Query 035742
Match_columns 214
No_of_seqs 316 out of 2131
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 09:45:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035742.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035742hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ogq_A PGIP-2, polygalacturona 99.9 1.2E-22 4.2E-27 166.4 8.4 128 1-138 8-143 (313)
2 4eco_A Uncharacterized protein 99.8 1.1E-20 3.8E-25 168.5 7.6 129 1-138 32-267 (636)
3 3rgz_A Protein brassinosteroid 99.8 3.5E-20 1.2E-24 168.4 8.4 128 1-138 14-169 (768)
4 4ecn_A Leucine-rich repeat pro 99.8 1.6E-19 5.6E-24 165.5 7.7 144 1-152 271-524 (876)
5 4fcg_A Uncharacterized protein 99.7 2E-18 6.7E-23 142.3 1.2 128 1-138 29-168 (328)
6 2o6s_A Variable lymphocyte rec 99.7 1.3E-16 4.4E-21 122.7 9.7 108 30-138 1-118 (208)
7 1w8a_A SLIT protein; signaling 99.7 9.9E-17 3.4E-21 122.3 8.5 109 30-138 2-120 (192)
8 3g39_A Variable lymphocyte rec 99.7 2.1E-16 7.1E-21 118.3 8.6 109 30-139 3-121 (170)
9 2o6r_A Variable lymphocyte rec 99.7 2.3E-16 8E-21 118.4 8.7 108 30-138 1-118 (177)
10 3e6j_A Variable lymphocyte rec 99.6 6.3E-16 2.1E-20 121.0 9.5 119 34-153 17-145 (229)
11 2wfh_A SLIT homolog 2 protein 99.6 6.5E-16 2.2E-20 117.9 8.3 113 30-144 4-127 (193)
12 3rgz_A Protein brassinosteroid 99.6 3.8E-16 1.3E-20 141.9 7.4 104 46-150 631-734 (768)
13 2v9t_B SLIT homolog 2 protein 99.6 1E-15 3.5E-20 119.1 8.4 109 29-138 4-122 (220)
14 2v70_A SLIT-2, SLIT homolog 2 99.6 1.8E-15 6.1E-20 117.7 7.9 109 30-138 5-123 (220)
15 2r9u_A Variable lymphocyte rec 99.6 6E-15 2.1E-19 110.7 8.7 110 29-139 5-124 (174)
16 4b8c_D Glucose-repressible alc 99.5 9E-15 3.1E-19 132.2 6.6 129 47-179 224-363 (727)
17 2ifg_A High affinity nerve gro 99.5 3.5E-14 1.2E-18 117.2 7.7 104 30-135 1-118 (347)
18 1w8a_A SLIT protein; signaling 99.5 4.7E-14 1.6E-18 107.4 5.7 93 45-138 52-144 (192)
19 2v70_A SLIT-2, SLIT homolog 2 99.5 9.6E-14 3.3E-18 107.9 7.5 107 46-153 56-163 (220)
20 3m19_A Variable lymphocyte rec 99.5 1.8E-13 6.3E-18 108.1 9.1 89 48-137 36-124 (251)
21 2z66_A Variable lymphocyte rec 99.5 6.1E-14 2.1E-18 113.7 6.4 106 30-137 1-118 (306)
22 2xot_A Amphoterin-induced prot 99.5 9.9E-14 3.4E-18 115.4 7.5 109 28-137 10-129 (361)
23 3rfs_A Internalin B, repeat mo 99.4 2.1E-13 7.2E-18 109.1 8.1 87 48-135 86-172 (272)
24 4g8a_A TOLL-like receptor 4; l 99.4 1.1E-13 3.9E-18 121.8 6.5 90 47-137 52-141 (635)
25 2z81_A CD282 antigen, TOLL-lik 99.4 6.9E-14 2.4E-18 121.9 4.9 99 34-134 2-112 (549)
26 2v9t_B SLIT homolog 2 protein 99.4 1.9E-13 6.6E-18 106.2 7.0 92 46-138 55-146 (220)
27 1ogq_A PGIP-2, polygalacturona 99.4 7.5E-14 2.6E-18 114.0 4.8 92 46-138 75-167 (313)
28 3v47_A TOLL-like receptor 5B a 99.4 1.1E-13 3.9E-18 117.8 6.1 108 30-138 4-121 (455)
29 2o6s_A Variable lymphocyte rec 99.4 3.2E-13 1.1E-17 103.7 7.9 133 46-179 51-187 (208)
30 2o6q_A Variable lymphocyte rec 99.4 2.9E-13 9.9E-18 108.1 7.0 89 48-137 38-126 (270)
31 2r9u_A Variable lymphocyte rec 99.4 8.8E-13 3E-17 98.8 8.6 100 50-153 15-115 (174)
32 3zyi_A Leucine-rich repeat-con 99.4 5.3E-13 1.8E-17 114.1 8.1 109 28-137 44-164 (452)
33 2id5_A Lingo-1, leucine rich r 99.4 6.6E-13 2.3E-17 113.9 8.3 108 30-138 3-122 (477)
34 3e6j_A Variable lymphocyte rec 99.4 9.9E-13 3.4E-17 102.7 8.4 90 46-137 63-152 (229)
35 3g39_A Variable lymphocyte rec 99.4 7.9E-13 2.7E-17 98.7 7.3 101 49-153 11-112 (170)
36 3rfs_A Internalin B, repeat mo 99.4 7.6E-13 2.6E-17 105.8 7.4 133 46-179 108-244 (272)
37 2z80_A TOLL-like receptor 2, v 99.4 2.5E-13 8.6E-18 112.4 4.7 103 33-137 27-141 (353)
38 3m19_A Variable lymphocyte rec 99.4 1.1E-12 3.6E-17 103.7 8.0 91 46-137 58-148 (251)
39 2xwt_C Thyrotropin receptor; s 99.4 2.7E-13 9.3E-18 106.2 4.4 108 30-139 4-123 (239)
40 2o6r_A Variable lymphocyte rec 99.4 1E-12 3.5E-17 98.3 7.2 93 46-139 51-143 (177)
41 2je0_A Acidic leucine-rich nuc 99.4 4.9E-13 1.7E-17 97.2 5.2 85 48-135 43-128 (149)
42 1ozn_A Reticulon 4 receptor; N 99.4 1.5E-12 5.3E-17 104.4 7.9 89 48-137 33-122 (285)
43 2ft3_A Biglycan; proteoglycan, 99.4 1.2E-12 4.2E-17 107.4 7.4 105 29-137 26-140 (332)
44 3zyj_A Leucine-rich repeat-con 99.3 2.1E-12 7.1E-17 110.0 8.6 109 28-137 33-153 (440)
45 3t6q_A CD180 antigen; protein- 99.3 9.2E-13 3.1E-17 116.1 6.6 105 30-135 4-120 (606)
46 2wfh_A SLIT homolog 2 protein 99.3 2.1E-12 7.1E-17 98.4 7.2 90 46-136 53-142 (193)
47 4fcg_A Uncharacterized protein 99.3 1.3E-12 4.5E-17 107.3 6.5 90 46-138 182-271 (328)
48 2ell_A Acidic leucine-rich nuc 99.3 6.6E-13 2.3E-17 98.5 3.8 84 48-134 25-109 (168)
49 4b8c_D Glucose-repressible alc 99.3 5.7E-13 2E-17 120.4 4.1 101 46-150 246-361 (727)
50 1dce_A Protein (RAB geranylger 99.3 1.5E-12 5E-17 114.7 6.3 81 49-135 443-523 (567)
51 1xku_A Decorin; proteoglycan, 99.3 3.6E-12 1.2E-16 104.4 8.3 106 29-138 24-139 (330)
52 3vq2_A TLR4, TOLL-like recepto 99.3 3.2E-12 1.1E-16 112.6 7.9 90 47-137 32-121 (606)
53 3oja_A Leucine-rich immune mol 99.3 3.4E-12 1.2E-16 110.3 6.9 116 35-153 108-224 (487)
54 2z62_A TOLL-like receptor 4, v 99.3 4.6E-12 1.6E-16 101.2 6.6 86 48-134 53-138 (276)
55 3v47_A TOLL-like receptor 5B a 99.3 4.5E-12 1.5E-16 107.9 6.7 89 48-137 276-364 (455)
56 2je0_A Acidic leucine-rich nuc 99.3 5.1E-12 1.8E-16 91.8 6.0 105 47-154 17-124 (149)
57 1dce_A Protein (RAB geranylger 99.3 5.7E-12 1.9E-16 110.9 7.3 91 46-140 462-553 (567)
58 4ay9_X Follicle-stimulating ho 99.3 2.5E-12 8.7E-17 106.4 4.8 108 29-137 1-121 (350)
59 4ezg_A Putative uncharacterize 99.3 7.5E-12 2.5E-16 95.3 7.1 84 48-134 89-173 (197)
60 2xot_A Amphoterin-induced prot 99.3 4.2E-12 1.4E-16 105.6 6.0 93 45-138 62-154 (361)
61 1ziw_A TOLL-like receptor 3; i 99.3 6.2E-12 2.1E-16 112.3 7.3 103 34-137 2-114 (680)
62 2ell_A Acidic leucine-rich nuc 99.3 7.2E-12 2.5E-16 92.8 6.3 87 47-137 49-137 (168)
63 1p9a_G Platelet glycoprotein I 99.2 1.1E-11 3.9E-16 100.0 7.0 89 47-137 77-165 (290)
64 1wwl_A Monocyte differentiatio 99.2 4.9E-12 1.7E-16 103.0 4.8 89 46-136 94-189 (312)
65 4g8a_A TOLL-like receptor 4; l 99.2 1.3E-11 4.4E-16 108.7 7.7 89 46-135 75-163 (635)
66 3j0a_A TOLL-like receptor 5; m 99.2 5.3E-12 1.8E-16 115.8 5.4 96 38-135 16-112 (844)
67 4eco_A Uncharacterized protein 99.2 2.4E-12 8.3E-17 114.6 2.5 86 47-133 206-318 (636)
68 2o6q_A Variable lymphocyte rec 99.2 2.1E-11 7.3E-16 97.2 7.7 92 46-138 84-175 (270)
69 1ozn_A Reticulon 4 receptor; N 99.2 2.8E-11 9.5E-16 97.1 8.3 89 48-137 81-170 (285)
70 1p9a_G Platelet glycoprotein I 99.2 2E-11 6.8E-16 98.6 7.4 92 46-138 99-190 (290)
71 2z66_A Variable lymphocyte rec 99.2 9.7E-12 3.3E-16 100.7 5.2 85 49-134 128-213 (306)
72 2ifg_A High affinity nerve gro 99.2 1.2E-11 4.3E-16 101.8 5.9 85 51-138 12-98 (347)
73 4ezg_A Putative uncharacterize 99.2 8.6E-12 2.9E-16 95.0 4.5 93 48-143 67-159 (197)
74 3oja_B Anopheles plasmodium-re 99.2 9.4E-12 3.2E-16 110.0 5.3 89 48-137 76-164 (597)
75 2z62_A TOLL-like receptor 4, v 99.2 3.3E-11 1.1E-15 96.2 7.5 91 46-137 75-166 (276)
76 3vq2_A TLR4, TOLL-like recepto 99.2 3.2E-11 1.1E-15 106.2 7.3 87 47-134 56-142 (606)
77 3oja_B Anopheles plasmodium-re 99.2 3.3E-11 1.1E-15 106.4 7.3 91 47-138 51-141 (597)
78 3o6n_A APL1; leucine-rich repe 99.2 1.8E-11 6.2E-16 102.4 4.9 86 48-134 46-131 (390)
79 1a9n_A U2A', U2A'; complex (nu 99.2 2.5E-11 8.6E-16 90.7 5.1 83 48-134 43-127 (176)
80 4ecn_A Leucine-rich repeat pro 99.2 9.7E-12 3.3E-16 114.2 3.0 91 46-138 447-565 (876)
81 2z63_A TOLL-like receptor 4, v 99.1 2.6E-11 8.7E-16 105.9 5.1 92 46-137 395-487 (570)
82 2z81_A CD282 antigen, TOLL-lik 99.1 3.4E-11 1.1E-15 104.8 5.8 91 46-137 49-140 (549)
83 3t6q_A CD180 antigen; protein- 99.1 3.4E-11 1.2E-15 106.1 5.7 94 45-139 55-149 (606)
84 1a9n_A U2A', U2A'; complex (nu 99.1 4.9E-11 1.7E-15 89.1 5.6 103 46-153 18-123 (176)
85 1xku_A Decorin; proteoglycan, 99.1 5.8E-11 2E-15 97.1 6.3 89 47-137 192-280 (330)
86 3o6n_A APL1; leucine-rich repe 99.1 7.6E-11 2.6E-15 98.6 6.9 90 47-138 69-159 (390)
87 3a79_B TLR6, VLRB.59, TOLL-lik 99.1 5.6E-11 1.9E-15 104.1 6.3 85 47-135 52-136 (562)
88 2z7x_B TOLL-like receptor 1, v 99.1 6.9E-11 2.4E-15 102.3 6.7 92 45-137 322-416 (520)
89 2id5_A Lingo-1, leucine rich r 99.1 6.3E-11 2.1E-15 101.6 6.3 91 46-137 55-145 (477)
90 3j0a_A TOLL-like receptor 5; m 99.1 6.3E-11 2.1E-15 108.7 6.2 92 46-137 47-140 (844)
91 2z63_A TOLL-like receptor 4, v 99.1 6.2E-11 2.1E-15 103.5 5.8 92 46-138 420-512 (570)
92 3o53_A Protein LRIM1, AGAP0063 99.1 1.2E-10 4E-15 95.0 7.0 113 38-153 111-224 (317)
