcCCCEeeC--CCCcCC-----------HH------HHHHHHHHHHHcCCCCCCCceEEeeccCCCC
Q 035739 47 DTDALKLVVLEAIKLGYRHFDT--AAMYGT-----------EK------ALGEAIAEALRLGLVSSREQLFITSKLWCQN 107 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~Dt--A~~Ygs-----------e~------~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~ 107 (335)
+.++..+...++.+.|++.|.. ++.||. +. .+=+++++. --+++-|..... ..
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea-------~G~d~~l~vDan-~~ 220 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREA-------VGPEVEVAIDMH-GR 220 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHH-------HCSSSEEEEECT-TC
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHHHHHHHh-------cCCCCEEEEECC-CC
Confidence 4566777778888999998763 222332 11 111334442 123566666653 23
Q ss_pred CChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEe-cCccHH
Q 035739 108 AHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGL-SNFSRK 186 (335)
Q Consensus 108 ~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGv-s~~~~~ 186 (335)
++.+...+-++ .|+.++++ ++..|... +-++.+.++++.-.|--.+- +-++.+
T Consensus 221 ~~~~~a~~~~~-~l~~~~i~-----~iEeP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~ 274 (410)
T 2qq6_A 221 FDIPSSIRFAR-AMEPFGLL-----WLEEPTPP--------------------ENLDALAEVRRSTSTPICAGENVYTRF 274 (410)
T ss_dssp CCHHHHHHHHH-HHGGGCCS-----EEECCSCT--------------------TCHHHHHHHHTTCSSCEEECTTCCSHH
T ss_pred CCHHHHHHHHH-HHhhcCCC-----eEECCCCh--------------------hhHHHHHHHHhhCCCCEEeCCCcCCHH
Confidence 44555444443 36666654 45555321 23567777777655654443 445688
Q ss_pred HHHHHHHhcCCCCccccCCCCcc---cccHHHHHHHHHcCCeEEEeccC
Q 035739 187 KIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPL 232 (335)
Q Consensus 187 ~l~~~~~~~~~~~~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl 232 (335)
.+.++++.... .++|+..+-+ ..-.++..+|+++|+.++.....
T Consensus 275 ~~~~~i~~~~~--d~v~ik~~~~GGite~~~ia~~A~~~g~~~~~h~~~ 321 (410)
T 2qq6_A 275 DFRELFAKRAV--DYVMPDVAKCGGLAEAKRIANLAELDYIPFAPHNVS 321 (410)
T ss_dssp HHHHHHHTTCC--SEECCBHHHHTHHHHHHHHHHHHHTTTCCBCCBCCS
T ss_pred HHHHHHHcCCC--CEEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 89999886543 4666554332 12267889999999998876553
No 69
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=64.42 E-value=60 Score=29.68 Aligned_cols=151 Identities=10% Similarity=0.130 Sum_probs=88.3
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcC---CHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 123 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg---se~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~ 123 (335)
+.++..+..+++.+.|++.|..--.-. ..+.+ +++++.+ | +++-|..... ..++.+...+-+ +.|+.
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v-~avR~a~--g-----~d~~l~vDan-~~~~~~~a~~~~-~~l~~ 214 (397)
T 2qde_A 145 EPEAVAEEALAVLREGFHFVKLKAGGPLKADIAMV-AEVRRAV--G-----DDVDLFIDIN-GAWTYDQALTTI-RALEK 214 (397)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEEECCSCHHHHHHHH-HHHHHHH--C-----TTSCEEEECT-TCCCHHHHHHHH-HHHGG
T ss_pred CHHHHHHHHHHHHHhhhhheeecccCCHHHHHHHH-HHHHHhh--C-----CCCEEEEECC-CCCCHHHHHHHH-HHHHh
Confidence 567777788888899999886421111 12222 4455532 2 2444555542 234455544433 35666
Q ss_pred hCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEE-ecCccHHHHHHHHHhcCCCCccc
Q 035739 124 LQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIG-LSNFSRKKIETILTFATIPPSIN 202 (335)
Q Consensus 124 Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iG-vs~~~~~~l~~~~~~~~~~~~~~ 202 (335)
+++++ +..|... +-++.+.++++.-.|--.+ =+-++...+.++++.... .++
T Consensus 215 ~~i~~-----iEqP~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~v 267 (397)
T 2qde_A 215 YNLSK-----IEQPLPA--------------------WDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAA--DGL 267 (397)
T ss_dssp GCCSC-----EECCSCT--------------------TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCC--SEE
T ss_pred CCCCE-----EECCCCh--------------------hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCC--CEE
Confidence 66654 4555221 2356777777765555443 344568889998886554 355
Q ss_pred cCCCCcc---cccHHHHHHHHHcCCeEEEeccCCC
Q 035739 203 QVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 203 q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
|+..+-+ ..-.++...|+++|+.++..+.+.+
T Consensus 268 ~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 302 (397)
T 2qde_A 268 MIKTQKAGGLLKAQRWLTLARLANLPVICGCMVGS 302 (397)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHHTCCEEECCCSCC
T ss_pred EEeccccCCHHHHHHHHHHHHHcCCeEEEecCccc
Confidence 5543332 2226789999999999998865543
No 70
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=63.42 E-value=83 Score=28.74 Aligned_cols=147 Identities=13% Similarity=0.083 Sum_probs=86.2
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCC-CCcC--CHHHHH---HHHHHHHHcCCCCCCCceEEeeccCCCCC--ChhhHHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTA-AMYG--TEKALG---EAIAEALRLGLVSSREQLFITSKLWCQNA--HRDHVIPALK 118 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA-~~Yg--se~~lG---~~l~~~~~~g~~~~R~~~~i~tK~~~~~~--~~~~i~~~~e 118 (335)
+.++..+...++.+.|++.|..= ...| -++..- +++++. --+++-|..+... .+ +.+...+-++
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~spvG~~~~~~~~e~v~avr~a-------~G~d~~l~vDan~-~~~~~~~~a~~~~~ 216 (401)
T 2hzg_A 145 TPQETLERARAARRDGFAAVKFGWGPIGRGTVAADADQIMAAREG-------LGPDGDLMVDVGQ-IFGEDVEAAAARLP 216 (401)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEESTTTTSSCHHHHHHHHHHHHHH-------HCSSSEEEEECTT-TTTTCHHHHHTTHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEcCCCCCCCHHHHHHHHHHHHHHH-------hCCCCeEEEECCC-CCCCCHHHHHHHHH
Confidence 56777788888899999998742 0023 212222 233432 1235666666632 33 4555444443
Q ss_pred HHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-cCCccEEEe-cCccHHHHHHHHHhcC
Q 035739 119 KSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQM-LGLTKSIGL-SNFSRKKIETILTFAT 196 (335)
Q Consensus 119 ~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~-~Gkir~iGv-s~~~~~~l~~~~~~~~ 196 (335)
. |+.+++++ +..|.. .+-|+.+.++++ .-.|--++- +-++.+.+.++++...
T Consensus 217 ~-l~~~~i~~-----iEqP~~--------------------~~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~ 270 (401)
T 2hzg_A 217 T-LDAAGVLW-----LEEPFD--------------------AGALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGR 270 (401)
T ss_dssp H-HHHTTCSE-----EECCSC--------------------TTCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSC
T ss_pred H-HHhcCCCE-----EECCCC--------------------ccCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCC
Confidence 3 67777654 455421 123677778887 555654443 3446788999988665
Q ss_pred CCCccccCCCCcc---cccHHHHHHHHHcCCeEEEe
Q 035739 197 IPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 197 ~~~~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~ 229 (335)
. .++|+..+.+ ..-.++..+|+++|+.++..
T Consensus 271 ~--d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 271 I--GFIQIDCGRIGGLGPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp C--SEEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC
T ss_pred C--CEEEeCcchhCCHHHHHHHHHHHHHcCCEEecC
Confidence 4 3555543332 22267899999999998865
No 71
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=63.16 E-value=65 Score=29.50 Aligned_cols=146 Identities=15% Similarity=0.085 Sum_probs=85.5
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCC----HHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGT----EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 122 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygs----e~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~ 122 (335)
+.++..+...++.+.|++.|..--.-+. .+.+ +++++.+ | +++-|..+.. ..++.+...+-++. |+
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v-~avR~av--G-----~d~~l~vDan-~~~~~~~ai~~~~~-l~ 244 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKVGQPNCAEDIRRL-TAVREAL--G-----DEFPLMVDAN-QQWDRETAIRMGRK-ME 244 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHH-HHHHHHH--C-----SSSCEEEECT-TCSCHHHHHHHHHH-HG
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCCCCHHHHHHHH-HHHHHHc--C-----CCCeEEEECC-CCCCHHHHHHHHHH-HH
Confidence 5677778888889999998875211112 2222 4555532 2 3444555543 23445555444443 67
Q ss_pred HhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEE-ecCccHHHHHHHHHhcCCCCcc
Q 035739 123 ALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIG-LSNFSRKKIETILTFATIPPSI 201 (335)
Q Consensus 123 ~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iG-vs~~~~~~l~~~~~~~~~~~~~ 201 (335)
.+++++ +..|... +-++.+.++++.-.|--++ =+-++.+.+.++++.... .+
T Consensus 245 ~~~i~~-----iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~ 297 (398)
T 2pp0_A 245 QFNLIW-----IEEPLDA--------------------YDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNAS--DF 297 (398)
T ss_dssp GGTCSC-----EECCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCC--SE
T ss_pred HcCCce-----eeCCCCh--------------------hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCC--CE
Confidence 776654 4555221 2256677777765565444 344568889998886543 45
Q ss_pred ccCCCCcc---cccHHHHHHHHHcCCeEEEe
Q 035739 202 NQVEMHPV---WQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 202 ~q~~~~~~---~~~~~~l~~~~~~gi~v~a~ 229 (335)
+|+..+-+ ..-.++..+|+++|+.++..
T Consensus 298 v~ik~~~~GGite~~~i~~~A~~~gi~~~~h 328 (398)
T 2pp0_A 298 VQPDAPRVGGISPFLKIMDLAAKHGRKLAPH 328 (398)
T ss_dssp ECCCHHHHTSHHHHHHHHHHHHHTTCEECCC
T ss_pred EEeCccccCCHHHHHHHHHHHHHcCCeEeec
Confidence 65554332 22267899999999998743
No 72
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=62.13 E-value=42 Score=30.32 Aligned_cols=148 Identities=16% Similarity=0.140 Sum_probs=85.2
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcC-CHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhC
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYG-TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQ 125 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg-se~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg 125 (335)
+.++..+..+++.+.|++.|..=-.-. ..+.+ +++++. - +++-|..... ..++.+. .+ +-+.|+.++
T Consensus 141 ~~~~~~~~a~~~~~~G~~~iKik~~~~~d~~~v-~avr~a-------~-~~~~l~vDan-~~~~~~~-~~-~~~~l~~~~ 208 (369)
T 2zc8_A 141 SVEDTLRVVERHLEEGYRRIKLKIKPGWDYEVL-KAVREA-------F-PEATLTADAN-SAYSLAN-LA-QLKRLDELR 208 (369)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEECBTTBSHHHH-HHHHHH-------C-TTSCEEEECT-TCCCGGG-HH-HHHGGGGGC
T ss_pred CHHHHHHHHHHHHHhhhheeeeecChhHHHHHH-HHHHHH-------c-CCCeEEEecC-CCCCHHH-HH-HHHHHHhCC
Confidence 556677778888899999876421111 23333 566765 3 3444444442 2344555 33 333466665
Q ss_pred CCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCccccC
Q 035739 126 MEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSINQV 204 (335)
Q Consensus 126 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~ 204 (335)
+++ +..|... +-++.+.+++++-.|. ..|=+-++..++.++++.... .++|+
T Consensus 209 i~~-----iEqP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~--d~v~i 261 (369)
T 2zc8_A 209 LDY-----IEQPLAY--------------------DDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAG--RVFNV 261 (369)
T ss_dssp CSC-----EECCSCT--------------------TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCC--SEEEE
T ss_pred CcE-----EECCCCc--------------------ccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCC--CEEEE
Confidence 544 5555321 1235566666654554 344455678899999886544 35555
Q ss_pred CCCcc---cccHHHHHHHHHcCCeEEEeccCC
Q 035739 205 EMHPV---WQQRKLIEFCKAKGIIVTAYSPLG 233 (335)
Q Consensus 205 ~~~~~---~~~~~~l~~~~~~gi~v~a~~pl~ 233 (335)
..+-+ ..-.++..+|+++|+.++....+.
T Consensus 262 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 293 (369)
T 2zc8_A 262 KPARLGGHGESLRVHALAESAGIPLWMGGMLE 293 (369)
T ss_dssp CHHHHTSHHHHHHHHHHHHHTTCCEEECCCCC
T ss_pred chhhhCCHHHHHHHHHHHHHcCCcEEecCccc
Confidence 43322 122678999999999976655443
No 73
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=61.98 E-value=21 Score=31.71 Aligned_cols=152 Identities=14% Similarity=0.095 Sum_probs=81.2
Q ss_pred hhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCccHHHHHH
Q 035739 111 DHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSRKKIET 190 (335)
Q Consensus 111 ~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~ 190 (335)
..-+..+-+.|.++|+++|.+-..-.|... | . ..+.++.+..+.+...++..++. -+...++.
T Consensus 27 ~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~-p-------------~--~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~ 89 (307)
T 1ydo_A 27 TEDKITWINQLSRTGLSYIEITSFVHPKWI-P-------------A--LRDAIDVAKGIDREKGVTYAALV-PNQRGLEN 89 (307)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEEECSCTTTC-G-------------G--GTTHHHHHHHSCCCTTCEEEEEC-CSHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcCcccc-c-------------c--cCCHHHHHHHhhhcCCCeEEEEe-CCHHhHHH
Confidence 345666777889999999999865444211 0 0 11223344455444566666666 35677888
Q ss_pred HHHhcCCCCccccCCCCccc-------c-------cHHHHHHHHHcCCeEEEeccCCCCCCcCCCCccCChHHHHHHHHH
Q 035739 191 ILTFATIPPSINQVEMHPVW-------Q-------QRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEIAKA 256 (335)
Q Consensus 191 ~~~~~~~~~~~~q~~~~~~~-------~-------~~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~la~~ 256 (335)
+++. +++..-+-...|..+ . -.+.+++++++|+.+.++-...- |.-+ ......+.+.++++.
T Consensus 90 a~~~-g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~-~~~~--~~~~~~~~~~~~~~~ 165 (307)
T 1ydo_A 90 ALEG-GINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVF-GCPY--EKDVPIEQVIRLSEA 165 (307)
T ss_dssp HHHH-TCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTT-CBTT--TBCCCHHHHHHHHHH
T ss_pred HHhC-CcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEe-cCCc--CCCCCHHHHHHHHHH
Confidence 8775 333211112222111 1 15678999999999876543321 2110 111233444444432
Q ss_pred hCCCHHHHHHHHHhhcC--CEEE---eCCCCHHHHHHhhccccc
Q 035739 257 RGKTVAQVSLRWIVEQG--ATVV---IKSLNLERMKQNLGIFDW 295 (335)
Q Consensus 257 ~g~s~~q~al~~~l~~~--~~vi---~g~~~~~~l~enl~a~~~ 295 (335)
. ..-| ...| +|..+|.++.+.++.+..
T Consensus 166 ~------------~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~ 197 (307)
T 1ydo_A 166 L------------FEFGISELSLGDTIGAANPAQVETVLEALLA 197 (307)
T ss_dssp H------------HHHTCSCEEEECSSCCCCHHHHHHHHHHHHT
T ss_pred H------------HhcCCCEEEEcCCCCCcCHHHHHHHHHHHHH
Confidence 1 1123 2333 577899998888876543
No 74
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=61.08 E-value=1e+02 Score=28.50 Aligned_cols=144 Identities=13% Similarity=0.130 Sum_probs=83.1
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCC----HHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGT----EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 122 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygs----e~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~ 122 (335)
+.++..+...++.+.|++.|..--. ++ .+.+ +++++.+ -+++-|..... ..++.+...+-++. |+
T Consensus 198 ~~e~~~~~a~~~~~~Gf~~vKik~g-~~~~~d~e~v-~avR~a~-------G~d~~l~vDan-~~~~~~~a~~~~~~-l~ 266 (441)
T 2hxt_A 198 SDEKLVRLAKEAVADGFRTIKLKVG-ANVQDDIRRC-RLARAAI-------GPDIAMAVDAN-QRWDVGPAIDWMRQ-LA 266 (441)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECC-SCHHHHHHHH-HHHHHHH-------CSSSEEEEECT-TCCCHHHHHHHHHT-TG
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccC-CCHHHHHHHH-HHHHHhc-------CCCCeEEEECC-CCCCHHHHHHHHHH-HH
Confidence 5677778888899999998874211 12 1222 4455531 23455554542 23444444433333 55
Q ss_pred HhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHc-CCcc-EEEecCccHHHHHHHHHhcCCCCc
Q 035739 123 ALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQML-GLTK-SIGLSNFSRKKIETILTFATIPPS 200 (335)
Q Consensus 123 ~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~-Gkir-~iGvs~~~~~~l~~~~~~~~~~~~ 200 (335)
.++++ ++..|... +-++.+.++++. +.|- ..|=+.++...+.++++.... .
T Consensus 267 ~~~i~-----~iEqP~~~--------------------~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d 319 (441)
T 2hxt_A 267 EFDIA-----WIEEPTSP--------------------DDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAV--D 319 (441)
T ss_dssp GGCCS-----CEECCSCT--------------------TCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCC--S
T ss_pred hcCCC-----eeeCCCCH--------------------HHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCC--C
Confidence 55554 45555321 124556666665 2333 445566778899999887654 4
Q ss_pred cccCCCCcc---cccHHHHHHHHHcCCeEEE
Q 035739 201 INQVEMHPV---WQQRKLIEFCKAKGIIVTA 228 (335)
Q Consensus 201 ~~q~~~~~~---~~~~~~l~~~~~~gi~v~a 228 (335)
++|+..+-+ ..-.++..+|+++|+.++.
T Consensus 320 ~v~ik~~~~GGite~~~ia~~A~~~g~~~~~ 350 (441)
T 2hxt_A 320 LIQIDAARVGGVNENLAILLLAAKFGVRVFP 350 (441)
T ss_dssp EECCCTTTSSHHHHHHHHHHHHHHTTCEECC
T ss_pred EEEeCcceeCCHHHHHHHHHHHHHcCCeEEE
Confidence 666655543 2226789999999999853
No 75
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=60.87 E-value=42 Score=30.59 Aligned_cols=151 Identities=9% Similarity=0.100 Sum_probs=88.3
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCC
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQM 126 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~ 126 (335)
+.++..+..+.+.+.|++.|+.=-.-..+..+ +.++.. ++. --+++-|..+... ..+.+...+ +-+.|+.+
T Consensus 145 ~~e~~~~~a~~~~~~G~~~iKiK~G~~~~~d~-~~v~av-R~a---~g~~~~l~vDan~-~~~~~~a~~-~~~~l~~~-- 215 (378)
T 3eez_A 145 SVEETRAVIDRYRQRGYVAHSVKIGGDVERDI-ARIRDV-EDI---REPGEIVLYDVNR-GWTRQQALR-VMRATEDL-- 215 (378)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCHHHHH-HHHHHH-TTS---CCTTCEEEEECTT-CCCHHHHHH-HHHHTGGG--
T ss_pred CHHHHHHHHHHHHhCCCCEEEeccCCCHHHHH-HHHHHH-HHH---cCCCceEEEECCC-CCCHHHHHH-HHHHhccC--
Confidence 66778888888999999999853222212211 223321 112 1245677777642 333333222 22233443
Q ss_pred CccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCccccCC
Q 035739 127 EYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSINQVE 205 (335)
Q Consensus 127 d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~ 205 (335)
++ ++..|.. .++.+.++++.-.|. ..|=+-++..++.++++.... +++|+.
T Consensus 216 ---~i-~iEqP~~----------------------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~--d~v~ik 267 (378)
T 3eez_A 216 ---HV-MFEQPGE----------------------TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLA--EVFGIK 267 (378)
T ss_dssp ---TC-CEECCSS----------------------SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCC--SEEEEE
T ss_pred ---Ce-EEecCCC----------------------CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCC--CEEEeC
Confidence 45 5665521 256677777776665 344566778899999886543 455554
Q ss_pred CCcc---cccHHHHHHHHHcCCeEEEeccCCC
Q 035739 206 MHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 206 ~~~~---~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
..-+ ..-.++..+|+++|+.++..+.+.+
T Consensus 268 ~~~~GGit~~~~ia~~A~~~g~~~~~~~~~es 299 (378)
T 3eez_A 268 LNRVGGLTRAARMRDIALTHGIDMFVMATGGS 299 (378)
T ss_dssp HHHHTSHHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred chhcCCHHHHHHHHHHHHHcCCEEEcCCCCCC
Confidence 3322 2226789999999999998776654
No 76
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=60.53 E-value=78 Score=28.43 Aligned_cols=153 Identities=12% Similarity=0.118 Sum_probs=88.1
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCCHH---HHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGTEK---ALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 123 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~---~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~ 123 (335)
+.++..+..+++.+.|++.|..=-.-++-+ ..=+++++.+ -+++-|..+.. ..++.+...+-++. |+.
T Consensus 140 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a~-------g~~~~l~vDan-~~~~~~~a~~~~~~-l~~ 210 (366)
T 1tkk_A 140 SPEEMAADAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRV-------GSAVKLRLDAN-QGWRPKEAVTAIRK-MED 210 (366)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHHH-------CSSSEEEEECT-TCSCHHHHHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHHh-------CCCCeEEEECC-CCCCHHHHHHHHHH-Hhh
Confidence 556677778888899999987522111211 1123444431 23556666653 23444444444332 555
Q ss_pred hCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccE-EEecCccHHHHHHHHHhcCCCCccc
Q 035739 124 LQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKS-IGLSNFSRKKIETILTFATIPPSIN 202 (335)
Q Consensus 124 Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~-iGvs~~~~~~l~~~~~~~~~~~~~~ 202 (335)
.+ .++.++..|... +-++.+.++++.-.|-- .|=+-++...+.++++.... .++
T Consensus 211 ~~---~~i~~iEqP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~--d~v 265 (366)
T 1tkk_A 211 AG---LGIELVEQPVHK--------------------DDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSA--DLI 265 (366)
T ss_dssp TT---CCEEEEECCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCC--SEE
T ss_pred cC---CCceEEECCCCc--------------------ccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCC--CEE
Confidence 11 245566666321 23566777776655543 34455678889998886553 355
Q ss_pred cCCCCcc---cccHHHHHHHHHcCCeEEEeccCC
Q 035739 203 QVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLG 233 (335)
Q Consensus 203 q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl~ 233 (335)
|+..+.+ ..-.++..+|+++|+.++..+.+.
T Consensus 266 ~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 299 (366)
T 1tkk_A 266 NIKLMKAGGISGAEKINAMAEACGVECMVGSMIE 299 (366)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHHTCCEEECCSSC
T ss_pred EeehhhhcCHHHHHHHHHHHHHcCCcEEecCccc
Confidence 5543332 222678999999999998876653
No 77
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=60.49 E-value=97 Score=27.96 Aligned_cols=145 Identities=16% Similarity=0.179 Sum_probs=76.9
Q ss_pred hHHHHHHHHHHHHcCCCEeeCCCCcC--C---HHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHH
Q 035739 48 TDALKLVVLEAIKLGYRHFDTAAMYG--T---EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 122 (335)
Q Consensus 48 ~~~~~~~l~~A~~~Gin~~DtA~~Yg--s---e~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~ 122 (335)
...+.+.+..+++.+.. .|+ . .+.+.+.+.... |+....+++++++ ...++++..++
T Consensus 76 ~~~v~~a~~~~~~~~~~------~y~~~~~~l~~~l~~~l~~~~--g~~~~~~~v~~~~----------g~~ea~~~a~~ 137 (421)
T 3l8a_A 76 VPEIKEAIINYGREHIF------GYNYFNDDLYQAVIDWERKEH--DYAVVKEDILFID----------GVVPAISIALQ 137 (421)
T ss_dssp CHHHHHHHHHHHHHCCS------SCBCCCHHHHHHHHHHHHHHH--CCCCCGGGEEEES----------CHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCCc------CCCCCCHHHHHHHHHHHHHHh--CCCCCHHHEEEcC----------CHHHHHHHHHH
Confidence 45677888888887643 333 2 223334443321 3111566677652 23445555555
Q ss_pred HhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEec------CccHHHHHHHHHhcC
Q 035739 123 ALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLS------NFSRKKIETILTFAT 196 (335)
Q Consensus 123 ~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs------~~~~~~l~~~~~~~~ 196 (335)
.+ +..=|-+++..|.. ......++.+ ..++..+-+. ..+.+.++++++..+
T Consensus 138 ~~-~~~gd~Vi~~~~~y--------------------~~~~~~~~~~--g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~ 194 (421)
T 3l8a_A 138 AF-SEKGDAVLINSPVY--------------------YPFARTIRLN--DHRLVENSLQIINGRFEIDFEQLEKDIIDNN 194 (421)
T ss_dssp HH-SCTEEEEEEEESCC--------------------HHHHHHHHHT--TEEEEEEECEEETTEEECCHHHHHHHHHHTT
T ss_pred Hh-cCCCCEEEECCCCc--------------------HHHHHHHHHC--CCEEEeccccccCCCeeeCHHHHHHHhhccC
Confidence 55 23446677776632 2333333322 2344444442 146788888886433
Q ss_pred CCCccccCCCCcc---cc---cHHHHHHHHHcCCeEEEeccCC
Q 035739 197 IPPSINQVEMHPV---WQ---QRKLIEFCKAKGIIVTAYSPLG 233 (335)
Q Consensus 197 ~~~~~~q~~~~~~---~~---~~~~l~~~~~~gi~v~a~~pl~ 233 (335)
...+++..+-|+. .. -.++.+.|+++|+.++.=...+
T Consensus 195 ~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~ 237 (421)
T 3l8a_A 195 VKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQ 237 (421)
T ss_dssp EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred CeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcccc
Confidence 3333333333332 11 1678899999999999876654
No 78
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=59.40 E-value=84 Score=28.33 Aligned_cols=152 Identities=7% Similarity=-0.033 Sum_probs=87.8
Q ss_pred ChHHHHHHHHHHHHc-CCCEeeCCCCcC-C--HHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKL-GYRHFDTAAMYG-T--EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 122 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~-Gin~~DtA~~Yg-s--e~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~ 122 (335)
+.++..+..+.+++. |++.|-.=-... . +...=+++++.+ -+++-|..... ...+.+...+ +-+.|+
T Consensus 139 ~~~~~~~~a~~~~~~~G~~~~K~K~g~~~~~~d~~~v~avR~a~-------g~~~~l~vDan-~~~~~~~a~~-~~~~l~ 209 (367)
T 3dg3_A 139 DPVKMVAEAERIRETYGINTFKVKVGRRPVQLDTAVVRALRERF-------GDAIELYVDGN-RGWSAAESLR-AMREMA 209 (367)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECCCSSTHHHHHHHHHHHHHH-------GGGSEEEEECT-TCSCHHHHHH-HHHHTT
T ss_pred CHHHHHHHHHHHHHhcCccEEEEeeCCChhhhHHHHHHHHHHHh-------CCCCEEEEECC-CCCCHHHHHH-HHHHHH
Confidence 567777778888888 999886432212 1 122224555542 24455555542 2333333221 223334
Q ss_pred HhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCcc
Q 035739 123 ALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSI 201 (335)
Q Consensus 123 ~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~ 201 (335)
.++ +.++..|... +-++.+.++++.-.|. ..|=+-++..++.++++.... .+
T Consensus 210 ~~~-----i~~iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~ 262 (367)
T 3dg3_A 210 DLD-----LLFAEELCPA--------------------DDVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSA--TA 262 (367)
T ss_dssp TSC-----CSCEESCSCT--------------------TSHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSC--SE
T ss_pred HhC-----CCEEECCCCc--------------------ccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCC--CE
Confidence 444 4456666321 1246667777765555 445566778889998886654 35
Q ss_pred ccCCCCcc--cccHHHHHHHHHcCCeEEEeccCCC
Q 035739 202 NQVEMHPV--WQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 202 ~q~~~~~~--~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
+|+...-+ ..-.++..+|+++|+.++..+.+.+
T Consensus 263 v~~k~~~~Git~~~~ia~~A~~~gi~~~~~~~~es 297 (367)
T 3dg3_A 263 ISIKTARTGFTGSTRVHHLAEGLGLDMVMGNQIDG 297 (367)
T ss_dssp EEECHHHHTTHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred EEeehhhhhHHHHHHHHHHHHHcCCeEEECCcCCc
Confidence 65554433 2226789999999999998765544
No 79
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=58.39 E-value=54 Score=28.83 Aligned_cols=104 Identities=15% Similarity=0.093 Sum_probs=59.8
Q ss_pred hhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCccHHHHHH
Q 035739 111 DHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSRKKIET 190 (335)
Q Consensus 111 ~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~ 190 (335)
..-+..+-+.|.++|+++|.+-....|... + . ..+.++.+..+.+...++..++. -+...++.
T Consensus 29 ~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~-~-------------~--~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~ 91 (302)
T 2ftp_A 29 VADKIRLVDDLSAAGLDYIEVGSFVSPKWV-P-------------Q--MAGSAEVFAGIRQRPGVTYAALA-PNLKGFEA 91 (302)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECSCTTTC-G-------------G--GTTHHHHHHHSCCCTTSEEEEEC-CSHHHHHH
T ss_pred HHHHHHHHHHHHHcCcCEEEECCCcCcccc-c-------------c--ccCHHHHHHHhhhcCCCEEEEEe-CCHHHHHH
Confidence 345666777889999999998764433211 0 0 11223344555545566666665 46778888
Q ss_pred HHHhcCCCCccccCCCCccc---------c-----cHHHHHHHHHcCCeEEEeccC
Q 035739 191 ILTFATIPPSINQVEMHPVW---------Q-----QRKLIEFCKAKGIIVTAYSPL 232 (335)
Q Consensus 191 ~~~~~~~~~~~~q~~~~~~~---------~-----~~~~l~~~~~~gi~v~a~~pl 232 (335)
+++. +++.+.+-...|..+ . -.+.+++|+++|+.|.++-..
T Consensus 92 a~~a-G~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~ 146 (302)
T 2ftp_A 92 ALES-GVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISC 146 (302)
T ss_dssp HHHT-TCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHhC-CcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEE
Confidence 8874 443222212222211 0 156799999999998765433
No 80
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=56.99 E-value=32 Score=29.03 Aligned_cols=67 Identities=12% Similarity=0.027 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHc-CCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEE
Q 035739 159 YRGVWEAMEESQML-GLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTA 228 (335)
Q Consensus 159 ~~~~~~~L~~l~~~-Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a 228 (335)
.-+++.+|.++++. ++|-.+|+.+... .+..+.+..+.+ +.+..|.-.+.-...+..+++.|+.++.
T Consensus 92 ~~Dil~aL~~a~~~~~kIavVg~~~~~~-~~~~i~~ll~~~--i~~~~~~~~ee~~~~i~~l~~~G~~vVV 159 (225)
T 2pju_A 92 GYDVLQFLAKAGKLTSSIGVVTYQETIP-ALVAFQKTFNLR--LDQRSYITEEDARGQINELKANGTEAVV 159 (225)
T ss_dssp HHHHHHHHHHTTCTTSCEEEEEESSCCH-HHHHHHHHHTCC--EEEEEESSHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHhhCCcEEEEeCchhhh-HHHHHHHHhCCc--eEEEEeCCHHHHHHHHHHHHHCCCCEEE
Confidence 66889999999886 6777888887763 345555545443 4444444433336789999999999887
No 81
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=56.97 E-value=1.1e+02 Score=27.59 Aligned_cols=151 Identities=15% Similarity=0.063 Sum_probs=88.4
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcC-CHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhC
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYG-TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQ 125 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg-se~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg 125 (335)
+.++..+..+++.+.|++.|..- .| .-+..-+.++.. .+.+ . ++-|..+.. ..++.+...+- -+.|+.+|
T Consensus 147 ~~e~~~~~a~~~~~~Gf~~iKik--~g~~~~~~~e~v~av-r~a~--g--d~~l~vD~n-~~~~~~~a~~~-~~~l~~~~ 217 (384)
T 2pgw_A 147 TAEELARDAAVGHAQGERVFYLK--VGRGEKLDLEITAAV-RGEI--G--DARLRLDAN-EGWSVHDAINM-CRKLEKYD 217 (384)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEE--CCSCHHHHHHHHHHH-HTTS--T--TCEEEEECT-TCCCHHHHHHH-HHHHGGGC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC--cCCCHHHHHHHHHHH-HHHc--C--CcEEEEecC-CCCCHHHHHHH-HHHHHhcC
Confidence 56777788888899999999852 22 222222233321 1122 3 566666653 23445544443 33567777
Q ss_pred CCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecC-ccHHHHHHHHHhcCCCCccccC
Q 035739 126 MEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSN-FSRKKIETILTFATIPPSINQV 204 (335)
Q Consensus 126 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~-~~~~~l~~~~~~~~~~~~~~q~ 204 (335)
+++ +..|.. .+-|+.+.++++.-.|--++--+ ++.+.+.++++.... .++|+
T Consensus 218 i~~-----iEqP~~--------------------~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~--d~v~i 270 (384)
T 2pgw_A 218 IEF-----IEQPTV--------------------SWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAA--DMICI 270 (384)
T ss_dssp CSE-----EECCSC--------------------TTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCC--SEEEE
T ss_pred CCE-----EeCCCC--------------------hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCC--CEEEE
Confidence 665 444421 12356677777765666555444 468889999886543 35555
Q ss_pred CCCcc---cccHHHHHHHHHcCCeEEEeccCC
Q 035739 205 EMHPV---WQQRKLIEFCKAKGIIVTAYSPLG 233 (335)
Q Consensus 205 ~~~~~---~~~~~~l~~~~~~gi~v~a~~pl~ 233 (335)
..+-+ ..-.++..+|+++|+.++..+.+.
T Consensus 271 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 302 (384)
T 2pgw_A 271 GPREIGGIQPMMKAAAVAEAAGLKICIHSSFT 302 (384)
T ss_dssp CHHHHTSHHHHHHHHHHHHHTTCCEEECCCSC
T ss_pred cchhhCCHHHHHHHHHHHHHCCCeEeeccCcC
Confidence 43322 222678999999999998875443
No 82
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=56.75 E-value=26 Score=28.84 Aligned_cols=67 Identities=12% Similarity=0.050 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHc-CCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEE
Q 035739 159 YRGVWEAMEESQML-GLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTA 228 (335)
Q Consensus 159 ~~~~~~~L~~l~~~-Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a 228 (335)
.-+++.+|.++++. ++|-.+|+.+.. ..+..+.+..+. .+.+..|+-.+.-...+..+++.|+.++.
T Consensus 80 ~~Dil~al~~a~~~~~kIavvg~~~~~-~~~~~~~~ll~~--~i~~~~~~~~~e~~~~i~~l~~~G~~vvV 147 (196)
T 2q5c_A 80 RFDTMRAVYNAKRFGNELALIAYKHSI-VDKHEIEAMLGV--KIKEFLFSSEDEITTLISKVKTENIKIVV 147 (196)
T ss_dssp HHHHHHHHHHHGGGCSEEEEEEESSCS-SCHHHHHHHHTC--EEEEEEECSGGGHHHHHHHHHHTTCCEEE
T ss_pred HhHHHHHHHHHHhhCCcEEEEeCcchh-hHHHHHHHHhCC--ceEEEEeCCHHHHHHHHHHHHHCCCeEEE
Confidence 67899999999887 567777777765 223334343433 34555555444447799999999999987
No 83
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=56.22 E-value=1.2e+02 Score=27.67 Aligned_cols=148 Identities=13% Similarity=0.046 Sum_probs=87.7
Q ss_pred ChHHHHHHH-HHHHHcCCCEeeCCCCc-------CCHH--HHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHH
Q 035739 47 DTDALKLVV-LEAIKLGYRHFDTAAMY-------GTEK--ALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPA 116 (335)
Q Consensus 47 ~~~~~~~~l-~~A~~~Gin~~DtA~~Y-------gse~--~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~ 116 (335)
+.++..+.+ +.+++.|++.|-.=-.. ..+. ..=+++++.+ -+++-|...... ..+.+...+
T Consensus 139 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~-------g~~~~l~vDaN~-~~~~~~A~~- 209 (393)
T 4dwd_A 139 SVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELL-------GPDAVIGFDANN-GYSVGGAIR- 209 (393)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHH-------CTTCCEEEECTT-CCCHHHHHH-
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHh-------CCCCeEEEECCC-CCCHHHHHH-
Confidence 567777777 88899999998643221 1111 1224555532 234445555432 333433322
Q ss_pred HHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhc
Q 035739 117 LKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFA 195 (335)
Q Consensus 117 ~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~ 195 (335)
+-+.|+.+++++ +..|... +-++.+.++++.-.|. ..|=+-++..++.++++..
T Consensus 210 ~~~~L~~~~i~~-----iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 264 (393)
T 4dwd_A 210 VGRALEDLGYSW-----FEEPVQH--------------------YHVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG 264 (393)
T ss_dssp HHHHHHHTTCSE-----EECCSCT--------------------TCHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT
T ss_pred HHHHHHhhCCCE-----EECCCCc--------------------ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC
Confidence 334566666554 4555321 1246677777765554 4445567788898888866
Q ss_pred CCCCccccCCCCcc---cccHHHHHHHHHcCCeEEEecc
Q 035739 196 TIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSP 231 (335)
Q Consensus 196 ~~~~~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~p 231 (335)
. .++|+....+ ..-.++..+|+++|+.++..+.
T Consensus 265 -~--d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 300 (393)
T 4dwd_A 265 -V--RMVQPDIVKMGGITGMMQCAALAHAHGVEFVPHQT 300 (393)
T ss_dssp -C--CEECCCTTTTTHHHHHHHHHHHHHHHTCEECCCCC
T ss_pred -C--CEEEeCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 4 5777766544 2236789999999999987665
No 84
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=54.98 E-value=97 Score=27.45 Aligned_cols=99 Identities=13% Similarity=0.108 Sum_probs=67.1
Q ss_pred hHHHHHHHHHHHhCCCccceEEee-cCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHc-CCccEEEe-cC----cc
Q 035739 112 HVIPALKKSLSALQMEYLDLYLVH-WPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQML-GLTKSIGL-SN----FS 184 (335)
Q Consensus 112 ~i~~~~e~sL~~Lg~d~iDl~~lH-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~-Gkir~iGv-s~----~~ 184 (335)
.+.+..++.. ..|.|.||+=.-. .|... ..+.++.++.++.+++. +. -|.| -+ ++
T Consensus 75 ~~~~~A~~~v-~~GAdiIDIg~~StrP~~~---------------~vs~eee~~vV~~v~~~~~v--plsI~DT~~~~~~ 136 (310)
T 2h9a_B 75 DPVAWAKKCV-EYGADIVALRLVSAHPDGQ---------------NRSGAELAEVCKAVADAIDV--PLMIIGCGVEEKD 136 (310)
T ss_dssp CHHHHHHHHH-HTTCSEEEEECGGGCTTTT---------------CCCHHHHHHHHHHHHHHCSS--CEEEECCSCHHHH
T ss_pred HHHHHHHHHH-HcCCcEEEEeCccCCCCCC---------------CCCHHHHHHHHHHHHHhCCc--eEEEECCCCCCCC
Confidence 3444444444 8898888887643 23211 34477777788888776 33 3777 77 88
Q ss_pred HHHHHHHHHhcC-CCCccccCCCCcccccHHHHHHHHHcCCeEEEecc
Q 035739 185 RKKIETILTFAT-IPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSP 231 (335)
Q Consensus 185 ~~~l~~~~~~~~-~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~p 231 (335)
++.++++++... -++.++-+.-. +..++++.|+++|.+++.+.+
T Consensus 137 ~~V~eaal~aga~~k~iINdvs~~---~~~~~~~~aa~~g~~vv~m~~ 181 (310)
T 2h9a_B 137 AEIFPVIGEALSGRNCLLSSATKD---NYKPIVATCMVHGHSVVASAP 181 (310)
T ss_dssp HHHHHHHHHHTTTSCCEEEEECTT---THHHHHHHHHHHTCEEEEECS
T ss_pred HHHHHHHHHhCCCCCCEEEECCCC---ccHHHHHHHHHhCCCEEEECh
Confidence 899999999764 24555544332 347899999999999999865
No 85
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=54.87 E-value=18 Score=32.56 Aligned_cols=105 Identities=13% Similarity=0.172 Sum_probs=69.8
Q ss_pred CCccEEEecCccHHHHHHHHHhcC--CCCccccCC-CCc-c----cccHHHHHHHHHcCCeEEEeccCCCCCCcCCCCcc
Q 035739 173 GLTKSIGLSNFSRKKIETILTFAT--IPPSINQVE-MHP-V----WQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQV 244 (335)
Q Consensus 173 Gkir~iGvs~~~~~~l~~~~~~~~--~~~~~~q~~-~~~-~----~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~~ 244 (335)
.++-.+-=.+.+.+...++++... ++ . ...+ ++- + +|+..+.+++++.++-++.-++-++
T Consensus 171 ~kv~~vsQTT~s~~~~~~iv~~L~~r~p-~-i~~~~~ntIC~AT~~RQ~av~~lA~~vD~miVVGg~nSS---------- 238 (328)
T 3szu_A 171 EKLSFMTQTTLSVDDTSDVIDALRKRFP-K-IVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSS---------- 238 (328)
T ss_dssp TSEEEEECTTSCHHHHHHHHHHHHHHCT-T-CBCCSSCSCCHHHHHHHHHHHHHHHHCSEEEEECCTTCH----------
T ss_pred CeEEEEEecCCcHHHHHHHHHHHHHhCc-c-cccCCCCCcCHHHHHHHHHHHHHHHhCCEEEEeCCCCCc----------
Confidence 566666667777776666555432 22 1 1111 222 2 3457788999999988887444332
Q ss_pred CChHHHHHHHHHhCC------CHHHHHHHHHhhcC-CEEEeCCCCHHHHHHhh
Q 035739 245 LENEALKEIAKARGK------TVAQVSLRWIVEQG-ATVVIKSLNLERMKQNL 290 (335)
Q Consensus 245 ~~~~~l~~la~~~g~------s~~q~al~~~l~~~-~~vi~g~~~~~~l~enl 290 (335)
+-..|.++|++.|. ++.++-..|+-... +.+..|+|+|+.+-+.+
T Consensus 239 -NT~rL~eia~~~g~~ty~Ie~~~el~~~wl~g~~~VGITAGASTP~~lieeV 290 (328)
T 3szu_A 239 -NSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNV 290 (328)
T ss_dssp -HHHHHHHHHHHTTCEEEEESSGGGCCHHHHTTCSEEEEEECTTCCHHHHHHH
T ss_pred -hHHHHHHHHHHhCCCEEEeCChHHCCHHHhCCCCEEEEeecCCCCHHHHHHH
Confidence 45789999999984 67888889986655 67889999987764433
No 86
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=53.75 E-value=1e+02 Score=27.90 Aligned_cols=34 Identities=15% Similarity=0.106 Sum_probs=26.2
Q ss_pred HHHHHHHHcCCccEEEecCccHHHHHHHHHhcCC
Q 035739 164 EAMEESQMLGLTKSIGLSNFSRKKIETILTFATI 197 (335)
Q Consensus 164 ~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~ 197 (335)
+.+.++++.=.+--++...++.+..+++++....