93 2ft3_A Biglycan; proteoglycan, 99.1 5.8E-11 2E-15 97.3 5.1 89 47-137 193-281 (332)
94 2z7x_B TOLL-like receptor 1, v 99.1 4.5E-11 1.5E-15 103.5 4.5 84 47-134 45-129 (520)
95 3a79_B TLR6, VLRB.59, TOLL-lik 99.1 1.8E-10 6.2E-15 100.8 6.9 92 45-137 351-445 (562)
96 3oja_A Leucine-rich immune mol 99.0 9.7E-11 3.3E-15 101.2 4.6 94 46-143 143-237 (487)
97 4glp_A Monocyte differentiatio 99.0 1.5E-10 5.1E-15 94.0 5.4 86 48-134 92-183 (310)
98 3cvr_A Invasion plasmid antige 99.0 8.3E-11 2.8E-15 103.5 3.7 96 19-134 33-134 (571)
99 1ziw_A TOLL-like receptor 3; i 99.0 1.6E-10 5.4E-15 103.2 5.5 89 48-137 74-162 (680)
100 3zyj_A Leucine-rich repeat-con 99.0 2E-10 6.8E-15 97.7 5.9 90 46-138 184-273 (440)
101 1wwl_A Monocyte differentiatio 99.0 1.6E-10 5.6E-15 94.0 5.1 92 45-140 199-293 (312)
102 3zyi_A Leucine-rich repeat-con 99.0 2.2E-10 7.7E-15 97.7 6.1 90 46-138 195-284 (452)
103 2z80_A TOLL-like receptor 2, v 99.0 4.2E-10 1.4E-14 92.9 7.1 90 46-137 75-167 (353)
104 2xwt_C Thyrotropin receptor; s 99.0 1.7E-10 5.8E-15 90.2 3.6 89 46-137 54-148 (239)
105 4fmz_A Internalin; leucine ric 99.0 4.3E-10 1.5E-14 92.3 5.7 85 47-138 221-305 (347)
106 1h6t_A Internalin B; cell adhe 99.0 9.8E-10 3.4E-14 88.6 7.3 81 48-135 91-171 (291)
107 3o53_A Protein LRIM1, AGAP0063 99.0 3.6E-10 1.2E-14 92.1 4.5 91 47-141 144-235 (317)
108 1ds9_A Outer arm dynein; leuci 99.0 9.1E-12 3.1E-16 94.9 -4.7 82 47-134 48-129 (198)
109 1h6u_A Internalin H; cell adhe 99.0 1.3E-09 4.3E-14 88.7 7.6 80 48-134 86-165 (308)
110 1h6t_A Internalin B; cell adhe 99.0 1.6E-09 5.6E-14 87.3 7.9 97 46-150 67-163 (291)
111 1xeu_A Internalin C; cellular 98.9 1.4E-09 4.7E-14 86.5 7.2 98 47-153 63-160 (263)
112 1h6u_A Internalin H; cell adhe 98.9 1.5E-09 5.3E-14 88.1 7.5 90 46-143 62-151 (308)
113 1xeu_A Internalin C; cellular 98.9 1.4E-09 5E-14 86.4 7.1 99 45-152 83-181 (263)
114 4glp_A Monocyte differentiatio 98.9 3E-10 1E-14 92.2 2.7 87 47-135 145-239 (310)
115 1m9s_A Internalin B; cell inva 98.9 1.3E-09 4.3E-14 96.7 6.3 82 48-136 88-169 (605)
116 1m9s_A Internalin B; cell inva 98.9 2.4E-09 8.3E-14 94.8 7.6 89 47-143 109-197 (605)
117 4fmz_A Internalin; leucine ric 98.9 1.6E-09 5.5E-14 88.9 5.7 101 45-151 241-341 (347)
118 3cvr_A Invasion plasmid antige 98.8 2.5E-09 8.5E-14 94.1 4.7 82 47-138 160-248 (571)
119 1o6v_A Internalin A; bacterial 98.8 5E-09 1.7E-13 89.7 6.4 66 68-137 305-370 (466)
120 1o6v_A Internalin A; bacterial 98.8 6.7E-09 2.3E-13 88.9 7.1 82 48-136 244-325 (466)
121 1ds9_A Outer arm dynein; leuci 98.8 8.4E-11 2.9E-15 89.5 -5.1 87 47-138 70-158 (198)
122 3bz5_A Internalin-J, INLJ; leu 98.8 8.2E-09 2.8E-13 88.4 6.4 77 48-134 65-141 (457)
123 3bz5_A Internalin-J, INLJ; leu 98.7 2.3E-08 7.8E-13 85.7 8.4 78 47-134 170-247 (457)
124 2ca6_A RAN GTPase-activating p 98.7 1.3E-09 4.3E-14 91.1 -0.2 87 47-134 187-288 (386)
125 1jl5_A Outer protein YOPM; leu 98.7 1.2E-08 4.3E-13 87.2 6.0 58 72-137 317-376 (454)
126 3g06_A SSPH2 (leucine-rich rep 98.7 1.2E-08 4.2E-13 90.6 5.9 82 47-138 221-302 (622)
127 2ast_B S-phase kinase-associat 98.7 6.8E-09 2.3E-13 84.7 2.8 84 48-133 71-156 (336)
128 2ast_B S-phase kinase-associat 98.7 1.8E-09 6.3E-14 88.1 -0.9 85 48-133 94-182 (336)
129 2ca6_A RAN GTPase-activating p 98.7 3.1E-09 1E-13 88.7 0.3 89 47-135 159-259 (386)
130 3g06_A SSPH2 (leucine-rich rep 98.6 5.5E-09 1.9E-13 92.8 1.1 75 48-134 41-115 (622)
131 3goz_A Leucine-rich repeat-con 98.6 8.7E-09 3E-13 85.4 2.2 86 48-134 52-152 (362)
132 3goz_A Leucine-rich repeat-con 98.6 1.8E-08 6E-13 83.5 3.2 90 47-137 22-126 (362)
133 1jl5_A Outer protein YOPM; leu 98.6 5.6E-08 1.9E-12 83.1 5.9 79 47-134 131-209 (454)
134 3rw6_A Nuclear RNA export fact 98.5 7.3E-08 2.5E-12 76.8 3.5 83 52-137 148-237 (267)
135 1z7x_W Ribonuclease inhibitor; 98.4 1.6E-08 5.6E-13 85.9 -1.3 87 47-134 284-384 (461)
136 3rw6_A Nuclear RNA export fact 98.4 2.2E-07 7.6E-12 74.0 4.0 75 68-144 137-219 (267)
137 4ay9_X Follicle-stimulating ho 98.3 3.7E-07 1.3E-11 75.2 4.5 69 45-113 52-121 (350)
138 3sb4_A Hypothetical leucine ri 98.2 9.3E-07 3.2E-11 72.1 5.2 88 47-137 226-314 (329)
139 1z7x_W Ribonuclease inhibitor; 98.2 1.4E-07 4.7E-12 80.1 -0.1 86 48-134 86-184 (461)
140 3un9_A NLR family member X1; l 98.1 2.1E-07 7.2E-12 77.6 -0.7 85 48-133 127-224 (372)
141 3un9_A NLR family member X1; l 98.0 8.7E-07 3E-11 73.9 0.9 65 69-133 180-252 (372)
142 1io0_A Tropomodulin; LRR prote 97.9 3.2E-06 1.1E-10 63.4 1.0 88 46-134 35-137 (185)
143 3ogk_B Coronatine-insensitive 97.8 1.3E-06 4.3E-11 76.5 -1.7 63 71-133 462-526 (592)
144 1io0_A Tropomodulin; LRR prote 97.8 2.4E-06 8.3E-11 64.1 -0.8 87 46-133 64-164 (185)
145 3ogk_B Coronatine-insensitive 97.7 7.2E-06 2.5E-10 71.6 0.9 16 117-132 290-305 (592)
146 3e4g_A ATP synthase subunit S, 97.6 1.9E-05 6.4E-10 58.8 2.1 83 48-131 62-150 (176)
147 3sb4_A Hypothetical leucine ri 97.6 3.8E-05 1.3E-09 62.5 4.0 77 47-126 250-327 (329)
148 2p1m_B Transport inhibitor res 97.6 6.1E-06 2.1E-10 72.1 -1.5 62 71-132 455-518 (594)
149 2p1m_B Transport inhibitor res 97.4 2.7E-05 9.2E-10 68.0 0.3 84 47-131 105-195 (594)
150 2ra8_A Uncharacterized protein 97.2 9.4E-05 3.2E-09 61.3 1.1 87 47-134 193-293 (362)
151 3rfe_A Platelet glycoprotein I 97.0 0.00094 3.2E-08 47.0 5.0 56 51-109 12-68 (130)
152 3rfe_A Platelet glycoprotein I 96.9 0.002 7E-08 45.2 6.0 37 97-133 32-68 (130)
153 4fdw_A Leucine rich hypothetic 96.5 0.0028 9.6E-08 53.1 5.0 81 47-130 248-333 (401)
154 4fdw_A Leucine rich hypothetic 96.4 0.0026 8.8E-08 53.3 4.1 77 48-128 227-308 (401)
155 2ra8_A Uncharacterized protein 95.8 0.0015 5.3E-08 54.0 0.1 88 46-134 218-321 (362)
156 4fs7_A Uncharacterized protein 95.6 0.012 4E-07 48.8 4.6 77 48-128 298-374 (394)
157 1pgv_A TMD-1, tropomodulin TMD 95.4 0.0064 2.2E-07 45.9 2.2 84 46-130 40-136 (197)
158 4gt6_A Cell surface protein; l 95.2 0.024 8.1E-07 47.0 5.4 76 48-127 266-341 (394)
159 4h09_A Hypothetical leucine ri 95.0 0.028 9.7E-07 46.1 5.1 78 48-128 241-318 (379)
160 3e4g_A ATP synthase subunit S, 95.0 0.0057 2E-07 45.3 0.7 71 62-133 52-128 (176)
161 3omv_A RAF proto-oncogene seri 94.4 0.039 1.3E-06 44.5 4.4 31 180-213 266-296 (307)
162 4gt6_A Cell surface protein; l 94.4 0.041 1.4E-06 45.5 4.7 82 47-132 288-369 (394)
163 4gt4_A Tyrosine-protein kinase 94.4 0.04 1.4E-06 44.4 4.4 30 181-213 273-302 (308)
164 4aoj_A High affinity nerve gro 93.6 0.077 2.6E-06 43.1 4.7 29 182-213 287-315 (329)
165 4fs7_A Uncharacterized protein 93.2 0.057 1.9E-06 44.7 3.4 74 47-125 320-393 (394)
166 4asz_A BDNF/NT-3 growth factor 93.1 0.071 2.4E-06 42.7 3.8 29 182-213 257-285 (299)
167 4h09_A Hypothetical leucine ri 93.0 0.11 3.8E-06 42.5 4.8 80 48-130 264-343 (379)
168 1pgv_A TMD-1, tropomodulin TMD 91.5 0.05 1.7E-06 40.9 0.8 68 67-134 36-112 (197)
169 3hmm_A TGF-beta receptor type- 91.4 0.12 4.2E-06 41.3 3.1 46 167-213 248-293 (303)
170 2nru_A Interleukin-1 receptor- 90.0 0.42 1.4E-05 37.5 5.1 44 167-213 259-302 (307)
171 4ase_A Vascular endothelial gr 89.3 0.3 1E-05 40.0 3.8 38 170-213 306-343 (353)
172 3uim_A Brassinosteroid insensi 89.1 0.35 1.2E-05 38.3 4.1 30 184-213 278-307 (326)
173 3dtc_A Mitogen-activated prote 88.0 0.58 2E-05 35.9 4.5 30 182-214 241-270 (271)
174 3kmu_A ILK, integrin-linked ki 86.8 0.64 2.2E-05 35.5 4.1 29 182-213 238-266 (271)
175 3lb7_A RAF proto-oncogene seri 86.6 0.72 2.5E-05 36.4 4.4 30 181-213 267-296 (307)
176 2eva_A TAK1 kinase - TAB1 chim 86.3 0.72 2.5E-05 36.4 4.2 31 180-213 229-259 (307)
177 3og7_A AKAP9-BRAF fusion prote 86.1 0.55 1.9E-05 36.6 3.4 30 181-213 255-284 (289)
178 1xbb_A Tyrosine-protein kinase 86.0 1.2 4E-05 34.6 5.3 29 182-213 247-275 (291)
179 2qkw_B Protein kinase; three-h 84.1 0.88 3E-05 36.0 3.8 28 186-213 284-311 (321)
180 3kul_A Ephrin type-A receptor 83.8 1.1 3.8E-05 35.6 4.3 29 182-213 281-309 (325)
181 3sxs_A Cytoplasmic tyrosine-pr 83.8 1.4 4.8E-05 33.6 4.8 29 182-213 232-260 (268)
182 3f66_A Hepatocyte growth facto 83.8 1.2 4.2E-05 34.6 4.5 29 182-213 259-287 (298)
183 1luf_A Muscle-specific tyrosin 83.7 1.1 3.9E-05 35.5 4.3 29 182-213 303-331 (343)
184 3gxj_A TGF-beta receptor type- 83.4 0.82 2.8E-05 35.6 3.3 28 186-213 266-293 (303)
185 1byg_A CSK, protein (C-termina 83.2 1.5 5.3E-05 33.6 4.8 29 182-213 241-269 (278)
186 3vhe_A Vascular endothelial gr 83.0 1 3.5E-05 36.1 3.8 29 182-213 323-351 (359)
187 3q4u_A Activin receptor type-1 82.9 0.63 2.1E-05 36.2 2.4 26 188-213 273-298 (301)