T Consensus 284 ~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~g~a 317 (364)
T 1vyr_A 284 AFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLI 317 (364)
T ss_dssp HHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSC
T ss_pred HHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCc
Confidence 4566677766777888888899999999886544
No 87
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=53.27 E-value=1e+02 Score=28.10 Aligned_cols=65 Identities=15% Similarity=-0.030 Sum_probs=38.7
Q ss_pred HHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHh
Q 035739 115 PALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTF 194 (335)
Q Consensus 115 ~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~ 194 (335)
..+-+.|+..|+|||++ |....... ... . .++.+.++++.=.+--|+...++++..+++++.
T Consensus 258 ~~la~~le~~Gvd~i~v---~~~~~~~~------~~~------~---~~~~~~~ik~~~~iPvi~~Ggi~~~~a~~~l~~ 319 (377)
T 2r14_A 258 FYLAGELDRRGLAYLHF---NEPDWIGG------DIT------Y---PEGFREQMRQRFKGGLIYCGNYDAGRAQARLDD 319 (377)
T ss_dssp HHHHHHHHHTTCSEEEE---ECCC------------C------C---CTTHHHHHHHHCCSEEEEESSCCHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEE---eCCcccCC------CCc------c---hHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHC
Confidence 34556677888777654 54321100 000 0 134455666665677888888888889999886
Q ss_pred cCC
Q 035739 195 ATI 197 (335)
Q Consensus 195 ~~~ 197 (335)
...
T Consensus 320 g~a 322 (377)
T 2r14_A 320 NTA 322 (377)
T ss_dssp TSC
T ss_pred CCc
Confidence 544
No 88
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=52.41 E-value=1.1e+02 Score=27.66 Aligned_cols=34 Identities=9% Similarity=-0.084 Sum_probs=25.6
Q ss_pred HHHHHHHHcCCccEEEecCccHHHHHHHHHhcCC
Q 035739 164 EAMEESQMLGLTKSIGLSNFSRKKIETILTFATI 197 (335)
Q Consensus 164 ~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~ 197 (335)
+.+.++++.=++--|++..++++..+++++....
T Consensus 283 ~~~~~i~~~~~iPvi~~Ggi~~~~a~~~l~~g~a 316 (365)
T 2gou_A 283 SFKRALREAYQGVLIYAGRYNAEKAEQAINDGLA 316 (365)
T ss_dssp HHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSC
T ss_pred HHHHHHHHHCCCcEEEeCCCCHHHHHHHHHCCCc
Confidence 4456666665677899999999999999886543
No 89
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=52.32 E-value=1.3e+02 Score=27.02 Aligned_cols=147 Identities=12% Similarity=0.070 Sum_probs=86.2
Q ss_pred ChHHHHHHHHHHHHcCCCEeeC--CCCc-C---C-HH--HHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDT--AAMY-G---T-EK--ALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPAL 117 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~Dt--A~~Y-g---s-e~--~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~ 117 (335)
+.++..+..+++.+.|++.|.. +..| + . +. .+=+++++.+ -+++-|..+.. ..++.+...+-+
T Consensus 149 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~-------g~d~~l~vDan-~~~~~~~a~~~~ 220 (382)
T 1rvk_A 149 TPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAV-------GPDIRLMIDAF-HWYSRTDALALG 220 (382)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHH-------CTTSEEEEECC-TTCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHh-------CCCCeEEEECC-CCCCHHHHHHHH
Confidence 5677778888889999998863 3222 1 1 11 1123445431 23566666653 234445444433
Q ss_pred HHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEE-ecCcc-HHHHHHHHHhc
Q 035739 118 KKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIG-LSNFS-RKKIETILTFA 195 (335)
Q Consensus 118 e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iG-vs~~~-~~~l~~~~~~~ 195 (335)
+.|+.++++ ++..|... +-++.+.++++.-.|--.+ =+-++ .+.+.++++..
T Consensus 221 -~~l~~~~i~-----~iE~P~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~ 274 (382)
T 1rvk_A 221 -RGLEKLGFD-----WIEEPMDE--------------------QSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAG 274 (382)
T ss_dssp -HHHHTTTCS-----EEECCSCT--------------------TCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTT
T ss_pred -HHHHhcCCC-----EEeCCCCh--------------------hhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcC
Confidence 356666655 45555321 2356677777765555444 44456 78899998865
Q ss_pred CCCCccccCCCCcc---cccHHHHHHHHHcCCeEEEe
Q 035739 196 TIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 196 ~~~~~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~ 229 (335)
.. .++|+..+-+ ..-.++..+|+++|+.++..
T Consensus 275 ~~--d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 275 AC--DILRTGVNDVGGITPALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp CC--SEEEECHHHHTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CC--CEEeeCchhcCCHHHHHHHHHHHHHcCCeEeec
Confidence 43 4555543322 22267899999999999987
No 90
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=52.25 E-value=88 Score=28.85 Aligned_cols=148 Identities=18% Similarity=0.183 Sum_probs=88.3
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCC-------HH--HHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGT-------EK--ALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPAL 117 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygs-------e~--~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~ 117 (335)
+.++..+..+++.+.|++.|..=-..+. +. ..=+++|+. --+++-|...... ..+.+...+ +
T Consensus 179 ~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avRea-------vG~d~~L~vDaN~-~~~~~~Ai~-~ 249 (412)
T 3stp_A 179 SIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREV-------IGYDNDLMLECYM-GWNLDYAKR-M 249 (412)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHH-------HCSSSEEEEECTT-CSCHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHH-------cCCCCeEEEECCC-CCCHHHHHH-H
Confidence 6677888888999999999875433320 11 122345543 1245566666532 334443332 2
Q ss_pred HHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcC
Q 035739 118 KKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFAT 196 (335)
Q Consensus 118 e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~ 196 (335)
-+.|+.++++ ++..|... +-++.+.++++.-.|. ..|=+-++...+.++++...
T Consensus 250 ~~~Le~~~i~-----~iEeP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a 304 (412)
T 3stp_A 250 LPKLAPYEPR-----WLEEPVIA--------------------DDVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKA 304 (412)
T ss_dssp HHHHGGGCCS-----EEECCSCT--------------------TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTC
T ss_pred HHHHHhcCCC-----EEECCCCc--------------------ccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCC
Confidence 3445666544 45555321 1356778888876665 44556677889999988654
Q ss_pred CCCccccCCCCcc---cccHHHHHHHHHcCCeEEEec
Q 035739 197 IPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYS 230 (335)
Q Consensus 197 ~~~~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~ 230 (335)
. +++|+...-+ ..-.++...|+++|+.++..+
T Consensus 305 ~--D~v~ik~~~~GGit~a~kia~~A~a~gi~v~~h~ 339 (412)
T 3stp_A 305 V--SVLQYDTNRVGGITAAQKINAIAEAAQIPVIPHA 339 (412)
T ss_dssp C--SEECCCHHHHTHHHHHHHHHHHHHHHTCCBCCSS
T ss_pred C--CEEecChhhcCCHHHHHHHHHHHHHcCCEEEecc
Confidence 3 4666554432 122678899999999987654
No 91
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=52.07 E-value=1.5e+02 Score=27.42 Aligned_cols=144 Identities=13% Similarity=0.157 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHcCCCEeeCCCCcC---CHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhC
Q 035739 49 DALKLVVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQ 125 (335)
Q Consensus 49 ~~~~~~l~~A~~~Gin~~DtA~~Yg---se~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg 125 (335)
++..+..+++.+.|++.|..=-.-. ..+.+ +++++.+ -+++-|..... ..++.+...+-++. |+.++
T Consensus 187 e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v-~avR~av-------G~d~~l~vDan-~~~~~~eai~~~~~-L~~~~ 256 (428)
T 3bjs_A 187 ESLAEEAQEYIARGYKALKLRIGDAARVDIERV-RHVRKVL-------GDEVDILTDAN-TAYTMADARRVLPV-LAEIQ 256 (428)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCSCHHHHHHHH-HHHHHHH-------CTTSEEEEECT-TCCCHHHHHHHHHH-HHHTT
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH-HHHHHhc-------CCCCEEEEECC-CCCCHHHHHHHHHH-HHhcC
Confidence 6677777888899999886421111 11222 3455431 23455555553 23455555554433 77777
Q ss_pred CCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCC-ccEE-EecCccHHHHHHHHHhcCCCCcccc
Q 035739 126 MEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGL-TKSI-GLSNFSRKKIETILTFATIPPSINQ 203 (335)
Q Consensus 126 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gk-ir~i-Gvs~~~~~~l~~~~~~~~~~~~~~q 203 (335)
+++ +..|... +-++.+.++++.-. |--. |=+-++...+.++++... ..++|
T Consensus 257 i~~-----iEqP~~~--------------------~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~--~d~v~ 309 (428)
T 3bjs_A 257 AGW-----LEEPFAC--------------------NDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGA--VQVWQ 309 (428)
T ss_dssp CSC-----EECCSCT--------------------TCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCC--EEEEC
T ss_pred CCE-----EECCCCc--------------------cCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCC--CCEEE
Confidence 665 4444221 23566777776644 5433 344456888888887543 34666
Q ss_pred CCCCcc---cccHHHHHHHHHcCCeEEEe
Q 035739 204 VEMHPV---WQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 204 ~~~~~~---~~~~~~l~~~~~~gi~v~a~ 229 (335)
+..+-. ..-.++..+|+++|+.++..
T Consensus 310 ik~~~~GGitea~~ia~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 310 PDLSKCGGITEGIRIAAMASAYRIPINAH 338 (428)
T ss_dssp CBTTTSSCHHHHHHHHHHHHHTTCCBCCB
T ss_pred eCccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 655543 22267899999999998776
No 92
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=51.81 E-value=1e+02 Score=25.44 Aligned_cols=89 Identities=10% Similarity=0.012 Sum_probs=54.2
Q ss_pred HHHHHHcCCccEEEecCcc------HHHHHHHHHhcCCCCccccCCCCcccc------c------HHHHHHHHHcCCeEE
Q 035739 166 MEESQMLGLTKSIGLSNFS------RKKIETILTFATIPPSINQVEMHPVWQ------Q------RKLIEFCKAKGIIVT 227 (335)
Q Consensus 166 L~~l~~~Gkir~iGvs~~~------~~~l~~~~~~~~~~~~~~q~~~~~~~~------~------~~~l~~~~~~gi~v~ 227 (335)
...+.+. .|.-||-.... ...+.++....++ ...++++.+.+ . ..++..|++.|+.++
T Consensus 89 n~~a~~~-~vDII~Hp~~~~~~~~~~~~~a~~A~e~gv---~lEIn~s~~~~~~~~~R~~~~~~~~~il~l~k~~g~~iv 164 (212)
T 1v77_A 89 IRYSIEK-GVDAIISPWVNRKDPGIDHVLAKLMVKKNV---ALGFSLRPLLYSNPYERANLLRFMMKAWKLVEKYKVRRF 164 (212)
T ss_dssp HHHHHHT-TCSEEECTTTTSSSCSCCHHHHHHHHHHTC---EEEEESHHHHHSCHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHhC-CCCEEecccccccCCCCCHHHHHHHHHCCe---EEEEECcHHhcCCcchHHHHHHHHHHHHHHHHhcCCCEE
Confidence 3346667 88888865433 1233344343443 44455554421 1 368999999999888
Q ss_pred EeccCCCCCCcCCCCccCChHHHHHHHHHhCCCHHHH
Q 035739 228 AYSPLGAVGKIYGSNQVLENEALKEIAKARGKTVAQV 264 (335)
Q Consensus 228 a~~pl~~~G~l~~~~~~~~~~~l~~la~~~g~s~~q~ 264 (335)
.-|--.. +..+.....+..+++..|.+..++
T Consensus 165 isSDAh~------~~~v~~~~~~~~l~~~~G~~~e~~ 195 (212)
T 1v77_A 165 LTSSAQE------KWDVRYPRDLISLGVVIGMEIPQA 195 (212)
T ss_dssp EECCCSS------GGGCCCHHHHHHHHHHTTCCHHHH
T ss_pred EeCCCCC------hhhcCCHHHHHHHHHHcCCCHHHH
Confidence 7653332 133445678888999998877653
No 93
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=51.74 E-value=1e+02 Score=25.42 Aligned_cols=74 Identities=9% Similarity=-0.022 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhc-CCCCcc--ccCCCCcccc---cHHHHHHHHHcCCeEEEeccC
Q 035739 159 YRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFA-TIPPSI--NQVEMHPVWQ---QRKLIEFCKAKGIIVTAYSPL 232 (335)
Q Consensus 159 ~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~-~~~~~~--~q~~~~~~~~---~~~~l~~~~~~gi~v~a~~pl 232 (335)
.+++++...+-.++.-|++|=|.+.+......+++.. ++..++ .+..|.-... ..+..+..++.|+.|+..+=+
T Consensus 28 T~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~tH~ 107 (201)
T 1vp8_A 28 TEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEELRKRGAKIVRQSHI 107 (201)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHHHHTTCEEEECCCT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEEecc
Confidence 5566665444444445999999999877766666654 223333 3333322211 278999999999999886543
No 94
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=51.74 E-value=1.2e+02 Score=26.24 Aligned_cols=207 Identities=9% Similarity=-0.029 Sum_probs=108.6
Q ss_pred ceEEcCCCCCCccCCcceeeCcccCccccccCCCChHHHHHHHHHHH-HcCCCEeeCCCCcCC---HHHHHHHHHHHHHc
Q 035739 13 PKLKLSSSSGHLNMPVIGLGCAVDKCLRCAVDKSDTDALKLVVLEAI-KLGYRHFDTAAMYGT---EKALGEAIAEALRL 88 (335)
Q Consensus 13 ~~~~lg~t~g~~~vs~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~-~~Gin~~DtA~~Ygs---e~~lG~~l~~~~~~ 88 (335)
....+++. --=|+|-+||..+.+ .+++..|+ ..|-..+=.|--=-+ ...-...+.
T Consensus 9 d~l~i~~~---~f~SRl~~Gtgky~~-------------~~~~~~a~~asg~e~vtva~rR~~~~~~~~~~~~~~----- 67 (265)
T 1wv2_A 9 TPFVIAGR---TYGSRLLVGTGKYKD-------------LDETRRAIEASGAEIVTVAVRRTNIGQNPDEPNLLD----- 67 (265)
T ss_dssp CCEEETTE---EESCCEEECCSCSSS-------------HHHHHHHHHHSCCSEEEEEGGGCCC----------------
T ss_pred CCeEECCE---EeecceEEecCCCCC-------------HHHHHHHHHHhCCCeEEEEEEeeccccCCCcchHHh-----
Confidence 34677763 445999999998863 34556665 346555533311001 000012222
Q ss_pred CCCCCCCceEEeeccCCCCCChhhHHHHHHHHHH-HhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 035739 89 GLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS-ALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAME 167 (335)
Q Consensus 89 g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~-~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 167 (335)
-+ ++..+.+.=.. ...++.+...+..+-..+ .+|+++|-|..+..+. +...+..+++++.+
T Consensus 68 ~i--~~~~~~~lpNT-ag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~---------------~llpD~~~tv~aa~ 129 (265)
T 1wv2_A 68 VI--PPDRYTILPNT-AGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQK---------------TLFPNVVETLKAAE 129 (265)
T ss_dssp ----CTTTSEEEEEC-TTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTT---------------TCCBCHHHHHHHHH
T ss_pred hh--hhcCCEECCcC-CCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCcc---------------ccCcCHHHHHHHHH
Confidence 12 34444443222 123445666666666666 6788888877776542 22345889999999
Q ss_pred HHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccC-----CCCcccccHHHHHHHHHc-CCeEEEeccCCCCCCcCCC
Q 035739 168 ESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQV-----EMHPVWQQRKLIEFCKAK-GIIVTAYSPLGAVGKIYGS 241 (335)
Q Consensus 168 ~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~-----~~~~~~~~~~~l~~~~~~-gi~v~a~~pl~~~G~l~~~ 241 (335)
+|+++|..- +=+++-++....++.+ .+.. ++.- --+.-....++++..++. ++.|++ .+ |+
T Consensus 130 ~L~~~Gf~V-lpy~~dd~~~akrl~~-~G~~--aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vPVI~----eG-GI---- 196 (265)
T 1wv2_A 130 QLVKDGFDV-MVYTSDDPIIARQLAE-IGCI--AVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLV----DA-GV---- 196 (265)
T ss_dssp HHHTTTCEE-EEEECSCHHHHHHHHH-SCCS--EEEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEE----ES-CC----
T ss_pred HHHHCCCEE-EEEeCCCHHHHHHHHH-hCCC--EEEeCCccCCCCCCcCCHHHHHHHHhcCCCCEEE----eC-CC----
Confidence 999999864 3335555555555444 3322 2210 001001124555555544 677776 32 32
Q ss_pred CccCChHHHHHHHHHhCCCHHHHHHHHHhhcC-CEEEeCC-----CCHHHHHHhh
Q 035739 242 NQVLENEALKEIAKARGKTVAQVSLRWIVEQG-ATVVIKS-----LNLERMKQNL 290 (335)
Q Consensus 242 ~~~~~~~~l~~la~~~g~s~~q~al~~~l~~~-~~vi~g~-----~~~~~l~enl 290 (335)
.+|.+++.+.-+ | ..|++|+ .++.++.+.+
T Consensus 197 -----------------~TPsDAa~AmeL--GAdgVlVgSAI~~a~dP~~ma~af 232 (265)
T 1wv2_A 197 -----------------GTASDAAIAMEL--GCEAVLMNTAIAHAKDPVMMAEAM 232 (265)
T ss_dssp -----------------CSHHHHHHHHHH--TCSEEEESHHHHTSSSHHHHHHHH
T ss_pred -----------------CCHHHHHHHHHc--CCCEEEEChHHhCCCCHHHHHHHH
Confidence 256666665555 6 6666665 3466555444
No 95
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=51.44 E-value=1.2e+02 Score=27.67 Aligned_cols=152 Identities=11% Similarity=0.105 Sum_probs=90.3
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCC----cC-CHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAM----YG-TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSL 121 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~----Yg-se~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL 121 (335)
+.++..+.++.+++.|++.|-.=-. .+ .+..+ +.++.. ++. --+++-|...... .++.+. ..+.+
T Consensus 145 ~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~~~~~d~-~~v~av-R~a---~G~~~~L~vDaN~-~~~~~~----A~~~~ 214 (386)
T 3fv9_G 145 TPEAMRAKVARHRAQGFKGHSIKIGASEAEGGPALDA-ERITAC-LAD---RQPGEWYLADANN-GLTVEH----ALRML 214 (386)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCCTTTTHHHHHH-HHHHHH-TTT---CCTTCEEEEECTT-CCCHHH----HHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeccCCCCCCCHHHHH-HHHHHH-HHH---cCCCCeEEEECCC-CCCHHH----HHHHH
Confidence 5677788888899999999864322 12 12211 122221 112 1245667766532 233322 23345
Q ss_pred HHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCc
Q 035739 122 SALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPS 200 (335)
Q Consensus 122 ~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~ 200 (335)
++|. +..++ ++-.|.. -++.+.++++.-.|. ..|=+-++..++.++++.... .
T Consensus 215 ~~l~-~~~~i-~iEeP~~----------------------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~--d 268 (386)
T 3fv9_G 215 SLLP-PGLDI-VLEAPCA----------------------SWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLC--D 268 (386)
T ss_dssp HHSC-SSCCC-EEECCCS----------------------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTCC--S
T ss_pred HHhh-ccCCc-EEecCCC----------------------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCC--C
Confidence 5663 34567 7776621 246677777765554 556677788899998885543 4
Q ss_pred cccCCCCcc---cccHHHHHHHHHcCCeEEEeccCCC
Q 035739 201 INQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 201 ~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
++|+....+ ..-.++..+|+++|+.++..+.+.+
T Consensus 269 ~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 305 (386)
T 3fv9_G 269 GVGLKVSKQGGITPMLRQRAIAAAAGMVMSVQDTVGS 305 (386)
T ss_dssp EEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred EEEECccccCCHHHHHHHHHHHHHcCCEEEeCCCCCC
Confidence 565543332 2226789999999999998776654
No 96
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=51.06 E-value=76 Score=28.75 Aligned_cols=152 Identities=12% Similarity=0.075 Sum_probs=86.4
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCC---HHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGT---EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 123 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygs---e~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~ 123 (335)
+.++..+-.+.+++.|++.|-.=-.-.. +...=+++++.+ -+++-|...... ..+.+...+ +-+.|+.
T Consensus 146 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~-------g~~~~l~vDan~-~~~~~~A~~-~~~~l~~ 216 (377)
T 3my9_A 146 DFDADLERMRAMVPAGHTVFKMKTGVKPHAEELRILETMRGEF-------GERIDLRLDFNQ-ALTPFGAMK-ILRDVDA 216 (377)
T ss_dssp SHHHHHHHHHHHTTTTCCEEEEECSSSCHHHHHHHHHHHHHHH-------GGGSEEEEECTT-CCCTTTHHH-HHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCcHHHHHHHHHHHHHHh-------CCCCeEEEeCCC-CcCHHHHHH-HHHHHhh
Confidence 4555556677778889998864322211 112224556542 244555556532 233343332 3345566
Q ss_pred hCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCccc
Q 035739 124 LQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSIN 202 (335)
Q Consensus 124 Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~ 202 (335)
+++++ +..|... +-++.+.++++.-.|. ..|=+-++..++.++++.... .++
T Consensus 217 ~~i~~-----iEqP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~--d~v 269 (377)
T 3my9_A 217 FRPTF-----IEQPVPR--------------------RHLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAA--DAI 269 (377)
T ss_dssp TCCSC-----EECCSCT--------------------TCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCC--SEE
T ss_pred cCCCE-----EECCCCc--------------------cCHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCC--CEE
Confidence 66554 4455321 1246667777764454 455566778899998886654 355
Q ss_pred cCCCCcc---cccHHHHHHHHHcCCeEEEeccCCC
Q 035739 203 QVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 203 q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
|+...-+ ..-.++..+|+++|+.++..+.+.+
T Consensus 270 ~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~~~es 304 (377)
T 3my9_A 270 SVKIMKCGGLMKAQSLMAIADTAGLPGYGGTLWEG 304 (377)
T ss_dssp ECCHHHHTSHHHHHHHHHHHHHHTCCEECCEECCS
T ss_pred EecccccCCHHHHHHHHHHHHHcCCeEecCCCCCc
Confidence 5543332 2226788999999999976554543
No 97
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=51.00 E-value=1.3e+02 Score=27.48 Aligned_cols=150 Identities=8% Similarity=0.022 Sum_probs=90.7
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCc-CCHH--HHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMY-GTEK--ALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 123 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Y-gse~--~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~ 123 (335)
+.++..+.++.+++.|++.|..=-.- ..+. ..=+++++.+ ..+++-|...... .++.+. ..+.+++
T Consensus 164 ~~e~~~~~a~~~~~~G~~~~KlKvg~~~~~~d~~~v~avR~a~------gg~~~~L~vDaN~-~w~~~~----A~~~~~~ 232 (391)
T 4e8g_A 164 QPDEIARIAAEKVAEGFPRLQIKIGGRPVEIDIETVRKVWERI------RGTGTRLAVDGNR-SLPSRD----ALRLSRE 232 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSSCHHHHHHHHHHHHHHH------TTTTCEEEEECTT-CCCHHH----HHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEcCCCCCHHHHHHHHHHHHHHh------CCCCCeEEEeCCC-CCCHHH----HHHHHHH
Confidence 56777788888899999998643221 1111 1223454431 1155666666532 233322 2334455
Q ss_pred hCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCccc
Q 035739 124 LQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSIN 202 (335)
Q Consensus 124 Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~ 202 (335)
|. ..++ ++-.|. .-++.+.++++.-.|. +.|=+-++..++.++++.... .++
T Consensus 233 L~--~~~i-~iEeP~----------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~--d~v 285 (391)
T 4e8g_A 233 CP--EIPF-VLEQPC----------------------NTLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLC--DGF 285 (391)
T ss_dssp CT--TSCE-EEESCS----------------------SSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCC--SEE
T ss_pred Hh--hcCe-EEecCC----------------------ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCC--CEE
Confidence 54 3477 776661 1246677777765554 566677888899999885543 456
Q ss_pred cCCCCcc---cccHHHHHHHHHcCCeEEEeccCCC
Q 035739 203 QVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 203 q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
|+....+ ..-.++..+|+++|+.++..+.+.+
T Consensus 286 ~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 320 (391)
T 4e8g_A 286 GMKLTRIGGLQQMAAFRDICEARALPHSCDDAWGG 320 (391)
T ss_dssp EEEHHHHTSHHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred EeCccccCCHHHHHHHHHHHHHcCCeEEeCCcCCC
Confidence 5543322 2226789999999999998877754
No 98
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=50.81 E-value=12 Score=26.24 Aligned_cols=58 Identities=14% Similarity=0.215 Sum_probs=41.1
Q ss_pred HHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEec
Q 035739 166 MEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYS 230 (335)
Q Consensus 166 L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~ 230 (335)
++.+++.|++. .|. .+...+++......+++--...+ .....+..+|+++||+++-+.
T Consensus 3 ~~~~~kagk~~-~G~-----~~v~kai~~gkaklViiA~D~~~-~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 3 YDKVSQAKSII-IGT-----KQTVKALKRGSVKEVVVAKDADP-ILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp HHHHHHCSEEE-ESH-----HHHHHHHTTTCEEEEEEETTSCH-HHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHcCCee-EcH-----HHHHHHHHcCCeeEEEEeCCCCH-HHHHHHHHHHHHcCCCEEEEC
Confidence 56778888864 343 66777777766556666666666 344678889999999998864
No 99
>1vpq_A Hypothetical protein TM1631; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.1.32.1
Probab=50.65 E-value=93 Score=26.98 Aligned_cols=69 Identities=14% Similarity=0.313 Sum_probs=46.1
Q ss_pred CCCEeeC-CCCcC--CHHHHHHHHHHHHHcCCCCCCCceEEeeccCCC-----C---CChhhHHHHHHHHHHHh--CCCc
Q 035739 62 GYRHFDT-AAMYG--TEKALGEAIAEALRLGLVSSREQLFITSKLWCQ-----N---AHRDHVIPALKKSLSAL--QMEY 128 (335)
Q Consensus 62 Gin~~Dt-A~~Yg--se~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~-----~---~~~~~i~~~~e~sL~~L--g~d~ 128 (335)
-.|.+.. +..|+ +++.+.++.++ ..+++..+.|+... . ...+...+.+-++++.| | ++
T Consensus 49 ~F~tVEiNsTFY~~p~~~t~~~W~~~--------tP~~F~F~vKa~r~iTh~~~~~~~~~~~~~~~F~~~~~pL~~~-~k 119 (273)
T 1vpq_A 49 GFRIVELNFTYYTQPSWRSFVQMLRK--------TPPDFYFTVKTPGSVTHVLWKEGKDPKEDMENFTRQIEPLIEE-QR 119 (273)
T ss_dssp CCCEEEECCCSSSSSCHHHHHHHHTT--------SCTTCEEEEECCHHHHHTHHHHTCCSHHHHHHHHHHHHHHHHT-TC
T ss_pred CCCeEEECccccCCCCHHHHHHHHHh--------CCCCeEEEEEeChhhcccccccccchHHHHHHHHHHHHhhccC-CC
Confidence 5777655 44788 78888888764 46889999998521 1 11123344555677778 7 88
Q ss_pred cceEEeecCCC
Q 035739 129 LDLYLVHWPIS 139 (335)
Q Consensus 129 iDl~~lH~p~~ 139 (335)
+..+++--|..
T Consensus 120 LG~vL~Q~Pps 130 (273)
T 1vpq_A 120 LKMTLAQFPFS 130 (273)
T ss_dssp EEEEEEECCTT
T ss_pred EEEEEEEcCCC
Confidence 89888888744
No 100
>3ec1_A YQEH GTPase; atnos1, atnoa1, trap, PVHL, hydrolase, signaling protein; HET: GDP; 2.36A {Geobacillus stearothermophilus}
Probab=50.43 E-value=1.1e+02 Score=27.66 Aligned_cols=121 Identities=17% Similarity=0.165 Sum_probs=75.8
Q ss_pred ChHHHHHHHHHHHHcC---CCEeeCCCCcCC-HHHHHHHHHHHHHcCCCCCCCceEEeeccCC--CCCChhhHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKLG---YRHFDTAAMYGT-EKALGEAIAEALRLGLVSSREQLFITSKLWC--QNAHRDHVIPALKKS 120 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~G---in~~DtA~~Ygs-e~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~--~~~~~~~i~~~~e~s 120 (335)
+.++..+++...++.- +-.+|.++..++ ...+-+.+. .+.-++|.+|+-. .....+.+.+.+.+.
T Consensus 57 ~~e~f~~~L~~~~~~~~lil~VvD~~d~~~s~~~~l~~~l~---------~~piilV~NK~DLl~~~~~~~~~~~~l~~~ 127 (369)
T 3ec1_A 57 DDDDFLSMLHRIGESKALVVNIVDIFDFNGSFIPGLPRFAA---------DNPILLVGNKADLLPRSVKYPKLLRWMRRM 127 (369)
T ss_dssp --CHHHHHHHHHHHHCCEEEEEEETTCSGGGCCSSHHHHCT---------TSCEEEEEECGGGSCTTCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhccCcEEEEEEECCCCCCchhhHHHHHhC---------CCCEEEEEEChhcCCCccCHHHHHHHHHHH
Confidence 4556777887775432 446788776541 111122221 4566889999842 222345677777777
Q ss_pred HHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCccHHH-HHHHHH
Q 035739 121 LSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSRKK-IETILT 193 (335)
Q Consensus 121 L~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~-l~~~~~ 193 (335)
++.+|....+++.+..-. .....++++.+.++.+...|-.+|-+|.+-.. +..+..
T Consensus 128 ~~~~g~~~~~v~~iSA~~-----------------g~gi~~L~~~I~~~~~~~~i~~vG~~nvGKStliN~L~~ 184 (369)
T 3ec1_A 128 AEELGLCPVDVCLVSAAK-----------------GIGMAKVMEAINRYREGGDVYVVGCTNVGKSTFINRIIE 184 (369)
T ss_dssp HHTTTCCCSEEEECBTTT-----------------TBTHHHHHHHHHHHHTTSCEEEECCTTSSHHHHHHHHHH
T ss_pred HHHcCCCcccEEEEECCC-----------------CCCHHHHHHHHHhhcccCcEEEEcCCCCchHHHHHHHHh
Confidence 888886545666655332 12378899999998888889999999998554 444444
No 101
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=50.39 E-value=99 Score=25.53 Aligned_cols=74 Identities=14% Similarity=0.029 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhc--CCCCccccCCCCcccc---cHHHHHHHHHcCCeEEEeccC
Q 035739 159 YRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFA--TIPPSINQVEMHPVWQ---QRKLIEFCKAKGIIVTAYSPL 232 (335)
Q Consensus 159 ~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~--~~~~~~~q~~~~~~~~---~~~~l~~~~~~gi~v~a~~pl 232 (335)
.+++++...+-.++.-|++|=|.+.+......+++.. ++-.+..+..|.-... ..+..+..++.|+.|+...=+
T Consensus 36 T~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~~~~~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~tH~ 114 (206)
T 1t57_A 36 TERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEGNIVSVTHHAGFREKGQLELEDEARDALLERGVNVYAGSHA 114 (206)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCSEEEEECCCTTSSSTTCCSSCHHHHHHHHHHTCEEECCSCT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHccCCEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEeecc
Confidence 5566665444444445999999999877777777744 2212223333322211 278999999999999875433
No 102
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=50.11 E-value=1.4e+02 Score=26.79 Aligned_cols=135 Identities=16% Similarity=0.157 Sum_probs=65.6
Q ss_pred CCChHHHHHHH-------HHHHHcCCCEeeC-------------------CCCcC-C-H---HHHHHHHHHHHHcCCCCC
Q 035739 45 KSDTDALKLVV-------LEAIKLGYRHFDT-------------------AAMYG-T-E---KALGEAIAEALRLGLVSS 93 (335)
Q Consensus 45 ~~~~~~~~~~l-------~~A~~~Gin~~Dt-------------------A~~Yg-s-e---~~lG~~l~~~~~~g~~~~ 93 (335)
..+.++..+++ ++|.++|+..++- .+.|| + | +++-+.++.. .+.+
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aV-r~av--- 222 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAV-REVW--- 222 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHH-HTTS---
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHH-HHHc---
Confidence 34556555544 4567889887763 24577 3 2 1233333332 1222
Q ss_pred CCceEEeeccCCCCCCh---hhHH--HHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 035739 94 REQLFITSKLWCQNAHR---DHVI--PALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEE 168 (335)
Q Consensus 94 R~~~~i~tK~~~~~~~~---~~i~--~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 168 (335)
-+++-|..|+...+... ..+. ..+-+.|+..|+|||++-. ...... ...+ .... ..++.+..
T Consensus 223 g~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~---g~~~~~--~~~~-----~~~~---~~~~~~~~ 289 (363)
T 3l5l_A 223 PENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSV---GFTIPD--TNIP-----WGPA---FMGPIAER 289 (363)
T ss_dssp CTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEE---CCCSSC--CCCC-----CCTT---TTHHHHHH
T ss_pred CCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEec---Cccccc--cccC-----CCcc---hhHHHHHH
Confidence 34566778886433211 1122 2344557778877766543 211000 0000 0000 01233444
Q ss_pred HHHcCCccEEEecCc-cHHHHHHHHHhcC
Q 035739 169 SQMLGLTKSIGLSNF-SRKKIETILTFAT 196 (335)
Q Consensus 169 l~~~Gkir~iGvs~~-~~~~l~~~~~~~~ 196 (335)
+++.=++--+++..+ +++.++++++...
T Consensus 290 ir~~~~iPVi~~GgI~s~e~a~~~l~~G~ 318 (363)
T 3l5l_A 290 VRREAKLPVTSAWGFGTPQLAEAALQANQ 318 (363)
T ss_dssp HHHHHTCCEEECSSTTSHHHHHHHHHTTS
T ss_pred HHHHcCCcEEEeCCCCCHHHHHHHHHCCC
Confidence 444435666777776 5777888777543
No 103
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=49.92 E-value=45 Score=31.62 Aligned_cols=107 Identities=14% Similarity=0.104 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCC-ChhhH----------HHHHHHHHHHhCCCccceEEeecCCCCCCC
Q 035739 75 EKALGEAIAEALRLGLVSSREQLFITSKLWCQNA-HRDHV----------IPALKKSLSALQMEYLDLYLVHWPISSKPG 143 (335)
Q Consensus 75 e~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~-~~~~i----------~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~ 143 (335)
-+.+..+-++.+- +- -+..+||++-++.-.. .|... .-.-.+.-+|+.+.|+|-+.=
T Consensus 145 yeT~~~~~rk~~g-g~--L~G~~~lTaGLGGMgGAQplA~~mag~v~i~~Evd~~ri~~R~~~gyld~~~~--------- 212 (551)
T 1x87_A 145 YETFAEVARQHFG-GT--LAGTITLTAGLGGMGGAQPLAVTMNGGVCLAIEVDPARIQRRIDTNYLDTMTD--------- 212 (551)
T ss_dssp HHHHHHHHHHHST-TC--CTTCEEEEECCSTTGGGHHHHHHHTTCEEEEEESCHHHHHHHHHTTSCSEEES---------
T ss_pred HHHHHHHHHHhcC-CC--CCceEEEEecCCccchhhHHHHHHcCceEEEEEECHHHHHHHHhCCCceeEcC---------
Confidence 3444444454432 22 5888999998864211 00000 001123346777889887432
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcC-CCCccccCCCC
Q 035739 144 ELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFAT-IPPSINQVEMH 207 (335)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~-~~~~~~q~~~~ 207 (335)
+++++++.+++.+++|+...||+-..-++.++++++..- +++..-|...+
T Consensus 213 --------------~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtDQTSaH 263 (551)
T 1x87_A 213 --------------SLDAALEMAKQAKEEKKALSIGLVGNAAEVLPRLVETGFVPDVLTDQTSAH 263 (551)
T ss_dssp --------------CHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHTTCCCSEECCCSCTT
T ss_pred --------------CHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCCCcccc
Confidence 288999999999999999999999998899999988632 34456777654
No 104
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=49.89 E-value=1.3e+02 Score=26.34 Aligned_cols=51 Identities=12% Similarity=0.257 Sum_probs=31.5
Q ss_pred ccHHHHHHHHHhcCCCCccccCCCCccc------ccHHHHHHHHHcCCeEEEeccCC
Q 035739 183 FSRKKIETILTFATIPPSINQVEMHPVW------QQRKLIEFCKAKGIIVTAYSPLG 233 (335)
Q Consensus 183 ~~~~~l~~~~~~~~~~~~~~q~~~~~~~------~~~~~l~~~~~~gi~v~a~~pl~ 233 (335)
.+.+.++++++..+.+.+++..+-|+.- .-.++.++|+++|+.++.=...+
T Consensus 147 ~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 203 (391)
T 3dzz_A 147 VNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHG 203 (391)
T ss_dssp CCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred ecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccc
Confidence 5677888877633333233323333321 12678899999999998876665
No 105
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=49.80 E-value=1.5e+02 Score=26.87 Aligned_cols=153 Identities=10% Similarity=0.125 Sum_probs=90.6
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCCHH--HHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHh
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGTEK--ALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSAL 124 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~--~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~L 124 (335)
+.++..+.++.+++.|++.|-.=-....+. ..=+++++. --+++-|...... ..+.+... +.++.|
T Consensus 142 ~~e~~~~~a~~~~~~Gf~~~KlK~g~~~~~d~~~v~avR~a-------~g~~~~L~vDaN~-~w~~~~A~----~~~~~l 209 (379)
T 3r0u_A 142 NVAETIQNIQNGVEANFTAIKVKTGADFNRDIQLLKALDNE-------FSKNIKFRFDANQ-GWNLAQTK----QFIEEI 209 (379)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHH-------CCTTSEEEEECTT-CCCHHHHH----HHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEeeecCCCHHHHHHHHHHHHHh-------cCCCCeEEEeCCC-CcCHHHHH----HHHHHH
Confidence 567777788888999999986533222122 222455553 2344555555432 23333322 233344
Q ss_pred CCCc-cceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCccc
Q 035739 125 QMEY-LDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSIN 202 (335)
Q Consensus 125 g~d~-iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~ 202 (335)
. +| .++.++..|... +-++.+.++++.-.+. ..|=+-++..++.++++.... .++
T Consensus 210 ~-~~~~~l~~iEeP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~--d~v 266 (379)
T 3r0u_A 210 N-KYSLNVEIIEQPVKY--------------------YDIKAMAEITKFSNIPVVADESVFDAKDAERVIDEQAC--NMI 266 (379)
T ss_dssp H-TSCCCEEEEECCSCT--------------------TCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCC--SEE
T ss_pred h-hcCCCcEEEECCCCc--------------------ccHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCC--CEE
Confidence 3 22 567778877431 1245666777654444 566777888899998885543 355
Q ss_pred cCCCCcc---cccHHHHHHHHHcCCeEEEeccCCC
Q 035739 203 QVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 203 q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
|+...-+ ..-.++..+|+++|+.++..+.+.+
T Consensus 267 ~~k~~~~GGi~~~~~ia~~A~~~gi~~~~~~~~es 301 (379)
T 3r0u_A 267 NIKLAKTGGILEAQKIKKLADSAGISCMVGCMMES 301 (379)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHTTCEEEECCCSCC
T ss_pred EECccccCCHHHHHHHHHHHHHcCCEEEEeCCCcc
Confidence 5543332 1226789999999999998766543
No 106
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=49.20 E-value=1.5e+02 Score=26.80 Aligned_cols=150 Identities=11% Similarity=0.016 Sum_probs=84.6
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCC---HHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGT---EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 123 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygs---e~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~ 123 (335)
+.++..+..+++.+.|++.|..=-.-++ ...+=+++++.+ -+++-|..... ..++.+...+-++. |+.
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~-------g~~~~l~vDan-~~~~~~~a~~~~~~-l~~ 235 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEI-------GKDAQLAVDAN-GRFNLETGIAYAKM-LRD 235 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHH-------TTTCEEEEECT-TCCCHHHHHHHHHH-HTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhc-------CCCCeEEEECC-CCCCHHHHHHHHHH-HHH
Confidence 5677777788888999998863211122 111123444431 23455555553 23444444433333 555
Q ss_pred hCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEE-ecCccHHHHHHHHHhcCC--CCc
Q 035739 124 LQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIG-LSNFSRKKIETILTFATI--PPS 200 (335)
Q Consensus 124 Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iG-vs~~~~~~l~~~~~~~~~--~~~ 200 (335)
++++ ++..|... +-++.+.++++.-.|--.+ =+-++...+.++++.... ...
T Consensus 236 ~~i~-----~iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d 290 (392)
T 1tzz_A 236 YPLF-----WYEEVGDP--------------------LDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRD 290 (392)
T ss_dssp SCCS-----EEECCSCT--------------------TCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTC
T ss_pred cCCC-----eecCCCCh--------------------hhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCc
Confidence 5544 45555321 2356777777765665444 344568889999886611 134
Q ss_pred cccCCCCcc---cccHHHHHHHHHcCCe---EEEec
Q 035739 201 INQVEMHPV---WQQRKLIEFCKAKGII---VTAYS 230 (335)
Q Consensus 201 ~~q~~~~~~---~~~~~~l~~~~~~gi~---v~a~~ 230 (335)
++|+..+-+ ..-.++..+|+++|+. ++..+
T Consensus 291 ~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~~~ 326 (392)
T 1tzz_A 291 WLQFDCALSYGLCEYQRTLEVLKTHGWSPSRCIPHG 326 (392)
T ss_dssp EECCCTTTTTCHHHHHHHHHHHHHTTCCGGGBCCSC
T ss_pred EEEECccccCCHHHHHHHHHHHHHCCCCCceEeecH
Confidence 566554433 2226789999999998 77653
No 107
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=49.11 E-value=57 Score=28.90 Aligned_cols=120 Identities=15% Similarity=0.041 Sum_probs=66.0
Q ss_pred CCHHHHHHHHHHHHHcCCccEEEecCcc-----HHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEecc
Q 035739 157 MDYRGVWEAMEESQMLGLTKSIGLSNFS-----RKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSP 231 (335)
Q Consensus 157 ~~~~~~~~~L~~l~~~Gkir~iGvs~~~-----~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~p 231 (335)
+..+++.+.++++++.| ++.|-++.-. .+.+.++++...-. -..+..+......+.++..++.|+..+..+.
T Consensus 84 ls~eei~~~i~~~~~~g-~~~i~~~gGe~p~~~~~~~~~li~~i~~~--~~~i~~s~g~l~~e~l~~L~~ag~~~v~i~l 160 (348)
T 3iix_A 84 MTPEEIVERARLAVQFG-AKTIVLQSGEDPYXMPDVISDIVKEIKKM--GVAVTLSLGEWPREYYEKWKEAGADRYLLRH 160 (348)
T ss_dssp CCHHHHHHHHHHHHHTT-CSEEEEEESCCGGGTTHHHHHHHHHHHTT--SCEEEEECCCCCHHHHHHHHHHTCCEEECCC
T ss_pred CCHHHHHHHHHHHHHCC-CCEEEEEeCCCCCccHHHHHHHHHHHHhc--CceEEEecCCCCHHHHHHHHHhCCCEEeeee
Confidence 45889999999999887 5555554332 24555665543211 1111223333357888999999987666322
Q ss_pred CCCCCCcCCCCccCChHHHHHHHHHhCCCHH--HHHHHHHhhcC----CEEEeCC--CCHHHHHHhhcc
Q 035739 232 LGAVGKIYGSNQVLENEALKEIAKARGKTVA--QVSLRWIVEQG----ATVVIKS--LNLERMKQNLGI 292 (335)
Q Consensus 232 l~~~G~l~~~~~~~~~~~l~~la~~~g~s~~--q~al~~~l~~~----~~vi~g~--~~~~~l~enl~a 292 (335)
=+ ...+....+.... +.. --+++++...| ..+++|. .+.+++.+.+..
T Consensus 161 et-----------~~~~~~~~i~~~~--~~~~~~~~i~~~~~~Gi~v~~~~i~G~p~et~e~~~~~~~~ 216 (348)
T 3iix_A 161 ET-----------ANPVLHRKLRPDT--SFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLF 216 (348)
T ss_dssp BC-----------SCHHHHHHHSTTS--CHHHHHHHHHHHHHTTCEEEECBEESCTTCCHHHHHHHHHH
T ss_pred ee-----------CCHHHHHHhCCCc--CHHHHHHHHHHHHHhCCeeccceEEeCCCCCHHHHHHHHHH
Confidence 21 1223333333222 322 23455666555 4456776 577777765543
No 108
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=48.91 E-value=45 Score=31.63 Aligned_cols=128 Identities=16% Similarity=0.073 Sum_probs=82.7
Q ss_pred HHHHHHHcCCCEe--eCCCCcC----------CHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCC-ChhhH-------
Q 035739 54 VVLEAIKLGYRHF--DTAAMYG----------TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNA-HRDHV------- 113 (335)
Q Consensus 54 ~l~~A~~~Gin~~--DtA~~Yg----------se~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~-~~~~i------- 113 (335)
-+++.-+.|+..+ =||-.|- +-+.+..+-++.+- +- -+..+||++-++.-.. .|...
T Consensus 117 ~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~g-g~--L~G~~~lTaGLGGMgGAQplA~~mag~v~ 193 (557)
T 1uwk_A 117 HFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYG-GS--LKGKWVLTAGLGGMGGAQPLAATLAGACS 193 (557)
T ss_dssp HHHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHTS-SC--CTTCEEEEECCSTTTTHHHHHHHHTTCEE
T ss_pred HHHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcC-CC--CCceEEEEecCCccchhhHHHHHHcCceE
Confidence 4466678898865 3555442 33444455555432 22 5888999998864211 00000
Q ss_pred ---HHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCccHHHHHH
Q 035739 114 ---IPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSRKKIET 190 (335)
Q Consensus 114 ---~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~ 190 (335)
.-.-.+.-+|+.+.|+|-+. .+++++++.+++.+++|+...||+-..-++.+++
T Consensus 194 i~~Evd~~ri~~R~~~gyld~~~-----------------------~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~ 250 (557)
T 1uwk_A 194 LNIESQQSRIDFRLETRYVDEQA-----------------------TDLDDALVRIAKYTAEGKAISIALHGNAAEILPE 250 (557)
T ss_dssp EEEESCHHHHHHHHHTTSCCEEC-----------------------SSHHHHHHHHHHHHHTTCCCEEEEESCHHHHHHH
T ss_pred EEEEECHHHHHHHHhCCCceeEc-----------------------CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHH
Confidence 00112334677788988642 2288999999999999999999999998999999
Q ss_pred HHHhcC-CCCccccCCCC
Q 035739 191 ILTFAT-IPPSINQVEMH 207 (335)
Q Consensus 191 ~~~~~~-~~~~~~q~~~~ 207 (335)
+++..- +++..-|...+
T Consensus 251 l~~~~i~~DlvtDQTSaH 268 (557)
T 1uwk_A 251 LVKRGVRPDMVTDQTSAH 268 (557)
T ss_dssp HHHHTCCCSEECCCSCTT
T ss_pred HHHCCCCCCCCCCCcccc
Confidence 988742 44456777654
No 109
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=48.65 E-value=68 Score=28.84 Aligned_cols=152 Identities=12% Similarity=0.109 Sum_probs=86.6
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcC--CHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHh
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYG--TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSAL 124 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg--se~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~L 124 (335)
+.++..+..+.+++.|++.|..=-.-. .+...=+++++.+ -+++-|...... ..+.+... .+-+.|+.+
T Consensus 140 ~~~~~~~~a~~~~~~G~~~~K~K~G~~~~~d~~~v~avR~~~-------g~~~~l~vDan~-~~~~~~a~-~~~~~l~~~ 210 (356)
T 3ro6_B 140 PVEETLAEAREHLALGFRVLKVKLCGDEEQDFERLRRLHETL-------AGRAVVRVDPNQ-SYDRDGLL-RLDRLVQEL 210 (356)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHHHHH-------TTSSEEEEECTT-CCCHHHHH-HHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHHh-------CCCCEEEEeCCC-CCCHHHHH-HHHHHHHhc
Confidence 567777788888999999987532222 1112224555542 234556666532 33343332 233556667
Q ss_pred CCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhc-CCCCccc
Q 035739 125 QMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFA-TIPPSIN 202 (335)
Q Consensus 125 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~-~~~~~~~ 202 (335)
++++| ..|... +-++.+.++++.-.|. ..|=+-++..++.++++.. .. .++
T Consensus 211 ~i~~i-----EqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~--d~v 263 (356)
T 3ro6_B 211 GIEFI-----EQPFPA--------------------GRTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAAC--GIF 263 (356)
T ss_dssp TCCCE-----ECCSCT--------------------TCHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSC--SEE
T ss_pred CCCEE-----ECCCCC--------------------CcHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcC--CEE
Confidence 66554 445321 1244555555443343 4555667788888888754 33 455
Q ss_pred cCCCCcc---cccHHHHHHHHHcCCeEEEeccCCC
Q 035739 203 QVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 203 q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
|+...-+ ..-.++..+|+++|+.++..+.+.+
T Consensus 264 ~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~~~es 298 (356)
T 3ro6_B 264 NIKLMKCGGLAPARRIATIAETAGIDLMWGCMDES 298 (356)
T ss_dssp EECHHHHCSHHHHHHHHHHHHHHTCEEEECCCSCC
T ss_pred EEcccccCCHHHHHHHHHHHHHcCCEEEecCCccc
Confidence 5543322 1226789999999999988665543
No 110
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=48.01 E-value=45 Score=31.63 Aligned_cols=128 Identities=20% Similarity=0.142 Sum_probs=82.6
Q ss_pred HHHHHHHcCCCEe--eCCCCcC----------CHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCC-ChhhH-------
Q 035739 54 VVLEAIKLGYRHF--DTAAMYG----------TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNA-HRDHV------- 113 (335)
Q Consensus 54 ~l~~A~~~Gin~~--DtA~~Yg----------se~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~-~~~~i------- 113 (335)
-+++.-+.|+..+ =||-.|- +-+.+..+-++.+- +- -+..+||++-++.-.. .|...
T Consensus 113 ~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~g-g~--L~G~~~lTaGLGGMgGAQplA~~mag~v~ 189 (552)
T 2fkn_A 113 HFHELEKKGLMMYGQMTAGSWIYIGSQGILQGTYETFAELARQHFG-GS--LKGTLTLTAGLGGMGGAQPLSVTMNEGVV 189 (552)
T ss_dssp HHHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHSS-SC--CTTCEEEEECCSTTTTHHHHHHHHTTCEE
T ss_pred HHHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcC-CC--CCceEEEEecCCccchhhHHHHHHcCceE
Confidence 4466678898865 3555442 33444445455432 22 5888999998864211 00000
Q ss_pred ---HHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCccHHHHHH
Q 035739 114 ---IPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSRKKIET 190 (335)
Q Consensus 114 ---~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~ 190 (335)
.-.-.+.-+|+.+.|+|-+.= +++++++.+++.+++|+...||+-..-++.+++
T Consensus 190 i~~Evd~~ri~~R~~~gyld~~~~-----------------------~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~ 246 (552)
T 2fkn_A 190 IAVEVDEKRIDKRIETKYCDRKTA-----------------------SIEEALAWAEEAKLAGKPLSIALLGNAAEVHHT 246 (552)
T ss_dssp EEEESCHHHHHHHHHTTSCSEEES-----------------------CHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHH
T ss_pred EEEEECHHHHHHHHhCCcceeEcC-----------------------CHHHHHHHHHHHHHcCCceEEEEeccHHHHHHH
Confidence 001233346788889887432 288999999999999999999999998898999
Q ss_pred HHHhcC-CCCccccCCCC
Q 035739 191 ILTFAT-IPPSINQVEMH 207 (335)
Q Consensus 191 ~~~~~~-~~~~~~q~~~~ 207 (335)
+++..- +++..-|...+
T Consensus 247 l~~~~i~~DlvtDQTSaH 264 (552)
T 2fkn_A 247 LLNRGVKIDIVTDQTSAH 264 (552)
T ss_dssp HHTTTCCCSEECCCSCTT
T ss_pred HHHCCCCCCCCCCCcccc
Confidence 988632 34456777654
No 111
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=47.92 E-value=1.5e+02 Score=26.80 Aligned_cols=147 Identities=16% Similarity=0.186 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHcCCCEeeCCC-CcC-C-HH--HHHHHHHHHHHcCCCCCCCceEEeeccCCCCCC-hhhHHHHHHHHHH
Q 035739 49 DALKLVVLEAIKLGYRHFDTAA-MYG-T-EK--ALGEAIAEALRLGLVSSREQLFITSKLWCQNAH-RDHVIPALKKSLS 122 (335)
Q Consensus 49 ~~~~~~l~~A~~~Gin~~DtA~-~Yg-s-e~--~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~-~~~i~~~~e~sL~ 122 (335)
++..+..+.+++.|++.|..=- .+| + +. ..=+++|+. --+++-|...... ..+ .+...+ +-+.|+
T Consensus 148 e~~~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a-------~g~~~~l~vDan~-~~~d~~~A~~-~~~~l~ 218 (374)
T 3sjn_A 148 EDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREA-------AGPEMEVQIDLAS-KWHTCGHSAM-MAKRLE 218 (374)
T ss_dssp GGGHHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHH-------HCSSSEEEEECTT-TTCSHHHHHH-HHHHSG
T ss_pred HHHHHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHH-------hCCCCeEEEECCC-CCCCHHHHHH-HHHHhh
Confidence 6677788888999999987532 232 2 21 122445553 1244556556532 233 333222 223445
Q ss_pred HhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCcc
Q 035739 123 ALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSI 201 (335)
Q Consensus 123 ~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~ 201 (335)
.+++ .++..|... +-++.+.++++.-.|. ..|=+-++..++.++++.... .+
T Consensus 219 ~~~i-----~~iEqP~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~--d~ 271 (374)
T 3sjn_A 219 EFNL-----NWIEEPVLA--------------------DSLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNA--DI 271 (374)
T ss_dssp GGCC-----SEEECSSCT--------------------TCHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCC--SE
T ss_pred hcCc-----eEEECCCCc--------------------ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCC--CE
Confidence 5554 445555321 1246677777765554 444556678888888886554 46
Q ss_pred ccCCCCcc---cccHHHHHHHHHcCCeEEEecc
Q 035739 202 NQVEMHPV---WQQRKLIEFCKAKGIIVTAYSP 231 (335)
Q Consensus 202 ~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~p 231 (335)
+|+...-+ ..-.++..+|+++|+.++..+.
T Consensus 272 v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 304 (374)
T 3sjn_A 272 VQPDITRCGGITEMKKIYDIAQMNGTQLIPHGF 304 (374)
T ss_dssp ECCBTTTSSHHHHHHHHHHHHHHHTCEECCBCC
T ss_pred EEeCccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 66655543 2226789999999999987655
No 112
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=47.69 E-value=1.4e+02 Score=25.93 Aligned_cols=123 Identities=14% Similarity=0.134 Sum_probs=66.1
Q ss_pred CCHHHHHHHHHHHHHcCCccEEEecC-----ccH-----HHHHHHHHhcC-C-CC-ccccCCCCcccccHHHHHHHHHcC
Q 035739 157 MDYRGVWEAMEESQMLGLTKSIGLSN-----FSR-----KKIETILTFAT-I-PP-SINQVEMHPVWQQRKLIEFCKAKG 223 (335)
Q Consensus 157 ~~~~~~~~~L~~l~~~Gkir~iGvs~-----~~~-----~~l~~~~~~~~-~-~~-~~~q~~~~~~~~~~~~l~~~~~~g 223 (335)
...+++++.++.+.+.|. +.|-+.. +.. ..+.++++... . .. .+.....++..-..++++..++.|
T Consensus 33 r~~e~i~~ei~~l~~~G~-~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l~~~~gi~~ir~~~~~p~~l~~e~l~~l~~~g 111 (304)
T 2qgq_A 33 RSIEDITREVEDLLKEGK-KEIILVAQDTTSYGIDLYRKQALPDLLRRLNSLNGEFWIRVMYLHPDHLTEEIISAMLELD 111 (304)
T ss_dssp CCHHHHHHHHHHHHHTTC-CEEEEECTTGGGTTHHHHSSCCHHHHHHHHHTSSSSCEEEECCCCGGGCCHHHHHHHHHCT
T ss_pred eCHHHHHHHHHHHHHCCC-cEEEEEeEcccccCCCCCcHHHHHHHHHHHHhcCCCcEEEEeeeecccCCHHHHHHHHhCC
Confidence 458899999999999873 5554421 211 23444444321 1 11 111123455444678999999988
Q ss_pred --CeEEEeccCCCCCCcCCCCccCChHHHHHHHHHhCCCHHH--HHHHHHhh--cC----CEEEeCC--CCHHHHHHhhc
Q 035739 224 --IIVTAYSPLGAVGKIYGSNQVLENEALKEIAKARGKTVAQ--VSLRWIVE--QG----ATVVIKS--LNLERMKQNLG 291 (335)
Q Consensus 224 --i~v~a~~pl~~~G~l~~~~~~~~~~~l~~la~~~g~s~~q--~al~~~l~--~~----~~vi~g~--~~~~~l~enl~ 291 (335)
+..+..+.-+. ..+.++.+.+. .+..+ -+++.+.. .+ +..|+|. .+.+++.+.++
T Consensus 112 ~~~~~l~i~lqs~-----------s~~vl~~m~r~--~t~e~~~~~i~~l~~~~~gi~i~~~~IvG~PgEt~ed~~~t~~ 178 (304)
T 2qgq_A 112 KVVKYFDVPVQHG-----------SDKILKLMGRT--KSSEELKKMLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQ 178 (304)
T ss_dssp TBCCEEECCCBCS-----------CHHHHHHTTCC--SCHHHHHHHHHHHHHHCTTCEEEEEEEECCTTCCHHHHHHHHH
T ss_pred CCccEEEEecccC-----------CHHHHHHhCCC--CCHHHHHHHHHHHHhhCCCCEEEEEEEEeCCCCCHHHHHHHHH
Confidence 55554332221 33445554332 33332 34555555 33 3567775 47777777766
Q ss_pred cc
Q 035739 292 IF 293 (335)
Q Consensus 292 a~ 293 (335)
.+
T Consensus 179 ~l 180 (304)
T 2qgq_A 179 FV 180 (304)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 113
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=47.19 E-value=16 Score=23.78 Aligned_cols=20 Identities=20% Similarity=0.205 Sum_probs=17.8
Q ss_pred CHHHHHHHHHHHHHcCCccE
Q 035739 158 DYRGVWEAMEESQMLGLTKS 177 (335)
Q Consensus 158 ~~~~~~~~L~~l~~~Gkir~ 177 (335)
+.++++.+|.+|.++|.|+-
T Consensus 38 ~kdeV~~~LrrLe~KGLI~l 57 (59)
T 2xvc_A 38 EKQEVVKLLEALKNKGLIAV 57 (59)
T ss_dssp CHHHHHHHHHHHHHTTSEEE
T ss_pred CHHHHHHHHHHHHHCCCeec
Confidence 37899999999999999973
No 114
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=46.06 E-value=1.7e+02 Score=26.46 Aligned_cols=151 Identities=13% Similarity=0.039 Sum_probs=87.2
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCC
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQM 126 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~ 126 (335)
+.++..+..+++.+.|++.|..=-.-++-+..-+.++.. ++.+ -+++-|..... ..++.+...+-++. |+..|
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~av-R~a~---G~~~~l~vDan-~~~~~~~a~~~~~~-l~~~g- 217 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELL-KTCV---PAGSKVMIDPN-EAWTSKEALTKLVA-IREAG- 217 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHH-HTTS---CTTCEEEEECT-TCBCHHHHHHHHHH-HHHTT-
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHH-HHhh---CCCCeEEEECC-CCCCHHHHHHHHHH-HHhcC-
Confidence 567777888888999999987422112211112233321 1121 24566665653 23445554444433 66622
Q ss_pred CccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC-CccEEEecCccHHHHHHHHHhcCCCCccccCC
Q 035739 127 EYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLG-LTKSIGLSNFSRKKIETILTFATIPPSINQVE 205 (335)
Q Consensus 127 d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~G-kir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~ 205 (335)
.++.++..|... +-++.+.++++.- .|--.+--+.+.+.+.++++.... .++|+.
T Consensus 218 --~~i~~iEqP~~~--------------------~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~~~--d~v~ik 273 (389)
T 2oz8_A 218 --HDLLWVEDPILR--------------------HDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAHAA--DILNVH 273 (389)
T ss_dssp --CCCSEEESCBCT--------------------TCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTTCC--SEEEEC
T ss_pred --CCceEEeCCCCC--------------------cCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcCCC--CEEEEC
Confidence 234456655321 2356777777764 565444433378888998886544 466666
Q ss_pred CCcccccHHHHHHHHHcCCeEEEe
Q 035739 206 MHPVWQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 206 ~~~~~~~~~~l~~~~~~gi~v~a~ 229 (335)
.-+..-.++..+|+++|+.++..
T Consensus 274 -GGit~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 274 -GQVTDVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp -SCHHHHHHHHHHHHHHTCCEEEC
T ss_pred -cCHHHHHHHHHHHHHcCCeEeec
Confidence 33333368899999999999987
No 115
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=45.92 E-value=1.8e+02 Score=26.60 Aligned_cols=148 Identities=16% Similarity=0.134 Sum_probs=87.4
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCC--CcC-------CHH------HHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChh
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAA--MYG-------TEK------ALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRD 111 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~--~Yg-------se~------~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~ 111 (335)
+.++..+..+.+++.|++.|..=. .|+ +.. ..=+++|+. --+++-|...... ..+.+
T Consensus 151 ~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a-------~G~d~~l~vDan~-~~~~~ 222 (404)
T 4e5t_A 151 DADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAA-------VGTKADLLFGTHG-QFTVS 222 (404)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHH-------HGGGSEEEECCCS-CBCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHH-------cCCCCeEEEeCCC-CcCHH
Confidence 567778888889999999997632 111 111 122345543 2345666666532 23333
Q ss_pred hHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHH
Q 035739 112 HVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIET 190 (335)
Q Consensus 112 ~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~ 190 (335)
...+ +-+.|+.++++ ++..|... +-++.+.++++.-.|. ..|=+-++..++.+
T Consensus 223 ~A~~-~~~~l~~~~i~-----~iEeP~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ 276 (404)
T 4e5t_A 223 GAKR-LARRLEAYDPL-----WFEEPIPP--------------------EKPEDMAEVARYTSIPVATGERLCTKYEFSR 276 (404)
T ss_dssp HHHH-HHHHHGGGCCS-----EEECCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCHHHHHHH
T ss_pred HHHH-HHHHHhhcCCc-----EEECCCCc--------------------ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHH
Confidence 3322 23455666544 45555321 1245677777765555 34445667888888
Q ss_pred HHHhcCCCCccccCCCCcc---cccHHHHHHHHHcCCeEEEec
Q 035739 191 ILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYS 230 (335)
Q Consensus 191 ~~~~~~~~~~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~ 230 (335)
+++.... .++|+...-+ ..-.++...|+++|+.+..+.
T Consensus 277 ~i~~~a~--d~v~~d~~~~GGit~~~~ia~~A~~~gi~~~~h~ 317 (404)
T 4e5t_A 277 VLETGAA--SILQMNLGRVGGLLEAKKIAAMAECHSAQIAPHL 317 (404)
T ss_dssp HHHHTCC--SEECCCTTTSSCHHHHHHHHHHHHHTTCEECCCC
T ss_pred HHHhCCC--CEEecCccccCCHHHHHHHHHHHHHcCCEEeecC
Confidence 8886654 4666665543 223678999999999986653
No 116
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=45.86 E-value=70 Score=22.87 Aligned_cols=61 Identities=11% Similarity=0.080 Sum_probs=42.5
Q ss_pred HHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEe
Q 035739 162 VWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 162 ~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~ 229 (335)
+..+|.-..+.|++. .|. .+..++++......+++--.. +.+....+..+|++++|+++.+
T Consensus 3 i~~~L~la~kagk~v-~G~-----~~v~kai~~gka~lViiA~D~-~~~~~~~i~~~c~~~~ip~~~~ 63 (99)
T 3j21_Z 3 LAFELRKAMETGKVV-LGS-----NETIRLAKTGGAKLIIVAKNA-PKEIKDDIYYYAKLSDIPVYEF 63 (99)
T ss_dssp HHHHHHHHHHSSCEE-ESH-----HHHHHHHHHTCCSEEEEECCC-CHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHhCCEe-ECH-----HHHHHHHHcCCccEEEEeCCC-CHHHHHHHHHHHHHcCCCEEEe
Confidence 456777888888864 343 677778887776655555452 3333367888999999998777
No 117
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=45.82 E-value=1.4e+02 Score=27.14 Aligned_cols=146 Identities=14% Similarity=0.062 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHcCCCEeeCCCCcCCH--HHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCC
Q 035739 49 DALKLVVLEAIKLGYRHFDTAAMYGTE--KALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQM 126 (335)
Q Consensus 49 ~~~~~~l~~A~~~Gin~~DtA~~Ygse--~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~ 126 (335)
++..+..+.+++.|++.|..=-..+.+ ...=+++++.+ -+++-|..... ...+.+...+ +-+.|+.+++
T Consensus 157 e~~~~~a~~~~~~G~~~iKlK~g~~~~~d~~~v~avR~a~-------g~~~~l~vDaN-~~~~~~~A~~-~~~~L~~~~i 227 (392)
T 3ddm_A 157 ENPEDVVARKAAEGYRAFKLKVGFDDARDVRNALHVRELL-------GAATPLMADAN-QGWDLPRARQ-MAQRLGPAQL 227 (392)
T ss_dssp SSHHHHHHHHHHHTCCCEEEECSSCHHHHHHHHHHHHHHH-------CSSSCEEEECT-TCCCHHHHHH-HHHHHGGGCC
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCHHHHHHHHHHHHHhc-------CCCceEEEeCC-CCCCHHHHHH-HHHHHHHhCC
Confidence 556677788889999988753222211 12224555542 23344444542 2233333222 2345555554
Q ss_pred CccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCccccCC
Q 035739 127 EYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSINQVE 205 (335)
Q Consensus 127 d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~ 205 (335)
+ ++..|... .+ .++.+.++++.-.|. ..|=+-++..++.++++.... .++|+.
T Consensus 228 ~-----~iEeP~~~----------------~d---~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~--d~v~~k 281 (392)
T 3ddm_A 228 D-----WLEEPLRA----------------DR---PAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSL--RVMQPD 281 (392)
T ss_dssp S-----EEECCSCT----------------TS---CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCE--EEECCC
T ss_pred C-----EEECCCCc----------------cc---hHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCCC--CEEEeC
Confidence 4 45555321 01 156677777765554 455666788999998886543 466665
Q ss_pred CCcc---cccHHHHHHHHHcCCeEEEe
Q 035739 206 MHPV---WQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 206 ~~~~---~~~~~~l~~~~~~gi~v~a~ 229 (335)
..-+ ..-.++..+|+++|+.++..
T Consensus 282 ~~~~GGit~~~~ia~~A~~~gi~~~~h 308 (392)
T 3ddm_A 282 LAKWGGFSGCLPVARAVVAAGLRYCPH 308 (392)
T ss_dssp TTTTTHHHHHHHHHHHHHHTTCEECCE
T ss_pred cchhCCHHHHHHHHHHHHHcCCEEEec
Confidence 5433 22367899999999998644
No 118
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=45.47 E-value=1.6e+02 Score=26.03 Aligned_cols=151 Identities=7% Similarity=0.076 Sum_probs=86.6
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCC---HHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGT---EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 123 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygs---e~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~ 123 (335)
+.++..+..+++.+.|++.|..--.-.. .+.+ +++++. | +.-.+.| ... ..++.+...+-+ +.|+.
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~d~~~v-~avr~~---g---~~~~l~v--Dan-~~~~~~~a~~~~-~~l~~ 207 (345)
T 2zad_A 139 TVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAV-EEIAKV---T---RGAKYIV--DAN-MGYTQKEAVEFA-RAVYQ 207 (345)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHH-HHHHHH---S---TTCEEEE--ECT-TCSCHHHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCcCEEEEeecCCHHHHHHHH-HHHHhh---C---CCCeEEE--ECC-CCCCHHHHHHHH-HHHHh
Confidence 5567777788888999999864211111 1222 455553 3 3333433 332 234455554444 33677
Q ss_pred hCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEE-ecCccHHHHHHHHHhcCCCCccc
Q 035739 124 LQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIG-LSNFSRKKIETILTFATIPPSIN 202 (335)
Q Consensus 124 Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iG-vs~~~~~~l~~~~~~~~~~~~~~ 202 (335)
++++ +.++..|... +-++.+.++++.-.|--.+ =+-++.+.+.++++.... .++
T Consensus 208 ~~i~---~~~iE~P~~~--------------------~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~--d~v 262 (345)
T 2zad_A 208 KGID---IAVYEQPVRR--------------------EDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAV--DYV 262 (345)
T ss_dssp TTCC---CSEEECCSCT--------------------TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCC--SEE
T ss_pred cCCC---eeeeeCCCCc--------------------ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCC--CEE
Confidence 7655 1145655321 2356667777665555443 345578889999886654 355
Q ss_pred cCCCCc--ccccHHHHHHHHHcCCeEEEeccCC
Q 035739 203 QVEMHP--VWQQRKLIEFCKAKGIIVTAYSPLG 233 (335)
Q Consensus 203 q~~~~~--~~~~~~~l~~~~~~gi~v~a~~pl~ 233 (335)
|+..+- +..-.++...|+++|+.++..+.+.
T Consensus 263 ~ik~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 295 (345)
T 2zad_A 263 NIKLMKSGISDALAIVEIAESSGLKLMIGCMGE 295 (345)
T ss_dssp EECHHHHHHHHHHHHHHHHHTTTCEEEECCSSC
T ss_pred EEecccccHHHHHHHHHHHHHcCCeEEEecCcc
Confidence 553322 1122678899999999998876654
No 119
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=45.23 E-value=71 Score=28.80 Aligned_cols=152 Identities=15% Similarity=0.136 Sum_probs=87.0
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCC
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQM 126 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~ 126 (335)
+.++..+..+++.+.|++.|..=-. ++-+..-+.++.. ++. --+++-|..+... .++.+.. .+.++.|-
T Consensus 146 ~~~~~~~~a~~~~~~Gf~~iKik~g-~~~~~~~e~v~av-r~a---~g~~~~l~vDan~-~~~~~~a----~~~~~~l~- 214 (371)
T 2ps2_A 146 EPEDMRARVAKYRAKGYKGQSVKIS-GEPVTDAKRITAA-LAN---QQPDEFFIVDANG-KLSVETA----LRLLRLLP- 214 (371)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEECC-SCHHHHHHHHHHH-TTT---CCTTCEEEEECTT-BCCHHHH----HHHHHHSC-
T ss_pred CHHHHHHHHHHHHHhChheEEeecC-CCHHHHHHHHHHH-HHh---cCCCCEEEEECCC-CcCHHHH----HHHHHHHH-
Confidence 5677777888888999999874211 1222222333332 112 1245666666532 2333222 23344451
Q ss_pred CccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEe-cCccHHHHHHHHHhcCCCCccccCC
Q 035739 127 EYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGL-SNFSRKKIETILTFATIPPSINQVE 205 (335)
Q Consensus 127 d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~~~q~~ 205 (335)
+..++ ++..|.. -++.+.++++.-.|--++- +-++.+.+.++++.... .++|+.
T Consensus 215 ~~~~i-~iE~P~~----------------------~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~--d~v~ik 269 (371)
T 2ps2_A 215 HGLDF-ALEAPCA----------------------TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAA--EGIDLK 269 (371)
T ss_dssp TTCCC-EEECCBS----------------------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCC--SEEEEE
T ss_pred hhcCC-cCcCCcC----------------------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCC--CEEEec
Confidence 12355 5665511 3577778887766664443 34568889999887654 355554
Q ss_pred CCcc---cccHHHHHHHHHcCCeEEEeccCCC
Q 035739 206 MHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 206 ~~~~---~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
.+.+ ..-.++..+|+++|+.++..+.+.+
T Consensus 270 ~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 301 (371)
T 2ps2_A 270 ISKAGGLTRGRRQRDICLAAGYSVSVQETCGS 301 (371)
T ss_dssp HHHHTSHHHHHHHHHHHHHHTCEEEEECSSCC
T ss_pred hhhcCCHHHHHHHHHHHHHcCCeEEecCCCcC
Confidence 3322 1226788999999999998877654
No 120
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=44.68 E-value=1.9e+02 Score=26.52 Aligned_cols=152 Identities=14% Similarity=0.142 Sum_probs=90.0
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCCH--HHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHh
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGTE--KALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSAL 124 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygse--~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~L 124 (335)
+.++..+..+.+.+.|++.|=.-...+.+ ...=+++++.+ .+++-|..-.. ..++.+...+ .++.|
T Consensus 188 ~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~v~~vR~~~-------g~~~~l~vDaN-~~~~~~~A~~----~~~~l 255 (412)
T 4h1z_A 188 TRAKRAELAAAWQAKGFSSFKFASPVADDGVAKEMEILRERL-------GPAVRIACDMH-WAHTASEAVA----LIKAM 255 (412)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHHHHHHHHH-------CSSSEEEEECC-SCCCHHHHHH----HHHHH
T ss_pred cHHHHHHHHHHHHhcCcceeccccccchhhHHHHHHHHHhcc-------CCeEEEEeccc-cCCCHHHHHH----HHHhh
Confidence 45667777888889999988654333321 11124566542 23344443332 1233333222 23344
Q ss_pred CCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCcccc
Q 035739 125 QMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSINQ 203 (335)
Q Consensus 125 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q 203 (335)
+..++.++-.|... +-++.+.+|++.-.+. +.|=+-++..++.++++...+ .++|
T Consensus 256 --~~~~l~~iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~--div~ 311 (412)
T 4h1z_A 256 --EPHGLWFAEAPVRT--------------------EDIDGLARVAASVSTAIAVGEEWRTVHDMVPRVARRAL--AIVQ 311 (412)
T ss_dssp --GGGCEEEEECCSCT--------------------TCHHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTTCC--SEEC
T ss_pred --cccccceecCCCCc--------------------cchHHHHHHHhhcCCccccCCcccchHhHHHHHHcCCC--CEEE
Confidence 34567888877432 1246677777765554 566778888999988886543 4666
Q ss_pred CCCCc--ccccHHHHHHHHHcCCeEEEeccCCC
Q 035739 204 VEMHP--VWQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 204 ~~~~~--~~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
....- +..-.++..+|+.+|+.++..+.++.
T Consensus 312 ~d~~~GGit~~~kia~~A~~~gi~v~~h~~~~~ 344 (412)
T 4h1z_A 312 PEMGHKGITQFMRIGAYAHVHHIKVIPHATIGA 344 (412)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCEECCCCCSSC
T ss_pred ecCCCCChHHHHHHHHHHHHCCCcEEecCCcch
Confidence 55321 11125688999999999988777654
No 121
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=43.29 E-value=1.8e+02 Score=26.25 Aligned_cols=145 Identities=10% Similarity=-0.006 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHcCCCEeeCCCCcCCHH---HHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhC
Q 035739 49 DALKLVVLEAIKLGYRHFDTAAMYGTEK---ALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQ 125 (335)
Q Consensus 49 ~~~~~~l~~A~~~Gin~~DtA~~Ygse~---~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg 125 (335)
++..+..+++.+.|++.|..=-.-++-+ .+=+++++.+ -+++-|..... ..++.+...+- ++.|.
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~-------G~d~~l~vDan-~~~~~~~a~~~----~~~l~ 208 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTA-------GSSITMILDAN-QSYDAAAAFKW----ERYFS 208 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHH-------CTTSEEEEECT-TCCCHHHHHTT----HHHHT
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhh-------CCCCEEEEECC-CCCCHHHHHHH----HHHHh
Confidence 6677777888899999886421112211 1123445431 23455555653 23334333322 33332
Q ss_pred CCcc-ceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEE-EecCccHHHHHHHHHhcCCCCcccc
Q 035739 126 MEYL-DLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSI-GLSNFSRKKIETILTFATIPPSINQ 203 (335)
Q Consensus 126 ~d~i-Dl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~i-Gvs~~~~~~l~~~~~~~~~~~~~~q 203 (335)
.. ++.++..|... +-++.+.++++.-.|--. |=+-++...+.++++.... .++|
T Consensus 209 --~~~~i~~iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~v~ 264 (382)
T 2gdq_A 209 --EWTNIGWLEEPLPF--------------------DQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCL--DIIQ 264 (382)
T ss_dssp --TCSCEEEEECCSCS--------------------SCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCC--SEEC
T ss_pred --hccCCeEEECCCCc--------------------ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCC--CEEe
Confidence 23 55567766321 125667777776555543 3445568889998886543 4666
Q ss_pred CCCCcc---cccHHHHHHHHHcCCeEEEe
Q 035739 204 VEMHPV---WQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 204 ~~~~~~---~~~~~~l~~~~~~gi~v~a~ 229 (335)
+..+-+ ..-.++..+|+++|+.++..
T Consensus 265 ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 293 (382)
T 2gdq_A 265 PDVMHVNGIDEFRDCLQLARYFGVRASAH 293 (382)
T ss_dssp CCTTTTTHHHHHHHHHHHHHHHTCEECCC
T ss_pred cCccccCCHHHHHHHHHHHHHcCCEEeec
Confidence 655543 22267899999999998877
No 122
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=42.06 E-value=91 Score=26.90 Aligned_cols=59 Identities=17% Similarity=0.098 Sum_probs=32.0
Q ss_pred HHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCcc
Q 035739 121 LSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFS 184 (335)
Q Consensus 121 L~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~ 184 (335)
-+.-|.+ ++||-|-.....-..++-+..-......+++...|+...+. .=.++|+.||.
T Consensus 75 A~~~G~E----vllHlPMep~~~p~~~~gp~~L~~~~s~~ei~~~l~~al~~-vP~a~GvnNHm 133 (261)
T 2qv5_A 75 ARREGHE----ILLQIPLEPFGYPGTNPGPDTLLAGDPAKVNIDRLHRSMAK-ITNYTGVMNYL 133 (261)
T ss_dssp HHHHTCC----EEEEEEECCTTTTTSCCCTTCBCTTSCHHHHHHHHHHHHTT-CCCCSEEEEEE
T ss_pred HHHCCCE----EEEECCCCCCCCCCCCCCcCcCcCCCCHHHHHHHHHHHHHH-CCCcEEEeccc
Confidence 3455655 57887644221000111111122346678888888877765 23468999886
No 123
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=42.03 E-value=1.5e+02 Score=27.26 Aligned_cols=150 Identities=13% Similarity=0.110 Sum_probs=86.9
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCC-------CcCC--------------------------HH--HHHHHHHHHHHcCCC
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAA-------MYGT--------------------------EK--ALGEAIAEALRLGLV 91 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~-------~Ygs--------------------------e~--~lG~~l~~~~~~g~~ 91 (335)
+.++..+.++.+++.|++.|-.=- .||. +. .+=+++++.