188 3p86_A Serine/threonine-protei 82.7 1.2 4.3E-05 35.1 4.2 29 182-213 266-294 (309)
189 3pls_A Macrophage-stimulating 82.4 1.5 5E-05 34.0 4.4 29 182-213 255-283 (298)
190 3qup_A Tyrosine-protein kinase 82.3 1.7 5.7E-05 34.2 4.8 29 182-213 266-294 (323)
191 3brb_A Proto-oncogene tyrosine 82.2 1.7 5.9E-05 34.0 4.8 29 182-213 276-304 (313)
192 1u59_A Tyrosine-protein kinase 82.1 1.6 5.5E-05 33.7 4.6 29 182-213 240-268 (287)
193 4hcu_A Tyrosine-protein kinase 82.0 1.5 5.3E-05 33.5 4.4 29 182-213 234-262 (269)
194 3ugc_A Tyrosine-protein kinase 81.6 1 3.5E-05 35.0 3.2 29 182-213 259-287 (295)
195 4f0f_A Serine/threonine-protei 80.6 1.2 4.2E-05 34.4 3.4 30 182-214 257-286 (287)
196 1qpc_A LCK kinase; alpha beta 80.4 1.9 6.4E-05 33.1 4.4 29 182-213 237-265 (279)
197 3poz_A Epidermal growth factor 80.4 2.1 7.1E-05 34.0 4.7 25 189-213 250-274 (327)
198 2ivs_A Proto-oncogene tyrosine 80.3 2.1 7.1E-05 33.4 4.6 29 182-213 279-307 (314)
199 3g2f_A Bone morphogenetic prot 80.3 1.2 4E-05 35.3 3.2 29 182-213 286-314 (336)
200 1t46_A HOMO sapiens V-KIT hard 80.2 1.2 4.2E-05 34.7 3.3 29 182-213 275-303 (313)
201 3soc_A Activin receptor type-2 80.1 1.1 3.7E-05 35.6 2.9 27 187-213 288-314 (322)
202 3gen_A Tyrosine-protein kinase 80.0 2.1 7.2E-05 32.9 4.5 29 182-213 248-276 (283)
203 3cbl_A C-FES, proto-oncogene t 79.7 1.9 6.5E-05 35.1 4.3 29 182-213 342-370 (377)
204 3tt0_A Basic fibroblast growth 79.3 1.9 6.6E-05 35.1 4.3 29 182-213 320-348 (382)
205 3lxp_A Non-receptor tyrosine-p 79.3 1.3 4.5E-05 35.0 3.2 29 182-213 278-306 (318)
206 1p4o_A Insulin-like growth fac 78.9 1.4 4.7E-05 34.7 3.2 30 181-213 266-295 (322)
207 4e5w_A Tyrosine-protein kinase 78.9 1.5 5.1E-05 34.1 3.4 29 182-213 270-298 (302)
208 3lzb_A Epidermal growth factor 78.8 2.4 8.3E-05 33.6 4.7 29 182-213 246-274 (327)
209 1u46_A ACK-1, activated CDC42 78.8 2.4 8.1E-05 32.6 4.5 29 182-213 252-280 (291)
210 2xir_A Vascular endothelial gr 78.7 1.8 6.1E-05 33.8 3.8 29 182-213 278-306 (316)
211 3lxl_A Tyrosine-protein kinase 78.7 1.4 4.8E-05 34.9 3.2 29 182-213 271-299 (327)
212 2w1i_A JAK2; chromosomal rearr 78.4 1.4 5E-05 34.8 3.2 29 182-213 290-318 (326)
213 2psq_A Fibroblast growth facto 78.3 2.5 8.6E-05 34.3 4.7 29 182-213 332-360 (370)
214 1mp8_A Focal adhesion kinase 1 77.9 1.6 5.4E-05 33.7 3.2 29 182-213 244-272 (281)
215 1qcf_A Haematopoetic cell kina 77.9 1.8 6.2E-05 36.2 3.8 29 182-213 412-440 (454)
216 1mqb_A Ephrin type-A receptor 77.6 2.2 7.5E-05 34.0 4.1 29 182-213 277-305 (333)
217 3l9p_A Anaplastic lymphoma kin 77.6 2.4 8.2E-05 34.4 4.4 29 182-213 313-341 (367)
218 1b6c_B TGF-B superfamily recep 77.6 1.5 5E-05 34.8 3.0 27 187-213 306-332 (342)
219 2i1m_A Macrophage colony-stimu 77.3 2.1 7.1E-05 33.9 3.8 29 182-213 294-322 (333)
220 1rjb_A FL cytokine receptor; k 77.1 2.6 9E-05 33.4 4.4 29 182-213 302-330 (344)
221 3mdy_A Bone morphogenetic prot 77.0 1.6 5.4E-05 34.5 3.0 27 187-213 301-327 (337)
222 4hgt_A Casein kinase I isoform 76.9 1.9 6.5E-05 33.2 3.4 29 182-213 248-276 (296)
223 3c1x_A Hepatocyte growth facto 76.8 2.5 8.6E-05 34.4 4.2 29 182-213 323-351 (373)
224 1k9a_A Carboxyl-terminal SRC k 76.7 2.7 9.1E-05 35.2 4.5 29 182-213 413-441 (450)
225 2ozo_A Tyrosine-protein kinase 75.9 3.8 0.00013 35.9 5.4 29 182-213 566-594 (613)
226 3uzp_A CKI-delta, CKID, casein 75.7 2.1 7.3E-05 33.0 3.4 29 182-213 248-276 (296)
227 2w5a_A Serine/threonine-protei 75.7 1.7 5.8E-05 33.3 2.8 29 182-213 242-270 (279)
228 4fl3_A Tyrosine-protein kinase 75.1 4 0.00014 36.0 5.3 29 182-213 599-627 (635)
229 2v62_A Serine/threonine-protei 74.8 2.5 8.6E-05 33.8 3.7 29 182-213 296-324 (345)
230 3t9t_A Tyrosine-protein kinase 74.4 2.3 7.8E-05 32.3 3.2 29 182-213 232-260 (267)
231 3cc6_A Protein tyrosine kinase 74.4 2.1 7.2E-05 32.9 3.1 29 182-213 241-269 (281)
232 1fmk_A C-SRC, P60-SRC, tyrosin 74.2 3.4 0.00012 34.5 4.5 29 182-213 408-436 (452)
233 3kfa_A Tyrosine-protein kinase 72.7 2.1 7.2E-05 32.9 2.7 29 182-213 239-267 (288)
234 1csn_A Casein kinase-1; phosph 72.5 1.7 5.9E-05 33.6 2.1 23 191-213 257-279 (298)
235 4g3f_A NF-kappa-beta-inducing 71.9 4.1 0.00014 33.0 4.3 29 182-213 284-312 (336)
236 2qol_A Ephrin receptor; recept 71.6 1.8 6.1E-05 35.3 2.1 25 189-213 281-305 (373)
237 2y4i_B KSR2, HKSR2, kinase sup 70.7 2.2 7.5E-05 33.4 2.4 22 192-213 277-298 (319)
238 2jii_A Serine/threonine-protei 70.0 3.4 0.00012 33.0 3.4 29 182-213 304-332 (352)
239 2yfx_A Tyrosine-protein kinase 69.3 3.3 0.00011 32.6 3.2 29 182-213 272-300 (327)
240 2buj_A Serine/threonine-protei 68.8 2.9 9.9E-05 32.7 2.7 29 182-213 274-302 (317)
241 2pvf_A Fibroblast growth facto 68.6 3.3 0.00011 32.8 3.1 29 182-213 286-314 (334)
242 3is5_A Calcium-dependent prote 68.3 5.4 0.00018 30.7 4.2 26 182-210 253-278 (285)
243 2h8h_A Proto-oncogene tyrosine 67.6 5.7 0.0002 34.0 4.5 29 182-213 491-519 (535)
244 3s95_A LIMK-1, LIM domain kina 67.5 2 7E-05 33.6 1.6 22 192-213 257-278 (310)
245 4b9d_A Serine/threonine-protei 67.3 3.4 0.00012 33.7 2.9 39 169-210 238-276 (350)
246 1fvr_A Tyrosine-protein kinase 66.9 4.3 0.00015 32.0 3.4 29 182-213 268-296 (327)
247 3fpq_A Serine/threonine-protei 66.9 3.9 0.00013 32.3 3.1 26 182-210 257-282 (290)
248 3ox7_P MH027; urokinase-type p 66.4 1.7 5.8E-05 19.6 0.5 11 32-42 4-14 (23)
249 2wqm_A Serine/threonine-protei 66.2 2.8 9.4E-05 32.7 2.1 29 182-213 265-293 (310)
250 3q60_A ROP5B; pseudokinase, tr 63.9 6.1 0.00021 31.8 3.8 27 181-210 326-352 (371)
251 3dbq_A Dual specificity protei 63.9 7.5 0.00026 30.9 4.3 25 183-210 249-273 (343)
252 3op5_A Serine/threonine-protei 63.4 4.4 0.00015 32.6 2.8 29 182-213 297-325 (364)
253 4fvq_A Tyrosine-protein kinase 63.1 2.4 8.3E-05 32.6 1.2 21 193-213 251-271 (289)
254 2a19_B Interferon-induced, dou 62.6 4.6 0.00016 30.8 2.7 28 183-213 243-270 (284)
255 1x8b_A WEE1HU, WEE1-like prote 61.6 4.5 0.00015 30.8 2.5 27 181-210 253-279 (289)
256 1opk_A P150, C-ABL, proto-onco 60.8 4 0.00014 34.6 2.2 29 182-213 446-474 (495)
257 3kex_A Receptor tyrosine-prote 60.4 3.2 0.00011 32.7 1.5 22 192-213 251-272 (325)
258 2zmd_A Dual specificity protei 60.1 9.4 0.00032 31.1 4.3 26 182-210 295-320 (390)
259 3cek_A Dual specificity protei 59.1 10 0.00036 29.4 4.3 26 182-210 267-292 (313)
260 3sv0_A Casein kinase I-like; t 56.8 6.4 0.00022 33.4 2.8 26 188-213 249-274 (483)
261 3fdn_A Serine/threonine-protei 55.9 15 0.00051 27.9 4.7 26 182-210 232-257 (279)
262 2lz0_A Uncharacterized protein 55.6 15 0.00051 23.9 3.9 46 58-105 7-52 (100)
263 3ll6_A Cyclin G-associated kin 54.2 5.8 0.0002 31.0 2.0 21 193-213 284-304 (337)
264 1t4h_A Serine/threonine-protei 53.9 9 0.00031 29.4 3.1 25 183-210 258-282 (290)
265 3fme_A Dual specificity mitoge 51.8 11 0.00038 28.7 3.3 26 182-210 241-266 (290)
266 2j0j_A Focal adhesion kinase 1 50.8 8.2 0.00028 34.1 2.6 29 182-213 619-647 (656)
267 3hyh_A Carbon catabolite-derep 49.1 23 0.00078 27.6 4.7 26 182-210 237-262 (275)
268 1zy4_A Serine/threonine-protei 48.4 11 0.00037 28.8 2.7 26 182-210 258-283 (303)
269 2clq_A Mitogen-activated prote 46.8 14 0.00049 28.1 3.2 26 182-210 253-278 (295)
270 2izr_A Casein kinase I isoform 46.7 9.5 0.00032 30.0 2.2 23 191-213 255-277 (330)
271 3kk8_A Calcium/calmodulin depe 44.2 12 0.00042 28.4 2.4 26 182-210 236-261 (284)
272 3p1a_A MYT1 kinase, membrane-a 44.0 16 0.00054 28.4 3.1 26 182-210 279-304 (311)
273 2pml_X PFPK7, Ser/Thr protein 43.9 19 0.00065 28.3 3.6 26 182-210 297-322 (348)
274 1z57_A Dual specificity protei 43.7 14 0.00049 28.7 2.8 26 182-210 303-328 (339)
275 3qd2_B Eukaryotic translation 42.5 7.3 0.00025 30.4 0.9 19 192-210 307-325 (332)
276 4agu_A Cyclin-dependent kinase 42.4 13 0.00046 28.6 2.4 21 190-210 264-284 (311)
277 2ac3_A MAP kinase-interacting 41.9 22 0.00074 27.5 3.6 26 182-210 270-295 (316)
278 1q8y_A SR protein kinase; tran 41.9 17 0.0006 28.8 3.1 22 189-210 312-333 (373)
279 4eut_A Serine/threonine-protei 41.0 25 0.00087 28.4 4.0 31 180-213 275-305 (396)
280 2vwi_A Serine/threonine-protei 40.8 12 0.0004 28.7 1.8 26 182-210 262-287 (303)
281 3g33_A Cell division protein k 40.5 36 0.0012 26.1 4.7 19 192-210 278-296 (308)
282 2c30_A Serine/threonine-protei 40.4 19 0.00066 28.2 3.1 26 182-210 269-294 (321)
283 3m2w_A MAP kinase-activated pr 40.2 20 0.00067 27.6 3.1 26 182-210 231-256 (299)
284 3fhr_A MAP kinase-activated pr 39.9 16 0.00055 28.9 2.5 26 182-210 262-287 (336)
285 3a7i_A MST3 kinase, serine/thr 39.9 13 0.00043 28.7 1.9 26 182-210 245-270 (303)