T Consensus 143 ~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~avR~a------ 216 (418)
T 3r4e_A 143 DIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLFEELRKT------ 216 (418)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHHHHHHHH------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHH------
Confidence 567888888999999999885311 1221 11 112345543
Q ss_pred CCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 035739 92 SSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQM 171 (335)
Q Consensus 92 ~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~ 171 (335)
--+++-|..... ...+.+...+ +-+.|+.+++ .++..|... +-++.+.++++
T Consensus 217 -~G~d~~l~vDaN-~~~~~~~A~~-~~~~L~~~~i-----~~iEqP~~~--------------------~d~~~~~~l~~ 268 (418)
T 3r4e_A 217 -YGFDHHLLHDGH-HRYTPQEAAN-LGKMLEPYQL-----FWLEDCTPA--------------------ENQEAFRLVRQ 268 (418)
T ss_dssp -HCSSSEEEEECT-TCSCHHHHHH-HHHHHGGGCC-----SEEESCSCC--------------------SSGGGGHHHHH
T ss_pred -cCCCCeEEEeCC-CCCCHHHHHH-HHHHHHhhCC-----CEEECCCCc--------------------cCHHHHHHHHh
Confidence 124455555653 2333433332 2234555554 445666321 11345667777
Q ss_pred cCCcc-EEEecCccHHHHHHHHHhcCCCCccccCCCCcc---cccHHHHHHHHHcCCeEEEeccC
Q 035739 172 LGLTK-SIGLSNFSRKKIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPL 232 (335)
Q Consensus 172 ~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl 232 (335)
.-.|. ..|=+-++..++.++++.... .++|+...-+ ..-.++..+|+++|+.++..+.+
T Consensus 269 ~~~iPIa~dE~~~~~~~~~~~l~~~a~--d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 331 (418)
T 3r4e_A 269 HTVTPLAVGEIFNTIWDAKDLIQNQLI--DYIRATVVGAGGLTHLRRIADLASLYQVRTGCHGPT 331 (418)
T ss_dssp HCCSCEEECTTCCSGGGTHHHHHTTCC--SEECCCTTTTTHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred cCCCCEEEcCCcCCHHHHHHHHHcCCC--CeEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 65565 344455667888888885543 4666665543 22367899999999999988775
No 124
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=41.90 E-value=1.1e+02 Score=25.58 Aligned_cols=86 Identities=20% Similarity=0.213 Sum_probs=50.7
Q ss_pred HHHHHHHHHHcCCccEEEecCc----------------c---HHHHHHHHHhcCCCCccccCCCCccccc-HHHHHHHHH
Q 035739 162 VWEAMEESQMLGLTKSIGLSNF----------------S---RKKIETILTFATIPPSINQVEMHPVWQQ-RKLIEFCKA 221 (335)
Q Consensus 162 ~~~~L~~l~~~Gkir~iGvs~~----------------~---~~~l~~~~~~~~~~~~~~q~~~~~~~~~-~~~l~~~~~ 221 (335)
.-+.++.+++.| ...|-+... + ...+.++++..++.+......++..... ...++.|++
T Consensus 24 ~~~~l~~~~~~G-~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~ 102 (262)
T 3p6l_A 24 LTEALDKTQELG-LKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKA 102 (262)
T ss_dssp HHHHHHHHHHTT-CCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-CCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHHH
Confidence 345566666777 466666532 2 3456666777776655554443322222 678888999
Q ss_pred cCCeEEEeccCCCCCCcCCCCccCChHHHHHHHHHhCC
Q 035739 222 KGIIVTAYSPLGAVGKIYGSNQVLENEALKEIAKARGK 259 (335)
Q Consensus 222 ~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~la~~~g~ 259 (335)
.|+..+...|-. . .-..+.++|+++|+
T Consensus 103 lGa~~v~~~~~~--------~---~~~~l~~~a~~~gv 129 (262)
T 3p6l_A 103 MDLEFITCEPAL--------S---DWDLVEKLSKQYNI 129 (262)
T ss_dssp TTCSEEEECCCG--------G---GHHHHHHHHHHHTC
T ss_pred cCCCEEEecCCH--------H---HHHHHHHHHHHhCC
Confidence 998877765421 1 12566777777765
No 125
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=41.60 E-value=1.2e+02 Score=26.70 Aligned_cols=100 Identities=11% Similarity=0.047 Sum_probs=66.9
Q ss_pred HHHHHHHcCCccEEEecCccHHHHHHHHHhcCCC--------------CccccCCCCcccccHHHHHHHHHcCCeEEEec
Q 035739 165 AMEESQMLGLTKSIGLSNFSRKKIETILTFATIP--------------PSINQVEMHPVWQQRKLIEFCKAKGIIVTAYS 230 (335)
Q Consensus 165 ~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~--------------~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~ 230 (335)
.+..+++...++-++|++-+.+..+++.+..+++ ++++- -..|.....++...|-++|+.|++=+
T Consensus 39 ~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~-I~tP~~~H~~~~~~al~aGkhVl~EK 117 (350)
T 4had_A 39 VVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVY-IPLPTSQHIEWSIKAADAGKHVVCEK 117 (350)
T ss_dssp HHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEE-ECSCGGGHHHHHHHHHHTTCEEEECS
T ss_pred HHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEE-EeCCCchhHHHHHHHHhcCCEEEEeC
Confidence 3555666777888999999888777776654432 11111 12333334788888999999999999
Q ss_pred cCCCCCCcCCCCccCChHHHHHHHHHhCC----------CHHHHHHHHHhhcC
Q 035739 231 PLGAVGKIYGSNQVLENEALKEIAKARGK----------TVAQVSLRWIVEQG 273 (335)
Q Consensus 231 pl~~~G~l~~~~~~~~~~~l~~la~~~g~----------s~~q~al~~~l~~~ 273 (335)
|++. ...+.+++.+.|++.|+ .|.-..++=.+..|
T Consensus 118 Pla~--------~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i~~G 162 (350)
T 4had_A 118 PLAL--------KAGDIDAVIAARDRNKVVVTEAYMITYSPVWQKVRSLIDEG 162 (350)
T ss_dssp CCCS--------SGGGGHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTT
T ss_pred Cccc--------chhhHHHHHHHHHHcCCceeEeeeeecCHHHHHhhHhhhcC
Confidence 9985 34456788888988875 45544555555544
No 126
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=40.83 E-value=67 Score=24.04 Aligned_cols=64 Identities=11% Similarity=0.121 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEe
Q 035739 160 RGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 160 ~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~ 229 (335)
..++..|....+.|++. .|+ .+...+++......+++--..++..-...+..+|+++||+++-.
T Consensus 6 ~ki~~~L~~a~k~gkl~-~G~-----~~v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v 69 (121)
T 2lbw_A 6 KKVLKTVKKASKAKNVK-RGV-----KEVVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFI 69 (121)
T ss_dssp HHHHHHHHHHHTTTCEE-ESH-----HHHHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEEC
T ss_pred HHHHHHHHHHHHcCCcc-ccH-----HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEE
Confidence 34667777778888864 444 67777888777777777777776544466788999999998764
No 127
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=40.52 E-value=1.9e+02 Score=25.41 Aligned_cols=148 Identities=11% Similarity=0.086 Sum_probs=79.1
Q ss_pred HHHHHHHHHHcCCCEeeCCCCcC-C--HHHHH--HHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhC
Q 035739 51 LKLVVLEAIKLGYRHFDTAAMYG-T--EKALG--EAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQ 125 (335)
Q Consensus 51 ~~~~l~~A~~~Gin~~DtA~~Yg-s--e~~lG--~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg 125 (335)
..+.+++....+..+|+..+.=| + +..+. ..++.. .|+ -....+.+.+.+...+...+... +.+|
T Consensus 41 l~~~~~~l~~l~p~fvsVT~gagg~~r~~t~~~a~~i~~~--~g~-------~~v~Hltc~~~~~~~l~~~L~~~-~~~G 110 (304)
T 3fst_A 41 LWNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDR--TGL-------EAAPHLTCIDATPDELRTIARDY-WNNG 110 (304)
T ss_dssp HHHHHHHHHTTCCSEEEECCCTTSSCHHHHHHHHHHHHHH--HCC-------CEEEEEESTTSCHHHHHHHHHHH-HHTT
T ss_pred HHHHHHHHhcCCCCEEEEeeCCCCcchhHHHHHHHHHHHH--hCC-------CeeEEeecCCCCHHHHHHHHHHH-HHCC
Confidence 34456766678999999886555 2 33332 233321 142 22222223456777777777665 5888
Q ss_pred CCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCcc---------HHHHHHHHHh--
Q 035739 126 MEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFS---------RKKIETILTF-- 194 (335)
Q Consensus 126 ~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~---------~~~l~~~~~~-- 194 (335)
++. ++.|-.-.+.. + +.....-.++++.+. +.+.. .||++.++ ..++..+.+.
T Consensus 111 I~n--ILaLrGDpp~~-~---------~~~~~~A~dLv~~ir---~~~~f-~IgvA~yPE~Hp~a~~~~~d~~~Lk~Kvd 174 (304)
T 3fst_A 111 IRH--IVALRGDLPPG-S---------GKPEMYASDLVTLLK---EVADF-DISVAAYPEVHPEAKSAQADLLNLKRKVD 174 (304)
T ss_dssp CCE--EEEECCCCC----------------CCCHHHHHHHHH---HHCCC-EEEEEECTTCCTTCSCHHHHHHHHHHHHH
T ss_pred CCE--EEEecCCCCCC-C---------CCCCCCHHHHHHHHH---HcCCC-eEEEEeCCCcCCCCCCHHHHHHHHHHHHH
Confidence 763 45554321110 0 001122344555443 33443 68988763 1245555444
Q ss_pred cCCCCccccCCCCcccccHHHHHHHHHcCCe
Q 035739 195 ATIPPSINQVEMHPVWQQRKLIEFCKAKGII 225 (335)
Q Consensus 195 ~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~ 225 (335)
++-.+.+.|+-|+.- .-...++.|++.||.
T Consensus 175 AGAdf~iTQ~ffD~~-~~~~f~~~~r~~Gi~ 204 (304)
T 3fst_A 175 AGANRAITQFFFDVE-SYLRFRDRCVSAGID 204 (304)
T ss_dssp HTCCEEEECCCSCHH-HHHHHHHHHHHTTCC
T ss_pred cCCCEEEeCccCCHH-HHHHHHHHHHhcCCC
Confidence 456677888777631 115678889999864
No 128
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=40.42 E-value=2.1e+02 Score=25.88 Aligned_cols=146 Identities=10% Similarity=0.072 Sum_probs=85.2
Q ss_pred ChHHHHHHHHHHHHc-CCCEeeCCCCcC---CHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKL-GYRHFDTAAMYG---TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 122 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~-Gin~~DtA~~Yg---se~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~ 122 (335)
+.++..+.++.+++. |++.|-.=-... .+...=+++++.+ -+++-|...... ..+.+...+ +-+.|+
T Consensus 167 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a~-------G~~~~l~vDaN~-~~~~~~A~~-~~~~l~ 237 (383)
T 3toy_A 167 DARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRALL-------GPDIALMLDFNQ-SLDPAEATR-RIARLA 237 (383)
T ss_dssp CHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHHH-------CTTSEEEEECTT-CSCHHHHHH-HHHHHG
T ss_pred CHHHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHHh-------CCCCeEEEeCCC-CCCHHHHHH-HHHHHH
Confidence 667778888889999 999886432221 1122224555531 244555556532 233333222 233445
Q ss_pred HhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCcc
Q 035739 123 ALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSI 201 (335)
Q Consensus 123 ~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~ 201 (335)
.++ +.++..|... +-++.+.++++.-.|. ..|=+-++..++.++++.... .+
T Consensus 238 ~~~-----i~~iEeP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~--d~ 290 (383)
T 3toy_A 238 DYD-----LTWIEEPVPQ--------------------ENLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGAS--DF 290 (383)
T ss_dssp GGC-----CSEEECCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCC--SE
T ss_pred hhC-----CCEEECCCCc--------------------chHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCC--CE
Confidence 555 4455666321 1245667777765554 455666778888888886654 46
Q ss_pred ccCCCCcc---cccHHHHHHHHHcCCeEEE
Q 035739 202 NQVEMHPV---WQQRKLIEFCKAKGIIVTA 228 (335)
Q Consensus 202 ~q~~~~~~---~~~~~~l~~~~~~gi~v~a 228 (335)
+|+...-+ ..-.++...|+++|+.++.
T Consensus 291 v~ik~~~~GGit~~~~ia~~A~~~gi~~~~ 320 (383)
T 3toy_A 291 IMPDLMKVGGITGWLNVAGQADAASIPMSS 320 (383)
T ss_dssp ECCCTTTTTHHHHHHHHHHHHHHHTCCBCC
T ss_pred EEeCccccCCHHHHHHHHHHHHHcCCEEee
Confidence 66665543 2226788999999999764
No 129
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=40.01 E-value=1.7e+02 Score=25.42 Aligned_cols=140 Identities=15% Similarity=0.130 Sum_probs=75.4
Q ss_pred hHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHc-CCccEEEecCccHHHHHH
Q 035739 112 HVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQML-GLTKSIGLSNFSRKKIET 190 (335)
Q Consensus 112 ~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~-Gkir~iGvs~~~~~~l~~ 190 (335)
.-+..+-+.|.++|+++|++-. |.. ...-++.+..+.+. ..++..++.......++.
T Consensus 27 ~~K~~i~~~L~~~Gv~~IE~g~---p~~-------------------~~~d~e~v~~i~~~~~~~~i~~l~~~~~~di~~ 84 (293)
T 3ewb_X 27 KEKIQIALQLEKLGIDVIEAGF---PIS-------------------SPGDFECVKAIAKAIKHCSVTGLARCVEGDIDR 84 (293)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEC---GGG-------------------CHHHHHHHHHHHHHCCSSEEEEEEESSHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeC---CCC-------------------CccHHHHHHHHHHhcCCCEEEEEecCCHHHHHH
Confidence 3445566668999999999863 321 11344455555543 457777777666667777
Q ss_pred HHHh---cCCCCccccCCCCccc-------c-------cHHHHHHHHHcCCeEEEeccCCCCCCcCCCCccCChHHHHHH
Q 035739 191 ILTF---ATIPPSINQVEMHPVW-------Q-------QRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQVLENEALKEI 253 (335)
Q Consensus 191 ~~~~---~~~~~~~~q~~~~~~~-------~-------~~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~~~~~~~l~~l 253 (335)
+++. ++.+.+.+-+..|... . -.+.+++|+++|+.|...-+.+ + ....+.+.++
T Consensus 85 a~~~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~--~-------~~~~~~~~~~ 155 (293)
T 3ewb_X 85 AEEALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDA--T-------RSDRAFLIEA 155 (293)
T ss_dssp HHHHHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETG--G-------GSCHHHHHHH
T ss_pred HHHHHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccC--C-------CCCHHHHHHH
Confidence 7774 3322111111122111 1 1467889999998876433322 1 1122333333
Q ss_pred HHHhCCCHHHHHHHHHhhcC--CEEE---eCCCCHHHHHHhhcccc
Q 035739 254 AKARGKTVAQVSLRWIVEQG--ATVV---IKSLNLERMKQNLGIFD 294 (335)
Q Consensus 254 a~~~g~s~~q~al~~~l~~~--~~vi---~g~~~~~~l~enl~a~~ 294 (335)
++. +...| ...| +|..+|.++.+.++.+.
T Consensus 156 ~~~------------~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~ 189 (293)
T 3ewb_X 156 VQT------------AIDAGATVINIPDTVGYTNPTEFGQLFQDLR 189 (293)
T ss_dssp HHH------------HHHTTCCEEEEECSSSCCCHHHHHHHHHHHH
T ss_pred HHH------------HHHcCCCEEEecCCCCCCCHHHHHHHHHHHH
Confidence 322 22234 2333 56778888888877654
No 130
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=39.92 E-value=2.2e+02 Score=25.86 Aligned_cols=150 Identities=15% Similarity=0.147 Sum_probs=89.4
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCC
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQM 126 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~ 126 (335)
+.++..+.++.+++.|++.|=.=-.-+.+...=+++++. - .++-|..-... ..+.+...+ ++.|
T Consensus 149 ~~e~~~~~~~~~~~~G~~~~K~Kv~~~~d~~~v~avR~~-------~-~~~~l~vDaN~-~~~~~~A~~-----~~~l-- 212 (388)
T 3qld_A 149 SLDVLIQSVDAAVEQGFRRVKLKIAPGRDRAAIKAVRLR-------Y-PDLAIAADANG-SYRPEDAPV-----LRQL-- 212 (388)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECBTTBSHHHHHHHHHH-------C-TTSEEEEECTT-CCCGGGHHH-----HHHG--
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCcHHHHHHHHHHHHH-------C-CCCeEEEECCC-CCChHHHHH-----HHHH--
Confidence 367888888899999999874321112211122566664 3 34555544422 334444432 3444
Q ss_pred CccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCccccCC
Q 035739 127 EYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSINQVE 205 (335)
Q Consensus 127 d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~ 205 (335)
+..++.++-.|... +-++.+.++++.-.|. +.|=+.++...+.++++.... .++|+.
T Consensus 213 ~~~~i~~iEeP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~--d~v~~k 270 (388)
T 3qld_A 213 DAYDLQFIEQPLPE--------------------DDWFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAA--RVLNVK 270 (388)
T ss_dssp GGGCCSCEECCSCT--------------------TCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCC--SEEEEC
T ss_pred hhCCCcEEECCCCc--------------------ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCC--CEEEEC
Confidence 23466678877432 1245666676654443 667778888899998886543 356555
Q ss_pred CCcc---cccHHHHHHHHHcCCeEEEeccCCC
Q 035739 206 MHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 206 ~~~~---~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
.+.+ ..-.++..+|+++|+.++..+.+.+
T Consensus 271 ~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 302 (388)
T 3qld_A 271 PGRLGGFGATLRALDVAGEAGMAAWVGGMYET 302 (388)
T ss_dssp HHHHTSHHHHHHHHHHHHHTTCEEEECCCCCC
T ss_pred chhhCCHHHHHHHHHHHHHCCCeEEecCccch
Confidence 4332 2226789999999999987665543
No 131
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=39.79 E-value=2.2e+02 Score=26.00 Aligned_cols=144 Identities=11% Similarity=0.089 Sum_probs=85.6
Q ss_pred hHHHHHHHHHHHHc-CCCEeeCCCCcCC--HHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHh
Q 035739 48 TDALKLVVLEAIKL-GYRHFDTAAMYGT--EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSAL 124 (335)
Q Consensus 48 ~~~~~~~l~~A~~~-Gin~~DtA~~Ygs--e~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~L 124 (335)
.++..+.++.+++. |++.|-.=-.... +...=+++++. - +++-|...... ..+.+...+ +-+.|+.+
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG~~~~~d~~~v~avR~~-------~-~~~~l~vDaN~-~w~~~~A~~-~~~~l~~~ 238 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGTTDCAGDVAILRAVREA-------L-PGVNLRVDPNA-AWSVPDSVR-AGIALEEL 238 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECCSCHHHHHHHHHHHHHH-------C-TTSEEEEECTT-CSCHHHHHH-HHHHHGGG
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHh-------C-CCCeEEeeCCC-CCCHHHHHH-HHHHHhhc
Confidence 46777788888898 9998854332221 12222456654 3 55556555432 233333322 22344555
Q ss_pred CCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCcccc
Q 035739 125 QMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSINQ 203 (335)
Q Consensus 125 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q 203 (335)
+ +.++..|. . -++.+.++++.-.|. +.|=+-++..++.++++.... .++|
T Consensus 239 ~-----i~~iEqP~-------------------~---d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~--d~v~ 289 (398)
T 4dye_A 239 D-----LEYLEDPC-------------------V---GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAV--DVIH 289 (398)
T ss_dssp C-----CSEEECCS-------------------S---HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTCC--SEEE
T ss_pred C-----CCEEcCCC-------------------C---CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCC--CEEE
Confidence 4 44555551 1 467777777765454 555566778888888886543 4565
Q ss_pred CCCCcc---cccHHHHHHHHHcCCeEEEec
Q 035739 204 VEMHPV---WQQRKLIEFCKAKGIIVTAYS 230 (335)
Q Consensus 204 ~~~~~~---~~~~~~l~~~~~~gi~v~a~~ 230 (335)
+...-+ ..-.++..+|+++|+.++..+
T Consensus 290 ~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 319 (398)
T 4dye_A 290 GDVYKWGGIAATKALAAHCETFGLGMNLHS 319 (398)
T ss_dssp ECHHHHTSHHHHHHHHHHHHHHTCEEEECC
T ss_pred eCccccCCHHHHHHHHHHHHHcCCeEEEcC
Confidence 544332 222678999999999999876
No 132
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=39.57 E-value=1.9e+02 Score=25.25 Aligned_cols=156 Identities=11% Similarity=0.134 Sum_probs=0.0
Q ss_pred CChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcCCCCCCC---ceEEeeccCCCCCChhhHHHHHHHHHH
Q 035739 46 SDTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSRE---QLFITSKLWCQNAHRDHVIPALKKSLS 122 (335)
Q Consensus 46 ~~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g~~~~R~---~~~i~tK~~~~~~~~~~i~~~~e~sL~ 122 (335)
.+.+++.++++.+.+.|++.|. ..|-|..+-.-+.+.++.-. ... .+.|+|.. ..+.+ .-+.|+
T Consensus 50 ls~e~i~~~i~~~~~~g~~~i~---~tGGEPll~~~l~~li~~~~--~~~~~~~i~i~TNG-------~ll~~-~~~~L~ 116 (340)
T 1tv8_A 50 LTFDEMARIAKVYAELGVKKIR---ITGGEPLMRRDLDVLIAKLN--QIDGIEDIGLTTNG-------LLLKK-HGQKLY 116 (340)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEE---EESSCGGGSTTHHHHHHHHT--TCTTCCEEEEEECS-------TTHHH-HHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEE---EeCCCccchhhHHHHHHHHH--hCCCCCeEEEEeCc-------cchHH-HHHHHH
Q ss_pred HhCCCccceEEeecCCCC----------CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC---CccEEEecCccHHHHH
Q 035739 123 ALQMEYLDLYLVHWPISS----------KPGELGFPEPKEDLLPMDYRGVWEAMEESQMLG---LTKSIGLSNFSRKKIE 189 (335)
Q Consensus 123 ~Lg~d~iDl~~lH~p~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~G---kir~iGvs~~~~~~l~ 189 (335)
..|++++. +-|+..++. . ++.++++++.+++.| ++..+-+...+.+++.
T Consensus 117 ~~g~~~v~-iSld~~~~~~~~~i~~~~~~-----------------~~~v~~~i~~l~~~g~~v~i~~vv~~g~n~~ei~ 178 (340)
T 1tv8_A 117 DAGLRRIN-VSLDAIDDTLFQSINNRNIK-----------------ATTILEQIDYATSIGLNVKVNVVIQKGINDDQII 178 (340)
T ss_dssp HHTCCEEE-EECCCSSHHHHHHHHSSCCC-----------------HHHHHHHHHHHHHTTCEEEEEEEECTTTTGGGHH
T ss_pred HCCCCEEE-EecCCCCHHHHHHhhCCCCC-----------------HHHHHHHHHHHHHCCCCEEEEEEEeCCCCHHHHH
Q ss_pred HHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCe--EEEeccCCCCCCcCCCCccCChHHHHHHHHHh
Q 035739 190 TILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGII--VTAYSPLGAVGKIYGSNQVLENEALKEIAKAR 257 (335)
Q Consensus 190 ~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~--v~a~~pl~~~G~l~~~~~~~~~~~l~~la~~~ 257 (335)
++++ ++++.|+. ++.+.|++. +..+........+++.+...+.
T Consensus 179 ~~~~------------------------~~~~~g~~~~~i~~~p~~~-~~~~~~~~~~~~~e~~~~l~~~ 223 (340)
T 1tv8_A 179 PMLE------------------------YFKDKHIEIRFIEFMDVGN-DNGWDFSKVVTKDEMLTMIEQH 223 (340)
T ss_dssp HHHH------------------------HHHHTTCCEEEEECCCBCS-SSSBCCSSCCCHHHHHHHHHHH
T ss_pred HHHH------------------------HHHhcCCeEEEEEeeEcCC-CccchhhcCCCHHHHHHHHHhh
No 133
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=39.48 E-value=48 Score=25.45 Aligned_cols=64 Identities=14% Similarity=0.146 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEe
Q 035739 160 RGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 160 ~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~ 229 (335)
..+++.|....+.|++. .|+ .+...+++......+++--...+......+..+|+++||+++-.
T Consensus 18 ~ki~~~L~lA~k~gkl~-~G~-----~~v~kai~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v 81 (134)
T 2ale_A 18 QQILDVVQQAANLRQLK-KGA-----NEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFV 81 (134)
T ss_dssp HHHHHHHHHHHHTTCEE-ESH-----HHHHHHHHHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHcCCcc-cCc-----hHHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 44667788888889874 454 67778888777666677667776655567889999999997765
No 134
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=39.21 E-value=49 Score=24.30 Aligned_cols=63 Identities=14% Similarity=0.079 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEe
Q 035739 160 RGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 160 ~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~ 229 (335)
..+...|....+.|++. .|+ .+...+++......+++--.. +.+....+..+|++++|+++.+
T Consensus 7 ~~i~~~L~la~kagkl~-~G~-----~~v~kai~~gka~lViiA~D~-~~~~~~~l~~~c~~~~Vp~~~~ 69 (110)
T 3cpq_A 7 MDVNKAIRTAVDTGKVI-LGS-----KRTIKFVKHGEGKLVVLAGNI-PKDLEEDVKYYAKLSNIPVYQH 69 (110)
T ss_dssp CHHHHHHHHHHHHSEEE-ESH-----HHHHHHHHTTCCSEEEECTTC-BHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHcCCee-eCH-----HHHHHHHHcCCceEEEEeCCC-CHHHHHHHHHHHHHcCCCEEEE
Confidence 35677888888888864 343 677778887666655555555 4344467888999999998776
No 135
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=39.20 E-value=1.5e+02 Score=25.70 Aligned_cols=102 Identities=14% Similarity=0.100 Sum_probs=63.3
Q ss_pred hHHHHHHHHH--HHhCCCccceEEee-cCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHc-CCccEEEecCccHHH
Q 035739 112 HVIPALKKSL--SALQMEYLDLYLVH-WPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQML-GLTKSIGLSNFSRKK 187 (335)
Q Consensus 112 ~i~~~~e~sL--~~Lg~d~iDl~~lH-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~-Gkir~iGvs~~~~~~ 187 (335)
.....+++.+ -.-|.|.||+---. +|...... .......+...++.+++. +. -|.+-+++++.
T Consensus 36 ~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~-----------~~eE~~rv~pvi~~l~~~~~~--piSIDT~~~~v 102 (282)
T 1aj0_A 36 SLIDAVKHANLMINAGATIIDVGGESTRPGAAEVS-----------VEEELQRVIPVVEAIAQRFEV--WISVDTSKPEV 102 (282)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCC-----------HHHHHHHHHHHHHHHHHHCCC--EEEEECCCHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCC-----------HHHHHHHHHHHHHHHHhhcCC--eEEEeCCCHHH
Confidence 3444444443 34588999987643 24321100 011134456667777665 43 48999999999
Q ss_pred HHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEecc
Q 035739 188 IETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSP 231 (335)
Q Consensus 188 l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~p 231 (335)
++++++. +. ..+|-+.- . ...++++.++++|.+++.+..
T Consensus 103 a~aAl~a-Ga-~iINdvsg--~-~d~~~~~~~a~~~~~vVlmh~ 141 (282)
T 1aj0_A 103 IRESAKV-GA-HIINDIRS--L-SEPGALEAAAETGLPVCLMHM 141 (282)
T ss_dssp HHHHHHT-TC-CEEEETTT--T-CSTTHHHHHHHHTCCEEEECC
T ss_pred HHHHHHc-CC-CEEEECCC--C-CCHHHHHHHHHhCCeEEEEcc
Confidence 9999996 32 34443332 2 446889999999999999854
No 136
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=39.18 E-value=2.3e+02 Score=25.95 Aligned_cols=148 Identities=16% Similarity=0.154 Sum_probs=87.6
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCC--CcC-------CHH------HHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChh
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAA--MYG-------TEK------ALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRD 111 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~--~Yg-------se~------~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~ 111 (335)
+.++..+..+.+++.|++.|-.-. .|. +.. ..=+++|+. --+++-|...... ..+.+
T Consensus 144 ~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a-------~G~d~~l~vDaN~-~~~~~ 215 (412)
T 4e4u_A 144 DPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREA-------VGSKADLLFGTHG-QMVPS 215 (412)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHH-------HTTSSEEEECCCS-CBCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHH-------hCCCCeEEEECCC-CCCHH
Confidence 567778888889999999987632 111 111 112344543 1245556666532 23333
Q ss_pred hHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHH
Q 035739 112 HVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIET 190 (335)
Q Consensus 112 ~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~ 190 (335)
...+ +-+.|+.+++ .++..|... +-++.+.++++.-.|. ..|=+-++...+.+
T Consensus 216 ~A~~-~~~~L~~~~i-----~~iEeP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ 269 (412)
T 4e4u_A 216 SAIR-LAKRLEKYDP-----LWFEEPVPP--------------------GQEEAIAQVAKHTSIPIATGERLTTKYEFHK 269 (412)
T ss_dssp HHHH-HHHHHGGGCC-----SEEECCSCS--------------------SCHHHHHHHHHTCSSCEEECTTCCHHHHHHH
T ss_pred HHHH-HHHHhhhcCC-----cEEECCCCh--------------------hhHHHHHHHHhhCCCCEEecCccCCHHHHHH
Confidence 3322 2334555554 445666321 1246677888776665 44455667888888
Q ss_pred HHHhcCCCCccccCCCCcc---cccHHHHHHHHHcCCeEEEec
Q 035739 191 ILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYS 230 (335)
Q Consensus 191 ~~~~~~~~~~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~ 230 (335)
+++.... .++|+...-+ ..-.++...|+++|+.+..+.
T Consensus 270 ~i~~~a~--d~v~~d~~~~GGit~~~kia~~A~~~gi~v~~h~ 310 (412)
T 4e4u_A 270 LLQAGGA--SILQLNVARVGGLLEAKKIATLAEVHYAQIAPHL 310 (412)
T ss_dssp HHHTTCC--SEECCCTTTTTSHHHHHHHHHHHHHTTCEECCCC
T ss_pred HHHcCCC--CEEEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 8886543 4666665543 223678999999999986653
No 137
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=38.59 E-value=2.1e+02 Score=25.43 Aligned_cols=150 Identities=17% Similarity=0.174 Sum_probs=89.9
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCC--HHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHh
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGT--EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSAL 124 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygs--e~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~L 124 (335)
+.++..+..+.+++.|++.|..=-.-.. +...=+++++. --+++-|...... .++.+.. .+.++.|
T Consensus 139 ~~~~~~~~a~~~~~~G~~~~K~K~g~~~~~d~~~v~avR~a-------~g~~~~l~vDan~-~~~~~~a----~~~~~~L 206 (354)
T 3jva_A 139 EPNVMAQKAVEKVKLGFDTLKIKVGTGIEADIARVKAIREA-------VGFDIKLRLDANQ-AWTPKDA----VKAIQAL 206 (354)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHH-------HCTTSEEEEECTT-CSCHHHH----HHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHHHHH-------cCCCCeEEEECCC-CCCHHHH----HHHHHHH
Confidence 5677777888888999999875322111 12222455553 1245566666532 2333322 2334445
Q ss_pred CCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCcccc
Q 035739 125 QMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSINQ 203 (335)
Q Consensus 125 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q 203 (335)
. ..++.++..|... +-++.+.++++.-.|. ..|=+-++..++.++++.... .++|
T Consensus 207 ~--~~~i~~iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~--d~v~ 262 (354)
T 3jva_A 207 A--DYQIELVEQPVKR--------------------RDLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTV--DVIN 262 (354)
T ss_dssp T--TSCEEEEECCSCT--------------------TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCC--SEEE
T ss_pred H--hcCCCEEECCCCh--------------------hhHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCC--CEEE
Confidence 3 3567777776431 1256677777765554 444566778889888886543 3555
Q ss_pred CCCCcc---cccHHHHHHHHHcCCeEEEeccC
Q 035739 204 VEMHPV---WQQRKLIEFCKAKGIIVTAYSPL 232 (335)
Q Consensus 204 ~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl 232 (335)
+..+-+ ..-.++..+|+++|+.++..+.+
T Consensus 263 ~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~ 294 (354)
T 3jva_A 263 IKLMKCGGIHEALKINQICETAGIECMIGCMA 294 (354)
T ss_dssp ECHHHHTSHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred ECchhcCCHHHHHHHHHHHHHcCCeEEecCCC
Confidence 443322 12267899999999999987777
No 138
>3dnf_A ISPH, LYTB, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; trilobal strucure, open alpha/beta, iron, iron-sulfur, isopr biosynthesis; 1.65A {Aquifex aeolicus}
Probab=38.02 E-value=11 Score=33.36 Aligned_cols=107 Identities=7% Similarity=0.065 Sum_probs=67.2
Q ss_pred HcCCccEEEecCccHHHHHHHHHhcC--CCCccccCCCCcc----cccHHHHHHHHHcCCeEEEeccCCCCCCcCCCCcc
Q 035739 171 MLGLTKSIGLSNFSRKKIETILTFAT--IPPSINQVEMHPV----WQQRKLIEFCKAKGIIVTAYSPLGAVGKIYGSNQV 244 (335)
Q Consensus 171 ~~Gkir~iGvs~~~~~~l~~~~~~~~--~~~~~~q~~~~~~----~~~~~~l~~~~~~gi~v~a~~pl~~~G~l~~~~~~ 244 (335)
...++-.+-=.+.+.+...++++... ++ .+ ...-.++ +|+..+.+++++.++-++.-++-+
T Consensus 155 ~~~kv~~vsQTT~s~~~~~~iv~~L~~r~p-~~-~~~~tIC~AT~~RQ~av~~la~~~D~miVVGg~nS----------- 221 (297)
T 3dnf_A 155 KHERVGIVAQTTQNEEFFKEVVGEIALWVK-EV-KVINTICNATSLRQESVKKLAPEVDVMIIIGGKNS----------- 221 (297)
T ss_dssp GCSEEEEEECTTCCHHHHHHHHHHHHHHSS-EE-EEECCCCSHHHHHHHHHHHHGGGSSEEEEESCTTC-----------
T ss_pred CCCcEEEEEecCCcHHHHHHHHHHHHHhCC-CC-CCCCCccHHHHHHHHHHHHHHhhCCEEEEECCCCC-----------
Confidence 34455555555666666555544322 21 11 1111122 344678888998888888744333
Q ss_pred CChHHHHHHHHHhCC------CHHHHHHHHHhhcC-CEEEeCCCCHHHHHHhh
Q 035739 245 LENEALKEIAKARGK------TVAQVSLRWIVEQG-ATVVIKSLNLERMKQNL 290 (335)
Q Consensus 245 ~~~~~l~~la~~~g~------s~~q~al~~~l~~~-~~vi~g~~~~~~l~enl 290 (335)
.+-..|.++|++.|. ++.++-..|+-... +.+..|+|+|+.+-+.+
T Consensus 222 SNT~rL~eia~~~~~~ty~Ie~~~el~~~wl~~~~~VGITAGASTP~~li~eV 274 (297)
T 3dnf_A 222 GNTRRLYYISKELNPNTYHIETAEELQPEWFRGVKRVGISAGASTPDWIIEQV 274 (297)
T ss_dssp HHHHHHHHHHHHHCSSEEEESSGGGCCGGGGTTCSEEEEEECTTCCHHHHHHH
T ss_pred chhHHHHHHHHhcCCCEEEeCChHHCCHHHhCCCCEEEEeecCCCCHHHHHHH
Confidence 245789999999875 57788788887655 67889999998765443
No 139
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=37.56 E-value=2.6e+02 Score=26.06 Aligned_cols=126 Identities=10% Similarity=0.015 Sum_probs=70.6
Q ss_pred HHHHHHcCCCEe-----eCCCCcCCHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCC--
Q 035739 55 VLEAIKLGYRHF-----DTAAMYGTEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQME-- 127 (335)
Q Consensus 55 l~~A~~~Gin~~-----DtA~~Ygse~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d-- 127 (335)
+.+-++.++.++ +..-.||.++.|-++|++..+.- +.+-++|.|=+-. +-|-..++...+++.-+
T Consensus 52 ~~r~f~e~~~~~sT~l~E~d~VfGg~~~L~~~I~~~~~~~---~P~~I~V~tTC~~-----e~IGdDi~~v~~~~~~~~~ 123 (458)
T 3pdi_B 52 FVRHFREPVPLQTTAMDQVSSVMGADENVVEALKTICERQ---NPSVIGLLTTGLS-----ETQGCDLHTALHEFRTQYE 123 (458)
T ss_dssp HHHHHCSCCCCEECCCCTTTTSSCSHHHHHHHHHHHHHHT---CCSEEEEEECHHH-----HTTCTTHHHHHHHTTTSCC
T ss_pred HHhhcCCCcceeeecccccccccCcHHHHHHHHHHHHHhc---CCCEEEEECCcHH-----HHhcCCHHHHHHHHHHhcc
Confidence 344455555433 22225788888888888875533 5566777776532 33444455555566543
Q ss_pred ---ccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHH---------cCCccEE-EecCcc--HHHHHHH
Q 035739 128 ---YLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEE-SQM---------LGLTKSI-GLSNFS--RKKIETI 191 (335)
Q Consensus 128 ---~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-l~~---------~Gkir~i-Gvs~~~--~~~l~~~ 191 (335)
-+.++.+|.|..... . ......++++|-+ +.+ .++|--| |..++. .+++.++
T Consensus 124 ~~~~~pVi~v~tpgf~gs----------~--~~G~~~a~~al~~~l~~~~~~~~~~~~~~VNii~G~~~~~~D~~eik~l 191 (458)
T 3pdi_B 124 EYKDVPIVPVNTPDFSGC----------F--ESGFAAAVKAIVETLVPERRDQVGKRPRQVNVLCSANLTPGDLEYIAES 191 (458)
T ss_dssp SCSCSCEEEECCCTTSSC----------H--HHHHHHHHHHHHHHSSCSSSCTTCCCSSEEEEEECTTCCHHHHHHHHHH
T ss_pred ccCCCeEEEeeCCCcCCc----------h--hHHHHHHHHHHHHHhhccccCcCCCCCCeEEEEeCCCCChHHHHHHHHH
Confidence 467899998865421 0 0112333444333 221 2456677 765444 4567888
Q ss_pred HHhcCCCCc
Q 035739 192 LTFATIPPS 200 (335)
Q Consensus 192 ~~~~~~~~~ 200 (335)
++..++.+.
T Consensus 192 L~~~Gi~v~ 200 (458)
T 3pdi_B 192 IESFGLRPL 200 (458)
T ss_dssp HHTTTCEEE
T ss_pred HHHcCCEEE
Confidence 887775533
No 140
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=37.26 E-value=2.4e+02 Score=25.55 Aligned_cols=148 Identities=18% Similarity=0.195 Sum_probs=87.5
Q ss_pred ChHHHHHHHHHHHHcCCCEeeC--CCCcCCHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHh
Q 035739 47 DTDALKLVVLEAIKLGYRHFDT--AAMYGTEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSAL 124 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~Dt--A~~Ygse~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~L 124 (335)
+.++..+.++.+.+.|++.|-. .+.. ..+.+ +++++. - .++-|..-.. ..++.+.. + .+++|
T Consensus 161 ~~e~~~~~a~~~~~~G~~~~KiKvg~~~-d~~~v-~avr~a-------~-~~~~l~vDaN-~~~~~~~a-~----~~~~l 224 (393)
T 1wuf_A 161 NVETLLQLVNQYVDQGYERVKLKIAPNK-DIQFV-EAVRKS-------F-PKLSLMADAN-SAYNREDF-L----LLKEL 224 (393)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECBTTB-SHHHH-HHHHTT-------C-TTSEEEEECT-TCCCGGGH-H----HHHTT
T ss_pred CHHHHHHHHHHHHHHhhHhheeccChHH-HHHHH-HHHHHH-------c-CCCEEEEECC-CCCCHHHH-H----HHHHH
Confidence 4566777778888999998742 2211 22223 455542 2 3455555543 23344444 3 23444
Q ss_pred CCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCcccc
Q 035739 125 QMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSINQ 203 (335)
Q Consensus 125 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q 203 (335)
+..++.++-.|... +-++.+.++++.-.|. ..|=+-++...+.++++.... .++|
T Consensus 225 --~~~~i~~iEqP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~--d~v~ 280 (393)
T 1wuf_A 225 --DQYDLEMIEQPFGT--------------------KDFVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSC--RAIN 280 (393)
T ss_dssp --GGGTCSEEECCSCS--------------------SCSHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCC--SEEE
T ss_pred --HhCCCeEEECCCCC--------------------cCHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCC--CEEE
Confidence 23466778877432 1135666777664443 455566788899998876543 4566
Q ss_pred CCCCcc---cccHHHHHHHHHcCCeEEEeccCCC
Q 035739 204 VEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 204 ~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
+..+-+ ..-.++..+|+++|+.++..+.+.+
T Consensus 281 ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 314 (393)
T 1wuf_A 281 LKLARVGGMSSALKIAEYCALNEILVWCGGMLEA 314 (393)
T ss_dssp ECTGGGTSHHHHHHHHHHHHHTTCEEEECCCCCC
T ss_pred eChhhhCCHHHHHHHHHHHHHcCCeEEecCCccc
Confidence 554433 2226789999999999987666543
No 141
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=36.36 E-value=93 Score=27.15 Aligned_cols=100 Identities=13% Similarity=0.049 Sum_probs=53.7
Q ss_pred HHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHH
Q 035739 114 IPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILT 193 (335)
Q Consensus 114 ~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~ 193 (335)
+..+-+.|.++|+++|.+-....|... | . ..+.++.+..+++...++..++. .+...++.+++
T Consensus 29 k~~i~~~L~~~Gv~~IE~g~~~~~~~~-p-------------~--~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~ 91 (298)
T 2cw6_A 29 KIKLIDMLSEAGLSVIETTSFVSPKWV-P-------------Q--MGDHTEVLKGIQKFPGINYPVLT-PNLKGFEAAVA 91 (298)
T ss_dssp HHHHHHHHHHTTCSEECCEECCCTTTC-G-------------G--GTTHHHHHHHSCCCTTCBCCEEC-CSHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCEEEECCCcCcccc-c-------------c--cCCHHHHHHHHhhCCCCEEEEEc-CCHHhHHHHHH
Confidence 446677788999999999764443211 0 0 01222333344333334444444 45667777777
Q ss_pred hcCCCCccccCCCCccc--------------ccHHHHHHHHHcCCeEEEecc
Q 035739 194 FATIPPSINQVEMHPVW--------------QQRKLIEFCKAKGIIVTAYSP 231 (335)
Q Consensus 194 ~~~~~~~~~q~~~~~~~--------------~~~~~l~~~~~~gi~v~a~~p 231 (335)
. +.+.+.+-...+..+ .-.+.+++|+++|+.+.++-.