286 2wtk_C Serine/threonine-protei 39.7 25 0.00085 26.9 3.6 26 182-210 238-263 (305)
287 2lz0_A Uncharacterized protein 39.5 27 0.00092 22.6 3.2 48 82-130 6-53 (100)
288 2eu9_A Dual specificity protei 39.1 19 0.00064 28.2 2.8 22 189-210 312-333 (355)
289 1u5q_A Serine/threonine protei 38.9 24 0.00083 28.1 3.5 26 182-210 280-305 (348)
290 2h34_A Serine/threonine-protei 38.8 14 0.00049 28.7 2.0 28 183-213 264-292 (309)
291 4g31_A Eukaryotic translation 38.6 8.6 0.0003 30.3 0.7 18 193-210 262-279 (299)
292 3niz_A Rhodanese family protei 38.2 22 0.00077 27.6 3.1 19 192-210 282-300 (311)
293 1wak_A Serine/threonine-protei 38.1 16 0.00056 29.2 2.3 24 187-210 368-391 (397)
294 1ob3_A PFPK5, cell division co 38.0 22 0.00077 27.1 3.1 26 182-210 255-280 (288)
295 3h4j_B AMPK kdaid, SNF1-like p 37.9 24 0.00084 28.0 3.3 26 182-210 233-258 (336)
296 2yex_A Serine/threonine-protei 37.3 19 0.00066 27.0 2.6 26 182-210 236-261 (276)
297 3uqc_A Probable conserved tran 37.3 19 0.00064 27.8 2.5 28 182-213 234-261 (286)
298 3eqc_A Dual specificity mitoge 36.9 30 0.001 27.4 3.7 26 182-210 299-324 (360)
299 2j7t_A Serine/threonine-protei 36.8 20 0.00069 27.4 2.6 26 182-210 250-275 (302)
300 2h6d_A 5'-AMP-activated protei 36.7 16 0.00055 27.6 2.0 19 192-210 243-261 (276)
301 3o0g_A Cell division protein k 36.4 20 0.00068 27.4 2.5 26 182-210 257-282 (292)
302 3e3p_A Protein kinase, putativ 36.4 20 0.00067 28.3 2.5 26 182-210 289-314 (360)
303 2eue_A Carbon catabolite derep 36.2 14 0.00049 27.9 1.6 25 183-210 238-262 (275)
304 3fxz_A Serine/threonine-protei 35.9 21 0.00071 27.6 2.6 26 182-210 244-269 (297)
305 3hko_A Calcium/calmodulin-depe 35.5 32 0.0011 26.9 3.7 26 182-210 305-330 (345)
306 3bhy_A Death-associated protei 35.4 20 0.00069 27.1 2.4 22 189-210 244-265 (283)
307 2vx3_A Dual specificity tyrosi 35.3 23 0.0008 28.4 2.9 23 188-210 350-372 (382)
308 2zv2_A Calcium/calmodulin-depe 35.2 22 0.00075 27.3 2.6 26 182-210 267-292 (298)
309 3llt_A Serine/threonine kinase 35.2 15 0.0005 29.2 1.6 22 189-210 334-355 (360)
310 2iwi_A Serine/threonine-protei 35.1 25 0.00085 27.1 2.9 26 182-210 258-283 (312)
311 3a99_A Proto-oncogene serine/t 34.8 19 0.00064 28.2 2.1 26 182-210 268-293 (320)
312 2r3i_A Cell division protein k 34.7 27 0.00093 26.6 3.1 26 182-210 258-283 (299)
313 4euu_A Serine/threonine-protei 34.7 38 0.0013 26.2 4.0 30 180-212 275-304 (319)
314 1blx_A Cyclin-dependent kinase 34.4 19 0.00067 27.9 2.2 26 182-210 271-296 (326)
315 2i6l_A Mitogen-activated prote 34.3 19 0.00066 27.7 2.1 26 182-210 280-305 (320)
316 2dyl_A Dual specificity mitoge 33.8 18 0.00063 27.9 1.9 26 182-210 258-283 (318)
317 3kvw_A DYRK2, dual specificity 33.5 28 0.00094 28.7 3.1 25 183-210 384-408 (429)
318 2wei_A Calmodulin-domain prote 33.0 26 0.00088 26.7 2.6 26 182-210 251-276 (287)
319 3coi_A Mitogen-activated prote 32.9 35 0.0012 26.9 3.5 26 182-210 280-305 (353)
320 2jam_A Calcium/calmodulin-depe 32.1 26 0.00089 26.9 2.6 26 182-210 236-261 (304)
321 4eqm_A Protein kinase; transfe 32.1 22 0.00076 27.3 2.1 29 182-213 242-271 (294)
322 2y0a_A Death-associated protei 31.9 27 0.00092 27.4 2.7 18 193-210 254-271 (326)
323 3f3z_A Calcium/calmodulin-depe 31.8 27 0.00091 26.3 2.5 26 182-210 236-261 (277)
324 3dls_A PAS domain-containing s 31.8 27 0.00092 27.6 2.6 26 182-210 249-274 (335)
325 2w4o_A Calcium/calmodulin-depe 31.5 28 0.00094 27.7 2.7 26 182-210 280-305 (349)
326 3com_A Serine/threonine-protei 31.5 27 0.00093 26.8 2.6 26 182-210 253-278 (314)
327 3gbz_A Kinase, CMGC CDK; ssgci 31.4 23 0.00078 27.8 2.1 19 192-210 300-318 (329)
328 3aln_A Dual specificity mitoge 31.4 14 0.00049 28.8 0.9 26 182-210 260-285 (327)
329 2rio_A Serine/threonine-protei 31.1 25 0.00085 29.0 2.4 22 189-210 274-295 (434)
330 2b9h_A MAP kinase FUS3, mitoge 30.6 24 0.00082 27.7 2.1 26 182-210 280-305 (353)
331 3lm5_A Serine/threonine-protei 30.3 19 0.00065 28.2 1.5 26 182-210 262-287 (327)
332 1phk_A Phosphorylase kinase; g 30.1 20 0.00068 27.4 1.5 26 182-210 258-283 (298)
333 2a2a_A Death-associated protei 30.0 39 0.0013 26.2 3.3 20 191-210 253-272 (321)
334 2y7j_A Phosphorylase B kinase 29.5 44 0.0015 26.6 3.6 20 191-210 340-359 (365)
335 3gni_B Strad alpha; kinase fol 29.5 30 0.001 27.8 2.6 24 184-210 310-333 (389)
336 4aaa_A Cyclin-dependent kinase 29.4 15 0.00051 28.8 0.7 26 182-210 281-306 (331)
337 3cok_A Serine/threonine-protei 29.3 17 0.00057 27.5 1.0 26 182-210 237-262 (278)
338 3tki_A Serine/threonine-protei 29.2 34 0.0012 26.8 2.8 26 182-210 236-261 (323)
339 3soa_A Calcium/calmodulin-depe 29.1 42 0.0014 27.9 3.5 27 181-210 241-267 (444)
340 3nsz_A CK II alpha, casein kin 28.9 24 0.00082 27.4 1.9 26 182-210 294-319 (330)
341 3an0_A Dual specificity mitoge 28.5 17 0.00059 28.5 0.9 26 182-210 285-310 (340)
342 1ua2_A CAK, cell division prot 28.5 34 0.0012 27.0 2.7 27 182-211 266-292 (346)
343 2x7f_A TRAF2 and NCK-interacti 28.1 28 0.00097 26.9 2.1 26 182-210 261-286 (326)
344 2vgo_A Serine/threonine-protei 27.7 29 0.001 26.2 2.1 26 182-210 237-262 (284)
345 4exu_A Mitogen-activated prote 27.2 43 0.0015 26.7 3.1 26 182-210 298-323 (371)
346 2ycf_A Serine/threonine-protei 27.2 33 0.0011 26.6 2.4 20 191-210 255-274 (322)
347 2xrw_A Mitogen-activated prote 26.6 41 0.0014 26.8 2.9 25 183-210 294-318 (371)
348 2pmi_A Negative RE, cyclin-dep 26.5 19 0.00064 28.1 0.8 26 182-210 268-293 (317)
349 1tki_A Titin; serine kinase, m 26.5 34 0.0012 26.7 2.4 20 191-210 238-257 (321)
350 3byv_A Rhoptry kinase; malaria 26.5 24 0.00084 28.2 1.5 26 182-210 334-359 (377)
351 3c0i_A Peripheral plasma membr 26.1 45 0.0015 26.4 3.1 26 182-210 261-286 (351)
352 3qyz_A Mitogen-activated prote 26.0 45 0.0016 26.4 3.1 25 183-210 289-313 (364)
353 3mtl_A Cell division protein k 25.8 27 0.00092 27.3 1.6 24 184-210 258-281 (324)
354 3mi9_A Cell division protein k 24.7 35 0.0012 26.8 2.1 22 189-210 290-311 (351)
355 1kob_A Twitchin; kinase, intra 24.2 33 0.0011 27.8 1.9 26 182-210 279-304 (387)
356 3i6u_A CDS1, serine/threonine- 24.0 62 0.0021 26.4 3.6 20 191-210 380-399 (419)
357 3pg1_A Mitogen-activated prote 24.0 37 0.0013 26.8 2.1 19 192-210 298-316 (362)
358 3uc3_A Serine/threonine-protei 23.9 54 0.0018 26.1 3.1 26 182-210 249-274 (361)
359 2rku_A Serine/threonine-protei 23.8 22 0.00074 27.2 0.7 26 182-210 240-265 (294)
360 2qr7_A Ribosomal protein S6 ki 23.7 42 0.0014 26.6 2.4 26 182-210 252-277 (342)
361 3zgw_A Maternal embryonic leuc 23.3 39 0.0013 27.0 2.1 18 193-210 243-260 (347)
362 4fih_A Serine/threonine-protei 22.7 47 0.0016 26.8 2.5 26 182-210 298-323 (346)
363 1nxk_A MAP kinase-activated pr 22.7 46 0.0016 27.0 2.5 26 182-210 296-321 (400)
364 3fe3_A MAP/microtubule affinit 22.3 49 0.0017 26.0 2.6 18 193-210 247-264 (328)
365 3kn6_A Ribosomal protein S6 ki 21.0 24 0.00082 27.7 0.4 26 182-210 245-270 (325)
366 3p23_A Serine/threonine-protei 20.5 52 0.0018 27.1 2.4 21 190-210 263-283 (432)
367 3q5i_A Protein kinase; CDPK, m 20.3 66 0.0023 26.9 3.1 26 182-210 276-301 (504)
No 1
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.87 E-value=1.2e-22 Score=166.37 Aligned_cols=128 Identities=31% Similarity=0.538 Sum_probs=114.5
Q ss_pred ChhhhhhhhcccCCCCCCCCCCcCCCCCCCCCCcCcc--cceeeeCCC---CCeEEEEecCCCCcc--ccCccccCCCCC
Q 035742 1 ADALLKWKASLQSHNRSLLPSWTNATTNVSSKICPCA--WFGISCSDA---GRVINISLRNTGLSG--TLSDFSFSSFPQ 73 (214)
Q Consensus 1 ~~~l~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~c~--w~gv~c~~~---~~L~~L~L~~n~l~g--~~p~~~~~~l~~ 73 (214)
++||++||+++.++ . .+++| ..+++ +|. |.||+|... ++|+.|+|++|.++| .+| ..|..+++
T Consensus 8 ~~aL~~~k~~~~~~-~-~l~~W-~~~~~------~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~-~~l~~l~~ 77 (313)
T 1ogq_A 8 KQALLQIKKDLGNP-T-TLSSW-LPTTD------CCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIP-SSLANLPY 77 (313)
T ss_dssp HHHHHHHHHHTTCC-G-GGTTC-CTTSC------TTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECC-GGGGGCTT
T ss_pred HHHHHHHHHhcCCc-c-cccCC-CCCCC------CCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccC-hhHhCCCC
Confidence 47999999999653 3 68999 45566 787 999999854 799999999999998 899 89999999
Q ss_pred CcEEeCcC-CcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhcccccceeecch
Q 035742 74 LVHLDLSL-NGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVLV 138 (214)
Q Consensus 74 L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~ 138 (214)
|++|++++ |.+.+.+|..++.+++|++|++++|.+++.+|..|.++++|++|++++|++++.+|.
T Consensus 78 L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 143 (313)
T 1ogq_A 78 LNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPP 143 (313)
T ss_dssp CSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCG
T ss_pred CCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCCh
Confidence 99999995 999999999999999999999999999999999999999999999999999987774
No 2
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.82 E-value=1.1e-20 Score=168.46 Aligned_cols=129 Identities=21% Similarity=0.234 Sum_probs=115.1
Q ss_pred ChhhhhhhhcccCCCCCCCC-------CCcCCCCCCCCCCcCccc---ceeeeCCCCCeEEEEecCCCCccccCccccCC
Q 035742 1 ADALLKWKASLQSHNRSLLP-------SWTNATTNVSSKICPCAW---FGISCSDAGRVINISLRNTGLSGTLSDFSFSS 70 (214)
Q Consensus 1 ~~~l~~~~~~~~~~~~~~~~-------~W~~~~~~~~~~~~~c~w---~gv~c~~~~~L~~L~L~~n~l~g~~p~~~~~~ 70 (214)
++||.++|.++.++.|.... +| ..+++ +|.| .||+|+..++|+.|+|++++++|.+| +.++.
T Consensus 32 ~~aL~~~~~~~~~~~w~~~~~~~~~~~~W-~~~~~------~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp-~~l~~ 103 (636)
T 4eco_A 32 YLALKEIWDALNGKNWSQQGFGTQPGANW-NFNKE------LDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVP-DAIGQ 103 (636)
T ss_dssp HHHHHHHHHHTTGGGCCCCC------CCC-CCSSC------GGGTTCCTTEEECTTCCEEEEECTTSCCEEEEC-GGGGG
T ss_pred HHHHHHHHHHcCCCCcccCCcCCccCCCC-CCCCC------cccccCCCCeEEcCCCCEEEEEecCcccCCcCC-hHHhc
Confidence 36999999999877666443 79 46666 9999 99999877899999999999999999 99999
Q ss_pred CCCCcEEeCcCCc-------------------------------------------------------------------
Q 035742 71 FPQLVHLDLSLNG------------------------------------------------------------------- 83 (214)
Q Consensus 71 l~~L~~L~l~~n~------------------------------------------------------------------- 83 (214)
+++|+.|++++|.
T Consensus 104 L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l 183 (636)
T 4eco_A 104 LTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITL 183 (636)
T ss_dssp CTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCC
T ss_pred CccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccch
Confidence 9999999999884
Q ss_pred -----------CcCCChhhhhCCcccceeeccccccccC-----------------CCcccc--ccccchhhhcccccce
Q 035742 84 -----------FLGTIPSQIGNLSKLSYISLQSNQLSGK-----------------IPLEVG--LLTHLKVLHFQFNQLK 133 (214)
Q Consensus 84 -----------l~~~~p~~~~~l~~L~~L~ls~N~l~g~-----------------~p~~~~--~l~~L~~L~l~~N~l~ 133 (214)
++| +|..++++++|++|++++|.++|. +|..++ ++++|++|++++|++.
T Consensus 184 ~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~ 262 (636)
T 4eco_A 184 KDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNL 262 (636)
T ss_dssp CTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTC
T ss_pred hhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCC
Confidence 445 888999999999999999999985 999999 9999999999999999
Q ss_pred eecch
Q 035742 134 LLVLV 138 (214)
Q Consensus 134 g~~p~ 138 (214)
|.+|.
T Consensus 263 ~~~p~ 267 (636)
T 4eco_A 263 TKLPT 267 (636)
T ss_dssp SSCCT
T ss_pred ccChH
Confidence 98885
No 3
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.81 E-value=3.5e-20 Score=168.38 Aligned_cols=128 Identities=29% Similarity=0.487 Sum_probs=109.6
Q ss_pred ChhhhhhhhcccCCCCCCCCCCcCCCCCCCCCCcCcccceeeeCCCCCeEEEEecCCCCccc---cCc------------
Q 035742 1 ADALLKWKASLQSHNRSLLPSWTNATTNVSSKICPCAWFGISCSDAGRVINISLRNTGLSGT---LSD------------ 65 (214)
Q Consensus 1 ~~~l~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~c~w~gv~c~~~~~L~~L~L~~n~l~g~---~p~------------ 65 (214)
|+||++||+++.++ . .+++| ..+++ +|.|.||+|+ .++|+.|+|+++.+.|. +|.
T Consensus 14 ~~all~~k~~~~~~-~-~l~~W-~~~~~------~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~ 83 (768)
T 3rgz_A 14 IHQLISFKDVLPDK-N-LLPDW-SSNKN------PCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLF 83 (768)
T ss_dssp HHHHHHHHTTCSCT-T-SSTTC-CTTSC------GGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEE
T ss_pred HHHHHHHHhhCCCc-c-cccCC-CCCCC------CcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHhccCcccccC
Confidence 57999999999854 4 89999 46666 9999999998 68999999999999886 441
Q ss_pred ----------cccCCCCCCcEEeCcCCcCcCCChh--hhhCCcccceeeccccccccCCCccc-cccccchhhhcccccc
Q 035742 66 ----------FSFSSFPQLVHLDLSLNGFLGTIPS--QIGNLSKLSYISLQSNQLSGKIPLEV-GLLTHLKVLHFQFNQL 132 (214)
Q Consensus 66 ----------~~~~~l~~L~~L~l~~n~l~~~~p~--~~~~l~~L~~L~ls~N~l~g~~p~~~-~~l~~L~~L~l~~N~l 132 (214)
..|..+++|++|++++|.++|.+|. .++++++|++|++++|.+.+.+|..+ .++++|++|++++|++
T Consensus 84 ~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 163 (768)
T 3rgz_A 84 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSI 163 (768)
T ss_dssp CTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCC
T ss_pred CcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCcc
Confidence 3677889999999999999988888 89999999999999999988888766 7888999999999998
Q ss_pred eeecch
Q 035742 133 KLLVLV 138 (214)
Q Consensus 133 ~g~~p~ 138 (214)
++.+|.
T Consensus 164 ~~~~~~ 169 (768)
T 3rgz_A 164 SGANVV 169 (768)
T ss_dssp EEETHH
T ss_pred CCcCCh
Confidence 887764
No 4
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.78 E-value=1.6e-19 Score=165.50 Aligned_cols=144 Identities=19% Similarity=0.241 Sum_probs=114.7
Q ss_pred ChhhhhhhhcccCCCCCCCCCCcCCCCCCCC-CCcCccc------------ceeeeCCCCCeEEEEecCCCCccccCccc
Q 035742 1 ADALLKWKASLQSHNRSLLPSWTNATTNVSS-KICPCAW------------FGISCSDAGRVINISLRNTGLSGTLSDFS 67 (214)
Q Consensus 1 ~~~l~~~~~~~~~~~~~~~~~W~~~~~~~~~-~~~~c~w------------~gv~c~~~~~L~~L~L~~n~l~g~~p~~~ 67 (214)
++||++||.++.++ +|. .+.+|+. ..|.|.| .||+|+..++|+.|+|++|++.|.+| +.
T Consensus 271 ~~ALl~~k~~l~~~------~W~-~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip-~~ 342 (876)
T 4ecn_A 271 YKALKAIWEALDGK------NWR-YYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVP-DA 342 (876)
T ss_dssp HHHHHHHHHHTTGG------GCC-CCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEEC-GG
T ss_pred HHHHHHHHHHcCCC------CCC-cCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCc-hH
Confidence 47999999999653 673 3321111 1123999 99999977899999999999999999 99
Q ss_pred cCCCCCCcEEeC-cCCcCcCC-----------------------------------------------------------
Q 035742 68 FSSFPQLVHLDL-SLNGFLGT----------------------------------------------------------- 87 (214)
Q Consensus 68 ~~~l~~L~~L~l-~~n~l~~~----------------------------------------------------------- 87 (214)
++++++|+.|+| ++|.++|.
T Consensus 343 l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~ 422 (876)
T 4ecn_A 343 IGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSR 422 (876)
T ss_dssp GGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCC
T ss_pred HhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccccc
Confidence 999999999999 77765444
Q ss_pred -----------------ChhhhhCCcccceeecccccccc-----------------CCCcccc--ccccchhhhccccc
Q 035742 88 -----------------IPSQIGNLSKLSYISLQSNQLSG-----------------KIPLEVG--LLTHLKVLHFQFNQ 131 (214)
Q Consensus 88 -----------------~p~~~~~l~~L~~L~ls~N~l~g-----------------~~p~~~~--~l~~L~~L~l~~N~ 131 (214)
+|..++++++|+.|++++|.|+| .+|..++ ++++|++|+|++|+
T Consensus 423 l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~ 502 (876)
T 4ecn_A 423 ISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCP 502 (876)
T ss_dssp CCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCT
T ss_pred cchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCC
Confidence 88899999999999999999998 3999988 99999999999999
Q ss_pred ceeecch-hhhhcCCCCchhhh
Q 035742 132 LKLLVLV-LEVIKGKHPRDFLC 152 (214)
Q Consensus 132 l~g~~p~-~~~l~g~~p~~~~~ 152 (214)
+.+.+|. +..++...-.++..
T Consensus 503 l~~~iP~~l~~L~~L~~L~Ls~ 524 (876)
T 4ecn_A 503 NMTQLPDFLYDLPELQSLNIAC 524 (876)
T ss_dssp TCCSCCGGGGGCSSCCEEECTT
T ss_pred CCccChHHHhCCCCCCEEECcC
Confidence 9998885 44444333333333
No 5
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.70 E-value=2e-18 Score=142.26 Aligned_cols=128 Identities=16% Similarity=0.295 Sum_probs=102.6
Q ss_pred ChhhhhhhhcccCCCCCCCCCCc---CCCCCCCCCCcCcccceeeeC---------CCCCeEEEEecCCCCccccCcccc
Q 035742 1 ADALLKWKASLQSHNRSLLPSWT---NATTNVSSKICPCAWFGISCS---------DAGRVINISLRNTGLSGTLSDFSF 68 (214)
Q Consensus 1 ~~~l~~~~~~~~~~~~~~~~~W~---~~~~~~~~~~~~c~w~gv~c~---------~~~~L~~L~L~~n~l~g~~p~~~~ 68 (214)
++||++||..+..++.+.+.+|. ....+ .|.|.|+.|. ...+++.|+|++|.++ .+| ..+
T Consensus 29 ~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~------~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp-~~l 100 (328)
T 4fcg_A 29 HDVLSQWQRHYNADRNRWHSAWRQANSNNPQ------IETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFP-DQA 100 (328)
T ss_dssp HHHHHHHHHHHHHCCTTHHHHHHHHTTTCTT------SCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCC-SCG
T ss_pred HHHHHHHHHhccCCchhhhhhhccccccccc------ccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcC-hhh
Confidence 46999999998766556678884 22344 8999999995 2367889999999888 788 778
Q ss_pred CCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhcccccceeecch
Q 035742 69 SSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVLV 138 (214)
Q Consensus 69 ~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~ 138 (214)
..+++|++|++++|.++ .+|..++.+++|++|++++|.++ .+|..++++++|++|++++|++.+.+|.
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~ 168 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPE 168 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCS
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccCh
Confidence 88888888888888888 78888888888888888888888 7788888888888888888777766653
No 6
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.68 E-value=1.3e-16 Score=122.74 Aligned_cols=108 Identities=24% Similarity=0.301 Sum_probs=87.1
Q ss_pred CCCCcCcccceeeeCC----------CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccc
Q 035742 30 SSKICPCAWFGISCSD----------AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLS 99 (214)
Q Consensus 30 ~~~~~~c~w~gv~c~~----------~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 99 (214)
|-..|.|.|.++.|.. ..+++.|++++|.+++..+ ..|..+++|++|++++|.+++..+..+..+++|+
T Consensus 1 Cp~~C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 79 (208)
T 2o6s_A 1 CPSRCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPN-GVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLT 79 (208)
T ss_dssp CCTTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCT-TTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CcCCCEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCCh-hhhcccccCcEEECCCCccCccChhhcCCCCCcC
Confidence 3457899999999974 2368999999999985444 6688999999999999999866555678899999
Q ss_pred eeeccccccccCCCccccccccchhhhcccccceeecch
Q 035742 100 YISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVLV 138 (214)
Q Consensus 100 ~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~ 138 (214)
+|++++|++++..+..|..+++|++|++++|++++..+.