T Consensus 92 a-g~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~ 142 (298)
T 2cw6_A 92 A-GAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVS 142 (298)
T ss_dssp T-TCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred C-CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEE
Confidence 4 433222222222211 014578999999999876543
No 142
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=35.15 E-value=2.5e+02 Score=25.18 Aligned_cols=150 Identities=11% Similarity=0.015 Sum_probs=86.5
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCC
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQM 126 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~ 126 (335)
+.++..+..+++.+.|++.|..--.-++-+..-+.++.. ++.+ -+++-|..+.. ..++.+ ...+.+++|.
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~av-r~a~---g~~~~l~vDan-~~~~~~----~a~~~~~~l~- 214 (378)
T 2qdd_A 145 TPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAI-SAGL---PDGHRVTFDVN-RAWTPA----IAVEVLNSVR- 214 (378)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHH-HHSC---CTTCEEEEECT-TCCCHH----HHHHHHTSCC-
T ss_pred CHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHH-HHHh---CCCCEEEEeCC-CCCCHH----HHHHHHHHhC-
Confidence 567777788888999999987522111211112223321 1122 23566666653 223332 2233455553
Q ss_pred CccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEe-cCccHHHHHHHHHhcCCCCccccCC
Q 035739 127 EYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGL-SNFSRKKIETILTFATIPPSINQVE 205 (335)
Q Consensus 127 d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGv-s~~~~~~l~~~~~~~~~~~~~~q~~ 205 (335)
.++ ++-.|. . -++.+.++++.-.|--++- +-++.+.+.++++.... .++|+.
T Consensus 215 --~~i-~iEqP~-------------------~---d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~--d~v~ik 267 (378)
T 2qdd_A 215 --ARD-WIEQPC-------------------Q---TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGAC--EGVKIK 267 (378)
T ss_dssp --CCC-EEECCS-------------------S---SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCC--SEEEEC
T ss_pred --CCc-EEEcCC-------------------C---CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCC--CEEEec
Confidence 466 666551 1 4677788887766654443 44568888888886654 355554
Q ss_pred CCcc---cccHHHHHHHHHcCCeEEEeccCC
Q 035739 206 MHPV---WQQRKLIEFCKAKGIIVTAYSPLG 233 (335)
Q Consensus 206 ~~~~---~~~~~~l~~~~~~gi~v~a~~pl~ 233 (335)
.+.+ ..-.++..+|+++|+.++..+.+.
T Consensus 268 ~~~~GGi~~~~~i~~~A~~~g~~~~~~~~~e 298 (378)
T 2qdd_A 268 PNRVGGLTRARQIRDFGVSVGWQMHIEDVGG 298 (378)
T ss_dssp HHHHTSHHHHHHHHHHHHHHTCEEEECCSSC
T ss_pred ccccCCHHHHHHHHHHHHHcCCeEEecCCCC
Confidence 3332 222678899999999999875444
No 143
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=34.69 E-value=2.6e+02 Score=25.35 Aligned_cols=150 Identities=12% Similarity=0.198 Sum_probs=87.9
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCC-CcC-------------------C----HH--HHHHHHHHHHHcCCCCCCCceEEe
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAA-MYG-------------------T----EK--ALGEAIAEALRLGLVSSREQLFIT 100 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~-~Yg-------------------s----e~--~lG~~l~~~~~~g~~~~R~~~~i~ 100 (335)
+.++..+.++.+++.|++.|-.=- .++ . +. .+=+++|+.+ -+++-|.
T Consensus 133 ~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~-------G~d~~l~ 205 (401)
T 3sbf_A 133 TMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKY-------GNQFHIL 205 (401)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHH-------TTSSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHc-------CCCCEEE
Confidence 567888888999999999886311 011 0 11 1124455531 2445566
Q ss_pred eccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEE
Q 035739 101 SKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIG 179 (335)
Q Consensus 101 tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iG 179 (335)
..... ..+.+...+ +-+.|+.+++++ +..|... +-++.+.++++.-.|. ..|
T Consensus 206 vDan~-~~~~~~A~~-~~~~L~~~~i~~-----iEqP~~~--------------------~~~~~~~~l~~~~~iPIa~d 258 (401)
T 3sbf_A 206 HDVHE-RLFPNQAIQ-FAKEVEQYKPYF-----IEDILPP--------------------NQTEWLDNIRSQSSVSLGLG 258 (401)
T ss_dssp EECTT-CSCHHHHHH-HHHHHGGGCCSC-----EECSSCT--------------------TCGGGHHHHHTTCCCCEEEC
T ss_pred EECCC-CCCHHHHHH-HHHHHHhcCCCE-----EECCCCh--------------------hHHHHHHHHHhhCCCCEEeC
Confidence 66532 333333322 223456666544 5555321 1235567777765554 445
Q ss_pred ecCccHHHHHHHHHhcCCCCccccCCCCcc---cccHHHHHHHHHcCCeEEEeccC
Q 035739 180 LSNFSRKKIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPL 232 (335)
Q Consensus 180 vs~~~~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl 232 (335)
=+-++..++.++++.... .++|+....+ ..-.++..+|+++|+.++.++..
T Consensus 259 E~~~~~~~~~~~i~~~~~--d~v~~k~~~~GGit~~~kia~~A~~~gi~~~~h~~~ 312 (401)
T 3sbf_A 259 ELFNNPEEWKSLIANRRI--DFIRCHVSQIGGITPALKLGHLCQNFGVRIAWHCAP 312 (401)
T ss_dssp TTCCSHHHHHHHHHTTCC--SEECCCGGGGTSHHHHHHHHHHHHHHTCEECCCCCT
T ss_pred CccCCHHHHHHHHhcCCC--CEEecCccccCCHHHHHHHHHHHHHcCCEEEecCCc
Confidence 566778899999886543 4666655443 22367899999999998877663
No 144
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=34.43 E-value=79 Score=23.52 Aligned_cols=63 Identities=16% Similarity=0.159 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEE
Q 035739 160 RGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTA 228 (335)
Q Consensus 160 ~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a 228 (335)
..+.+.|....+.|++. .|+ .+...+++......+++--..++......+..+|+++||+++-
T Consensus 15 ~~i~~~L~~A~kag~l~-~G~-----~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~ 77 (120)
T 1vq8_F 15 DDALEALEVARDTGAVK-KGT-----NETTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIF 77 (120)
T ss_dssp HHHHHHHHHHHHSSCEE-ESH-----HHHHHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHHHcCCEe-ECH-----HHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHhcCCCEEE
Confidence 44667777778888864 444 6777888877766667666666654446678899999998643
No 145
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=34.39 E-value=2.3e+02 Score=24.49 Aligned_cols=23 Identities=17% Similarity=0.088 Sum_probs=13.3
Q ss_pred ChHHHHHHHHHHHHcC-CCEeeCC
Q 035739 47 DTDALKLVVLEAIKLG-YRHFDTA 69 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~G-in~~DtA 69 (335)
+.++..++++.|++.| +.++|.-
T Consensus 117 ~~~~~~~ll~~~l~~g~~dyIDvE 140 (276)
T 3o1n_A 117 TTGQYIDLNRAAVDSGLVDMIDLE 140 (276)
T ss_dssp CHHHHHHHHHHHHHHTCCSEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCCEEEEE
Confidence 4455556666666666 5666643
No 146
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=34.30 E-value=2.7e+02 Score=25.53 Aligned_cols=150 Identities=19% Similarity=0.224 Sum_probs=86.9
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCC-CcC-------------------CH------HHHHHHHHHHHHcCCCCCCCceEEe
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAA-MYG-------------------TE------KALGEAIAEALRLGLVSSREQLFIT 100 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~-~Yg-------------------se------~~lG~~l~~~~~~g~~~~R~~~~i~ 100 (335)
+.++..+.++.+++.|++.|-.=- .++ .+ ..+=+++|+. --+++-|.
T Consensus 154 ~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~a-------vG~d~~L~ 226 (422)
T 3tji_A 154 TLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREK-------YGWKLHIL 226 (422)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHH-------HCSSSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHH-------cCCCCEEE
Confidence 567788888999999999886311 011 01 1112445553 12455666
Q ss_pred eccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEE
Q 035739 101 SKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIG 179 (335)
Q Consensus 101 tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iG 179 (335)
..... ..+.+...+ +-+.|+.+++ .++..|... +.++.+.++++.-.|. ..|
T Consensus 227 vDaN~-~~~~~~A~~-~~~~Le~~~i-----~~iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~d 279 (422)
T 3tji_A 227 HDVHE-RLFPQQAVQ-LAKQLEPFQP-----YFIEDILPP--------------------QQSAWLEQVRQQSCVPLALG 279 (422)
T ss_dssp EECTT-CSCHHHHHH-HHHHHGGGCC-----SEEECCSCG--------------------GGGGGHHHHHHHCCCCEEEC
T ss_pred EECCC-CCCHHHHHH-HHHHHHhhCC-----CeEECCCCh--------------------hhHHHHHHHHhhCCCCEEEe
Confidence 66532 333333322 2234555554 445555321 2245667777765554 445
Q ss_pred ecCccHHHHHHHHHhcCCCCccccCCCCcc---cccHHHHHHHHHcCCeEEEeccC
Q 035739 180 LSNFSRKKIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPL 232 (335)
Q Consensus 180 vs~~~~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl 232 (335)
=+-++..++.++++.... .++|+...-+ ..-.++..+|+++|+.++..++.
T Consensus 280 E~~~~~~~~~~ll~~ga~--d~v~~k~~~~GGit~~~kia~lA~a~gv~v~~h~~~ 333 (422)
T 3tji_A 280 ELFNNPAEWHDLIVNRRI--DFIRCHVSQIGGITPALKLAHLCQAFGVRLAWHGPG 333 (422)
T ss_dssp TTCCSGGGTHHHHHTTCC--SEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred CCcCCHHHHHHHHhcCCC--CEEecCccccCCHHHHHHHHHHHHHcCCEEEecCCC
Confidence 566677888888886543 4666655443 22367899999999998877663
No 147
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=34.29 E-value=2.7e+02 Score=25.31 Aligned_cols=202 Identities=15% Similarity=0.091 Sum_probs=99.1
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcC---C---HHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYG---T---EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKS 120 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg---s---e~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~s 120 (335)
..++..+.|+.|-+.|++.+=|+=+.- . -+.+.+.++.. ..-.+-|..-+ +| .+
T Consensus 15 ~~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a-------~~~g~~vi~DI-----sp--------~~ 74 (372)
T 2p0o_A 15 ITNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIA-------KAEKMKIMVDI-----SG--------EA 74 (372)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHH-------HHHTCEEEEEE-----CH--------HH
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHH-------HHCCCEEEEEC-----CH--------HH
Confidence 445667899999999999998886542 1 11222222221 22234444333 22 34
Q ss_pred HHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCC-CC
Q 035739 121 LSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATI-PP 199 (335)
Q Consensus 121 L~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~-~~ 199 (335)
|+.||.+|=|+-.+|........ -|+ ..+. +....|-.+ .--.+=.|+.+.+.++.+++...- .-
T Consensus 75 l~~Lg~s~~dl~~~~~lGi~glR--------LD~-Gf~~----~eia~ls~n-lkIeLNASti~~~~l~~l~~~~~n~~~ 140 (372)
T 2p0o_A 75 LKRAGFSFDELEPLIELGVTGLR--------MDY-GITI----EQMAHASHK-IDIGLNASTITLEEVAELKAHQADFSR 140 (372)
T ss_dssp HHTTTCBTTBCHHHHHHTCCEEE--------ECS-SCCH----HHHHHHHTT-SEEEEETTTCCHHHHHHHHHTTCCGGG
T ss_pred HHHcCCCHHHHHHHHHcCCCEEE--------EcC-CCCH----HHHHHHhcC-CEEEEECccCCHHHHHHHHHcCCChHH
Confidence 45555555555444432111000 000 0112 222333333 222566778888999999886531 10
Q ss_pred ccccCCCCcccc-----c--HHHHHHHHHcCCeEEEeccCCCCCCcCCC--CccCChHHHHHHHHHhCCCHHHHHHHHHh
Q 035739 200 SINQVEMHPVWQ-----Q--RKLIEFCKAKGIIVTAYSPLGAVGKIYGS--NQVLENEALKEIAKARGKTVAQVSLRWIV 270 (335)
Q Consensus 200 ~~~q~~~~~~~~-----~--~~~l~~~~~~gi~v~a~~pl~~~G~l~~~--~~~~~~~~l~~la~~~g~s~~q~al~~~l 270 (335)
...--+|.|..- + .+.-.+.++.||.+.|+-|-. +.+.|+ ..+..-+. -.+++| .++...+.
T Consensus 141 l~a~HNFYPr~~TGLs~~~f~~~n~~~k~~Gi~t~AFI~g~--~~~rGPl~eGLPTLE~------HR~~~~-~~~a~~L~ 211 (372)
T 2p0o_A 141 LEAWHNYYPRPETGIGTTFFNEKNRWLKELGLQVFTFVPGD--GQTRGPIFAGLPTLEK------HRGQNP-FAAAVGLM 211 (372)
T ss_dssp EEEECCCCCSTTCSBCHHHHHHHHHHHHHTTCEEEEEECCS--SSCCTTTCSCCCSBGG------GTTSCH-HHHHHHHH
T ss_pred eEEeeccCCCCCCCCCHHHHHHHHHHHHHCCCcEEEEecCC--CccCCCccCCCCchHH------hCCCCH-HHHHHHHH
Confidence 111112222211 1 445677889999999987653 222222 01111110 113444 44666666
Q ss_pred hcC--CEEEeCCC--CHHHHHHhhc
Q 035739 271 EQG--ATVVIKSL--NLERMKQNLG 291 (335)
Q Consensus 271 ~~~--~~vi~g~~--~~~~l~enl~ 291 (335)
..+ ..|++|-. +.+.++....
T Consensus 212 ~~~~iD~V~IGd~~~S~~el~~l~~ 236 (372)
T 2p0o_A 212 ADPYVDAVYIGDPTISERTMAQFGY 236 (372)
T ss_dssp HSTTCCEEEECSSCCCHHHHHHHHH
T ss_pred hcCCCCEEEECCCCCCHHHHHHHHH
Confidence 764 78898853 4555544433
No 148
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=34.27 E-value=84 Score=22.59 Aligned_cols=62 Identities=6% Similarity=-0.018 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEe
Q 035739 161 GVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 161 ~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~ 229 (335)
.++..|.-.++.|++. .|. .+..++++......+++-...++. ....+..+|+.++|+++-+
T Consensus 6 ki~~~L~la~kagk~v-~G~-----~~v~kai~~gka~lViiA~D~~~~-~~~~i~~~c~~~~vp~~~~ 67 (101)
T 3v7q_A 6 EWFPLLGLANRARKVV-SGE-----DLVIKEIRNARAKLVLLTEDASSN-TAKKVTDKCNYYKVPYKKV 67 (101)
T ss_dssp THHHHHHHHHHTTCEE-ESH-----HHHHHHHHTTCCSEEEEETTSCHH-HHHHHHHHHHHTTCCEEEE
T ss_pred hhHHHhhhhhhhhhcc-cch-----hhhHHHHhcCceeEEEEecccccc-chhhhcccccccCCCeeee
Confidence 4678888889999974 343 677888887776666666666654 3356788899999999876
No 149
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=34.07 E-value=2.3e+02 Score=24.59 Aligned_cols=147 Identities=15% Similarity=0.151 Sum_probs=71.3
Q ss_pred hHHHHHHHHHHHHcCCCEeeCCCCcC-CHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCC
Q 035739 48 TDALKLVVLEAIKLGYRHFDTAAMYG-TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQM 126 (335)
Q Consensus 48 ~~~~~~~l~~A~~~Gin~~DtA~~Yg-se~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~ 126 (335)
...+.+.+..+++.|.+.+.....+. -++.+.+.+... .|+....+++++++ .-..+++..++.+ +
T Consensus 44 ~~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~--~g~~~~~~~v~~~~----------g~~~a~~~~~~~~-~ 110 (370)
T 2z61_A 44 PKPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKDK--YKADIIPDNIIITG----------GSSLGLFFALSSI-I 110 (370)
T ss_dssp CHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHH--SSCCCCGGGEEEES----------SHHHHHHHHHHHH-C
T ss_pred CHHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHH--hCCCCChhhEEECC----------ChHHHHHHHHHHh-c
Confidence 35677788888887643211110010 233344444321 13211456776652 2233444444444 2
Q ss_pred CccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCC
Q 035739 127 EYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEM 206 (335)
Q Consensus 127 d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~ 206 (335)
+.=|-+++..|... .....+ +..| ++.+.+. .+.+.++++++. +.+..++-.+.
T Consensus 111 ~~gd~vl~~~p~~~--------------------~~~~~~---~~~g-~~~~~v~-~d~~~l~~~l~~-~~~~v~~~~p~ 164 (370)
T 2z61_A 111 DDGDEVLIQNPCYP--------------------CYKNFI---RFLG-AKPVFCD-FTVESLEEALSD-KTKAIIINSPS 164 (370)
T ss_dssp CTTCEEEEESSCCT--------------------HHHHHH---HHTT-CEEEEEC-SSHHHHHHHCCS-SEEEEEEESSC
T ss_pred CCCCEEEEeCCCch--------------------hHHHHH---HHcC-CEEEEeC-CCHHHHHHhccc-CceEEEEcCCC
Confidence 22266777766331 222222 2233 2334444 667777776542 22222332233
Q ss_pred Ccc---cccHHHHHHHHHcCCeEEEeccCCC
Q 035739 207 HPV---WQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 207 ~~~---~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
|+. .... +.++|+++|+.++.-...+.
T Consensus 165 nptG~~~~~~-l~~~~~~~~~~li~De~~~~ 194 (370)
T 2z61_A 165 NPLGEVIDRE-IYEFAYENIPYIISDEIYNG 194 (370)
T ss_dssp TTTCCCCCHH-HHHHHHHHCSEEEEECTTTT
T ss_pred CCcCcccCHH-HHHHHHHcCCEEEEEcchhh
Confidence 332 1224 89999999999988665543
No 150
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=33.27 E-value=81 Score=23.66 Aligned_cols=64 Identities=14% Similarity=0.093 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEE
Q 035739 159 YRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTA 228 (335)
Q Consensus 159 ~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a 228 (335)
...++..|....+.|++. .|+ .+...+++......+++--..++..-...+..+|+++||+++-
T Consensus 16 ~~kil~~L~lA~kagklv-~G~-----~~v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~ 79 (122)
T 3o85_A 16 SLELLNLVKHGASLQAIK-RGA-----NEALKQVNRGKAELVIIAADADPIEIVLHLPLACEDKGVPYVF 79 (122)
T ss_dssp HHHHHHHHHHHHHTTCEE-ESH-----HHHHHHHHTTCCSEEEEETTCSSGGGGTTHHHHHHTTTCCEEE
T ss_pred HHHHHHHHHHHHHhCCEe-EcH-----HHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEE
Confidence 445778888888999864 454 6777888877776677766666654345678899999999654
No 151
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=33.17 E-value=2.7e+02 Score=25.09 Aligned_cols=145 Identities=10% Similarity=0.063 Sum_probs=83.9
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCC-cCCHHH--HHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAM-YGTEKA--LGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 123 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~-Ygse~~--lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~ 123 (335)
+.++..+.++.+.+.|++.|=.=.. ...+.- .=+++++. --+++-|..-... .++++... +.++.
T Consensus 164 ~~~~~~~~~~~~~~~G~~~~Kikvg~~~~~~d~~~v~avR~~-------~G~~~~l~vDaN~-~~~~~~A~----~~~~~ 231 (388)
T 4h83_A 164 PLGSIADEMHNYQELGLAGVKFKVGGLSAAEDAARITAAREA-------AGDDFIICIDANQ-GYKPAVAV----DLSRR 231 (388)
T ss_dssp TTCSHHHHHHHHHHHTBSEEEEECSSSCHHHHHHHHHHHHHH-------HCSSSEEEEECTT-CBCHHHHH----HHHHH
T ss_pred CHHHHHHHHHHHHHcCCceEeecCCCCCHHHHHHHHHHHHHh-------cCCCeEEEEecCc-CCCHHHHH----HHHHH
Confidence 3345566778888999998754321 121221 12445553 2244555444322 23333322 33444
Q ss_pred hCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCccc
Q 035739 124 LQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSIN 202 (335)
Q Consensus 124 Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~ 202 (335)
| +..++.++-.|... .+-++.+.++++...|. +.|=+.++..++.++++.... .++
T Consensus 232 l--~~~~~~~iEeP~~~-------------------~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~--d~i 288 (388)
T 4h83_A 232 I--ADLNIRWFEEPVEW-------------------HNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAI--DVC 288 (388)
T ss_dssp T--TTSCCCCEESCBCS-------------------TTHHHHHHHHHHHSSSCEEECTTCSSHHHHHHHHHHTCC--SEE
T ss_pred h--hhcCcceeecCccc-------------------ccchHHHHHHHhhcCCCccCCccccChHhHHHHHHcCCC--CeE
Confidence 4 34567778777431 12356677777776654 667788899999999887654 466
Q ss_pred cCCCCcc---cccHHHHHHHHHcCCeE
Q 035739 203 QVEMHPV---WQQRKLIEFCKAKGIIV 226 (335)
Q Consensus 203 q~~~~~~---~~~~~~l~~~~~~gi~v 226 (335)
|....-+ ..-.++...|+.+||.+
T Consensus 289 ~~d~~~~GGit~~~kia~~A~~~gv~v 315 (388)
T 4h83_A 289 NFDSSWSGGPTAWLRTAAIATSYDVQM 315 (388)
T ss_dssp CCCGGGTTCHHHHHHHHHHHHHTTCEE
T ss_pred eecceeCCCHHHHHHHHHHHHHCCCEE
Confidence 6554332 12267889999999875
No 152
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=32.96 E-value=2.4e+02 Score=24.40 Aligned_cols=104 Identities=10% Similarity=0.044 Sum_probs=63.3
Q ss_pred hhhHHHHHHHHHHHhCCCccceEEee-cCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCccHHHH
Q 035739 110 RDHVIPALKKSLSALQMEYLDLYLVH-WPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSRKKI 188 (335)
Q Consensus 110 ~~~i~~~~e~sL~~Lg~d~iDl~~lH-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l 188 (335)
.+.+.+..+ .+-.-|-|.||+---. +|..... ........+...++.+++.+. -|.|-++.++.+
T Consensus 28 ~~~a~~~a~-~~v~~GAdiIDIGgestrpga~~v-----------~~~eE~~Rv~pvi~~l~~~~~--piSIDT~~~~va 93 (280)
T 1eye_A 28 LDDAVKHGL-AMAAAGAGIVDVGGESSRPGATRV-----------DPAVETSRVIPVVKELAAQGI--TVSIDTMRADVA 93 (280)
T ss_dssp HHHHHHHHH-HHHHTTCSEEEEECC-------------------------HHHHHHHHHHHHHTTC--CEEEECSCHHHH
T ss_pred HHHHHHHHH-HHHHCCCCEEEECCccCCCCCCCC-----------CHHHHHHHHHHHHHHhhcCCC--EEEEeCCCHHHH
Confidence 344444332 2334588999988422 2211100 002236678888888887743 489999999999
Q ss_pred HHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEecc
Q 035739 189 ETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSP 231 (335)
Q Consensus 189 ~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~p 231 (335)
+++++... ..+|-+. ......++++.++++|.+++.+..
T Consensus 94 ~aAl~aGa--~iINdvs--g~~~d~~m~~~~a~~~~~vVlmh~ 132 (280)
T 1eye_A 94 RAALQNGA--QMVNDVS--GGRADPAMGPLLAEADVPWVLMHW 132 (280)
T ss_dssp HHHHHTTC--CEEEETT--TTSSCTTHHHHHHHHTCCEEEECC
T ss_pred HHHHHcCC--CEEEECC--CCCCCHHHHHHHHHhCCeEEEEcC
Confidence 99999632 3344332 222346799999999999999864
No 153
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=32.67 E-value=2.2e+02 Score=25.93 Aligned_cols=65 Identities=17% Similarity=0.199 Sum_probs=43.1
Q ss_pred HHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCccccCCCCc--ccccHHHHHHHHHcCCeEEEe
Q 035739 163 WEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSINQVEMHP--VWQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 163 ~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~--~~~~~~~l~~~~~~gi~v~a~ 229 (335)
++.+.++++.-.|. ..|=+-++...+.++++.... .++|+...- +..-.++...|+++|+.++..
T Consensus 251 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~v~~k~~~GGit~~~~ia~~A~~~gi~~~~h 318 (409)
T 3go2_A 251 PQGLAYVRNHSPHPISSCETLFGIREFKPFFDANAV--DVAIVDTIWNGVWQSMKIAAFADAHDINVAPH 318 (409)
T ss_dssp HHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCC--SEEEECHHHHCHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCC--CEEEeCCCCCCHHHHHHHHHHHHHcCCEEeec
Confidence 45677787776665 344455678888888886544 455554432 111257899999999999864
No 154
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=31.55 E-value=1.3e+02 Score=22.73 Aligned_cols=63 Identities=8% Similarity=-0.002 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHc----CCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEe
Q 035739 161 GVWEAMEESQML----GLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 161 ~~~~~L~~l~~~----Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~ 229 (335)
++-.+|+++.+. |++. .|+ .+...+++......+++--..++......+-.+|+++||+++-.
T Consensus 7 ~i~~~l~~~L~~A~~~gkl~-~G~-----~~v~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v 73 (126)
T 2xzm_U 7 QLNEVLAKVIKSSNCQDAIS-KGL-----HEVLRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSV 73 (126)
T ss_dssp HHHHHHHHHHTTTTSSSCEE-ESH-----HHHHHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEE
T ss_pred cHHHHHHHHHHHHHHcCCEe-ecH-----HHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEE
Confidence 445556666555 7763 444 67777888777777777666666555567889999999999854
No 155
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=31.40 E-value=2.6e+02 Score=24.26 Aligned_cols=149 Identities=11% Similarity=0.062 Sum_probs=74.4
Q ss_pred hHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCC
Q 035739 48 TDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQME 127 (335)
Q Consensus 48 ~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d 127 (335)
...+.+.+..+++.|....-. .....++.+.+.+.... |+....+++++++= -..+++..++.+- +
T Consensus 38 ~~~v~~a~~~~~~~~~~~y~~-~~~~lr~~la~~~~~~~--~~~~~~~~i~~t~g----------~~~a~~~~~~~~~-~ 103 (377)
T 3fdb_A 38 CPAVLQAITDAVQREAFGYQP-DGSLLSQATAEFYADRY--GYQARPEWIFPIPD----------VVRGLYIAIDHFT-P 103 (377)
T ss_dssp CHHHHHHHHHHHHTTCCSSCC-SSCCHHHHHHHHHHHHH--CCCCCGGGEEEESC----------HHHHHHHHHHHHS-C
T ss_pred CHHHHHHHHHHHHcCCCCCCC-CCHHHHHHHHHHHHHHh--CCCCCHHHEEEeCC----------hHHHHHHHHHHhc-C
Confidence 456778888888887543322 11113555556655321 22115667776521 2333444444442 2
Q ss_pred ccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecC-ccHHHHHHHHHhcCCCCccccCCC
Q 035739 128 YLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSN-FSRKKIETILTFATIPPSINQVEM 206 (335)
Q Consensus 128 ~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~-~~~~~l~~~~~~~~~~~~~~q~~~ 206 (335)
.=|-+++..|.. ......++.+ ..++..+-+.. .+.+.++++++.. ....++..+-
T Consensus 104 ~gd~vl~~~~~~--------------------~~~~~~~~~~--g~~~~~~~~~~~~d~~~l~~~l~~~-~~~v~i~~p~ 160 (377)
T 3fdb_A 104 AQSKVIVPTPAY--------------------PPFFHLLSAT--QREGIFIDATGGINLHDVEKGFQAG-ARSILLCNPY 160 (377)
T ss_dssp TTCCEEEEESCC--------------------THHHHHHHHH--TCCEEEEECTTSCCHHHHHHHHHTT-CCEEEEESSB
T ss_pred CCCEEEEcCCCc--------------------HhHHHHHHHc--CCEEEEccCCCCCCHHHHHHHhccC-CCEEEEeCCC
Confidence 225566665532 1222222221 23444443321 3677787777643 2233333333
Q ss_pred Cccc---c---cHHHHHHHHHcCCeEEEeccCC
Q 035739 207 HPVW---Q---QRKLIEFCKAKGIIVTAYSPLG 233 (335)
Q Consensus 207 ~~~~---~---~~~~l~~~~~~gi~v~a~~pl~ 233 (335)
|+.- . -.++.++|+++|+.++.=...+
T Consensus 161 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~ 193 (377)
T 3fdb_A 161 NPLGMVFAPEWLNELCDLAHRYDARVLVDEIHA 193 (377)
T ss_dssp TTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTG
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccc
Confidence 3321 1 1567888999999988765554
No 156
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=31.24 E-value=49 Score=29.16 Aligned_cols=62 Identities=15% Similarity=0.026 Sum_probs=42.5
Q ss_pred ccCCcceeeCcccCccccccCCC---ChHHHHHHHHHHHHc-CCCEeeCCCCcC---CHHHHHHHHHHH
Q 035739 24 LNMPVIGLGCAVDKCLRCAVDKS---DTDALKLVVLEAIKL-GYRHFDTAAMYG---TEKALGEAIAEA 85 (335)
Q Consensus 24 ~~vs~lg~G~~~~~~~~~~~~~~---~~~~~~~~l~~A~~~-Gin~~DtA~~Yg---se~~lG~~l~~~ 85 (335)
..-|+.|+|+|.+++........ +.....+.++.+-+. |+..++....+. .-+.+.+.+++.
T Consensus 5 ~~~~~~~~~~w~~~~~~~~f~~~g~~~~~~~~e~l~~aa~~~G~~~VEl~~~~~~~~~~~~l~~~l~~~ 73 (333)
T 3ktc_A 5 YNYPEFGAGLWHFANYIDRYAVDGYGPALSTIDQINAAKEVGELSYVDLPYPFTPGVTLSEVKDALKDA 73 (333)
T ss_dssp CCCCCEEEEGGGGSCCCCSSSTTCSSCCCCHHHHHHHHHHHSSEEEEEEEESCSTTCCHHHHHHHHHHH
T ss_pred cCCCcceeeeeeeecccccccCCCCCCCCCHHHHHHHHHHhCCCCEEEecCCCcchhHHHHHHHHHHHc
Confidence 45688999999998743322110 234567889999999 999998764442 455667777765
No 157
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=31.01 E-value=58 Score=24.14 Aligned_cols=64 Identities=13% Similarity=0.093 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEe
Q 035739 159 YRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 159 ~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~ 229 (335)
.+.+...|.-..+.|++. .| ..+....++......+++--..++ ....++..+|..++|+++-+
T Consensus 11 ~~~i~~~L~la~kagk~~-~G-----~~~t~kai~~gkakLVilA~D~~~-~~~~~i~~~c~~~~ipv~~~ 74 (112)
T 3iz5_f 11 GENINNKLQLVMKSGKYT-LG-----YKTVLKTLRSSLGKLIILANNCPP-LRKSEIETYAMLAKISVHHF 74 (112)
T ss_dssp GGHHHHHHHHHHTTCEEE-ES-----HHHHHHHHHTTCCSEEEECSCCCH-HHHHHHHHHHHHTTCCEECC
T ss_pred HHHHHHHHHHHHHhCCee-EC-----HHHHHHHHHcCCceEEEEeCCCCH-HHHHHHHHHHHHcCCcEEEe
Confidence 567888899999999863 34 367778888777777777767765 34477889999999999987
No 158
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=30.81 E-value=73 Score=22.83 Aligned_cols=61 Identities=13% Similarity=0.075 Sum_probs=40.1
Q ss_pred HHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEe
Q 035739 162 VWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 162 ~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~ 229 (335)
+...|...++.|++. .|+ .+...+++......+++--.. +.+....+..+|++++|+++.+
T Consensus 4 i~~~L~la~kagkl~-~G~-----~~v~kai~~gka~lViiA~D~-~~~~~~~l~~~c~~~~vp~~~~ 64 (101)
T 1w41_A 4 FAFELRKAQDTGKIV-MGA-----RKSIQYAKMGGAKLIIVARNA-RPDIKEDIEYYARLSGIPVYEF 64 (101)
T ss_dssp HHHHHHHHHHHSEEE-ESH-----HHHHHHHHHTCCSEEEEETTS-CHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHcCCEe-ECH-----HHHHHHHHcCCCcEEEEeCCC-CHHHHHHHHHHHHhcCCCEEEe
Confidence 456677777778764 343 677777777665555554442 2233366788899999998765
No 159
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=30.68 E-value=2.3e+02 Score=27.69 Aligned_cols=77 Identities=13% Similarity=0.169 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHcCCCEeeC--C-----------------CCcC-C-H---HHHHHHHHHHHHcCCCCCCCceEEeeccCC
Q 035739 50 ALKLVVLEAIKLGYRHFDT--A-----------------AMYG-T-E---KALGEAIAEALRLGLVSSREQLFITSKLWC 105 (335)
Q Consensus 50 ~~~~~l~~A~~~Gin~~Dt--A-----------------~~Yg-s-e---~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~ 105 (335)
+..+.-++|.++|+..++. | +.|| + | +++-+.++.. .+- --+++.|..|+..
T Consensus 142 ~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~av-r~~---vG~~~~v~vrls~ 217 (671)
T 1ps9_A 142 NFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAV-RER---VGNDFIIIYRLSM 217 (671)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHH-HHH---HCSSSEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHH-HHH---cCCCceEEEEECc
Confidence 3444556667899998875 2 3466 2 2 1222222221 011 2346778888754
Q ss_pred CC-----CChhhHHHHHHHHHHHhCCCccce
Q 035739 106 QN-----AHRDHVIPALKKSLSALQMEYLDL 131 (335)
Q Consensus 106 ~~-----~~~~~i~~~~e~sL~~Lg~d~iDl 131 (335)
.+ .+.+.. ..+-+.|+..|+||+++
T Consensus 218 ~~~~~~g~~~~~~-~~~a~~l~~~g~d~i~v 247 (671)
T 1ps9_A 218 LDLVEDGGTFAET-VELAQAIEAAGATIINT 247 (671)
T ss_dssp ECCSTTCCCHHHH-HHHHHHHHHHTCSEEEE
T ss_pred cccCCCCCCHHHH-HHHHHHHHhcCCCEEEc
Confidence 32 233332 34456678889888765
No 160
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=30.68 E-value=3e+02 Score=24.84 Aligned_cols=153 Identities=12% Similarity=0.116 Sum_probs=90.6
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCC---cCCHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAM---YGTEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 123 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~---Ygse~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~ 123 (335)
+.++..+.++.+++.|++.|=.=-. -..+...=+++++. + + ++-|..-.. ...+.+... +.+++
T Consensus 144 ~~e~~~~~a~~~~~~G~~~iKlKvg~~~~~~d~~~v~avR~~----~--~--~~~L~vDaN-~~w~~~~A~----~~~~~ 210 (389)
T 3s5s_A 144 SPERAEEAARRAAAMGFRALKVKVGGRLAASDPARIEAIHAA----A--P--GASLILDGN-GGLTAGEAL----ALVAH 210 (389)
T ss_dssp CSHHHHHHHHHHHHHTCCEEEEECCGGGTTTHHHHHHHHHHH----C--T--TCEEEEECT-TCSCHHHHH----HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCChHHHHHHHHHHHHh----C--C--CCeEEEECC-CCCCHHHHH----HHHHH
Confidence 5567777888889999998743211 11222233556664 1 2 233333332 223333322 23445
Q ss_pred hCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCccc
Q 035739 124 LQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSIN 202 (335)
Q Consensus 124 Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~ 202 (335)
|..+..++.++-.|... +-++.+.++.+.-.|. +.|=+.++...+.++++.... .++
T Consensus 211 L~~~~~~i~~iEeP~~~--------------------~d~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~--d~v 268 (389)
T 3s5s_A 211 ARRLGADVALLEQPVPR--------------------DDWDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAA--TVV 268 (389)
T ss_dssp HHHTTCEEEEEECCSCT--------------------TCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCC--SEE
T ss_pred HhhCCCCeEEEECCCCc--------------------ccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCC--CEE
Confidence 52134588899988542 1245666676654443 677788888999998886543 455
Q ss_pred cCCCCc--ccccHHHHHHHHHcCCeEEEeccCCC
Q 035739 203 QVEMHP--VWQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 203 q~~~~~--~~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
|+.... +..-.++...|+++|+.++..+.+.+
T Consensus 269 ~~k~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 302 (389)
T 3s5s_A 269 NIKLMKGGIAEALDIAAVARAAGLGLMIGGMVES 302 (389)
T ss_dssp EECHHHHHHHHHHHHHHHHHHTTCEEEECCSSCC
T ss_pred EecCCCCCHHHHHHHHHHHHHcCCeEEecCCccc
Confidence 555433 11125688999999999998777654
No 161
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=30.68 E-value=97 Score=23.17 Aligned_cols=20 Identities=20% Similarity=0.150 Sum_probs=16.3
Q ss_pred cHHHHHHHHHcCCeEEEeccC
Q 035739 212 QRKLIEFCKAKGIIVTAYSPL 232 (335)
Q Consensus 212 ~~~~l~~~~~~gi~v~a~~pl 232 (335)
+.++.+.|+++||.++. ..+
T Consensus 94 ~~e~~~~a~~~Girvv~-nC~ 113 (122)
T 3ff4_A 94 NEELEEILSENGIEPVI-GCT 113 (122)
T ss_dssp CHHHHHHHHHTTCEEEE-SCH
T ss_pred hHHHHHHHHHcCCeEEC-CcC
Confidence 57899999999999885 444
No 162
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=30.50 E-value=2.9e+02 Score=24.60 Aligned_cols=62 Identities=21% Similarity=0.181 Sum_probs=36.7
Q ss_pred cCCccEEEecC----ccHHHHHHHHHhcCCCCccccCCCCccc---c---cHHHHHHHHHcCCeEEEeccCC
Q 035739 172 LGLTKSIGLSN----FSRKKIETILTFATIPPSINQVEMHPVW---Q---QRKLIEFCKAKGIIVTAYSPLG 233 (335)
Q Consensus 172 ~Gkir~iGvs~----~~~~~l~~~~~~~~~~~~~~q~~~~~~~---~---~~~~l~~~~~~gi~v~a~~pl~ 233 (335)
..++..+-+.. .+.+.++++++..+.+.+++-.+-|+.- . -.++.+.|+++|+.++.=.+.+
T Consensus 154 g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~ 225 (437)
T 3g0t_A 154 GQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYF 225 (437)
T ss_dssp TCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred CCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchh
Confidence 35666666542 2566777777434444333333334432 1 1568999999999998865554
No 163
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=29.98 E-value=3.3e+02 Score=25.06 Aligned_cols=148 Identities=11% Similarity=0.100 Sum_probs=88.3
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCC--C----cC---CHH------HHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChh
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAA--M----YG---TEK------ALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRD 111 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~--~----Yg---se~------~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~ 111 (335)
+.++..+..+.+++.|++.|..=. . +| .+. .+=+++|+. --+++-|...... ..+.+
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~a-------vG~d~~L~vDan~-~~t~~ 217 (433)
T 3rcy_A 146 SADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAA-------VGDKADLLFGTHG-QFTTA 217 (433)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHH-------HTTSSEEEECCCS-CBCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHH-------hCCCCeEEEeCCC-CCCHH
Confidence 677888888999999999987521 1 23 111 122345543 1245566666532 23333
Q ss_pred hHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHH
Q 035739 112 HVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIET 190 (335)
Q Consensus 112 ~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~ 190 (335)
...+ +-+.|+.+++ .++..|... +-++.+.++++.-.|- ..|=+-++..++.+
T Consensus 218 ~A~~-~~~~Le~~~i-----~~iEeP~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ 271 (433)
T 3rcy_A 218 GAIR-LGQAIEPYSP-----LWYEEPVPP--------------------DNVGAMAQVARAVRIPVATGERLTTKAEFAP 271 (433)
T ss_dssp HHHH-HHHHHGGGCC-----SEEECCSCT--------------------TCHHHHHHHHHHSSSCEEECTTCCSHHHHHH
T ss_pred HHHH-HHHHhhhcCC-----CEEECCCCh--------------------hhHHHHHHHHhccCCCEEecCCCCCHHHHHH
Confidence 3222 2344555554 456666321 1256677777765554 45556677889999
Q ss_pred HHHhcCCCCccccCCCCcc---cccHHHHHHHHHcCCeEEEec
Q 035739 191 ILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYS 230 (335)
Q Consensus 191 ~~~~~~~~~~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~ 230 (335)
+++.... +++|....-+ ..-.++..+|+++|+.+...+
T Consensus 272 ~l~~g~~--D~v~~d~~~~GGit~~~kia~lA~~~gv~~~~h~ 312 (433)
T 3rcy_A 272 VLREGAA--AILQPALGRAGGIWEMKKVAAMAEVYNAQMAPHL 312 (433)
T ss_dssp HHHTTCC--SEECCCHHHHTHHHHHHHHHHHHHTTTCEECCCC
T ss_pred HHHcCCC--CEEEeCchhcCCHHHHHHHHHHHHHcCCEEEecC
Confidence 9886543 4666554432 222678999999999988765
No 164
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=29.84 E-value=1.6e+02 Score=25.26 Aligned_cols=77 Identities=16% Similarity=0.181 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHcCCCEeeCCCCcC--CHHHHHHHHHHHHHcCCCCCCCceEEeeccCCC------CCChhhHHHHHHHHH
Q 035739 50 ALKLVVLEAIKLGYRHFDTAAMYG--TEKALGEAIAEALRLGLVSSREQLFITSKLWCQ------NAHRDHVIPALKKSL 121 (335)
Q Consensus 50 ~~~~~l~~A~~~Gin~~DtA~~Yg--se~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~------~~~~~~i~~~~e~sL 121 (335)
.+.+.++.|-+.|+++++.++..- +++..-++++.. .+..+.+.+-++.. ..++....+.+++-|
T Consensus 86 ~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~-------~~~G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~L 158 (251)
T 1qwg_A 86 KFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRA-------KDNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFDL 158 (251)
T ss_dssp CHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHH-------HHTTCEEEEEECCSSHHHHTTCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHH-------HHCCCEEeeeccccCCcccCCCCHHHHHHHHHHHH
Confidence 467788888899999999998887 676667777765 34446666666543 335677777777777
Q ss_pred HHhCCCccceEEeecC
Q 035739 122 SALQMEYLDLYLVHWP 137 (335)
Q Consensus 122 ~~Lg~d~iDl~~lH~p 137 (335)
+. |. |.+++-.-
T Consensus 159 eA-GA---~~ViiEar 170 (251)
T 1qwg_A 159 DA-GA---DYVIIEGR 170 (251)
T ss_dssp HH-TC---SEEEECCT
T ss_pred HC-CC---cEEEEeee
Confidence 66 64 55777653
No 165
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=29.73 E-value=76 Score=23.80 Aligned_cols=63 Identities=16% Similarity=0.153 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEE
Q 035739 160 RGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTA 228 (335)
Q Consensus 160 ~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a 228 (335)
..+.+.|....+.|++. .|+ .+...+++......+++--..++......+..+|+++||+++-
T Consensus 14 ~~i~~~L~lA~kagkl~-~G~-----~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~ 76 (124)
T 2fc3_A 14 EKAYEAVKRARETGRIK-KGT-----NETTKAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVY 76 (124)
T ss_dssp HHHHHHHHHHHHHSEEE-ESH-----HHHHHHHHTTCCSEEEEETTCSSGGGTTTHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHhCCcc-CCH-----HHHHHHHHcCCceEEEEcCCCChHHHHHHHHHHHHHcCCCEEE
Confidence 34666777777778764 343 6777888877766666666666654446678899999998643
No 166
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=28.64 E-value=1.2e+02 Score=24.42 Aligned_cols=60 Identities=17% Similarity=0.245 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHcCCccEEEecC-ccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEE
Q 035739 160 RGVWEAMEESQMLGLTKSIGLSN-FSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTA 228 (335)
Q Consensus 160 ~~~~~~L~~l~~~Gkir~iGvs~-~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a 228 (335)
.+.++.+.+.. ++-..||+++ .+.+++.++.+ .+.++. +++.. ..++++.|++.|+.+++
T Consensus 49 ~~~i~~ir~~~--~~~~~ig~~~v~~~~~~~~a~~-~Gad~i-----v~~~~-~~~~~~~~~~~g~~vi~ 109 (205)
T 1wa3_A 49 DTVIKELSFLK--EKGAIIGAGTVTSVEQCRKAVE-SGAEFI-----VSPHL-DEEISQFCKEKGVFYMP 109 (205)
T ss_dssp HHHHHHTHHHH--HTTCEEEEESCCSHHHHHHHHH-HTCSEE-----ECSSC-CHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHHHHC--CCCcEEEecccCCHHHHHHHHH-cCCCEE-----EcCCC-CHHHHHHHHHcCCcEEC
Confidence 33444444433 2223588844 77888877776 333333 12222 26799999999999986
No 167
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=28.19 E-value=3.1e+02 Score=24.17 Aligned_cols=127 Identities=14% Similarity=0.093 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHcCCCEeeC--C-----------------CCcC-C-H---HHHHHHHHHHHHcCCCCCCCceEEeeccCC
Q 035739 50 ALKLVVLEAIKLGYRHFDT--A-----------------AMYG-T-E---KALGEAIAEALRLGLVSSREQLFITSKLWC 105 (335)
Q Consensus 50 ~~~~~l~~A~~~Gin~~Dt--A-----------------~~Yg-s-e---~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~ 105 (335)
+..+.-+.|.++|+..++. + +.|| + | +.+-+.++...+ . - ++-|..|+..