T Consensus 80 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 118 (208)
T 2o6s_A 80 YLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDG 118 (208)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred EEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHh
Confidence 999999999855555678888888899988888876653
No 7
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.68 E-value=9.9e-17 Score=122.27 Aligned_cols=109 Identities=23% Similarity=0.319 Sum_probs=96.7
Q ss_pred CCCCcCcccceeeeCCC----------CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccc
Q 035742 30 SSKICPCAWFGISCSDA----------GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLS 99 (214)
Q Consensus 30 ~~~~~~c~w~gv~c~~~----------~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 99 (214)
|-..|.|.|..+.|+.. .+++.|++++|.+++..+...|..+++|++|++++|.+++..|..|..+++|+
T Consensus 2 CP~~C~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 81 (192)
T 1w8a_A 2 CPAMCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQ 81 (192)
T ss_dssp CCTTSEEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCC
T ss_pred cCCCCEECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCC
Confidence 55789999999999842 38999999999998554412489999999999999999988899999999999
Q ss_pred eeeccccccccCCCccccccccchhhhcccccceeecch
Q 035742 100 YISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVLV 138 (214)
Q Consensus 100 ~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~ 138 (214)
+|++++|+|++..|..|..+++|++|++++|++++.+|.
T Consensus 82 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 120 (192)
T 1w8a_A 82 ELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPG 120 (192)
T ss_dssp EEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTT
T ss_pred EEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHH
Confidence 999999999988888899999999999999999998774
No 8
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.66 E-value=2.1e-16 Score=118.27 Aligned_cols=109 Identities=20% Similarity=0.227 Sum_probs=94.4
Q ss_pred CCCCcCcccceeeeCC----------CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccc
Q 035742 30 SSKICPCAWFGISCSD----------AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLS 99 (214)
Q Consensus 30 ~~~~~~c~w~gv~c~~----------~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 99 (214)
|-..|.|.|..+.|+. ..+++.|+|++|.|++..| ..|..+++|++|++++|+|++..+..|..+++|+
T Consensus 3 CP~~C~C~~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~-~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~ 81 (170)
T 3g39_A 3 CPSQCSCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEP-GVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLT 81 (170)
T ss_dssp CC-CCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCT-TTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CcCcCCcCCCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccCh-hhhcCcccCCEEECCCCCcCccChhhccCCCCCC
Confidence 5567899999999974 2478999999999997667 8899999999999999999976666789999999
Q ss_pred eeeccccccccCCCccccccccchhhhcccccceeecchh
Q 035742 100 YISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVLVL 139 (214)
Q Consensus 100 ~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~ 139 (214)
+|++++|+|++..+..|..+++|++|+|++|.+++..+.+
T Consensus 82 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~l 121 (170)
T 3g39_A 82 QLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDI 121 (170)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGGG
T ss_pred EEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCchhH
Confidence 9999999999666667999999999999999998876643
No 9
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=2.3e-16 Score=118.39 Aligned_cols=108 Identities=26% Similarity=0.301 Sum_probs=92.9
Q ss_pred CCCCcCcccceeeeCC----------CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccc
Q 035742 30 SSKICPCAWFGISCSD----------AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLS 99 (214)
Q Consensus 30 ~~~~~~c~w~gv~c~~----------~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 99 (214)
|-..|.|.|.++.|.. ..+++.|++++|.+++..+ ..|..+++|++|++++|.+++..+..+..+++|+
T Consensus 1 Cp~~C~C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 79 (177)
T 2o6r_A 1 CPSRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPH-GVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLT 79 (177)
T ss_dssp CCTTCEEETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCT-TTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CcCCCEeCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCH-HHhcCcccccEEECCCCcceEeChhHccCCCccC
Confidence 4467899999999974 2479999999999995444 6789999999999999999966666689999999
Q ss_pred eeeccccccccCCCccccccccchhhhcccccceeecch
Q 035742 100 YISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVLV 138 (214)
Q Consensus 100 ~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~ 138 (214)
+|++++|++++..+..+..+++|++|++++|++++.++.
T Consensus 80 ~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 118 (177)
T 2o6r_A 80 ILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDG 118 (177)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred EEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHH
Confidence 999999999966666789999999999999999976553
No 10
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.64 E-value=6.3e-16 Score=120.97 Aligned_cols=119 Identities=21% Similarity=0.214 Sum_probs=96.5
Q ss_pred cCcccceeeeCC----------CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeec
Q 035742 34 CPCAWFGISCSD----------AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISL 103 (214)
Q Consensus 34 ~~c~w~gv~c~~----------~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 103 (214)
|.|.|.+|.|+. ..+|+.|+|++|.+++..| ..|..+++|+.|++++|.+....+..|..+++|+.|++
T Consensus 17 ~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 95 (229)
T 3e6j_A 17 CSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEP-GVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDL 95 (229)
T ss_dssp CEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCH-HHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEEC
Confidence 499999999984 2478999999999997767 88999999999999999998555566889999999999
Q ss_pred cccccccCCCccccccccchhhhcccccceeecchhhhhcCCCCchhhhh
Q 035742 104 QSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVLVLEVIKGKHPRDFLCS 153 (214)
Q Consensus 104 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~l~g~~p~~~~~~ 153 (214)
++|+|++..+..|..+++|++|++++|+++..+..+..+....-.++..|
T Consensus 96 s~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N 145 (229)
T 3e6j_A 96 GTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQN 145 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSS
T ss_pred CCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCC
Confidence 99999966666788999999999999999955444544444433344333
No 11
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=6.5e-16 Score=117.92 Aligned_cols=113 Identities=19% Similarity=0.284 Sum_probs=99.0
Q ss_pred CCCCcCcccceeeeCC----------CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccc
Q 035742 30 SSKICPCAWFGISCSD----------AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLS 99 (214)
Q Consensus 30 ~~~~~~c~w~gv~c~~----------~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 99 (214)
|-..|.|.|..+.|+. ..+++.|++++|.|+ .+| ..|..+++|+.|++++|.+++..+..|..+++|+
T Consensus 4 CP~~C~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip-~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~ 81 (193)
T 2wfh_A 4 CPTECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVP-KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLL 81 (193)
T ss_dssp CCTTCEEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCC-GGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CCCCCEeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhH-HHhhcccCCCEEECCCCcCCEeCHhHccCCCCCC
Confidence 5567899999999974 237999999999998 899 8999999999999999999988788899999999
Q ss_pred eeeccccccccCCCccccccccchhhhcccccceeecch-hhhhcC
Q 035742 100 YISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVLV-LEVIKG 144 (214)
Q Consensus 100 ~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~-~~~l~g 144 (214)
+|++++|+|++..|..|..+++|++|+|++|++++..+. +..+..
T Consensus 82 ~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 127 (193)
T 2wfh_A 82 TLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSA 127 (193)
T ss_dssp EEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTT
T ss_pred EEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCcc
Confidence 999999999977788899999999999999999976653 444433
No 12
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.62 E-value=3.8e-16 Score=141.87 Aligned_cols=104 Identities=29% Similarity=0.471 Sum_probs=94.6
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
..+++.|+|++|.++|.+| ..++.++.|+.|++++|.++|.+|..++++++|+.|++++|+++|.+|..++.+++|++|
T Consensus 631 l~~L~~LdLs~N~l~g~ip-~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L 709 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIP-KEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEI 709 (768)
T ss_dssp SBCCCEEECCSSCCBSCCC-GGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEE
T ss_pred cccccEEECcCCcccccCC-HHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEE
Confidence 3578999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccceeecchhhhhcCCCCchh
Q 035742 126 HFQFNQLKLLVLVLEVIKGKHPRDF 150 (214)
Q Consensus 126 ~l~~N~l~g~~p~~~~l~g~~p~~~ 150 (214)
++++|+++|.||....+....+..+
T Consensus 710 ~ls~N~l~g~iP~~~~~~~~~~~~~ 734 (768)
T 3rgz_A 710 DLSNNNLSGPIPEMGQFETFPPAKF 734 (768)
T ss_dssp ECCSSEEEEECCSSSSGGGSCGGGG
T ss_pred ECcCCcccccCCCchhhccCCHHHh
Confidence 9999999999997655544333333
No 13
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.62 E-value=1e-15 Score=119.07 Aligned_cols=109 Identities=20% Similarity=0.274 Sum_probs=93.2
Q ss_pred CCCCCcCcccceeeeCCC----------CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCccc
Q 035742 29 VSSKICPCAWFGISCSDA----------GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKL 98 (214)
Q Consensus 29 ~~~~~~~c~w~gv~c~~~----------~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 98 (214)
.|-..|.|.|..+.|... .+++.|++++|.|++..+ ..|..+++|+.|++++|.+++..|..|..+++|
T Consensus 4 ~CP~~C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~-~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L 82 (220)
T 2v9t_B 4 HCPAACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPP-GAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL 82 (220)
T ss_dssp CSCTTSEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECT-TSSTTCTTCCEEECCSSCCCEECTTTTTTCSSC
T ss_pred CCCCCCEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCH-hHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCC
Confidence 356679999999999742 378999999999995444 689999999999999999998888999999999
Q ss_pred ceeeccccccccCCCccccccccchhhhcccccceeecch
Q 035742 99 SYISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVLV 138 (214)
Q Consensus 99 ~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~ 138 (214)
++|++++|+|+...+..|..+++|++|+|++|++++..|.
T Consensus 83 ~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~ 122 (220)
T 2v9t_B 83 NSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVD 122 (220)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred CEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHH
Confidence 9999999999954445578899999999999999987664
No 14
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.60 E-value=1.8e-15 Score=117.74 Aligned_cols=109 Identities=21% Similarity=0.236 Sum_probs=83.6
Q ss_pred CCCCcCcccceeeeCCC----------CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccc
Q 035742 30 SSKICPCAWFGISCSDA----------GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLS 99 (214)
Q Consensus 30 ~~~~~~c~w~gv~c~~~----------~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 99 (214)
|-..|.|.|..+.|+.. ..++.|+|++|.|++..+...|..+++|+.|++++|.+++..+..|..+++|+
T Consensus 5 CP~~C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~ 84 (220)
T 2v70_A 5 CPEKCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVN 84 (220)
T ss_dssp CCTTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred CCCCCEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCC
Confidence 55678899999998741 25778888888888554424477888888888888888866666788888888
Q ss_pred eeeccccccccCCCccccccccchhhhcccccceeecch
Q 035742 100 YISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVLV 138 (214)
Q Consensus 100 ~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~ 138 (214)
+|++++|++++..+..|..+++|++|++++|++++..|.
T Consensus 85 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 123 (220)
T 2v70_A 85 EILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGND 123 (220)
T ss_dssp EEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTT
T ss_pred EEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHh
Confidence 888888888866666678888888888888888877553
No 15
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.57 E-value=6e-15 Score=110.74 Aligned_cols=110 Identities=15% Similarity=0.169 Sum_probs=89.4
Q ss_pred CCCCCcCcccceeeeCC----------CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCccc
Q 035742 29 VSSKICPCAWFGISCSD----------AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKL 98 (214)
Q Consensus 29 ~~~~~~~c~w~gv~c~~----------~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 98 (214)
.|-..|.|....+.|+. ..+|+.|+|++|.|++..| ..|..+++|+.|++++|+|++..+..|..+++|
T Consensus 5 ~CP~~C~C~~~~l~~~~n~l~~iP~~~~~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L 83 (174)
T 2r9u_A 5 GCPSQCSCDQTLVNCQNIRLASVPAGIPTDKQRLWLNNNQITKLEP-GVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQL 83 (174)
T ss_dssp SSCTTSEECSSEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CCCCCCEECCcEEEeCCCCCCccCCCcCCCCcEEEeCCCCccccCH-HHhcCCcCCCEEECCCCCCCccChhHhCCcchh
Confidence 35566788777777763 2478899999999997667 889999999999999999996555557899999
Q ss_pred ceeeccccccccCCCccccccccchhhhcccccceeecchh
Q 035742 99 SYISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVLVL 139 (214)
Q Consensus 99 ~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~ 139 (214)
+.|++++|+|++..+..|..+++|++|++++|.+....+.+
T Consensus 84 ~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~~ 124 (174)
T 2r9u_A 84 TQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCECRDI 124 (174)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTTBGGG
T ss_pred hEEECCCCccceeCHHHhccccCCCEEEeCCCCcccccccH
Confidence 99999999999555555899999999999999998765543
No 16
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.52 E-value=9e-15 Score=132.18 Aligned_cols=129 Identities=22% Similarity=0.222 Sum_probs=91.7
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLH 126 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 126 (214)
.+|+.|+|++|.+. .+| ..+..+++|+.|+|++|.|+ .+|..|+.+++|++|+|++|.|+ .+|..|+.+++|++|+
T Consensus 224 ~~L~~L~Ls~n~l~-~l~-~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 299 (727)
T 4b8c_D 224 QLWHALDLSNLQIF-NIS-ANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFY 299 (727)
T ss_dssp CCCCEEECTTSCCS-CCC-GGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEE
T ss_pred CCCcEEECCCCCCC-CCC-hhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEE
Confidence 45778888888888 777 67778888888888888888 78888888888888888888888 7888888888888888
Q ss_pred cccccceeecchhhhhcCCCCchhhhhhcccccchhh-----------hhhhhcCCCCCCCcch
Q 035742 127 FQFNQLKLLVLVLEVIKGKHPRDFLCSILSSSLTKDV-----------ALDEMLDPRLPTSSCS 179 (214)
Q Consensus 127 l~~N~l~g~~p~~~~l~g~~p~~~~~~~~~~~~~~~~-----------~~~~~l~~~lp~~~~~ 179 (214)
|++|.|+..+..+..+....-.++..|.+...++... ...|.+.+.+|.....
T Consensus 300 L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~ 363 (727)
T 4b8c_D 300 FFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRF 363 (727)
T ss_dssp CCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---
T ss_pred CCCCCCCccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccce
Confidence 8888887544445555555445555544443322211 2246667777776543
No 17
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.50 E-value=3.5e-14 Score=117.24 Aligned_cols=104 Identities=20% Similarity=0.232 Sum_probs=82.5
Q ss_pred CCCCc-CcccceeeeCCC------------CCeEEEEecC-CCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCC
Q 035742 30 SSKIC-PCAWFGISCSDA------------GRVINISLRN-TGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNL 95 (214)
Q Consensus 30 ~~~~~-~c~w~gv~c~~~------------~~L~~L~L~~-n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 95 (214)
|-..| .|.|..|.|... .+|+.|+|++ |.|++..+ ..|.++++|+.|+|++|+|++..|..|.++
T Consensus 1 cp~~c~~C~~~~v~~~~~n~l~~ip~l~~~~~L~~L~l~~~n~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 79 (347)
T 2ifg_A 1 CPDACCPHGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLEL-RDLRGLGELRNLTIVKSGLRFVAPDAFHFT 79 (347)
T ss_dssp CCSSSCCSSSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECG-GGSCSCCCCSEEECCSSCCCEECTTGGGSC
T ss_pred CCCcCccccCCEEEcCCCCCCCccCCCCCCCCeeEEEccCCCCCCCcCh-hHhccccCCCEEECCCCccceeCHHHhcCC
Confidence 44568 899999999854 2488899986 88885555 778889999999999999988778888889
Q ss_pred cccceeeccccccccCCCccccccccchhhhcccccceee
Q 035742 96 SKLSYISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLL 135 (214)
Q Consensus 96 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ 135 (214)
++|+.|+|++|+|++..+..|..+. |+.|+|.+|.|...
T Consensus 80 ~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 80 PRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp SCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred cCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 9999999999999854444555555 88899999988754
No 18
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.46 E-value=4.7e-14 Score=107.35 Aligned_cols=93 Identities=19% Similarity=0.242 Sum_probs=85.9
Q ss_pred CCCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchh
Q 035742 45 DAGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKV 124 (214)
Q Consensus 45 ~~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 124 (214)
...+|+.|+|++|.|++..| ..|..+++|+.|++++|.+++..+..|..+++|++|++++|++++..|..|..+++|++
T Consensus 52 ~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 130 (192)
T 1w8a_A 52 RLPHLVKLELKRNQLTGIEP-NAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTS 130 (192)
T ss_dssp GCTTCCEEECCSSCCCCBCT-TTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCE
T ss_pred cCCCCCEEECCCCCCCCcCH-hHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCE
Confidence 34689999999999997778 89999999999999999999888888999999999999999999999999999999999
Q ss_pred hhcccccceeecch
Q 035742 125 LHFQFNQLKLLVLV 138 (214)
Q Consensus 125 L~l~~N~l~g~~p~ 138 (214)
|++++|.+++..+.
T Consensus 131 L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 131 LNLASNPFNCNCHL 144 (192)
T ss_dssp EECTTCCBCCSGGG
T ss_pred EEeCCCCccCcCcc
Confidence 99999999987653
No 19
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.46 E-value=9.6e-14 Score=107.89 Aligned_cols=107 Identities=14% Similarity=0.140 Sum_probs=89.0
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
..+|+.|+|++|.|++..+ ..|..+++|+.|++++|.+++..+..|..+++|++|++++|++++..|..|..+++|++|
T Consensus 56 l~~L~~L~L~~N~i~~i~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 134 (220)
T 2v70_A 56 LPQLRKINFSNNKITDIEE-GAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLL 134 (220)
T ss_dssp CTTCCEEECCSSCCCEECT-TTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEE
T ss_pred CCCCCEEECCCCcCCEECH-HHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEE
Confidence 4589999999999996555 789999999999999999998888789999999999999999998889999999999999
Q ss_pred hcccccceeecch-hhhhcCCCCchhhhh
Q 035742 126 HFQFNQLKLLVLV-LEVIKGKHPRDFLCS 153 (214)
Q Consensus 126 ~l~~N~l~g~~p~-~~~l~g~~p~~~~~~ 153 (214)
+|++|++++..|. +..+....-.++..|
T Consensus 135 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 163 (220)
T 2v70_A 135 SLYDNQITTVAPGAFDTLHSLSTLNLLAN 163 (220)
T ss_dssp ECTTSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred ECCCCcCCEECHHHhcCCCCCCEEEecCc
Confidence 9999999988663 444443333333333
No 20
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.46 E-value=1.8e-13 Score=108.10 Aligned_cols=89 Identities=27% Similarity=0.290 Sum_probs=53.7
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhc
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHF 127 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 127 (214)
+++.|+|++|.+++..+ ..|..+++|++|++++|.+++..+..+..+++|++|++++|++++..+..|..+++|++|++
T Consensus 36 ~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSD-ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TCCEEECTTSCCCCCCT-TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEEccCCCcCccCH-hHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 46666666666664444 55666666666666666666555555666666666666666666444445555566666666
Q ss_pred ccccceeecc
Q 035742 128 QFNQLKLLVL 137 (214)
Q Consensus 128 ~~N~l~g~~p 137 (214)
++|++++..+
T Consensus 115 ~~N~l~~~~~ 124 (251)
T 3m19_A 115 GGNQLKSLPS 124 (251)
T ss_dssp CSSCCCCCCT
T ss_pred CCCcCCCcCh
Confidence 6666554443
No 21
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.46 E-value=6.1e-14 Score=113.75 Aligned_cols=106 Identities=25% Similarity=0.337 Sum_probs=85.9
Q ss_pred CCCCcCcccceeeeCCC----------CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcC--CChhhhhCCcc
Q 035742 30 SSKICPCAWFGISCSDA----------GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLG--TIPSQIGNLSK 97 (214)
Q Consensus 30 ~~~~~~c~w~gv~c~~~----------~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~ 97 (214)
|-..|.|.|.++.|... .+++.|++++|.++ .+|...|..+++|+.|++++|.++. ..+..+..+++
T Consensus 1 CP~~C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~ 79 (306)
T 2z66_A 1 CPSRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTS 79 (306)
T ss_dssp CCTTCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSC
T ss_pred CcCCCeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccc
Confidence 45678999999999852 37999999999999 6763558999999999999999873 33677778888
Q ss_pred cceeeccccccccCCCccccccccchhhhcccccceeecc
Q 035742 98 LSYISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVL 137 (214)
Q Consensus 98 L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p 137 (214)
|++|++++|.+. .+|..+..+++|++|++++|++++..+
T Consensus 80 L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~ 118 (306)
T 2z66_A 80 LKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSE 118 (306)
T ss_dssp CCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTT
T ss_pred cCEEECCCCccc-cChhhcCCCCCCCEEECCCCccccccc
Confidence 888888888887 567777788888888888888776544
No 22
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.45 E-value=9.9e-14 Score=115.42 Aligned_cols=109 Identities=23% Similarity=0.186 Sum_probs=90.5
Q ss_pred CCCCCCcCcccceeeeCC----------CCCeEEEEecCCCCccccCccccC-CCCCCcEEeCcCCcCcCCChhhhhCCc
Q 035742 28 NVSSKICPCAWFGISCSD----------AGRVINISLRNTGLSGTLSDFSFS-SFPQLVHLDLSLNGFLGTIPSQIGNLS 96 (214)
Q Consensus 28 ~~~~~~~~c~w~gv~c~~----------~~~L~~L~L~~n~l~g~~p~~~~~-~l~~L~~L~l~~n~l~~~~p~~~~~l~ 96 (214)
..|-..|.|.+..+.|.. ...++.|+|++|.|++..+ ..|. .+++|+.|++++|.|++..+..|..++
T Consensus 10 ~~Cp~~C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~-~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~ 88 (361)
T 2xot_A 10 VSCPANCLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRA-EWTPTRLTNLHSLLLSHNHLNFISSEAFVPVP 88 (361)
T ss_dssp TTCCTTCEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECT-TSSSSCCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred CCCCCCCEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccCh-hhhhhcccccCEEECCCCcCCccChhhccCCC
Confidence 346677999999999974 2357899999999995545 6676 899999999999999877777899999
Q ss_pred ccceeeccccccccCCCccccccccchhhhcccccceeecc
Q 035742 97 KLSYISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVL 137 (214)
Q Consensus 97 ~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p 137 (214)
+|++|+|++|+|++..+..|..+++|++|+|++|++++..|
T Consensus 89 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~ 129 (361)
T 2xot_A 89 NLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDR 129 (361)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECH
Confidence 99999999999986666678888999999999999887755
No 23
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.44 E-value=2.1e-13 Score=109.08 Aligned_cols=87 Identities=25% Similarity=0.288 Sum_probs=40.8
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhc
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHF 127 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 127 (214)
+|++|++++|.+++..+ ..|..+++|++|++++|.+++..+..+..+++|++|++++|.+++..+..++.+++|++|++
T Consensus 86 ~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 86 NLTYLILTGNQLQSLPN-GVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp TCCEEECTTSCCCCCCT-TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCccCccCh-hHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEEC
Confidence 45555555555543222 33445555555555555554333333444455555555555544333333444444444444
Q ss_pred ccccceee
Q 035742 128 QFNQLKLL 135 (214)
Q Consensus 128 ~~N~l~g~ 135 (214)
++|++++.
T Consensus 165 ~~n~l~~~ 172 (272)
T 3rfs_A 165 SYNQLQSL 172 (272)
T ss_dssp CSSCCCCC
T ss_pred CCCCcCcc
Confidence 44444443
No 24
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.43 E-value=1.1e-13 Score=121.83 Aligned_cols=90 Identities=28% Similarity=0.178 Sum_probs=79.1
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLH 126 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 126 (214)
.+++.|+|++|.|++..+ ..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+
T Consensus 52 ~~~~~LdLs~N~i~~l~~-~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGS-YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp TTCCEEECTTSCCCEECT-TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred cCCCEEEeeCCCCCCCCH-HHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 378999999999995444 7899999999999999999977777899999999999999999966667789999999999
Q ss_pred cccccceeecc
Q 035742 127 FQFNQLKLLVL 137 (214)
Q Consensus 127 l~~N~l~g~~p 137 (214)
+++|++++..+
T Consensus 131 Ls~N~l~~l~~ 141 (635)
T 4g8a_A 131 AVETNLASLEN 141 (635)
T ss_dssp CTTSCCCCSTT
T ss_pred CCCCcCCCCCh
Confidence 99999987665
No 25
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.43 E-value=6.9e-14 Score=121.88 Aligned_cols=99 Identities=19% Similarity=0.180 Sum_probs=81.3
Q ss_pred cCcccceeeeCC------------CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCccccee
Q 035742 34 CPCAWFGISCSD------------AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYI 101 (214)
Q Consensus 34 ~~c~w~gv~c~~------------~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 101 (214)
+.|.|.|+ |+. ..+|++|++++|.+++..| ..|..+++|++|++++|.+++..|..|..+++|++|
T Consensus 2 ~~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 79 (549)
T 2z81_A 2 LSCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGH-GDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHL 79 (549)
T ss_dssp CEECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECS-STTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccCCCCce-EECCCCccccccccCCCCccEEECcCCccCccCh-hhhhcCCcccEEECCCCCcCccChhhccccccCCEE
Confidence 46788887 652 2378999999999886666 788889999999999999887777888888999999
Q ss_pred eccccccccCCCccccccccchhhhccccccee
Q 035742 102 SLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKL 134 (214)
Q Consensus 102 ~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 134 (214)
++++|.+++..|..|+++++|++|++++|++++
T Consensus 80 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 112 (549)
T 2z81_A 80 DLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQT 112 (549)
T ss_dssp ECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSS
T ss_pred ECCCCccCccCHHHhccCCCCcEEECCCCcccc
Confidence 999999886666668888889999998888875
No 26
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.43 E-value=1.9e-13 Score=106.15 Aligned_cols=92 Identities=21% Similarity=0.143 Sum_probs=82.5
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
..+|+.|+|++|.+++..| ..|.++++|++|++++|.++...+..|..+++|+.|++++|++++..|..|..+++|++|
T Consensus 55 l~~L~~L~Ls~N~i~~~~~-~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 133 (220)
T 2v9t_B 55 YKKLRRIDLSNNQISELAP-DAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLL 133 (220)
T ss_dssp CTTCCEEECCSSCCCEECT-TTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCcCCCcCH-HHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEE
Confidence 4589999999999997667 899999999999999999995555557899999999999999998888899999999999
Q ss_pred hcccccceeecch
Q 035742 126 HFQFNQLKLLVLV 138 (214)
Q Consensus 126 ~l~~N~l~g~~p~ 138 (214)
+|++|++++..+.