T Consensus 145 ~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~-~---v--~~pv~vris~ 218 (338)
T 1z41_A 145 EFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQ-V---W--DGPLFVRVSA 218 (338)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHH-H---C--CSCEEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHH-H---c--CCcEEEEecC
Confidence 3445556677899998872 2 3466 3 1 222333332210 1 2 4557778755
Q ss_pred CC-----CChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEe
Q 035739 106 QN-----AHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGL 180 (335)
Q Consensus 106 ~~-----~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGv 180 (335)
.+ .+.+. ...+-+.|+..|+|||++ |....... ..+ ... ...++.+.++++.=.+--++.
T Consensus 219 ~~~~~~g~~~~~-~~~~a~~l~~~Gvd~i~v---~~~~~~~~---~~~-----~~~---~~~~~~~~~ir~~~~iPVi~~ 283 (338)
T 1z41_A 219 SDYTDKGLDIAD-HIGFAKWMKEQGVDLIDC---SSGALVHA---DIN-----VFP---GYQVSFAEKIREQADMATGAV 283 (338)
T ss_dssp CCCSTTSCCHHH-HHHHHHHHHHTTCCEEEE---ECCCSSCC---CCC-----CCT---TTTHHHHHHHHHHHCCEEEEC
T ss_pred cccCCCCCCHHH-HHHHHHHHHHcCCCEEEE---ecCccccC---CCC-----CCc---cchHHHHHHHHHHCCCCEEEE
Confidence 32 22333 234556677888777665 43211100 000 000 012344455555446677888
Q ss_pred cCc-cHHHHHHHHHhcCC
Q 035739 181 SNF-SRKKIETILTFATI 197 (335)
Q Consensus 181 s~~-~~~~l~~~~~~~~~ 197 (335)
... +++..+++++....
T Consensus 284 Ggi~s~~~a~~~l~~G~a 301 (338)
T 1z41_A 284 GMITDGSMAEEILQNGRA 301 (338)
T ss_dssp SSCCSHHHHHHHHHTTSC
T ss_pred CCCCCHHHHHHHHHcCCc
Confidence 887 68888888886543
No 168
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=27.94 E-value=1.5e+02 Score=24.63 Aligned_cols=33 Identities=12% Similarity=0.094 Sum_probs=24.8
Q ss_pred cceeeCcccCccccccCCCChHHHHHHHHHHHHcCCCEeeCCC
Q 035739 28 VIGLGCAVDKCLRCAVDKSDTDALKLVVLEAIKLGYRHFDTAA 70 (335)
Q Consensus 28 ~lg~G~~~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~ 70 (335)
+||+-++.+.. ....+.++.+-+.|++.++...
T Consensus 11 klg~~~~~~~~----------~~~~~~l~~~~~~G~~~vEl~~ 43 (262)
T 3p6l_A 11 RLGMQSYSFHL----------FPLTEALDKTQELGLKYIEIYP 43 (262)
T ss_dssp EEEEEGGGGTT----------SCHHHHHHHHHHTTCCEEEECT
T ss_pred EEEEEecccCC----------CCHHHHHHHHHHcCCCEEeecC
Confidence 36777777642 2367788999999999999874
No 169
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=27.93 E-value=81 Score=23.42 Aligned_cols=64 Identities=13% Similarity=0.083 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEE
Q 035739 159 YRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTA 228 (335)
Q Consensus 159 ~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a 228 (335)
...+.+.|....+.|++. .|+ .+...+++......+++--..++......+..+|+++||+++-
T Consensus 12 ~~~i~~~L~lA~kag~l~-~G~-----~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~ 75 (119)
T 1rlg_A 12 QNEALSLLEKVRESGKVK-KGT-----NETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIY 75 (119)
T ss_dssp HHHHHHHHHHHHHHSEEE-ESH-----HHHHHHHTTTCCSEEEEESCCSCSTTTTHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHhCCee-ECH-----HHHHHHHHcCCCcEEEEeCCCChHHHHHHHHHHHHHcCCCEEE
Confidence 345667777777888764 443 6777788877666666666666654446788899999998643
No 170
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=27.84 E-value=3.6e+02 Score=24.84 Aligned_cols=67 Identities=12% Similarity=0.136 Sum_probs=46.3
Q ss_pred HHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCccccCCCCcc---cccHHHHHHHHHcCCeEEEecc
Q 035739 163 WEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSP 231 (335)
Q Consensus 163 ~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~p 231 (335)
++.+.++++.-.|. ..|=+-++..++.++++.... .++|+...-+ ..-.++...|+++|+.++..+.
T Consensus 280 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~--d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 350 (440)
T 3t6c_A 280 TEWLKMLRQQSSTPIAMGELFVNVNEWKPLIDNKLI--DYIRCHISSIGGITPAKKIAIYSELNGVRTAWHSP 350 (440)
T ss_dssp GGGHHHHHHHCCSCEEECTTCCSHHHHHHHHHTTCC--SEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCS
T ss_pred HHHHHHHHhhcCCCEEeCcccCCHHHHHHHHHcCCc--cceeechhhhCCHHHHHHHHHHHHHcCCEEEeccC
Confidence 45667777665554 556677788899999886543 4666655443 2236789999999999877655
No 171
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=27.57 E-value=3.2e+02 Score=24.09 Aligned_cols=98 Identities=12% Similarity=0.066 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHc-CCccEEEecCccHHHHHHH
Q 035739 113 VIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQML-GLTKSIGLSNFSRKKIETI 191 (335)
Q Consensus 113 i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~-Gkir~iGvs~~~~~~l~~~ 191 (335)
-+..+-+.|.++|+++|.+- +|.. ..+-|+.+.++++. ..++..+++.-....++.+
T Consensus 29 ~Kl~ia~~L~~~Gv~~IE~g---~p~~-------------------~~~d~e~v~~i~~~~~~~~i~~l~r~~~~~i~~a 86 (325)
T 3eeg_A 29 EKIIVAKALDELGVDVIEAG---FPVS-------------------SPGDFNSVVEITKAVTRPTICALTRAKEADINIA 86 (325)
T ss_dssp HHHHHHHHHHHHTCSEEEEE---CTTS-------------------CHHHHHHHHHHHHHCCSSEEEEECCSCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEe---CCCC-------------------CHhHHHHHHHHHHhCCCCEEEEeecCCHHHHHHH
Confidence 34555666889999999986 2321 12345566666654 4566777765566777766
Q ss_pred HHh---cCCCCccccCCCCccc---------c-----cHHHHHHHHHcCCeEEEeccC
Q 035739 192 LTF---ATIPPSINQVEMHPVW---------Q-----QRKLIEFCKAKGIIVTAYSPL 232 (335)
Q Consensus 192 ~~~---~~~~~~~~q~~~~~~~---------~-----~~~~l~~~~~~gi~v~a~~pl 232 (335)
++. ++.+.+.+-...|... . -.+.+++|+++|+.+.-.-+.
T Consensus 87 ~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d 144 (325)
T 3eeg_A 87 GEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCED 144 (325)
T ss_dssp HHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEET
T ss_pred HHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 665 2322111111111111 1 157889999999987644443
No 172
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=27.45 E-value=3.1e+02 Score=23.94 Aligned_cols=64 Identities=11% Similarity=0.128 Sum_probs=45.0
Q ss_pred HHHHHHHHHHc-CCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEecc
Q 035739 162 VWEAMEESQML-GLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSP 231 (335)
Q Consensus 162 ~~~~L~~l~~~-Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~p 231 (335)
+...++.+++. +. -|.|-++.++.++++++. +. ..+| ..+......++++.++++|.+++.+..
T Consensus 103 vvpvI~~l~~~~~v--piSIDT~~~~V~~aAl~a-Ga-~iIN--dvsg~~~d~~m~~~aa~~g~~vVlmh~ 167 (297)
T 1tx2_A 103 VVPMIQAVSKEVKL--PISIDTYKAEVAKQAIEA-GA-HIIN--DIWGAKAEPKIAEVAAHYDVPIILMHN 167 (297)
T ss_dssp HHHHHHHHHHHSCS--CEEEECSCHHHHHHHHHH-TC-CEEE--ETTTTSSCTHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHhcCCc--eEEEeCCCHHHHHHHHHc-CC-CEEE--ECCCCCCCHHHHHHHHHhCCcEEEEeC
Confidence 44455666654 43 489999999999999997 32 2333 333333356899999999999999865
No 173
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=27.43 E-value=3.3e+02 Score=24.27 Aligned_cols=153 Identities=15% Similarity=0.105 Sum_probs=89.3
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcC---CHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYG---TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 123 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg---se~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~ 123 (335)
+.++..+.++.+++.|++.|-.=-.-. .+...=+++++. + +.-++.| -.. ..++.+... +.+++
T Consensus 143 ~~e~~~~~a~~~~~~G~~~iK~Kvg~~~~~~d~~~v~avr~~----~--~~~~l~v--DaN-~~~~~~~A~----~~~~~ 209 (365)
T 3ik4_A 143 DEVHAAASAKAILARGIKSIKVKTAGVDVAYDLARLRAIHQA----A--PTAPLIV--DGN-CGYDVERAL----AFCAA 209 (365)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCSSCHHHHHHHHHHHHHH----S--SSCCEEE--ECT-TCCCHHHHH----HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHHHHHh----C--CCCeEEE--ECC-CCCCHHHHH----HHHHH
Confidence 567777888888999999875322211 111222445553 1 2223333 321 223333322 33444
Q ss_pred hCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCccc
Q 035739 124 LQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSIN 202 (335)
Q Consensus 124 Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~ 202 (335)
|..+..++.++-.|... +-++.+.++++.-.|. +.|=+.++..++.++++.... .++
T Consensus 210 L~~~~~~i~~iEeP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~--d~v 267 (365)
T 3ik4_A 210 CKAESIPMVLFEQPLPR--------------------EDWAGMAQVTAQSGFAVAADESARSAHDVLRIAREGTA--SVI 267 (365)
T ss_dssp HHHTTCCEEEEECCSCT--------------------TCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCC--SEE
T ss_pred HhhCCCCceEEECCCCc--------------------ccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCC--CEE
Confidence 51133578888887432 1246666777664554 566777888899998886654 355
Q ss_pred cCCCCc--ccccHHHHHHHHHcCCeEEEeccCCC
Q 035739 203 QVEMHP--VWQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 203 q~~~~~--~~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
|+...- +..-.++...|+++|+.++..+.+.+
T Consensus 268 ~ik~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 301 (365)
T 3ik4_A 268 NIKLMKAGVAEGLKMIAIAQAAGLGLMIGGMVES 301 (365)
T ss_dssp EECHHHHCHHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred EEcCCccCHHHHHHHHHHHHHcCCeEEecCCccc
Confidence 554433 11126788999999999999876654
No 174
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=27.34 E-value=3.3e+02 Score=24.17 Aligned_cols=88 Identities=13% Similarity=0.063 Sum_probs=44.2
Q ss_pred CceEEeeccCCCC-----CChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 035739 95 EQLFITSKLWCQN-----AHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEES 169 (335)
Q Consensus 95 ~~~~i~tK~~~~~-----~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l 169 (335)
+++-|..|+...+ .+.+.. ..+-+.|+..|+|||++- ....... ...+ .. . ...++.+.++
T Consensus 218 ~d~pV~vRls~~~~~~~g~~~~~~-~~la~~L~~~Gvd~i~vs---~g~~~~~--~~~~-~~----~---~~~~~~~~~i 283 (349)
T 3hgj_A 218 RELPLFVRVSATDWGEGGWSLEDT-LAFARRLKELGVDLLDCS---SGGVVLR--VRIP-LA----P---GFQVPFADAV 283 (349)
T ss_dssp TTSCEEEEEESCCCSTTSCCHHHH-HHHHHHHHHTTCCEEEEE---CCCSCSS--SCCC-CC----T---TTTHHHHHHH
T ss_pred CCceEEEEeccccccCCCCCHHHH-HHHHHHHHHcCCCEEEEe---cCCcCcc--cccC-CC----c---cccHHHHHHH
Confidence 3555777886532 233333 334556778887776653 2110000 0000 00 0 0123445555
Q ss_pred HHcCCccEEEecCc-cHHHHHHHHHhcC
Q 035739 170 QMLGLTKSIGLSNF-SRKKIETILTFAT 196 (335)
Q Consensus 170 ~~~Gkir~iGvs~~-~~~~l~~~~~~~~ 196 (335)
++.-.+--+++... +++..+++++...
T Consensus 284 r~~~~iPVi~~Ggi~t~e~a~~~l~~G~ 311 (349)
T 3hgj_A 284 RKRVGLRTGAVGLITTPEQAETLLQAGS 311 (349)
T ss_dssp HHHHCCEEEECSSCCCHHHHHHHHHTTS
T ss_pred HHHcCceEEEECCCCCHHHHHHHHHCCC
Confidence 55445666777764 5788888887553
No 175
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=27.19 E-value=3.7e+02 Score=24.65 Aligned_cols=150 Identities=11% Similarity=0.080 Sum_probs=86.8
Q ss_pred ChHHHHHHHHHHHHcCCCEeeC--CC-----CcC----------------------------CHHHHHHHHHHHHHcCCC
Q 035739 47 DTDALKLVVLEAIKLGYRHFDT--AA-----MYG----------------------------TEKALGEAIAEALRLGLV 91 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~Dt--A~-----~Yg----------------------------se~~lG~~l~~~~~~g~~ 91 (335)
+.++..+.++.+++.|++.|=. .. .|| ....+=+++|+.+
T Consensus 150 ~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~a~----- 224 (425)
T 3vcn_A 150 TIEDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLFERAREVL----- 224 (425)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHHHHHHHHH-----
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHHHHHHHHc-----
Confidence 5678888889999999998742 11 121 0111224566542
Q ss_pred CCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 035739 92 SSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQM 171 (335)
Q Consensus 92 ~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~ 171 (335)
-+++-|..... ...+.+...+ +-+.|+.++++ ++..|... +-++.+.++++
T Consensus 225 --G~d~~l~vDaN-~~~~~~~A~~-~~~~L~~~~i~-----~iEqP~~~--------------------~d~~~~~~l~~ 275 (425)
T 3vcn_A 225 --GWDVHLLHDVH-HRLTPIEAAR-LGKDLEPYRLF-----WLEDSVPA--------------------ENQAGFRLIRQ 275 (425)
T ss_dssp --CSSSEEEEECT-TCCCHHHHHH-HHHHHGGGCCS-----EEECCSCC--------------------SSTTHHHHHHH
T ss_pred --CCCCEEEEECC-CCCCHHHHHH-HHHHHHhcCCC-----EEECCCCh--------------------hhHHHHHHHHh
Confidence 23455555553 2333433332 23345565544 45666321 11345666776
Q ss_pred cCCcc-EEEecCccHHHHHHHHHhcCCCCccccCCCCcc---cccHHHHHHHHHcCCeEEEeccC
Q 035739 172 LGLTK-SIGLSNFSRKKIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPL 232 (335)
Q Consensus 172 ~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl 232 (335)
.-.|. ..|=+-++..++.++++.... .++|+...-+ ..-.++...|+++|+.++..+.+
T Consensus 276 ~~~iPIa~dE~~~~~~~~~~~i~~~a~--d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 338 (425)
T 3vcn_A 276 HTTTPLAVGEIFAHVWDAKQLIEEQLI--DYLRATVLHAGGITNLKKIAAFADLHHVKTGCHGAT 338 (425)
T ss_dssp HCCSCEEECTTCCSGGGTHHHHHTTCC--SEECCCTTTTTHHHHHHHHHHHHGGGTCEECCCCCT
T ss_pred cCCCCEEeCCCcCCHHHHHHHHHcCCC--CeEecChhhcCCHHHHHHHHHHHHHcCCEEeeccCC
Confidence 65555 344455667888888886543 4666665543 22267899999999998877654
No 176
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=27.10 E-value=3.5e+02 Score=24.43 Aligned_cols=145 Identities=12% Similarity=0.076 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHcCCCEeeC-CCCc--CC-HH--HHHHHHHHHHHcCCCCCCCceEEeeccCCCCC-ChhhHHHHHHHHHH
Q 035739 50 ALKLVVLEAIKLGYRHFDT-AAMY--GT-EK--ALGEAIAEALRLGLVSSREQLFITSKLWCQNA-HRDHVIPALKKSLS 122 (335)
Q Consensus 50 ~~~~~l~~A~~~Gin~~Dt-A~~Y--gs-e~--~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~-~~~~i~~~~e~sL~ 122 (335)
+..+..+.+++.|++.|=. =-.. .. +. .+=+++|+.+ -+++-|...... .. +.+...+ +-+.|+
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~e~v~avR~a~-------G~d~~l~vDaN~-~~~~~~~A~~-~~~~L~ 230 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVPIKADWSTKEVAYYLRELRGIL-------GHDTDMMVDYLY-RFTDWYEVAR-LLNSIE 230 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTCCCCHHHHHHHHHHHHHHH-------CSSSEEEEECTT-CCCCHHHHHH-HHHHTG
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCCccCHHHHHHHHHHHHHHh-------CCCCeEEEeCCC-CCCCHHHHHH-HHHHhh
Confidence 4555777888999999876 2221 11 11 2224556542 234555555432 23 3333332 223345
Q ss_pred HhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCcc
Q 035739 123 ALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSI 201 (335)
Q Consensus 123 ~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~ 201 (335)
.+| +.++..|... +-++.+.++++.-.|. ..|=+-++..++.++++.... ++
T Consensus 231 ~~~-----i~~iEeP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~--d~ 283 (394)
T 3mkc_A 231 DLE-----LYFAEATLQH--------------------DDLSGHAKLVENTRSRICGAEMSTTRFEAEEWITKGKV--HL 283 (394)
T ss_dssp GGC-----CSEEESCSCT--------------------TCHHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTTCC--SE
T ss_pred hcC-----CeEEECCCCc--------------------hhHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCC--Ce
Confidence 554 4456666321 1245677777765555 445556678888888886543 46
Q ss_pred ccCCCCcc---cccHHHHHHHHHcCCeEEEec
Q 035739 202 NQVEMHPV---WQQRKLIEFCKAKGIIVTAYS 230 (335)
Q Consensus 202 ~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~ 230 (335)
+|+...-+ ..-.++...|+++|+.++..+
T Consensus 284 v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 315 (394)
T 3mkc_A 284 LQSDYNRCGGLTELRRITEMATANNVQVMPHN 315 (394)
T ss_dssp ECCCTTTTTHHHHHHHHHHHHHHTTCEECCCC
T ss_pred EecCccccCCHHHHHHHHHHHHHcCCEEeecC
Confidence 66665543 223678999999999997654
No 177
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=26.94 E-value=3.2e+02 Score=23.89 Aligned_cols=147 Identities=14% Similarity=0.164 Sum_probs=74.5
Q ss_pred hHHHHHHHHHHHHcCCCEeeCCCCcCC-HHH-HHHHHHHHHHc--CCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHH
Q 035739 48 TDALKLVVLEAIKLGYRHFDTAAMYGT-EKA-LGEAIAEALRL--GLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSA 123 (335)
Q Consensus 48 ~~~~~~~l~~A~~~Gin~~DtA~~Ygs-e~~-lG~~l~~~~~~--g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~ 123 (335)
...+.+.+..+++.+.. .|+. ... +-+++.+.+.. |+....+++++++ ....+++..++.
T Consensus 43 ~~~v~~a~~~~~~~~~~------~y~~~~~~~lr~~la~~l~~~~g~~~~~~~v~~t~----------g~~~al~~~~~~ 106 (390)
T 1d2f_A 43 APCIIEALNQRLMHGVF------GYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGP----------SVIYMVSELIRQ 106 (390)
T ss_dssp CHHHHHHHHHHHTTCCC------CCCCSCCHHHHHHHHHHHHHHSCCCCCGGGEEEES----------CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCC------CCCCCChHHHHHHHHHHHHHhcCCCCCHHHEEEcC----------CHHHHHHHHHHH
Confidence 45677788888876543 3331 112 33444444321 4211456776662 233445555555
Q ss_pred hCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC-CccEEEec----C--ccHHHHHHHHHhcC
Q 035739 124 LQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLG-LTKSIGLS----N--FSRKKIETILTFAT 196 (335)
Q Consensus 124 Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~G-kir~iGvs----~--~~~~~l~~~~~~~~ 196 (335)
+- +.=|-+++..|.. ......++ ..| ++..+-+. + .+.+.++++++..+
T Consensus 107 l~-~~gd~vl~~~p~y--------------------~~~~~~~~---~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~ 162 (390)
T 1d2f_A 107 WS-ETGEGVVIHTPAY--------------------DAFYKAIE---GNQRTVMPVALEKQADGWFCDMGKLEAVLAKPE 162 (390)
T ss_dssp SS-CTTCEEEEEESCC--------------------HHHHHHHH---HTTCEEEEEECEECSSSEECCHHHHHHHHTSTT
T ss_pred hc-CCCCEEEEcCCCc--------------------HHHHHHHH---HCCCEEEEeecccCCCccccCHHHHHHHhccCC
Confidence 52 2226666666632 23333332 223 44444442 1 45777877775323
Q ss_pred CCCccccCCCCcc---cc---cHHHHHHHHHcCCeEEEeccCCC
Q 035739 197 IPPSINQVEMHPV---WQ---QRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 197 ~~~~~~q~~~~~~---~~---~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
...+++..+-|+. .. -.++.+.|+++|+.++.-.+.+.
T Consensus 163 ~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~ 206 (390)
T 1d2f_A 163 CKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMD 206 (390)
T ss_dssp EEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred CeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccc
Confidence 2222322333332 11 16789999999999988766653
No 178
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=26.83 E-value=85 Score=23.99 Aligned_cols=65 Identities=9% Similarity=0.044 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEe
Q 035739 159 YRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 159 ~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~ 229 (335)
...+...|...++.|++. .|+ .+...+++......+++--..++......+..+|++++|+++-.
T Consensus 26 ~~ki~~~L~lA~kagklv-~G~-----~~v~kal~~gkaklViiA~D~~~~~~~~~l~~lc~~~~IP~~~v 90 (135)
T 2aif_A 26 NNKIINLVQQACNYKQLR-KGA-----NEATKALNRGIAEIVLLAADAEPLEILLHLPLVCEDKNTPYVFV 90 (135)
T ss_dssp HHHHHHHHHHHHHTTCEE-ESH-----HHHHHHHHTTCEEEEEEETTCSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHcCCcc-cCH-----HHHHHHHHcCCCeEEEEecCCChHHHHhHHHHHHHhcCCcEEEE
Confidence 445778888888899874 444 67777888766555666556665433366788899999998743
No 179
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=26.57 E-value=3.6e+02 Score=24.97 Aligned_cols=148 Identities=10% Similarity=0.060 Sum_probs=87.0
Q ss_pred ChHHHHHHHHHHHHc-CCCEeeCCCCc-CCHHH--HHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKL-GYRHFDTAAMY-GTEKA--LGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 122 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~-Gin~~DtA~~Y-gse~~--lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~ 122 (335)
+.++..+..+.+++. |++.|=.=-.. ..+.- .=+++++. - +++-|..-.. ...+.+. + .+.++
T Consensus 191 ~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea-------~-~~~~L~vDaN-~~w~~~~---A-i~~~~ 257 (445)
T 3va8_A 191 DPEGVVKQAKKIIDEYGFKAIKLKGGVFPPADEVAAIKALHKA-------F-PGVPLRLDPN-AAWTVET---S-KWVAK 257 (445)
T ss_dssp SHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHH-------S-TTCCEEEECT-TCBCHHH---H-HHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHh-------C-CCCcEeeeCC-CCCCHHH---H-HHHHH
Confidence 567777777888875 99987543222 11222 22456654 2 3444443332 1223222 2 23455
Q ss_pred HhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCcc
Q 035739 123 ALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSI 201 (335)
Q Consensus 123 ~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~ 201 (335)
+|. ++ +.++-.|. . -++.+.++++.-.|. +.|-+.++..++.++++.... .+
T Consensus 258 ~L~-~~--l~~iEeP~-------------------~---d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~--di 310 (445)
T 3va8_A 258 ELE-GI--VEYLEDPA-------------------G---EIEGMAAVAKEASMPLATNMAVVAFDHLPPSILQDAV--QV 310 (445)
T ss_dssp HTT-TT--CSEEESCB-------------------S---HHHHHHHHHTTCSSCEEESSSCCSGGGHHHHHHTTCC--SE
T ss_pred HHh-hh--cCeEeecC-------------------c---CHHHHHHHHHcCCCCEEeCCccCCHHHHHHHHHcCCC--CE
Confidence 664 34 67777662 1 356777777764444 566677788888888876543 46
Q ss_pred ccCCCCcc---cccHHHHHHHHHcCCeEEEeccCCC
Q 035739 202 NQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 202 ~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
+|....-+ ..-.++...|+++|+.+..++....
T Consensus 311 v~~d~~~~GGitea~kia~lA~~~gv~v~~h~~~e~ 346 (445)
T 3va8_A 311 ILSDHHFWGGLRKSQTLASICATWGLRLSMHSNSHL 346 (445)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHHTCEEEECCCSCC
T ss_pred EEecchhcCCHHHHHHHHHHHHHcCCEEEEeCCccc
Confidence 66543322 2236789999999999988776543
No 180
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=26.21 E-value=3.6e+02 Score=24.21 Aligned_cols=109 Identities=12% Similarity=0.060 Sum_probs=66.1
Q ss_pred CChHHHHHHHHHHHHcCCCEeeCCCC--------------cC-------CHHHHHHHHHHHHHcCCCCCCCceEEeeccC
Q 035739 46 SDTDALKLVVLEAIKLGYRHFDTAAM--------------YG-------TEKALGEAIAEALRLGLVSSREQLFITSKLW 104 (335)
Q Consensus 46 ~~~~~~~~~l~~A~~~Gin~~DtA~~--------------Yg-------se~~lG~~l~~~~~~g~~~~R~~~~i~tK~~ 104 (335)
.+.+....+.+.+-+.|+.+|=|.-. |- +-.+|-+.-+ ....|+|+|=.
T Consensus 88 l~~e~~~~L~~~~~~~Gi~~~st~~d~~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~---------~gkPviLstGm- 157 (349)
T 2wqp_A 88 LNEEDEIKLKEYVESKGMIFISTLFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVAS---------FGKPIILSTGM- 157 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHTCSCEEECGGGTTCHHHHHHHHT---------TCSCEEEECTT-
T ss_pred CCHHHHHHHHHHHHHhCCeEEEeeCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHh---------cCCeEEEECCC-
Confidence 46788888889999999998844322 21 2332222211 34556666544
Q ss_pred CCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC-CccEEEecCc
Q 035739 105 CQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLG-LTKSIGLSNF 183 (335)
Q Consensus 105 ~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~G-kir~iGvs~~ 183 (335)
.+.+.+..+++-..+. |. ++.++|+...+. .+.+ +. -+.++..|++.= .+ -||.|+|
T Consensus 158 ---at~~Ei~~Ave~i~~~-G~---~iiLlhc~s~Yp-------~~~~---~~----nL~ai~~lk~~f~~l-pVg~sdH 215 (349)
T 2wqp_A 158 ---NSIESIKKSVEIIREA-GV---PYALLHCTNIYP-------TPYE---DV----RLGGMNDLSEAFPDA-IIGLSDH 215 (349)
T ss_dssp ---CCHHHHHHHHHHHHHH-TC---CEEEEECCCCSS-------CCGG---GC----CTHHHHHHHHHCTTS-EEEEECC
T ss_pred ---CCHHHHHHHHHHHHHc-CC---CEEEEeccCCCC-------CChh---hc----CHHHHHHHHHHCCCC-CEEeCCC
Confidence 2568898888876654 43 999999865432 1111 11 235666666663 33 4799999
Q ss_pred cHH
Q 035739 184 SRK 186 (335)
Q Consensus 184 ~~~ 186 (335)
+..
T Consensus 216 t~G 218 (349)
T 2wqp_A 216 TLD 218 (349)
T ss_dssp SSS
T ss_pred CCc
Confidence 844
No 181
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=25.70 E-value=2e+02 Score=25.31 Aligned_cols=80 Identities=16% Similarity=0.125 Sum_probs=47.5
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcC----C---HHHHHHHHHHHH--------HcCCCCCCC---ceEEeeccC-CCC
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYG----T---EKALGEAIAEAL--------RLGLVSSRE---QLFITSKLW-CQN 107 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg----s---e~~lG~~l~~~~--------~~g~~~~R~---~~~i~tK~~-~~~ 107 (335)
+.+......+.|+++|..|+=|+..++ + -.++-+++++.. -+|+ .|. .--+.-|.. ..-
T Consensus 164 ~~e~i~~A~~ia~~AGADFVKTSTGf~~~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~--~~~~~tg~~vgvKAs~GGI 241 (297)
T 4eiv_A 164 GGDIISRAAVAALEGGADFLQTSSGLGATHATMFTVHLISIALREYMVRENERIRVEGI--NREGAAVRCIGIKIEVGDV 241 (297)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHHHHHCC--------------------CCEEEEECTTC
T ss_pred cHHHHHHHHHHHHHhCCCEEEcCCCCCCCCCCHHHHHHHHHHHHHHhcccccccccccc--ccccccCCceeEEecCCCC
Confidence 344467888999999999999999986 2 234555554321 1233 221 122445553 334
Q ss_pred CChhhHHHHHHHHHHHhCCCcc
Q 035739 108 AHRDHVIPALKKSLSALQMEYL 129 (335)
Q Consensus 108 ~~~~~i~~~~e~sL~~Lg~d~i 129 (335)
.+.+...+-++..-+ ||-+++
T Consensus 242 rt~e~A~~~i~~~~e-lG~~wl 262 (297)
T 4eiv_A 242 HMAETADFLMQMIFE-NGPRSI 262 (297)
T ss_dssp CHHHHHHHHHHHHHH-HCGGGC
T ss_pred CCHHHHHHHHHHHHH-hCcccc
Confidence 556777777777777 996653
No 182
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=25.38 E-value=2.8e+02 Score=24.61 Aligned_cols=121 Identities=11% Similarity=0.005 Sum_probs=63.2
Q ss_pred CCCHHHHHHHHHHHHHcCCccEEEecC-------ccHHHHHHHHHhcC-CCCccccCCCCcccccHHHHHHHHHcCCeEE
Q 035739 156 PMDYRGVWEAMEESQMLGLTKSIGLSN-------FSRKKIETILTFAT-IPPSINQVEMHPVWQQRKLIEFCKAKGIIVT 227 (335)
Q Consensus 156 ~~~~~~~~~~L~~l~~~Gkir~iGvs~-------~~~~~l~~~~~~~~-~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~ 227 (335)
....+++.+.++++++.| ++.|.+.. ...+.+.++++... ..+.+. .++.....+.++..++.|+..+
T Consensus 98 ~~s~eei~~~~~~~~~~g-~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~g~~i~---~t~G~l~~e~l~~L~~aGvd~v 173 (369)
T 1r30_A 98 LMEVEQVLESARKAKAAG-STRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEAC---MTLGTLSESQAQRLANAGLDYY 173 (369)
T ss_dssp CCCHHHHHHHHHHHHHTT-CSEEEEEECCSSCCTTTHHHHHHHHHHHHHTTSEEE---EECSSCCHHHHHHHHHHCCCEE
T ss_pred cCCHHHHHHHHHHHHHcC-CcEEEEEeCCCCCCcCCHHHHHHHHHHHHHcCCeEE---EecCCCCHHHHHHHHHCCCCEE
Confidence 355889999999988877 44444422 23455555554432 122221 2222234678888888888766
Q ss_pred EeccCCCCCCcCCCCccCChHHHHHHHHHhCCCHHHHHHHHHhhcC----CEEEeCC-CCHHHHHHhhcc
Q 035739 228 AYSPLGAVGKIYGSNQVLENEALKEIAKARGKTVAQVSLRWIVEQG----ATVVIKS-LNLERMKQNLGI 292 (335)
Q Consensus 228 a~~pl~~~G~l~~~~~~~~~~~l~~la~~~g~s~~q~al~~~l~~~----~~vi~g~-~~~~~l~enl~a 292 (335)
..+.=+ ..+.++.+...+.....--+++.+...| +.+|+|. .+.+++.+.++.
T Consensus 174 ~i~les------------~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~I~Gl~et~ed~~~~l~~ 231 (369)
T 1r30_A 174 NHNLDT------------SPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQ 231 (369)
T ss_dssp ECCCBS------------CHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEECCEEECSSCCHHHHHHHHHH
T ss_pred eecCcC------------CHHHHHHhCCCCCHHHHHHHHHHHHHcCCeeeeeeEeeCCCCHHHHHHHHHH
Confidence 543211 1234444432211111222444444443 5577886 456777666653
No 183
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=25.27 E-value=2e+02 Score=25.25 Aligned_cols=85 Identities=19% Similarity=0.230 Sum_probs=54.9
Q ss_pred HHHHHHc-CCccEEEecCccHHHHHHHHHhcCCC--------------CccccCCCCcccccHHHHHHHHHcCCeEEEec
Q 035739 166 MEESQML-GLTKSIGLSNFSRKKIETILTFATIP--------------PSINQVEMHPVWQQRKLIEFCKAKGIIVTAYS 230 (335)
Q Consensus 166 L~~l~~~-Gkir~iGvs~~~~~~l~~~~~~~~~~--------------~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~ 230 (335)
+..+.+. ..++-++|++-+.+..+++.+..+.+ ++++-+ ..+.....++...|-++|+.|+.=+
T Consensus 35 ~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i-~tp~~~H~~~~~~al~aGkhVl~EK 113 (340)
T 1zh8_A 35 LPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDL-TLPVELNLPFIEKALRKGVHVICEK 113 (340)
T ss_dssp HHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEE-CCCGGGHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEE-eCCchHHHHHHHHHHHCCCcEEEeC
Confidence 4455555 56778899998887776665543321 111111 2222334678888889999999999
Q ss_pred cCCCCCCcCCCCccCChHHHHHHHHHhCC
Q 035739 231 PLGAVGKIYGSNQVLENEALKEIAKARGK 259 (335)
Q Consensus 231 pl~~~G~l~~~~~~~~~~~l~~la~~~g~ 259 (335)
|++. ...+..++.+.|++.|+
T Consensus 114 Pla~--------~~~ea~~l~~~a~~~g~ 134 (340)
T 1zh8_A 114 PIST--------DVETGKKVVELSEKSEK 134 (340)
T ss_dssp SSSS--------SHHHHHHHHHHHHHCSS
T ss_pred CCCC--------CHHHHHHHHHHHHHcCC
Confidence 9975 33345678888888775
No 184
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=25.17 E-value=2.9e+02 Score=25.00 Aligned_cols=21 Identities=10% Similarity=0.260 Sum_probs=16.9
Q ss_pred HHHHHHHHHcCCeEEEeccCC
Q 035739 213 RKLIEFCKAKGIIVTAYSPLG 233 (335)
Q Consensus 213 ~~~l~~~~~~gi~v~a~~pl~ 233 (335)
.++.++|+++|+.++.-.+.+
T Consensus 224 ~~i~~l~~~~~~~li~De~~~ 244 (447)
T 3b46_A 224 TTLGNICVKHNVVIISDEVYE 244 (447)
T ss_dssp HHHHHHHHHTTCEEEEECTTT
T ss_pred HHHHHHHHHcCcEEEEeccch
Confidence 678899999999988866554
No 185
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=25.14 E-value=3.8e+02 Score=24.20 Aligned_cols=153 Identities=10% Similarity=0.024 Sum_probs=88.0
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCC-----------HHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHH
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGT-----------EKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIP 115 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygs-----------e~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~ 115 (335)
+.++..+.++.+++.|++.|=.=-.... +...=+++++. + + ++-|..-.. ..++.+.
T Consensus 165 ~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~~~~~~~di~~v~avR~a----~--~--d~~L~vDaN-~~w~~~~--- 232 (393)
T 3u9i_A 165 SVTAAARAAQAIVARGVTTIKIKIGAGDPDATTIRTMEHDLARIVAIRDV----A--P--TARLILDGN-CGYTAPD--- 232 (393)
T ss_dssp -CHHHHHHHHHHHTTTCCEEEEECC-------CHHHHHHHHHHHHHHHHH----S--T--TSEEEEECC-SCCCHHH---
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCCcccccccccHHHHHHHHHHHHHH----C--C--CCeEEEEcc-CCCCHHH---
Confidence 4567777788888999998743211111 11112344543 1 2 233443332 1233322
Q ss_pred HHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHh
Q 035739 116 ALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTF 194 (335)
Q Consensus 116 ~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~ 194 (335)
..+.+++|.-+..++.++-.|.... -++.+.++++.-.|. +.|=+.++..++.++++.
T Consensus 233 -A~~~~~~L~~~~~~i~~iEeP~~~~--------------------d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 291 (393)
T 3u9i_A 233 -ALRLLDMLGVHGIVPALFEQPVAKD--------------------DEEGLRRLTATRRVPVAADESVASATDAARLARN 291 (393)
T ss_dssp -HHHHHHTTTTTTCCCSEEECCSCTT--------------------CTTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHT
T ss_pred -HHHHHHHHhhCCCCeEEEECCCCCC--------------------cHHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHc
Confidence 2234556632446888888885421 135566677664443 677788888999998886
Q ss_pred cCCCCccccCCCCc--ccccHHHHHHHHHcCCeEEEeccCCC
Q 035739 195 ATIPPSINQVEMHP--VWQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 195 ~~~~~~~~q~~~~~--~~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
... .++|+.... +..-.++...|+++|+.++..+.+.+
T Consensus 292 ~a~--d~i~~k~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 331 (393)
T 3u9i_A 292 AAV--DVLNIKLMKCGIVEALDIAAIARTAGLHLMIGGMVES 331 (393)
T ss_dssp TCC--SEEEECHHHHCHHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred CCC--CEEEecccccCHHHHHHHHHHHHHcCCeEEecCCccc
Confidence 543 456555443 11226788999999999998776654
No 186
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=25.11 E-value=3.4e+02 Score=23.53 Aligned_cols=75 Identities=13% Similarity=0.111 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHcCCCEeeCCCCcC--CHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCC------ChhhHHHHHHHHH
Q 035739 50 ALKLVVLEAIKLGYRHFDTAAMYG--TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNA------HRDHVIPALKKSL 121 (335)
Q Consensus 50 ~~~~~l~~A~~~Gin~~DtA~~Yg--se~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~------~~~~i~~~~e~sL 121 (335)
.+.+.++.|-+.|+++++.++..- +++..-++++.. .+. +.|.+-++..+. ++..+.+.+++-|
T Consensus 111 ~~~~yl~~~k~lGF~~IEISdGti~l~~~~~~~lI~~a-------~~~-f~Vl~EvG~K~~~~~~~~~~~~~I~~~~~dL 182 (276)
T 1u83_A 111 KVNEFHRYCTYFGCEYIEISNGTLPMTNKEKAAYIADF-------SDE-FLVLSEVGSKDAELASRQSSEEWLEYIVEDM 182 (276)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSSSCCCHHHHHHHHHHH-------TTT-SEEEEECSCCC------CCSTHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHH-------Hhh-cEEeeeccccCccccCCCCHHHHHHHHHHHH
Confidence 467788889999999999998887 677777788865 444 888888876433 5677777777777
Q ss_pred HHhCCCccceEEeec
Q 035739 122 SALQMEYLDLYLVHW 136 (335)
Q Consensus 122 ~~Lg~d~iDl~~lH~ 136 (335)
+. | .|.+++-.
T Consensus 183 eA-G---A~~ViiEa 193 (276)
T 1u83_A 183 EA-G---AEKVITEA 193 (276)
T ss_dssp HH-T---EEEEEEC-
T ss_pred HC-C---CcEEEEee
Confidence 65 5 56677765
No 187
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=24.97 E-value=3.8e+02 Score=24.38 Aligned_cols=71 Identities=7% Similarity=0.003 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHc-----CCcc-EEEecCccHHHHHHHHHhcCCCCccccCCCCcc---cccHHHHHHHHHcCCeEEEec
Q 035739 160 RGVWEAMEESQML-----GLTK-SIGLSNFSRKKIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYS 230 (335)
Q Consensus 160 ~~~~~~L~~l~~~-----Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~ 230 (335)
.+-++.+.+|.+. -.|. ..|=+.++...+.++++.... .++|+..+-+ ..-.++..+|+++|+.++..+
T Consensus 282 ~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~--d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~~ 359 (413)
T 1kko_A 282 PDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSC--HMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGG 359 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCC--SEEEECGGGGSSTHHHHHHHHHHHHHTCEEEECC
T ss_pred cccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCC--CEEEeCccccCCHHHHHHHHHHHHHcCCeEEecC
Confidence 4567777777775 3343 455666778888888875443 4566554432 222678999999999998876
Q ss_pred cC
Q 035739 231 PL 232 (335)
Q Consensus 231 pl 232 (335)
..
T Consensus 360 ~~ 361 (413)
T 1kko_A 360 TC 361 (413)
T ss_dssp CT
T ss_pred CC
Confidence 64
No 188
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=24.71 E-value=4e+02 Score=24.64 Aligned_cols=93 Identities=11% Similarity=0.084 Sum_probs=60.0
Q ss_pred hhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecC--ccHHH
Q 035739 110 RDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSN--FSRKK 187 (335)
Q Consensus 110 ~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~--~~~~~ 187 (335)
++.+.+.+.+.++.+ +++++-.|... +-|+.+.+|.+..+|--.|=-. +++..
T Consensus 272 ~~e~~~~~~~ll~~y-----~i~~IEdPl~~--------------------dD~~g~~~L~~~~~ipI~gDE~~vt~~~~ 326 (439)
T 2akz_A 272 GDQLGALYQDFVRDY-----PVVSIEDPFDQ--------------------DDWAAWSKFTANVGIQIVGDDLTVTNPKR 326 (439)
T ss_dssp HHHHHHHHHHHHHHS-----CEEEEECCSCT--------------------TCHHHHHHHHHTCSSEEEESTTTTTCHHH
T ss_pred HHHHHHHHHHHHHhC-----CCcEEECCCCc--------------------ccHHHHHHHHhCCCCEEEeCCCccCCHHH
Confidence 344444444445443 58889888542 2377888888888887666443 37889
Q ss_pred HHHHHHhcCCCCccccCCCCcc---cccHHHHHHHHHcCCeEEEe
Q 035739 188 IETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 188 l~~~~~~~~~~~~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~ 229 (335)
+.++++.... .++|+..+-. ....++..+|+++|+.++..
T Consensus 327 ~~~~i~~~a~--d~i~iKv~qiGGitea~~ia~lA~~~g~~~~~s 369 (439)
T 2akz_A 327 IERAVEEKAC--NCLLLKVNQIGSVTEAIQACKLAQENGWGVMVS 369 (439)
T ss_dssp HHHHHHTTCC--SEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHhCCC--CEEEechhhcCCHHHHHHHHHHHHHCCCeEEee
Confidence 9999886543 3555443322 12267899999999997664
No 189
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=24.70 E-value=2.5e+02 Score=26.17 Aligned_cols=151 Identities=9% Similarity=0.044 Sum_probs=85.9
Q ss_pred HHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcCCCCCCCceEEeecc-----CC----------------------
Q 035739 53 LVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLFITSKL-----WC---------------------- 105 (335)
Q Consensus 53 ~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g~~~~R~~~~i~tK~-----~~---------------------- 105 (335)
..+..|+-.|---++-.+.++.+. -+.|.+.++. +=.++.|.+.- |.
T Consensus 26 ~~fA~ai~~G~a~~~~Cp~~~~~~--~~~la~~lap----pI~~V~iG~G~~~v~iGGEtvL~rhE~tf~n~p~ia~~V~ 99 (446)
T 4djd_C 26 LAFAMNLASGKASLDSCPYVSDAA--REALDAAAAP----PIAKVVLGAGPTAVEMGDETELFRHDKRFYHETAIAIQVS 99 (446)
T ss_dssp HHHHHHHHHTCSCGGGCSCSCHHH--HHHHHHTTSC----SSCEEEESSTTSCEEEECCCCSSGGGSCCCSCCEEEEEEE
T ss_pred HHHHHHHHcCCCCcccCCCCcHHH--HHHHHhhccC----CceeEEecCCcEEEEECCeeeEEeCCcCCCCCCeEEEEEe
Confidence 455667777876677676776432 2345544332 44556664332 11
Q ss_pred CCCChhhHHHHHHHHH----HHhCC-CccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEe
Q 035739 106 QNAHRDHVIPALKKSL----SALQM-EYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGL 180 (335)
Q Consensus 106 ~~~~~~~i~~~~e~sL----~~Lg~-d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGv 180 (335)
...+.+.+...++..- ++.|- =.+|++.|+.-.. +.+.+...++.+++. -=--+-+
T Consensus 100 D~~~e~~~~~~~~~~~~~~~~rvg~~~~~D~ial~~~s~------------------dpe~~~~vVk~V~e~-~dvPL~I 160 (446)
T 4djd_C 100 DNLSSEELKAKVEAINGLNFDRVGQHYTIQAIAIRHDAD------------------DPAAFKAAVASVAAA-TQLNLVL 160 (446)
T ss_dssp TTSCHHHHHHHHHHHTTCCEEETTEEECCCEEEEECCSS------------------STHHHHHHHHHHHTT-CCSEEEE
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHhccCcEEEEEeCCC------------------CHHHHHHHHHHHHHh-CCCCEEE
Confidence 0112233444443331 12331 1688999997632 134555555555543 2236888
Q ss_pred cCccHHHHHHHHHhc-CCCCccccCCCCcccccHHHHHHHHHcCCeEEEecc
Q 035739 181 SNFSRKKIETILTFA-TIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSP 231 (335)
Q Consensus 181 s~~~~~~l~~~~~~~-~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~p 231 (335)
.+.+++.++++++.. ...+.++-... +.-+++.+.+.++|..++++++
T Consensus 161 DS~dpevleaALea~a~~~plI~sat~---dn~e~m~~lAa~y~~pVi~~~~ 209 (446)
T 4djd_C 161 MADDPDVLKEALAGVADRKPLLYAATG---ANYEAMTALAKENNCPLAVYGN 209 (446)
T ss_dssp ECSCHHHHHHHHGGGGGGCCEEEEECT---TTHHHHHHHHHHTTCCEEEECS
T ss_pred ecCCHHHHHHHHHhhcCcCCeeEecch---hhHHHHHHHHHHcCCcEEEEec
Confidence 899999999999876 34444443221 1115789999999999999875
No 190
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=24.27 E-value=2.4e+02 Score=25.59 Aligned_cols=94 Identities=13% Similarity=0.145 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCC-ccEEEecCccHHHHHH
Q 035739 112 HVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGL-TKSIGLSNFSRKKIET 190 (335)
Q Consensus 112 ~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gk-ir~iGvs~~~~~~l~~ 190 (335)
.-+..+-+.|.++|+++|.+-. |.. ..+.++.++.+++.++ ++..+.+....+.++.
T Consensus 25 ~~k~~ia~~L~~~Gv~~IE~g~---p~~-------------------~~~~~~~~~~i~~~~~~~~v~~~~r~~~~di~~ 82 (382)
T 2ztj_A 25 QDKVEIAKALDEFGIEYIEVTT---PVA-------------------SPQSRKDAEVLASLGLKAKVVTHIQCRLDAAKV 82 (382)
T ss_dssp HHHHHHHHHHHHHTCSEEEECC---TTS-------------------CHHHHHHHHHHHTSCCSSEEEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCcCEEEEcC---CcC-------------------CHHHHHHHHHHHhcCCCcEEEEEcccChhhHHH
Confidence 3455666778899999988842 321 2345677777777664 4444444445677888
Q ss_pred HHHhcCCCCccccCCCCc------c-------cccHHHHHHHHHcC--CeEEE
Q 035739 191 ILTFATIPPSINQVEMHP------V-------WQQRKLIEFCKAKG--IIVTA 228 (335)
Q Consensus 191 ~~~~~~~~~~~~q~~~~~------~-------~~~~~~l~~~~~~g--i~v~a 228 (335)
+++. +.+.+-+-+..|. . ..-.+.+++++++| +.+..
T Consensus 83 a~~~-g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~ 134 (382)
T 2ztj_A 83 AVET-GVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRF 134 (382)
T ss_dssp HHHT-TCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHc-CCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 8774 3331111111111 1 11146789999999 76644
No 191
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=24.27 E-value=3.5e+02 Score=23.40 Aligned_cols=149 Identities=14% Similarity=0.139 Sum_probs=74.5
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCC
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQM 126 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~ 126 (335)
....+.+.+..+++.+....-.. .....+.+.+.+.+.. |+....+++++++ ....+++..++.+ +
T Consensus 38 ~~~~v~~a~~~~~~~~~~~y~~~-~~~~~~~l~~~l~~~~--g~~~~~~~v~~~~----------g~~~a~~~~~~~l-~ 103 (383)
T 3kax_A 38 VPQPIQTALKKRIEHPIFGYTLP-PENIGDIICNWTKKQY--NWDIQKEWIVFSA----------GIVPALSTSIQAF-T 103 (383)
T ss_dssp CCHHHHHHHHHHHHSCCCCCCCC-CTTHHHHHHHHHHHHH--CCCCCGGGEEEES----------CHHHHHHHHHHHH-C
T ss_pred CCHHHHHHHHHHHhcCCCCCCCC-CHHHHHHHHHHHHHHh--CCCCChhhEEEcC----------CHHHHHHHHHHHh-C
Confidence 34667788888888764322111 1112444555555432 3110566777652 2333444444444 2
Q ss_pred CccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC-CccEEEec---C---ccHHHHHHHHHhcCCCC
Q 035739 127 EYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLG-LTKSIGLS---N---FSRKKIETILTFATIPP 199 (335)
Q Consensus 127 d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~G-kir~iGvs---~---~~~~~l~~~~~~~~~~~ 199 (335)
+.=|-+++..|.. ......+ +..| ++..+-+. + .+.+.+++++. .+...
T Consensus 104 ~~gd~vl~~~~~~--------------------~~~~~~~---~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~ 159 (383)
T 3kax_A 104 KENESVLVQPPIY--------------------PPFFEMV---TTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQ-QGVKL 159 (383)
T ss_dssp CTTCEEEECSSCC--------------------HHHHHHH---HHTTCEEEECCCEEETTEEECCHHHHHHHHT-TTCCE
T ss_pred CCCCEEEEcCCCc--------------------HHHHHHH---HHcCCEEEeccceecCCcEEEcHHHHHHHhC-cCCeE
Confidence 3336666665532 2222222 2233 33333221 1 46778887773 33333
Q ss_pred ccccCCCCccc---c---cHHHHHHHHHcCCeEEEeccCC
Q 035739 200 SINQVEMHPVW---Q---QRKLIEFCKAKGIIVTAYSPLG 233 (335)
Q Consensus 200 ~~~q~~~~~~~---~---~~~~l~~~~~~gi~v~a~~pl~ 233 (335)
.++..+-|+.- . -.++.+.|+++|+.++.=.+.+
T Consensus 160 v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~ 199 (383)
T 3kax_A 160 MLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHS 199 (383)
T ss_dssp EEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred EEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEcccc
Confidence 33333334331 1 1567888999999998876654
No 192
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=23.58 E-value=4.5e+02 Score=25.92 Aligned_cols=34 Identities=12% Similarity=0.164 Sum_probs=23.1
Q ss_pred HHHHHHHHHcCCccEEEecCc-cHHHHHHHHHhcC
Q 035739 163 WEAMEESQMLGLTKSIGLSNF-SRKKIETILTFAT 196 (335)
Q Consensus 163 ~~~L~~l~~~Gkir~iGvs~~-~~~~l~~~~~~~~ 196 (335)
+....++++.=++--|++..+ +++..+++++...
T Consensus 280 ~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~ 314 (729)
T 1o94_A 280 IPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGY 314 (729)
T ss_dssp HHHHHHHHTTCSSCEECCSCCCCHHHHHHHHHTTS
T ss_pred HHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHCCC
Confidence 445566666666777888777 4777788777543
No 193
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=23.51 E-value=1.6e+02 Score=26.10 Aligned_cols=119 Identities=11% Similarity=0.140 Sum_probs=66.8
Q ss_pred CCHHHHHHHHHHHHHcCCccEEEecC-ccH------HHHHHHHHhcC--CCCccccCCCCcccccHHHHHHHHHcCCeEE
Q 035739 157 MDYRGVWEAMEESQMLGLTKSIGLSN-FSR------KKIETILTFAT--IPPSINQVEMHPVWQQRKLIEFCKAKGIIVT 227 (335)
Q Consensus 157 ~~~~~~~~~L~~l~~~Gkir~iGvs~-~~~------~~l~~~~~~~~--~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~ 227 (335)
...+++.+.++++++.| ++.|.+.. ..+ +.+.++++..+ .+. .+..++.....+.+...++.|+..+
T Consensus 91 ls~eei~~~~~~~~~~G-~~~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~~i---~i~~s~g~~~~e~l~~L~~aG~~~i 166 (350)
T 3t7v_A 91 LTMEEIKETCKTLKGAG-FHMVDLTMGEDPYYYEDPNRFVELVQIVKEELGL---PIMISPGLMDNATLLKAREKGANFL 166 (350)
T ss_dssp CCHHHHHHHHHHHTTSC-CSEEEEEECCCHHHHHSTHHHHHHHHHHHHHHCS---CEEEECSSCCHHHHHHHHHTTEEEE
T ss_pred CCHHHHHHHHHHHHHCC-CCEEEEeeCCCCccccCHHHHHHHHHHHHhhcCc---eEEEeCCCCCHHHHHHHHHcCCCEE
Confidence 45889999999998887 45555432 212 23344433221 111 1223443345788999999998766
Q ss_pred EeccCCCCCCcCCCCccCChHHHHHHHHHhCCCHH--HHHHHHHhhcC----CEEEeCC-CCHHHHHHhhcc
Q 035739 228 AYSPLGAVGKIYGSNQVLENEALKEIAKARGKTVA--QVSLRWIVEQG----ATVVIKS-LNLERMKQNLGI 292 (335)
Q Consensus 228 a~~pl~~~G~l~~~~~~~~~~~l~~la~~~g~s~~--q~al~~~l~~~----~~vi~g~-~~~~~l~enl~a 292 (335)
..+ +.. ...+.++.+..+ .+.. --+++++...| ...++|. .+.+++.+.+..
T Consensus 167 ~i~-lEt----------~~~~~~~~i~~~--~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~e~~~~~l~~ 225 (350)
T 3t7v_A 167 ALY-QET----------YDTELYRKLRVG--QSFDGRVNARRFAKQQGYCVEDGILTGVGNDIESTILSLRG 225 (350)
T ss_dssp ECC-CBC----------SCHHHHHHHSTT--CCHHHHHHHHHHHHHHTCEEEEEEEESSSCCHHHHHHHHHH
T ss_pred EEe-eec----------CCHHHHHHhCCC--CCHHHHHHHHHHHHHcCCeEccceEeecCCCHHHHHHHHHH
Confidence 532 211 133455555443 3333 23566666666 5677887 467777665544
No 194
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=23.46 E-value=4e+02 Score=24.63 Aligned_cols=147 Identities=14% Similarity=0.096 Sum_probs=85.5
Q ss_pred ChHHHHHHHHHHHHc-CCCEeeCCCCc-CCHHH--HHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKL-GYRHFDTAAMY-GTEKA--LGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 122 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~-Gin~~DtA~~Y-gse~~--lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~ 122 (335)
+.++..+..+.+++. |++.|=.=-.. ..+.- .=+++++. - +++-|..-.. ...+.+. ..+.++
T Consensus 193 ~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea-------~-~d~~L~vDaN-~~w~~~~----Ai~~~~ 259 (445)
T 3vdg_A 193 DPDGIVAQARRMIDEYGFSAIKLKGGVFAPEEEMAAVEALRAA-------F-PDHPLRLDPN-AAWTPQT----SVKVAA 259 (445)
T ss_dssp SHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHH-------C-TTSCEEEECT-TCSCHHH----HHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHHHHHh-------C-CCCcEEEECC-CCCCHHH----HHHHHH
Confidence 667777777888875 99987542221 11221 22456654 3 3444443332 1233322 223445
Q ss_pred HhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCcc
Q 035739 123 ALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSI 201 (335)
Q Consensus 123 ~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~ 201 (335)
.|. ++ +.++-.|.. -++.+.++++.-.|. +.|-+.++..++.++++.... .+
T Consensus 260 ~L~-~~--l~~iEeP~~----------------------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~--di 312 (445)
T 3vdg_A 260 GLE-GV--LEYLEDPTP----------------------GLDGMAEVAAQAPMPLATNMCVVAFDQLPAAVAKNSV--QV 312 (445)
T ss_dssp HTT-TT--CSEEECCSS----------------------SHHHHHHHHHHCSSCEEESSSCCSGGGHHHHHHHTCC--SE
T ss_pred HHh-hH--HHeeeCCCC----------------------CHHHHHHHHhcCCCCEEcCCcCCCHHHHHHHHHcCCC--CE
Confidence 664 34 777777721 135666676654443 566677788888888886654 46
Q ss_pred ccCCCCcc---cccHHHHHHHHHcCCeEEEeccCC
Q 035739 202 NQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPLG 233 (335)
Q Consensus 202 ~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl~ 233 (335)
+|....-+ ..-.++...|+++|+.+..++...
T Consensus 313 v~~d~~~~GGitea~kia~lA~~~gv~v~~h~~~e 347 (445)
T 3vdg_A 313 VLSDHHYWGGLQRSRLLAGICDTFGLGLSMHSNSH 347 (445)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHHTCEEEECCCSC
T ss_pred EeeCcceeCCHHHHHHHHHHHHHcCCEEEEeCCcc
Confidence 66543322 223678999999999988876553
No 195
>2bas_A YKUI protein; EAL domain, structural genom protein structure initiative, midwest center for structural genomics, MCSG, signaling protein; 2.61A {Bacillus subtilis} SCOP: c.1.33.1 d.110.6.2 PDB: 2w27_A*
Probab=23.35 E-value=1.4e+02 Score=27.59 Aligned_cols=119 Identities=13% Similarity=0.144 Sum_probs=62.0
Q ss_pred CceEEeeccCCCCCChhhHHHH--HHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHc
Q 035739 95 EQLFITSKLWCQNAHRDHVIPA--LKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQML 172 (335)
Q Consensus 95 ~~~~i~tK~~~~~~~~~~i~~~--~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~ 172 (335)
....|+-.+.........+... +.+.|++.++.. +-+.+--..... ..+...+.+.+..|++.
T Consensus 105 ~~~~l~iNls~~~l~~~~~~~~~~l~~~l~~~~~~~-~~l~lEItE~~~--------------~~~~~~~~~~l~~Lr~~ 169 (431)
T 2bas_A 105 SDLLIFMNQDANLLMLDHGESFLELLKEYEAKGIEL-HRFVLEITEHNF--------------EGDIEQLYHMLAYYRTY 169 (431)
T ss_dssp TTCEEEEECCHHHHGGGTTHHHHHHHHHHHHTTCCG-GGEEEEECCTTC--------------CSCHHHHHHHHHHHHTT
T ss_pred CCCeEEEEECHHHHCCcccccHHHHHHHHHHcCCCC-CeEEEEEECChh--------------hCCHHHHHHHHHHHHHC
Confidence 3455655554322222334444 777788888643 334444332110 23367899999999999
Q ss_pred CCccEEEecCcc-----HHHHHHH-HHhcCCCCcccc-CCCCccccc--HHHHHHHHHcCCeEEEec
Q 035739 173 GLTKSIGLSNFS-----RKKIETI-LTFATIPPSINQ-VEMHPVWQQ--RKLIEFCKAKGIIVTAYS 230 (335)
Q Consensus 173 Gkir~iGvs~~~-----~~~l~~~-~~~~~~~~~~~q-~~~~~~~~~--~~~l~~~~~~gi~v~a~~ 230 (335)
|-- |.+.+|+ ...+..+ .+..+++..+++ +.-+...+. ..++.+|++.|+.|+|-+
T Consensus 170 G~~--ialDDFG~g~ssl~~L~~l~~d~iKID~s~v~~~~~~~~~~~il~~ii~la~~lg~~vvAEG 234 (431)
T 2bas_A 170 GIK--IAVDNIGKESSNLDRIALLSPDLLKIDLQALKVSQPSPSYEHVLYSISLLARKIGAALLYED 234 (431)
T ss_dssp TCE--EEEEEETTTBCCHHHHHHHCCSEEEEECTTTC----CCHHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCE--EEEECCCCCcHHHHHHHhCCCCEEEECHHHHhhhhcCHhHHHHHHHHHHHHHHcCCEEEEEe
Confidence 974 4444432 3333333 121222222221 111111111 567889999999999965
No 196
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=23.20 E-value=4.2e+02 Score=23.91 Aligned_cols=146 Identities=10% Similarity=0.083 Sum_probs=83.6
Q ss_pred ChHHHHHHHHHHHHc---CCCEeeCCCCcC---CHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKL---GYRHFDTAAMYG---TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKS 120 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~---Gin~~DtA~~Yg---se~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~s 120 (335)
+.++..+.++.+++. |++.|-.=-... .+...=+++++. --+++-|...... ..+.+...+ +-+.
T Consensus 171 ~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~~~~~d~~~v~avR~a-------~G~~~~l~vDaN~-~~~~~~A~~-~~~~ 241 (390)
T 3ugv_A 171 PAEVAAEAVELKAEGQGTGFKGLKLRMGRDDPAVDIETAEAVWDA-------VGRDTALMVDFNQ-GLDMAEAMH-RTRQ 241 (390)
T ss_dssp HHHHHHHHHHHHHTTCTTCCSEEEEECCCSSHHHHHHHHHHHHHH-------HCTTSEEEEECTT-CCCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHhhhCCCcEEEEecCCCCHHHHHHHHHHHHHH-------hCCCCEEEEECCC-CCCHHHHHH-HHHH
Confidence 567777778888889 999886432221 112222455553 1244556666532 233333222 2223
Q ss_pred HHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCC
Q 035739 121 LSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPP 199 (335)
Q Consensus 121 L~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~ 199 (335)
|+.+ ++.++..|... +-++.+.++++.-.|. ..|=+-++..++.++++....
T Consensus 242 l~~~-----~i~~iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~-- 294 (390)
T 3ugv_A 242 IDDL-----GLEWIEEPVVY--------------------DNFDGYAQLRHDLKTPLMIGENFYGPREMHQALQAGAC-- 294 (390)
T ss_dssp HTTS-----CCSEEECCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCC--
T ss_pred HHhh-----CCCEEECCCCc--------------------ccHHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHcCCC--
Confidence 3444 45556666331 1245667777665554 556677788899999886543
Q ss_pred ccccCCCCcc---cccHHHHHHHHHcCCeEEE
Q 035739 200 SINQVEMHPV---WQQRKLIEFCKAKGIIVTA 228 (335)
Q Consensus 200 ~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a 228 (335)
.++|+....+ ..-.++...|+++|+.++.
T Consensus 295 d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~ 326 (390)
T 3ugv_A 295 DLVMPDFMRIGGVSGWMRAAGVAGAWGIPMST 326 (390)
T ss_dssp SEECCBHHHHTHHHHHHHHHHHHHHHTCCBCC
T ss_pred CEEEeCccccCCHHHHHHHHHHHHHcCCEEee
Confidence 4666554332 1226788999999999864
No 197
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=23.17 E-value=2.7e+02 Score=25.75 Aligned_cols=96 Identities=19% Similarity=0.182 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCC-ccEEEecCccHHHHHH
Q 035739 112 HVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGL-TKSIGLSNFSRKKIET 190 (335)
Q Consensus 112 ~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gk-ir~iGvs~~~~~~l~~ 190 (335)
.-+..+-+.|.++|+++|.+= +|.. ..+-++..+.+.+.|+ .+-++.+..+...++.
T Consensus 61 eeKl~Ia~~L~~~Gv~~IEvG---~P~a-------------------sp~d~~~~~~i~~~~~~~~v~~~~r~~~~di~~ 118 (423)
T 3ivs_A 61 EKKIQIAKALDNFGVDYIELT---SPVA-------------------SEQSRQDCEAICKLGLKCKILTHIRCHMDDARV 118 (423)
T ss_dssp HHHHHHHHHHHHHTCSEEEEC---CTTS-------------------CHHHHHHHHHHHTSCCSSEEEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEe---eccc-------------------CHHHHHHHHHHHhcCCCCEEEEeeccChhhHHH
Confidence 345556667999999998874 3522 2344566667776664 3334444555677887
Q ss_pred HHHhcCCCCccc-------cCCCCcccc-c------HHHHHHHHHcCCeEEEec
Q 035739 191 ILTFATIPPSIN-------QVEMHPVWQ-Q------RKLIEFCKAKGIIVTAYS 230 (335)
Q Consensus 191 ~~~~~~~~~~~~-------q~~~~~~~~-~------~~~l~~~~~~gi~v~a~~ 230 (335)
+++. +.+.+-+ +..+++... + .+.+.+|+++|+.|....
T Consensus 119 A~~a-G~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~ 171 (423)
T 3ivs_A 119 AVET-GVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSS 171 (423)
T ss_dssp HHHT-TCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHc-CCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 7774 3321111 111121111 1 357889999999876653
No 198
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=23.07 E-value=1.4e+02 Score=21.24 Aligned_cols=62 Identities=11% Similarity=0.074 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEe
Q 035739 161 GVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 161 ~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~ 229 (335)
.++..|.-..+.|++. .|. .+..++++......+++--..++. ....+..+|++++|+++-.
T Consensus 5 ki~~~L~la~kagk~v-~G~-----~~v~kai~~gka~lViiA~D~~~~-~~~~i~~~c~~~~ip~~~~ 66 (101)
T 3on1_A 5 KWLSLLGLAARARQLL-TGE-----EQVVKAVQNGQVTLVILSSDAGIH-TKKKLLDKCGSYQIPVKVV 66 (101)
T ss_dssp HHHHHHHHHHHTTCEE-ESH-----HHHHHHHHTTCCSEEEEETTSCHH-HHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHCCEe-ECH-----HHHHHHHHcCCCcEEEEeCCCCHH-HHHHHHHHHHHcCCCEEEe
Confidence 5677888889999974 343 677788887776666666666653 3356888999999998853
No 199
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=23.00 E-value=5.1e+02 Score=24.84 Aligned_cols=91 Identities=7% Similarity=-0.007 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHcCCccEEEecC-----------ccHHH-HHHHHHhcCCCCccccCCCCccc--ccHHHHHHHHHcCC
Q 035739 159 YRGVWEAMEESQMLGLTKSIGLSN-----------FSRKK-IETILTFATIPPSINQVEMHPVW--QQRKLIEFCKAKGI 224 (335)
Q Consensus 159 ~~~~~~~L~~l~~~Gkir~iGvs~-----------~~~~~-l~~~~~~~~~~~~~~q~~~~~~~--~~~~~l~~~~~~gi 224 (335)
..+..+.+.++.+.|.+.-+|=-. ...+. +..+.+ .+ ..+|++.+.+. ....++..|++ |+
T Consensus 435 ~~~~~~~~~~ai~~g~v~IlaHP~~~~~~~~~~~~~~~~~il~~~~e-~g---~~lEIN~~~~r~~~~~~~~~~a~e-Gl 509 (578)
T 2w9m_A 435 AARQTERLIRAVSHPLVTVLGHATGRLLLRRPGYALDLDAVLGACEA-NG---TVVEINANAARLDLDWREALRWRE-RL 509 (578)
T ss_dssp HHHHHHHHHHHHTCSSCCEECSTTCCBTTTBCCCCCCHHHHHHHHHH-HT---CEEEEECSTTTCBSCHHHHHHHTT-TC
T ss_pred HHHHHHHHHHHHhcCCCeEEECcchhhcCCCcCchhhHHHHHHHHHH-CC---CEEEEECCCCCcCcHHHHHHHHHc-CC
Confidence 556778888888889888776222 12232 333333 23 25555554432 23778899999 99
Q ss_pred eEEEeccCCCCCCcCCCCccCChHHHHHHHHHhCCC
Q 035739 225 IVTAYSPLGAVGKIYGSNQVLENEALKEIAKARGKT 260 (335)
Q Consensus 225 ~v~a~~pl~~~G~l~~~~~~~~~~~l~~la~~~g~s 260 (335)
.++.-|-... ...........+++++.|.+
T Consensus 510 ~i~igSDAH~------~~~~~~~~~~~~~~~~~g~~ 539 (578)
T 2w9m_A 510 KFAINTDAHV------PGGLRDARYGVMQARKAGLT 539 (578)
T ss_dssp CEEEECCCSS------GGGGGGHHHHHHHHHHTTCC
T ss_pred EEEEECCCCC------hhhcchHHHHHHHHHHcCCC
Confidence 9877665543 11111234445566665543
No 200
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=22.80 E-value=4.1e+02 Score=23.76 Aligned_cols=148 Identities=16% Similarity=0.162 Sum_probs=86.4
Q ss_pred ChHHHHHHHHHHHHcCCCEee--CCCCcCCHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHh
Q 035739 47 DTDALKLVVLEAIKLGYRHFD--TAAMYGTEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSAL 124 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~D--tA~~Ygse~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~L 124 (335)
+.++..+.++.+++.|++.|- ..+.. ..+.+ +++++. - .++-|..-.. ..++.+.. +.++.|
T Consensus 161 ~~~~~~~~a~~~~~~G~~~~KiKvg~~~-d~~~v-~avr~a-------~-~~~~l~vDaN-~~~~~~~a-----~~~~~l 224 (386)
T 1wue_A 161 DLPQLLKQVQLAVEKGYQRVKLKIRPGY-DVEPV-ALIRQH-------F-PNLPLMVDAN-SAYTLADL-----PQLQRL 224 (386)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECBTTB-SHHHH-HHHHHH-------C-TTSCEEEECT-TCCCGGGH-----HHHHGG
T ss_pred CHHHHHHHHHHHHHhhhheEEEeeCcHH-HHHHH-HHHHHh-------C-CCCeEEEeCC-CCCCHHHH-----HHHHHH
Confidence 456677777888899999874 22211 22333 556664 2 3444444432 22344443 224444
Q ss_pred CCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCcccc
Q 035739 125 QMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSINQ 203 (335)
Q Consensus 125 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q 203 (335)
. ..++.++-.|... +-++.+.++.+.-.|. ..|=+-++...+.++++.... .++|
T Consensus 225 ~--~~~i~~iEqP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~--d~i~ 280 (386)
T 1wue_A 225 D--HYQLAMIEQPFAA--------------------DDFLDHAQLQRELKTRICLDENIRSLKDCQVALALGSC--RSIN 280 (386)
T ss_dssp G--GSCCSCEECCSCT--------------------TCSHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCC--SEEE
T ss_pred H--hCCCeEEeCCCCc--------------------ccHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCC--CEEE
Confidence 3 3466778877542 1235566676654443 555666788899998876543 3555
Q ss_pred CCCCcc---cccHHHHHHHHHcCCeEEEeccCCC
Q 035739 204 VEMHPV---WQQRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 204 ~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
+..+-+ ..-.++..+|+++|+.++..+.+.+
T Consensus 281 ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 314 (386)
T 1wue_A 281 LKIPRVGGIHEALKIAAFCQENDLLVWLGGMFES 314 (386)
T ss_dssp ECHHHHTSHHHHHHHHHHHHHTTCEEEECCCCCC
T ss_pred EchhhhCCHHHHHHHHHHHHHCCCeEEECCCccc
Confidence 544332 2226789999999999987666543
No 201
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=22.69 E-value=3.9e+02 Score=23.40 Aligned_cols=154 Identities=12% Similarity=-0.014 Sum_probs=81.1
Q ss_pred hHHHHHHHHHHHHcCCCEeeCCCCcCC-HHH--HHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHh
Q 035739 48 TDALKLVVLEAIKLGYRHFDTAAMYGT-EKA--LGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSAL 124 (335)
Q Consensus 48 ~~~~~~~l~~A~~~Gin~~DtA~~Ygs-e~~--lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~L 124 (335)
.++..+.++.+++.|++.|-.--.-.. +.- .=+++++. -.+++-|..-.. ...+++...+-+ +.|+.+
T Consensus 117 ~e~~~~~a~~~~~~G~~~~KiKvg~~~~~~d~~~v~avr~~-------~g~~~~L~vDaN-~~~~~~~A~~~~-~~l~~~ 187 (332)
T 2ozt_A 117 GQAALEQWQQSWQRGQTTFKWKVGVMSPEEEQAILKALLAA-------LPPGAKLRLDAN-GSWDRATANRWF-AWLDRH 187 (332)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEECSSSCHHHHHHHHHHHHHH-------SCTTCEEEEECT-TCCCHHHHHHHH-HHHHHH
T ss_pred hHHHHHHHHHHHHcCCcEEEEEeCCCChHHHHHHHHHHHHH-------cCCCCEEEEccc-CCCCHHHHHHHH-HHHHhh
Confidence 345566677777888887754221111 211 12344443 123343333322 223444444333 234554
Q ss_pred CCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCcccc
Q 035739 125 QMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSINQ 203 (335)
Q Consensus 125 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q 203 (335)
+ -.++.++-.|... +-++.+.++.+.-.|. ..|=+.++...+.++++.... .++|
T Consensus 188 ~--~~~i~~iEqP~~~--------------------~d~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~a~--~~i~ 243 (332)
T 2ozt_A 188 G--NGKIEYVEQPLPP--------------------DQWQALLSLAQTVTTAIALDESVVSAAEVQRWVDRGWP--GFFV 243 (332)
T ss_dssp C--CTTEEEEECCSCT--------------------TCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCC--SEEE
T ss_pred c--cCCcceeECCCCC--------------------CCHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCC--CEEE
Confidence 2 1267788877432 1245556666553333 556677778888888875433 2344
Q ss_pred CCCCcccccHHHHHHHHHc--CCeEEEeccCCC
Q 035739 204 VEMHPVWQQRKLIEFCKAK--GIIVTAYSPLGA 234 (335)
Q Consensus 204 ~~~~~~~~~~~~l~~~~~~--gi~v~a~~pl~~ 234 (335)
+..+..-.-.++..+|+++ |+.++..+.+.+
T Consensus 244 ik~~~~GGi~~i~~~A~~~~~gi~~~~~~~~es 276 (332)
T 2ozt_A 244 IKTALFGDPDSLSLLLRRGLEPQRLVFSSALEG 276 (332)
T ss_dssp ECHHHHSCHHHHHHHHHTTCCGGGEEEBCCSCC
T ss_pred EChhhhCCHHHHHHHHHHhCCCCcEEEeCCcch
Confidence 3322221114788899999 999888766543
No 202
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=22.67 E-value=2.8e+02 Score=24.96 Aligned_cols=83 Identities=11% Similarity=0.045 Sum_probs=53.4
Q ss_pred HHHHcCCccEEE-ecCccHHHHHHHHHhcCCC---------------------CccccCCCCcccccHHHHHHHHHcCCe
Q 035739 168 ESQMLGLTKSIG-LSNFSRKKIETILTFATIP---------------------PSINQVEMHPVWQQRKLIEFCKAKGII 225 (335)
Q Consensus 168 ~l~~~Gkir~iG-vs~~~~~~l~~~~~~~~~~---------------------~~~~q~~~~~~~~~~~~l~~~~~~gi~ 225 (335)
.+...+.+.-++ +++-+.+..+++.+..+++ ++++- -..+.....++...|-++|+.
T Consensus 33 ~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~-i~tp~~~H~~~~~~al~aGkh 111 (398)
T 3dty_A 33 AALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVS-IATPNGTHYSITKAALEAGLH 111 (398)
T ss_dssp HHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEE-EESCGGGHHHHHHHHHHTTCE
T ss_pred HHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEE-ECCCcHHHHHHHHHHHHCCCe
Confidence 345566677675 7788777776666554432 11111 122223346788888899999
Q ss_pred EEEeccCCCCCCcCCCCccCChHHHHHHHHHhCC
Q 035739 226 VTAYSPLGAVGKIYGSNQVLENEALKEIAKARGK 259 (335)
Q Consensus 226 v~a~~pl~~~G~l~~~~~~~~~~~l~~la~~~g~ 259 (335)
|++=+|++. .+.+..++.++|++.|+
T Consensus 112 Vl~EKPla~--------~~~ea~~l~~~a~~~g~ 137 (398)
T 3dty_A 112 VVCEKPLCF--------TVEQAENLRELSHKHNR 137 (398)
T ss_dssp EEECSCSCS--------CHHHHHHHHHHHHHTTC
T ss_pred EEEeCCCcC--------CHHHHHHHHHHHHHcCC
Confidence 999999975 33345677888888775
No 203
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=22.50 E-value=3.6e+02 Score=22.87 Aligned_cols=122 Identities=10% Similarity=0.120 Sum_probs=64.5
Q ss_pred CChHHHHHHHHHHHHcC-CCEeeCCCCcCCHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHh
Q 035739 46 SDTDALKLVVLEAIKLG-YRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSAL 124 (335)
Q Consensus 46 ~~~~~~~~~l~~A~~~G-in~~DtA~~Ygse~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~L 124 (335)
.+.++..++++.+++.| +.++|.--.+.. .+-+.++..- . ..-.++++..-+....+.+.+...+++ .+.+
T Consensus 97 ~~~~~~~~ll~~~~~~g~~d~iDvEl~~~~--~~~~l~~~~~--~---~~~kvI~S~Hdf~~tP~~~el~~~~~~-~~~~ 168 (257)
T 2yr1_A 97 LNEAEVRRLIEAICRSGAIDLVDYELAYGE--RIADVRRMTE--E---CSVWLVVSRHYFDGTPRKETLLADMRQ-AERY 168 (257)
T ss_dssp SCHHHHHHHHHHHHHHTCCSEEEEEGGGTT--HHHHHHHHHH--H---TTCEEEEEEEESSCCCCHHHHHHHHHH-HHHT
T ss_pred CCHHHHHHHHHHHHHcCCCCEEEEECCCCh--hHHHHHHHHH--h---CCCEEEEEecCCCCCcCHHHHHHHHHH-HHhc
Confidence 36777888999999998 889987544432 3333333210 0 344566665544333333445544443 3456
Q ss_pred CCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHH
Q 035739 125 QMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILT 193 (335)
Q Consensus 125 g~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~ 193 (335)
|-|.+=+...-.- ..+...++++..++.+...+--|++|.-....+-+++.
T Consensus 169 gaDivKia~~a~s------------------~~D~l~ll~~~~~~~~~~~~P~I~~~MG~~G~~SRi~~ 219 (257)
T 2yr1_A 169 GADIAKVAVMPKS------------------PEDVLVLLQATEEARRELAIPLITMAMGGLGAITRLAG 219 (257)
T ss_dssp TCSEEEEEECCSS------------------HHHHHHHHHHHHHHHHHCSSCEEEEECTTTTHHHHHHG
T ss_pred CCCEEEEEeccCC------------------HHHHHHHHHHHHHHhccCCCCEEEEECCCCcchHHHHH
Confidence 6544333332211 11133344444455444456667777766666666655
No 204
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=22.44 E-value=3.1e+02 Score=24.50 Aligned_cols=83 Identities=10% Similarity=0.013 Sum_probs=51.7
Q ss_pred HHHHHHcCCccEEEecCccHHHHHHHHHhcC---------------CCCccccCCCCcccccHHHHHHHHHcCCeEEEec
Q 035739 166 MEESQMLGLTKSIGLSNFSRKKIETILTFAT---------------IPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYS 230 (335)
Q Consensus 166 L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~---------------~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~ 230 (335)
+..+.+...++-+++++-+.+..+++.+..+ ++.+++ ..+.....++...|-++|+.|+.-+
T Consensus 19 ~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i---~tp~~~H~~~~~~al~aGk~Vl~EK 95 (387)
T 3moi_A 19 APAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYI---ASPHQFHCEHVVQASEQGLHIIVEK 95 (387)
T ss_dssp HHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEE---CSCGGGHHHHHHHHHHTTCEEEECS
T ss_pred HHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEE---cCCcHHHHHHHHHHHHCCCceeeeC
Confidence 3444455567777888777665544443322 222222 2222334678888899999999999
Q ss_pred cCCCCCCcCCCCccCChHHHHHHHHHhCC
Q 035739 231 PLGAVGKIYGSNQVLENEALKEIAKARGK 259 (335)
Q Consensus 231 pl~~~G~l~~~~~~~~~~~l~~la~~~g~ 259 (335)
|++. .......+.++|++.|+
T Consensus 96 P~a~--------~~~e~~~l~~~a~~~g~ 116 (387)
T 3moi_A 96 PLTL--------SRDEADRMIEAVERAGV 116 (387)
T ss_dssp CCCS--------CHHHHHHHHHHHHHHTC
T ss_pred CccC--------CHHHHHHHHHHHHHhCC
Confidence 9975 23345677788888765
No 205
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=22.42 E-value=42 Score=31.79 Aligned_cols=22 Identities=9% Similarity=0.013 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHcCCCEeeCCC
Q 035739 49 DALKLVVLEAIKLGYRHFDTAA 70 (335)
Q Consensus 49 ~~~~~~l~~A~~~Gin~~DtA~ 70 (335)
.....+++.|++.|++++|||.
T Consensus 94 ~~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 94 ISSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp SCHHHHHHHHHHHTCEEEESSC
T ss_pred ccCHHHHHHHHHcCCCEEECCC
Confidence 3456899999999999999994
No 206
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=22.20 E-value=4.2e+02 Score=23.62 Aligned_cols=148 Identities=11% Similarity=0.065 Sum_probs=89.1
Q ss_pred ChHHHHHHHHHHHHc-CCCEeeCCCCc-C--CHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHH
Q 035739 47 DTDALKLVVLEAIKL-GYRHFDTAAMY-G--TEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLS 122 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~-Gin~~DtA~~Y-g--se~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~ 122 (335)
+.++..+..+.+++. |++.|-.=-.- . .....=+++++. --+++-|...... ..+.+.. .+.++
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~-------~g~~~~l~vDan~-~~~~~~a----~~~~~ 218 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRER-------VDSAVRIAIDGNG-KWDLPTC----QRFCA 218 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHH-------SCTTCEEEEECTT-CCCHHHH----HHHHH
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHH-------cCCCCcEEeeCCC-CCCHHHH----HHHHH
Confidence 567777788888999 99998643221 1 111222455553 2345666666532 2333332 22334
Q ss_pred HhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCccHHHHHHHHHhcCCCCcc
Q 035739 123 ALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIGLSNFSRKKIETILTFATIPPSI 201 (335)
Q Consensus 123 ~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~ 201 (335)
.| +..++.++..|... +-++.+.++++.-.+. ..|=+-++..++.++++.... .+
T Consensus 219 ~l--~~~~i~~iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~--d~ 274 (372)
T 3tj4_A 219 AA--KDLDIYWFEEPLWY--------------------DDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAV--AY 274 (372)
T ss_dssp HT--TTSCEEEEESCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCC--SE
T ss_pred HH--hhcCCCEEECCCCc--------------------hhHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCC--CE
Confidence 44 33467778777431 1256667777765454 555667788899999886543 46
Q ss_pred ccCCCCcc---cccHHHHHHHHHcCCeEEEec
Q 035739 202 NQVEMHPV---WQQRKLIEFCKAKGIIVTAYS 230 (335)
Q Consensus 202 ~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~ 230 (335)
+|+..+-+ ..-.++..+|+++|+.++..+
T Consensus 275 v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 306 (372)
T 3tj4_A 275 VQPDVTRLGGITEYIQVADLALAHRLPVVPHA 306 (372)
T ss_dssp ECCCTTTTTHHHHHHHHHHHHHHTTCCBCCCC
T ss_pred EEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 66665543 223678999999999987643
No 207
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=22.13 E-value=3.8e+02 Score=23.09 Aligned_cols=66 Identities=12% Similarity=0.167 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEec
Q 035739 159 YRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAYS 230 (335)
Q Consensus 159 ~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~ 230 (335)
...+...++.+++.+. .|.|-++.++.++++++..- . .+| ..+-...+.++++.+.+.|++++.|.
T Consensus 67 ~~Rv~pvi~~l~~~~v--~iSIDT~~~~Va~~al~aGa-~-iIN--DVs~g~~d~~m~~~va~~~~~~vlMH 132 (270)
T 4hb7_A 67 LNRVLPVVEAIVGFDV--KISVDTFRSEVAEACLKLGV-D-MIN--DQWAGLYDHRMFQIVAKYDAEIILMH 132 (270)
T ss_dssp HHHHHHHHHHHTTSSS--EEEEECSCHHHHHHHHHHTC-C-EEE--ETTTTSSCTHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHhhcCCC--eEEEECCCHHHHHHHHHhcc-c-eec--cccccccchhHHHHHHHcCCCeEEec
Confidence 3446667777776553 59999999999999998542 2 222 23333445789999999999999986
No 208
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=22.08 E-value=3.7e+02 Score=22.98 Aligned_cols=138 Identities=12% Similarity=-0.008 Sum_probs=72.2
Q ss_pred hHHHHHHHHHHHHcCCCEeeCCCCcCCHHHHHHHHHHHHHcCCCCCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCC
Q 035739 48 TDALKLVVLEAIKLGYRHFDTAAMYGTEKALGEAIAEALRLGLVSSREQLFITSKLWCQNAHRDHVIPALKKSLSALQME 127 (335)
Q Consensus 48 ~~~~~~~l~~A~~~Gin~~DtA~~Ygse~~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d 127 (335)
...+.+.+..+++....+ . ..+. ..+-+.+.+.+ +. ..+++++++ .-..+++..++.+
T Consensus 41 ~~~v~~a~~~~~~~~~~y--~--~~~~-~~l~~~la~~~--~~--~~~~i~~~~----------g~t~al~~~~~~~--- 98 (361)
T 3ftb_A 41 PKSFLNNIDEGIKNLGVY--P--DVNY-RRLNKSIENYL--KL--KDIGIVLGN----------GASEIIELSISLF--- 98 (361)
T ss_dssp CHHHHTTHHHHHHGGGSC--C--CTTC-HHHHHHHHHHH--TC--CSCEEEEES----------SHHHHHHHHHTTC---
T ss_pred CHHHHHHHHHHHHHhcCC--C--CccH-HHHHHHHHHHh--CC--CcceEEEcC----------CHHHHHHHHHHHc---
Confidence 356667777777763222 1 1112 33445555543 43 566666652 2345555555555
Q ss_pred ccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEec---CccHHHHHHHHHhcCCCCccccC
Q 035739 128 YLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLS---NFSRKKIETILTFATIPPSINQV 204 (335)
Q Consensus 128 ~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs---~~~~~~l~~~~~~~~~~~~~~q~ 204 (335)
|-+++..|... .....++.. ..++..+-+. +++.+.++++++. .+..++..
T Consensus 99 --d~vi~~~~~~~--------------------~~~~~~~~~--g~~~~~~~~~~~~~~~~~~l~~~l~~--~~~v~i~~ 152 (361)
T 3ftb_A 99 --EKILIIVPSYA--------------------EYEINAKKH--GVSVVFSYLDENMCIDYEDIISKIDD--VDSVIIGN 152 (361)
T ss_dssp --SEEEEEESCCT--------------------HHHHHHHHT--TCEEEEEECCTTSCCCHHHHHHHTTT--CSEEEEET
T ss_pred --CcEEEecCChH--------------------HHHHHHHHc--CCeEEEeecCcccCCCHHHHHHhccC--CCEEEEeC
Confidence 77777766321 222222221 2344455443 4556677766654 23333333
Q ss_pred CCCccc---c---cHHHHHHHHHcCCeEEEeccCC
Q 035739 205 EMHPVW---Q---QRKLIEFCKAKGIIVTAYSPLG 233 (335)
Q Consensus 205 ~~~~~~---~---~~~~l~~~~~~gi~v~a~~pl~ 233 (335)
+-|+.- . -.++.++|+++|+.++.-...+
T Consensus 153 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 187 (361)
T 3ftb_A 153 PNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFI 187 (361)
T ss_dssp TBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcch
Confidence 344431 1 1568889999999888765543
No 209
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=21.82 E-value=3.3e+02 Score=23.88 Aligned_cols=86 Identities=17% Similarity=0.098 Sum_probs=56.4
Q ss_pred HHHHHHHcCCccEEEecCccHHHHHHHHHhcCCC-------------CccccCCCCcccccHHHHHHHHHcCCeEEEecc
Q 035739 165 AMEESQMLGLTKSIGLSNFSRKKIETILTFATIP-------------PSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSP 231 (335)
Q Consensus 165 ~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~-------------~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~p 231 (335)
.+..+.+...++-+++++-+.+..+++.+..+++ ++++- -..+.....++...|-+.|+.|+.=+|
T Consensus 43 ~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~-i~tp~~~h~~~~~~al~aGk~Vl~EKP 121 (350)
T 3rc1_A 43 ALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVY-VPLPAVLHAEWIDRALRAGKHVLAEKP 121 (350)
T ss_dssp HHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEE-ECCCGGGHHHHHHHHHHTTCEEEEESS
T ss_pred HHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEE-ECCCcHHHHHHHHHHHHCCCcEEEeCC
Confidence 4556666667888899888877766665543321 12221 123333346788889999999999999
Q ss_pred CCCCCCcCCCCccCChHHHHHHHHHhCC
Q 035739 232 LGAVGKIYGSNQVLENEALKEIAKARGK 259 (335)
Q Consensus 232 l~~~G~l~~~~~~~~~~~l~~la~~~g~ 259 (335)
++. ...+...+.++|++.|+
T Consensus 122 ~a~--------~~~ea~~l~~~a~~~g~ 141 (350)
T 3rc1_A 122 LTT--------DRPQAERLFAVARERGL 141 (350)
T ss_dssp SCS--------SHHHHHHHHHHHHHTTC
T ss_pred CCC--------CHHHHHHHHHHHHHhCC
Confidence 975 23345677788888765
No 210
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=21.72 E-value=4.4e+02 Score=23.71 Aligned_cols=145 Identities=10% Similarity=0.052 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHcCCCEeeC-CCCc--CC-HH--HHHHHHHHHHHcCCCCCCCceEEeeccCCCCC-ChhhHHHHHHHHHH
Q 035739 50 ALKLVVLEAIKLGYRHFDT-AAMY--GT-EK--ALGEAIAEALRLGLVSSREQLFITSKLWCQNA-HRDHVIPALKKSLS 122 (335)
Q Consensus 50 ~~~~~l~~A~~~Gin~~Dt-A~~Y--gs-e~--~lG~~l~~~~~~g~~~~R~~~~i~tK~~~~~~-~~~~i~~~~e~sL~ 122 (335)
+..+..+.+.+.|++.|=. =-.. .+ +. .+=+++++. --+++-|...... .. +.+...+ +-+.|+
T Consensus 155 ~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~~~v~avR~a-------~G~d~~l~vDan~-~~~~~~~A~~-~~~~L~ 225 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKVCIIPNDKVSDKEIVAYLRELREV-------IGWDMDMMVDCLY-RWTDWQKARW-TFRQLE 225 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHHHHHHHHHH-------HCSSSEEEEECTT-CCSCHHHHHH-HHHHTG
T ss_pred HHHHHHHHHHHcCCCEEEecccCCCccCHHHHHHHHHHHHHH-------hCCCCeEEEECCC-CCCCHHHHHH-HHHHHh
Confidence 4556777888999998876 2221 11 11 222455554 1244555555532 23 3333322 223445
Q ss_pred HhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccE-EEecCccHHHHHHHHHhcCCCCcc
Q 035739 123 ALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKS-IGLSNFSRKKIETILTFATIPPSI 201 (335)
Q Consensus 123 ~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~-iGvs~~~~~~l~~~~~~~~~~~~~ 201 (335)
.+|+ .++..|... +-++.+.++++.-.|.- .|=+-++..++.++++.... ++
T Consensus 226 ~~~i-----~~iEeP~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~--d~ 278 (394)
T 3mqt_A 226 DIDL-----YFIEACLQH--------------------DDLIGHQKLAAAINTRLCGAEMSTTRFEAQEWLEKTGI--SV 278 (394)
T ss_dssp GGCC-----SEEESCSCT--------------------TCHHHHHHHHHHSSSEEEECTTCCHHHHHHHHHHHHCC--SE
T ss_pred hcCC-----eEEECCCCc--------------------ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCC--Ce
Confidence 5554 456666321 12456777777655653 44455678888888886554 46
Q ss_pred ccCCCCcc---cccHHHHHHHHHcCCeEEEec
Q 035739 202 NQVEMHPV---WQQRKLIEFCKAKGIIVTAYS 230 (335)
Q Consensus 202 ~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~ 230 (335)
+|+...-+ ..-.++...|+++|+.++..+
T Consensus 279 v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 310 (394)
T 3mqt_A 279 VQSDYNRCGGVTELLRIMDICEHHNAQLMPHN 310 (394)
T ss_dssp ECCCTTTSSCHHHHHHHHHHHHHHTCEECCCC
T ss_pred EecCccccCCHHHHHHHHHHHHHcCCEEeccC
Confidence 66655543 223678999999999998655
No 211
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=21.68 E-value=2.1e+02 Score=23.61 Aligned_cols=97 Identities=14% Similarity=0.178 Sum_probs=50.6
Q ss_pred hHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCc---cHHHH
Q 035739 112 HVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNF---SRKKI 188 (335)
Q Consensus 112 ~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~---~~~~l 188 (335)
.+.+.++ .++++|.+.|++...|.+.. ... +.++.+.++.++--++-.+++.+ ..+.+
T Consensus 31 ~~~~~l~-~~~~~G~~~vEl~~~~~~~~-----------------~~~-~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~ 91 (257)
T 3lmz_A 31 DLDTTLK-TLERLDIHYLCIKDFHLPLN-----------------STD-EQIRAFHDKCAAHKVTGYAVGPIYMKSEEEI 91 (257)
T ss_dssp CHHHHHH-HHHHTTCCEEEECTTTSCTT-----------------CCH-HHHHHHHHHHHHTTCEEEEEEEEEECSHHHH
T ss_pred CHHHHHH-HHHHhCCCEEEEecccCCCC-----------------CCH-HHHHHHHHHHHHcCCeEEEEeccccCCHHHH
Confidence 3444444 36789999999887664311 112 33444444444433454444433 34555
Q ss_pred HHHHHhc---CCCCccccCCCCccccc-HHHHHHHHHcCCeEEEeccC
Q 035739 189 ETILTFA---TIPPSINQVEMHPVWQQ-RKLIEFCKAKGIIVTAYSPL 232 (335)
Q Consensus 189 ~~~~~~~---~~~~~~~q~~~~~~~~~-~~~l~~~~~~gi~v~a~~pl 232 (335)
.+.++.+ +.+.+++ .+.... .++.+.|+++||.+. +.+.
T Consensus 92 ~~~i~~A~~lGa~~v~~----~p~~~~l~~l~~~a~~~gv~l~-lEn~ 134 (257)
T 3lmz_A 92 DRAFDYAKRVGVKLIVG----VPNYELLPYVDKKVKEYDFHYA-IHLH 134 (257)
T ss_dssp HHHHHHHHHHTCSEEEE----EECGGGHHHHHHHHHHHTCEEE-EECC
T ss_pred HHHHHHHHHhCCCEEEe----cCCHHHHHHHHHHHHHcCCEEE-EecC
Confidence 5555543 3332222 121122 678889999998653 4455
No 212
>3gyc_A Putative glycoside hydrolase; YP_001304622.1, structural GEN joint center for structural genomics, JCSG; HET: MSE; 1.85A {Parabacteroides distasonis atcc 8503}
Probab=21.66 E-value=34 Score=30.59 Aligned_cols=40 Identities=15% Similarity=0.080 Sum_probs=30.6
Q ss_pred cCCcceeeCcccCcc--ccccCCCChHHHHHHHHHHHHcCCCEe
Q 035739 25 NMPVIGLGCAVDKCL--RCAVDKSDTDALKLVVLEAIKLGYRHF 66 (335)
Q Consensus 25 ~vs~lg~G~~~~~~~--~~~~~~~~~~~~~~~l~~A~~~Gin~~ 66 (335)
+|.+|.+-+|-|.+. .+.+ .+-++....+.+|.+.|+|.+
T Consensus 13 ~~~~LaITmWDFSWytr~~PG--epf~DLD~afdEavERGYNTV 54 (393)
T 3gyc_A 13 EISPRAITMWDFSWLERRWPG--AGYEDWDQVLDELSERGYNAI 54 (393)
T ss_dssp CCCCEEEEEEETHHHHCCSTT--SSCSCHHHHHHHHHHTTCCEE
T ss_pred ccccceeeeehhhhhhhcCCC--CChhHHHHHHHHHHHcCCCeE
Confidence 899999999988652 1222 245678889999999999976
No 213
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=21.62 E-value=1.7e+02 Score=24.61 Aligned_cols=30 Identities=10% Similarity=0.135 Sum_probs=22.2
Q ss_pred HHHHHcCCccEEEecCccHHHHHHHHHhcC
Q 035739 167 EESQMLGLTKSIGLSNFSRKKIETILTFAT 196 (335)
Q Consensus 167 ~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~ 196 (335)
+.+++.|....+=+++|+...+.++.+...
T Consensus 124 ~~l~~~~~~~~v~~~SF~~~~l~~~~~~~p 153 (250)
T 3ks6_A 124 AGLERHSMLERTTFSSFLLASMDELWKATT 153 (250)
T ss_dssp HHHHHTTCGGGEEEEESCHHHHHHHHHHCC
T ss_pred HHHHhcCCCCCEEEEeCCHHHHHHHHHHCC
Confidence 344455777888999999998888876543
No 214
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=21.57 E-value=4.6e+02 Score=23.82 Aligned_cols=150 Identities=17% Similarity=0.176 Sum_probs=87.7
Q ss_pred ChHHHHHHHHHHHHcCCCEeeCCCC-------------------cC-CHHHHH------HHHHHHHHcCCCCCCCceEEe
Q 035739 47 DTDALKLVVLEAIKLGYRHFDTAAM-------------------YG-TEKALG------EAIAEALRLGLVSSREQLFIT 100 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~DtA~~-------------------Yg-se~~lG------~~l~~~~~~g~~~~R~~~~i~ 100 (335)
+.++..+.++.+++.|++.|-.-.. +. ....+. +++++. --+++-|.
T Consensus 153 ~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a-------~G~~~~l~ 225 (421)
T 4hnl_A 153 NLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEK-------YGNQFQML 225 (421)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHH-------HTTSSEEE
T ss_pred CHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHH-------hCCCceEe
Confidence 5677778888999999998743211 00 111111 334443 23455555
Q ss_pred eccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCcc-EEE
Q 035739 101 SKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTK-SIG 179 (335)
Q Consensus 101 tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir-~iG 179 (335)
.-... ..+.+...+- ++.| +..+++++-.|.+. +-++.+.+|++.-.|. ..|
T Consensus 226 vDan~-~~~~~~A~~~----~~~l--~~~~i~~iEeP~~~--------------------~d~~~~~~l~~~~~ipIa~d 278 (421)
T 4hnl_A 226 HDVHE-RLHPNQAIQF----AKAA--EPYQLFFLEDILPP--------------------DQSHWLTQLRSQSATPIATG 278 (421)
T ss_dssp EECTT-CSCHHHHHHH----HHHH--GGGCCSEEECCSCG--------------------GGGGGHHHHHTTCCCCEEEC
T ss_pred ccccc-cCCHHHHHHH----HHHh--hhhhhcccccCCcc--------------------cchHHHHHHHhcCCCCeecC
Confidence 55432 2333333322 2333 23456677776431 2356677787775554 566
Q ss_pred ecCccHHHHHHHHHhcCCCCccccCCCCcc---cccHHHHHHHHHcCCeEEEeccC
Q 035739 180 LSNFSRKKIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPL 232 (335)
Q Consensus 180 vs~~~~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl 232 (335)
=+.++...+.++++.... .++|+..+-+ ..-.++..+|+++|+.+...+..
T Consensus 279 E~~~~~~~~~~~i~~~a~--d~v~~d~~~~GGite~~~ia~~A~~~gi~v~~h~~~ 332 (421)
T 4hnl_A 279 ELFNNPMEWQELVKNRQI--DFMRAHVSQIGGITPALKLAHFCDAMGVRIAWHTPS 332 (421)
T ss_dssp TTCCSGGGTHHHHHTTCC--SEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred cceehhHHHHHHHhcCCc--eEEEeCCCCCCCHHHHHHHHHHHHHCCCeEEEeCCc
Confidence 677788888888886543 4666655433 12267889999999999876554
No 215
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=21.51 E-value=4.2e+02 Score=23.35 Aligned_cols=22 Identities=5% Similarity=0.187 Sum_probs=18.3
Q ss_pred HHHHHHHHHcCCeEEEeccCCC
Q 035739 213 RKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 213 ~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
.++.++|+++|+.++.=.+++.
T Consensus 197 ~~i~~~~~~~~~~li~De~~~~ 218 (422)
T 3fvs_A 197 ELVASLCQQHDVVCITDEVYQW 218 (422)
T ss_dssp HHHHHHHHHHTCEEEEECTTTT
T ss_pred HHHHHHHHHcCcEEEEEccchh
Confidence 6789999999999998776653
No 216
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=21.42 E-value=3.7e+02 Score=23.25 Aligned_cols=85 Identities=15% Similarity=0.098 Sum_probs=53.6
Q ss_pred HHHHHHcCCccEEEecCccHHHHHHHHHhcCCC--------------CccccCCCCcccccHHHHHHHHHcCCeEEEecc
Q 035739 166 MEESQMLGLTKSIGLSNFSRKKIETILTFATIP--------------PSINQVEMHPVWQQRKLIEFCKAKGIIVTAYSP 231 (335)
Q Consensus 166 L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~--------------~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~p 231 (335)
+..+.+.+.++-+++++-+.+...++.+..+++ ++++- -..+.....++...|-+.|+.|+.=.|
T Consensus 21 ~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~-i~tp~~~h~~~~~~al~~gk~vl~EKP 99 (330)
T 3e9m_A 21 VAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIY-IPTYNQGHYSAAKLALSQGKPVLLEKP 99 (330)
T ss_dssp HHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEE-ECCCGGGHHHHHHHHHHTTCCEEECSS
T ss_pred HHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEE-EcCCCHHHHHHHHHHHHCCCeEEEeCC
Confidence 445555566788889888877777666654431 11110 112222336777888899999999999
Q ss_pred CCCCCCcCCCCccCChHHHHHHHHHhCC
Q 035739 232 LGAVGKIYGSNQVLENEALKEIAKARGK 259 (335)
Q Consensus 232 l~~~G~l~~~~~~~~~~~l~~la~~~g~ 259 (335)
++. .......+.+.|++.|+
T Consensus 100 ~~~--------~~~e~~~l~~~a~~~g~ 119 (330)
T 3e9m_A 100 FTL--------NAAEAEELFAIAQEQGV 119 (330)
T ss_dssp CCS--------SHHHHHHHHHHHHHTTC
T ss_pred CCC--------CHHHHHHHHHHHHHcCC
Confidence 975 22344667777777764
No 217
>3qp1_A CVIR transcriptional regulator; quorum sensing, agonist, antagonist, LUXR, acylated homoseri lactone, transcription factor; HET: HL6; 1.55A {Chromobacterium violaceum} PDB: 3qp2_A* 3qp4_A* 3qp8_A*
Probab=21.35 E-value=3e+02 Score=21.60 Aligned_cols=83 Identities=13% Similarity=0.113 Sum_probs=58.6
Q ss_pred CChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccE---EEecCcc
Q 035739 108 AHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKS---IGLSNFS 184 (335)
Q Consensus 108 ~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~---iGvs~~~ 184 (335)
.+.+.+...+++..+.+|.+++=+..+..+.. +.... +-++|++
T Consensus 30 ~s~~~l~~~l~~~~~~~Gf~~~~y~~~~~~~~---------------------------------~~~~~~~~~~~~nyP 76 (182)
T 3qp1_A 30 ETENELKAFLDQVLSQAPSERLLLALGRLNNQ---------------------------------NQIQRLERVLNVSYP 76 (182)
T ss_dssp CSHHHHHHHHHHHHTTSSCSEEEEEEEEECTT---------------------------------SCEEEEEEEEESSSC
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEeecCCCc---------------------------------ccccchhhhhhcCCC
Confidence 45789999999999999999876666654421 11222 6889999
Q ss_pred HHHHHHHHHh--cCCCCccccCCCCcc--c-----------ccHHHHHHHHHcCC
Q 035739 185 RKKIETILTF--ATIPPSINQVEMHPV--W-----------QQRKLIEFCKAKGI 224 (335)
Q Consensus 185 ~~~l~~~~~~--~~~~~~~~q~~~~~~--~-----------~~~~~l~~~~~~gi 224 (335)
.+.++.+.+. ..++|++.... +.. . .+.++++.++++|+
T Consensus 77 ~~W~~~Y~~~~y~~~DPvv~~~~-~~~p~~W~~~~~~~~~~~~~~~~~~a~~~Gl 130 (182)
T 3qp1_A 77 SDWLDQYMKENYAQHDPILRIHL-GQGPVMWEERFNRAKGAEEKRFIAEATQNGM 130 (182)
T ss_dssp HHHHHHHHHTTGGGTCGGGGSCT-TSCCEEHHHHHHTCCSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHCCCcccCcchHhhc-CCCCEecCchhhcccChHHHHHHHHHHHcCC
Confidence 8888888764 34777776665 432 1 11568899999987
No 218
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=21.32 E-value=2.7e+02 Score=25.05 Aligned_cols=108 Identities=15% Similarity=0.141 Sum_probs=65.4
Q ss_pred CChHHHHHHHHHHHHcCCCEeeCCCCcC---------------------CHHHHHHHHHHHHHcCCCCCCCceEEeeccC
Q 035739 46 SDTDALKLVVLEAIKLGYRHFDTAAMYG---------------------TEKALGEAIAEALRLGLVSSREQLFITSKLW 104 (335)
Q Consensus 46 ~~~~~~~~~l~~A~~~Gin~~DtA~~Yg---------------------se~~lG~~l~~~~~~g~~~~R~~~~i~tK~~ 104 (335)
.+.+....+.+.+-+.|+-+|=|.-... +-.+|-+.-+ ....++|+|=.
T Consensus 75 l~~e~~~~L~~~~~~~Gi~~~st~fD~~svd~l~~~~v~~~KI~S~~~~N~pLL~~va~---------~gKPviLstGm- 144 (350)
T 3g8r_A 75 LQPEQMQKLVAEMKANGFKAICTPFDEESVDLIEAHGIEIIKIASCSFTDWPLLERIAR---------SDKPVVASTAG- 144 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCCEEEECSSSTTCHHHHHHHHT---------SCSCEEEECTT-
T ss_pred CCHHHHHHHHHHHHHcCCcEEeccCCHHHHHHHHHcCCCEEEECcccccCHHHHHHHHh---------hCCcEEEECCC-
Confidence 4778888899999999999885443221 2333222211 45567777654
Q ss_pred CCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC-CccEEEecCc
Q 035739 105 CQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLG-LTKSIGLSNF 183 (335)
Q Consensus 105 ~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~G-kir~iGvs~~ 183 (335)
.+-+.+..+++-.++. | . ++.+||+...+. .+.++ . -+.++..|++.= .+ -||.|.|
T Consensus 145 ---stl~Ei~~Ave~i~~~-g-~--~viLlhC~s~YP-------t~~~~---~----nL~aI~~Lk~~fp~l-pVG~SdH 202 (350)
T 3g8r_A 145 ---ARREDIDKVVSFMLHR-G-K--DLTIMHCVAEYP-------TPDDH---L----HLARIKTLRQQYAGV-RIGYSTH 202 (350)
T ss_dssp ---CCHHHHHHHHHHHHTT-T-C--CEEEEECCCCSS-------CCGGG---C----CTTHHHHHHHHCTTS-EEEEEEC
T ss_pred ---CCHHHHHHHHHHHHHc-C-C--CEEEEecCCCCC-------CCccc---C----CHHHHHHHHHHCCCC-CEEcCCC
Confidence 2568888888877664 5 2 799999875431 11111 1 134555565542 23 3899999
Q ss_pred cH
Q 035739 184 SR 185 (335)
Q Consensus 184 ~~ 185 (335)
+.
T Consensus 203 t~ 204 (350)
T 3g8r_A 203 ED 204 (350)
T ss_dssp CC
T ss_pred CC
Confidence 84
No 219
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=21.26 E-value=3.5e+02 Score=24.65 Aligned_cols=97 Identities=13% Similarity=0.097 Sum_probs=55.4
Q ss_pred HHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHHcCCccEEEecCccHHHHHHHHH
Q 035739 115 PALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEE-SQMLGLTKSIGLSNFSRKKIETILT 193 (335)
Q Consensus 115 ~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-l~~~Gkir~iGvs~~~~~~l~~~~~ 193 (335)
.++...+..+ +..=|-+++..+. +...+..+.. +...| ++.+-+...+.+.++++++
T Consensus 108 ~Ai~~al~al-~~~Gd~Vi~~~~~--------------------y~~~~~~~~~~~~~~G-~~~~~v~~~d~~~l~~ai~ 165 (430)
T 3ri6_A 108 AAISTAILTL-ARAGDSVVTTDRL--------------------FGHTLSLFQKTLPSFG-IEVRFVDVMDSLAVEHACD 165 (430)
T ss_dssp HHHHHHHHHH-CCTTCEEEEETTC--------------------CHHHHHHHHTHHHHTT-CEEEEECTTCHHHHHHHCC
T ss_pred HHHHHHHHHH-hCCCCEEEEcCCC--------------------chhHHHHHHHHHHHcC-CEEEEeCCCCHHHHHHhhC
Confidence 5555555555 2334667776553 2344554442 23333 3344444446677776664
Q ss_pred hcCCCCccccCCCCcccc---cHHHHHHHHHcCCeEEEeccCCC
Q 035739 194 FATIPPSINQVEMHPVWQ---QRKLIEFCKAKGIIVTAYSPLGA 234 (335)
Q Consensus 194 ~~~~~~~~~q~~~~~~~~---~~~~l~~~~~~gi~v~a~~pl~~ 234 (335)
. +...+++..+.|+.-. -.++.++|+++|+.++.=..++.
T Consensus 166 ~-~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~ 208 (430)
T 3ri6_A 166 E-TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTP 208 (430)
T ss_dssp T-TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSC
T ss_pred C-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcc
Confidence 2 2233444445555433 26899999999999998877765
No 220
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=21.05 E-value=4.8e+02 Score=23.83 Aligned_cols=150 Identities=13% Similarity=0.124 Sum_probs=87.3
Q ss_pred ChHHHHHHHHHHHHcCCCEeeC--CC-----CcCC--------------------------H--HHHHHHHHHHHHcCCC
Q 035739 47 DTDALKLVVLEAIKLGYRHFDT--AA-----MYGT--------------------------E--KALGEAIAEALRLGLV 91 (335)
Q Consensus 47 ~~~~~~~~l~~A~~~Gin~~Dt--A~-----~Ygs--------------------------e--~~lG~~l~~~~~~g~~ 91 (335)
+.++..+.++.+++.|++.|=. .. .||. + ..+=+++|+.+
T Consensus 149 ~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~av----- 223 (424)
T 3v3w_A 149 DLDSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDVFAAVRKEF----- 223 (424)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHHHHHHHHHH-----
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHc-----
Confidence 5678888889999999998742 21 2220 0 11124455531
Q ss_pred CCCCceEEeeccCCCCCChhhHHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 035739 92 SSREQLFITSKLWCQNAHRDHVIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQM 171 (335)
Q Consensus 92 ~~R~~~~i~tK~~~~~~~~~~i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~ 171 (335)
-+++-|..... ...+.+...+ +-+.|+.++++ ++..|... +-++.+.++++
T Consensus 224 --G~d~~l~vDaN-~~~~~~~A~~-~~~~L~~~~i~-----~iEqP~~~--------------------~d~~~~~~l~~ 274 (424)
T 3v3w_A 224 --GPDIHLLHDVH-HRLTPIEAAR-LGKALEPYHLF-----WMEDAVPA--------------------ENQESFKLIRQ 274 (424)
T ss_dssp --CSSSEEEEECT-TCCCHHHHHH-HHHHHGGGCCS-----EEECCSCC--------------------SSTTHHHHHHH
T ss_pred --CCCCcEEEeCC-CCCCHHHHHH-HHHHHHhcCCC-----EEECCCCh--------------------HhHHHHHHHHh
Confidence 23455555653 2333433322 22345566544 45666331 11345666776
Q ss_pred cCCcc-EEEecCccHHHHHHHHHhcCCCCccccCCCCcc---cccHHHHHHHHHcCCeEEEeccC
Q 035739 172 LGLTK-SIGLSNFSRKKIETILTFATIPPSINQVEMHPV---WQQRKLIEFCKAKGIIVTAYSPL 232 (335)
Q Consensus 172 ~Gkir-~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~---~~~~~~l~~~~~~gi~v~a~~pl 232 (335)
.-.|. ..|=+-++...+.++++.... .++|+...-+ ..-.++..+|+++|+.++..+.+
T Consensus 275 ~~~iPIa~dE~~~~~~~~~~~i~~ga~--d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 337 (424)
T 3v3w_A 275 HTTTPLAVGEVFNSIHDCRELIQNQWI--DYIRTTIVHAGGISQMRRIADFASLFHVRTGFHGAT 337 (424)
T ss_dssp HCCSCEEECTTCCSGGGTHHHHHTTCC--SEECCCTTTTTHHHHHHHHHHHHHTTTCEEEECCCT
T ss_pred hCCCCEEEccCcCCHHHHHHHHHcCCC--CeEeecchhcCCHHHHHHHHHHHHHcCCEEEecCCC
Confidence 65555 344455667888888885543 4666665543 22367899999999999888775
No 221
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=20.46 E-value=5.5e+02 Score=24.96 Aligned_cols=19 Identities=21% Similarity=0.181 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHcCCCEeeC
Q 035739 50 ALKLVVLEAIKLGYRHFDT 68 (335)
Q Consensus 50 ~~~~~l~~A~~~Gin~~Dt 68 (335)
+..+.-++|.++|+..+|-
T Consensus 157 ~f~~aA~~a~~aGfDgVei 175 (690)
T 3k30_A 157 WHRNAVRRSIEAGYDIVYV 175 (690)
T ss_dssp HHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEE
Confidence 3344445677889998876
No 222
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=20.36 E-value=97 Score=26.96 Aligned_cols=21 Identities=10% Similarity=0.112 Sum_probs=14.2
Q ss_pred hhhHHHHHHHHHHHhCCCccc
Q 035739 110 RDHVIPALKKSLSALQMEYLD 130 (335)
Q Consensus 110 ~~~i~~~~e~sL~~Lg~d~iD 130 (335)
.+.+.+.+-..++.-|...++
T Consensus 107 Dd~lL~~i~~~~e~~G~~vi~ 127 (283)
T 4ggi_A 107 DDALLRRVLDEFEKEGFEIEG 127 (283)
T ss_dssp TTHHHHHHHHHHHHTTCCCCC
T ss_pred cchhHHHHHHHHHhCCcceec
Confidence 456677777778887765543
No 223
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=20.29 E-value=1.9e+02 Score=20.74 Aligned_cols=64 Identities=9% Similarity=0.090 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCccccCCCCcccccHHHHHHHHHcCCeEEEe
Q 035739 159 YRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPSINQVEMHPVWQQRKLIEFCKAKGIIVTAY 229 (335)
Q Consensus 159 ~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~~l~~~~~~gi~v~a~ 229 (335)
.+.+...|.-..+.|++. .|. .+..++++......+++--..++. ....+..+|+.++|+++.|
T Consensus 7 ~~~i~~~L~la~kagklv-~G~-----~~v~kai~~gkaklViiA~D~~~~-~~~~i~~~c~~~~ip~~~~ 70 (104)
T 4a18_G 7 QDNIQSKLALVMRSGKAT-LGY-----KSTIKAIRNGTAKLVFISNNCPTV-RKSEIEYYASLAQISIHHF 70 (104)
T ss_dssp -CHHHHHHHHHHHHSEEE-ESH-----HHHHHHHHHTCCCEEEECTTSCHH-HHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHHHhCCEe-ECH-----HHHHHHHHcCCceEEEEeCCCCHH-HHHHHHHHHHHcCCcEEEe
Confidence 345778888888888863 343 677788887776666666666543 2356778899999999864
No 224
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=20.29 E-value=3.8e+02 Score=23.34 Aligned_cols=92 Identities=14% Similarity=0.219 Sum_probs=59.8
Q ss_pred HHhCCCccceEEee-cCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCccHHHHHHHHHhcCCCCc
Q 035739 122 SALQMEYLDLYLVH-WPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQMLGLTKSIGLSNFSRKKIETILTFATIPPS 200 (335)
Q Consensus 122 ~~Lg~d~iDl~~lH-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~Gkir~iGvs~~~~~~l~~~~~~~~~~~~ 200 (335)
-.-|-|.||+=--. +|...... .......+...++.+++.+. -|.|-+++++.++++++... ..
T Consensus 62 v~~GAdIIDIGgeSTrPga~~v~-----------~~eE~~Rv~pvI~~l~~~~v--piSIDT~~~~Va~aAl~aGa--~i 126 (294)
T 2dqw_A 62 VAEGADILDLGAESTRPGAAPVP-----------VEEEKRRLLPVLEAVLSLGV--PVSVDTRKPEVAEEALKLGA--HL 126 (294)
T ss_dssp HHHTCSEEEEECC----------------------CCHHHHHHHHHHHHHTTCS--CEEEECSCHHHHHHHHHHTC--SE
T ss_pred HHCCCCEEEECCCcCCCCCCCCC-----------HHHHHHHHHHHHHHHHhCCC--eEEEECCCHHHHHHHHHhCC--CE
Confidence 34578888887533 23211000 02236678888888887633 48999999999999999732 23
Q ss_pred cccCCCCcccccHHHHHHHHHcCCeEEEecc
Q 035739 201 INQVEMHPVWQQRKLIEFCKAKGIIVTAYSP 231 (335)
Q Consensus 201 ~~q~~~~~~~~~~~~l~~~~~~gi~v~a~~p 231 (335)
+|- .+.. ...++++.++++|.+++.+..
T Consensus 127 INd--Vsg~-~d~~m~~v~a~~~~~vVlmh~ 154 (294)
T 2dqw_A 127 LND--VTGL-RDERMVALAARHGVAAVVMHM 154 (294)
T ss_dssp EEC--SSCS-CCHHHHHHHHHHTCEEEEECC
T ss_pred EEE--CCCC-CChHHHHHHHHhCCCEEEEcC
Confidence 443 3333 457899999999999999854
No 225
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=20.09 E-value=1.1e+02 Score=26.42 Aligned_cols=54 Identities=22% Similarity=0.132 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhCCCccceEEeecCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-cCCccE
Q 035739 113 VIPALKKSLSALQMEYLDLYLVHWPISSKPGELGFPEPKEDLLPMDYRGVWEAMEESQM-LGLTKS 177 (335)
Q Consensus 113 i~~~~e~sL~~Lg~d~iDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~-~Gkir~ 177 (335)
.++.+.+.|++||+..=|.+++|..-..-- +-......++++|.++.. +|-+-.
T Consensus 16 t~~~l~~~L~~LGi~~Gd~llVHsSl~~lG-----------~v~gg~~~vi~AL~~~vg~~GTLvm 70 (268)
T 3ijw_A 16 TIKTITNDLRKLGLKKGMTVIVHSSLSSIG-----------WISGGAVAVVEALMEVITEEGTIIM 70 (268)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEEECTGGGC-----------CBTTHHHHHHHHHHHHHCTTSEEEE
T ss_pred CHHHHHHHHHHcCCCCCCEEEEEechHHhC-----------CCCCCHHHHHHHHHHHhCCCCeEEE
Confidence 467788888999999999999997543211 111235678888888865 565443
Done!