T Consensus 134 ~L~~N~l~~~~~~ 146 (220)
T 2v9t_B 134 SLYDNKLQTIAKG 146 (220)
T ss_dssp ECCSSCCSCCCTT
T ss_pred ECCCCcCCEECHH
Confidence 9999999987764
No 27
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.43 E-value=7.5e-14 Score=113.99 Aligned_cols=92 Identities=20% Similarity=0.289 Sum_probs=80.4
Q ss_pred CCCeEEEEecC-CCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchh
Q 035742 46 AGRVINISLRN-TGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKV 124 (214)
Q Consensus 46 ~~~L~~L~L~~-n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 124 (214)
..+|+.|++++ |.+.+.+| ..|..+++|++|++++|.+++.+|..+..+++|++|++++|.+++.+|..+..+++|++
T Consensus 75 l~~L~~L~L~~~n~l~~~~p-~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 153 (313)
T 1ogq_A 75 LPYLNFLYIGGINNLVGPIP-PAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVG 153 (313)
T ss_dssp CTTCSEEEEEEETTEESCCC-GGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCE
T ss_pred CCCCCeeeCCCCCcccccCC-hhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCe
Confidence 35788999995 88888888 88899999999999999998888888999999999999999998888888888999999
Q ss_pred hhcccccceeecch
Q 035742 125 LHFQFNQLKLLVLV 138 (214)
Q Consensus 125 L~l~~N~l~g~~p~ 138 (214)
|++++|+++|.+|.
T Consensus 154 L~L~~N~l~~~~p~ 167 (313)
T 1ogq_A 154 ITFDGNRISGAIPD 167 (313)
T ss_dssp EECCSSCCEEECCG
T ss_pred EECcCCcccCcCCH
Confidence 99999998877764
No 28
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.43 E-value=1.1e-13 Score=117.79 Aligned_cols=108 Identities=21% Similarity=0.198 Sum_probs=89.6
Q ss_pred CCCCcCcccceeeeCCC---------CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCC-hhhhhCCcccc
Q 035742 30 SSKICPCAWFGISCSDA---------GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTI-PSQIGNLSKLS 99 (214)
Q Consensus 30 ~~~~~~c~w~gv~c~~~---------~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~ 99 (214)
|-..|.|....+.|... .+|++|+|++|.+++..| ..|.++++|++|++++|.+.+.+ +..|..+++|+
T Consensus 4 ~~~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~ 82 (455)
T 3v47_A 4 GTSECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNE-TSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLI 82 (455)
T ss_dssp ---CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECT-TTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCC
T ss_pred ccceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCCh-hHhccCccccEEECcCCcccceECcccccccccCC
Confidence 44556666666888742 479999999999997667 88999999999999999997666 45689999999
Q ss_pred eeeccccccccCCCccccccccchhhhcccccceeecch
Q 035742 100 YISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVLV 138 (214)
Q Consensus 100 ~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~ 138 (214)
+|++++|++++..|..|+++++|++|++++|++++.+|.
T Consensus 83 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 121 (455)
T 3v47_A 83 ILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLS 121 (455)
T ss_dssp EEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHH
T ss_pred EEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccC
Confidence 999999999988899999999999999999999875543
No 29
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.42 E-value=3.2e-13 Score=103.66 Aligned_cols=133 Identities=20% Similarity=0.112 Sum_probs=97.6
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
..+|+.|++++|.+++ ++...|..+++|++|++++|.+++..+..+..+++|++|++++|++++..+..|..+++|++|
T Consensus 51 l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 129 (208)
T 2o6s_A 51 LTSLTQLYLGGNKLQS-LPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDL 129 (208)
T ss_dssp CTTCSEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cccCcEEECCCCccCc-cChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEE
Confidence 4578999999999984 442567889999999999999986666667889999999999999986666668888999999
Q ss_pred hcccccceeecch-hhhhcCCCCchhhhhhcccccch---hhhhhhhcCCCCCCCcch
Q 035742 126 HFQFNQLKLLVLV-LEVIKGKHPRDFLCSILSSSLTK---DVALDEMLDPRLPTSSCS 179 (214)
Q Consensus 126 ~l~~N~l~g~~p~-~~~l~g~~p~~~~~~~~~~~~~~---~~~~~~~l~~~lp~~~~~ 179 (214)
++++|++++.++. +..+....-.++..|.+....+. .....+.+.|.+|.....
T Consensus 130 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l~~L~~~~n~~~g~ip~~~~~ 187 (208)
T 2o6s_A 130 RLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYLSEWINKHSGVVRNSAGS 187 (208)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTTTHHHHHHHHHCTTTBBCTTSS
T ss_pred ECCCCccceeCHHHhccCCCccEEEecCCCeecCCCCHHHHHHHHHhCCceeeccCcc
Confidence 9999998876664 45555544455555544433332 223357788888887664
No 30
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.41 E-value=2.9e-13 Score=108.10 Aligned_cols=89 Identities=24% Similarity=0.179 Sum_probs=60.6
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhc
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHF 127 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 127 (214)
+++.|++++|.+++..+ ..|..+++|++|++++|.++...+..|..+++|++|++++|.+++..+..|..+++|++|++
T Consensus 38 ~l~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPS-KAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TCSEEECCSSCCSCCCT-TSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCEEECcCCCCCeeCH-HHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 57778888888774333 56777888888888888777444444567777777777777777444455566666777777
Q ss_pred ccccceeecc
Q 035742 128 QFNQLKLLVL 137 (214)
Q Consensus 128 ~~N~l~g~~p 137 (214)
++|++++..+
T Consensus 117 ~~n~l~~~~~ 126 (270)
T 2o6q_A 117 DRNQLKSLPP 126 (270)
T ss_dssp CSSCCCCCCT
T ss_pred CCCccCeeCH
Confidence 6666665544
No 31
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.40 E-value=8.8e-13 Score=98.85 Aligned_cols=100 Identities=19% Similarity=0.156 Sum_probs=82.0
Q ss_pred EEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhccc
Q 035742 50 INISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHFQF 129 (214)
Q Consensus 50 ~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~ 129 (214)
+.+++++|.++ .+| ..+. +.|+.|++++|.+++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 15 ~~l~~~~n~l~-~iP-~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVP-AGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCC-SCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccC-CCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 68999999997 888 6554 8999999999999988888999999999999999999965555678999999999999
Q ss_pred ccceeecch-hhhhcCCCCchhhhh
Q 035742 130 NQLKLLVLV-LEVIKGKHPRDFLCS 153 (214)
Q Consensus 130 N~l~g~~p~-~~~l~g~~p~~~~~~ 153 (214)
|+|++.++. +..+....-.++..|
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N 115 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNN 115 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSS
T ss_pred CccceeCHHHhccccCCCEEEeCCC
Confidence 999987664 444444433444333
No 32
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.39 E-value=5.3e-13 Score=114.05 Aligned_cols=109 Identities=17% Similarity=0.251 Sum_probs=94.6
Q ss_pred CCCCCCcCcc--cceeeeCCC----------CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCC
Q 035742 28 NVSSKICPCA--WFGISCSDA----------GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNL 95 (214)
Q Consensus 28 ~~~~~~~~c~--w~gv~c~~~----------~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 95 (214)
..|-..|.|. |..+.|... .+++.|+|++|.+++..+ ..|.++++|+.|++++|.+++..|..|..+
T Consensus 44 ~~Cp~~C~C~~~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l 122 (452)
T 3zyi_A 44 QNCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQA-DTFRHLHHLEVLQLGRNSIRQIEVGAFNGL 122 (452)
T ss_dssp CCCCTTSEECSSSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECT-TTTTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred CCCCCCCEECCCCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECH-HHcCCCCCCCEEECCCCccCCcChhhccCc
Confidence 3466677885 578889742 379999999999997667 889999999999999999998888899999
Q ss_pred cccceeeccccccccCCCccccccccchhhhcccccceeecc
Q 035742 96 SKLSYISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVL 137 (214)
Q Consensus 96 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p 137 (214)
++|++|++++|++++..+..|..+++|++|++++|++++..+
T Consensus 123 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 164 (452)
T 3zyi_A 123 ASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPS 164 (452)
T ss_dssp TTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECT
T ss_pred ccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCH
Confidence 999999999999996666679999999999999999987655
No 33
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.39 E-value=6.6e-13 Score=113.95 Aligned_cols=108 Identities=23% Similarity=0.269 Sum_probs=91.8
Q ss_pred CCCCcCcc--cceeeeCC----------CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcc
Q 035742 30 SSKICPCA--WFGISCSD----------AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSK 97 (214)
Q Consensus 30 ~~~~~~c~--w~gv~c~~----------~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 97 (214)
|-..|.|. |..|.|.. ..+++.|+|++|.+++..+ ..|..+++|++|++++|.+++..|..|.++++
T Consensus 3 Cp~~C~C~~~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 81 (477)
T 2id5_A 3 CPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQ-DEFASFPHLEELELNENIVSAVEPGAFNNLFN 81 (477)
T ss_dssp CSTTCEEETTTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECT-TTTTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred ccCCCeECCCCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECH-hHccCCCCCCEEECCCCccCEeChhhhhCCcc
Confidence 55678884 67899974 2378999999999996666 88999999999999999999888889999999
Q ss_pred cceeeccccccccCCCccccccccchhhhcccccceeecch
Q 035742 98 LSYISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVLV 138 (214)
Q Consensus 98 L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~ 138 (214)
|++|++++|++++..+..|.++++|++|++++|++++.+|.
T Consensus 82 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 122 (477)
T 2id5_A 82 LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDY 122 (477)
T ss_dssp CCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTT
T ss_pred CCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChh
Confidence 99999999999955555688999999999999999887663
No 34
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.38 E-value=9.9e-13 Score=102.68 Aligned_cols=90 Identities=28% Similarity=0.296 Sum_probs=80.5
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
..+|+.|+|++|.|+ .+|...|..+++|+.|++++|.+++..+..+..+++|+.|++++|+|+ .+|..+..+++|++|
T Consensus 63 l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 140 (229)
T 3e6j_A 63 LINLKELYLGSNQLG-ALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHL 140 (229)
T ss_dssp CTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEE
T ss_pred ccCCcEEECCCCCCC-CcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEE
Confidence 458999999999998 555366899999999999999999766667899999999999999999 899999999999999
Q ss_pred hcccccceeecc
Q 035742 126 HFQFNQLKLLVL 137 (214)
Q Consensus 126 ~l~~N~l~g~~p 137 (214)
++++|++++..+
T Consensus 141 ~L~~N~l~~~~~ 152 (229)
T 3e6j_A 141 ALDQNQLKSIPH 152 (229)
T ss_dssp ECCSSCCCCCCT
T ss_pred ECCCCcCCccCH
Confidence 999999997665
No 35
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.38 E-value=7.9e-13 Score=98.67 Aligned_cols=101 Identities=21% Similarity=0.140 Sum_probs=83.6
Q ss_pred eEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhcc
Q 035742 49 VINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHFQ 128 (214)
Q Consensus 49 L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 128 (214)
.+.+++++|.++ .+| ..+ .+.|+.|++++|.|++..|..|..+++|++|++++|+|++..+..|..+++|++|+|+
T Consensus 11 ~~~l~~s~n~l~-~ip-~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVP-TGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp TTEEECTTSCCS-SCC-SCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccC-ccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 468999999999 688 555 3899999999999998888899999999999999999996666678999999999999
Q ss_pred cccceeecch-hhhhcCCCCchhhhh
Q 035742 129 FNQLKLLVLV-LEVIKGKHPRDFLCS 153 (214)
Q Consensus 129 ~N~l~g~~p~-~~~l~g~~p~~~~~~ 153 (214)
+|+|++..+. +..+....-.++..|
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N 112 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNN 112 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCC
Confidence 9999987764 555544444444444
No 36
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.37 E-value=7.6e-13 Score=105.80 Aligned_cols=133 Identities=18% Similarity=0.075 Sum_probs=103.5
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
..+|+.|++++|.+++..+ ..|..+++|++|++++|.+++..+..+..+++|+.|++++|++++..+..++.+++|++|
T Consensus 108 l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 186 (272)
T 3rfs_A 108 LTNLKELVLVENQLQSLPD-GVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDL 186 (272)
T ss_dssp CTTCCEEECTTSCCCCCCT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CcCCCEEECCCCcCCccCH-HHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEE
Confidence 4579999999999995555 668999999999999999997777678899999999999999997777778899999999
Q ss_pred hcccccceeecch-hhhhcCCCCchhhhhhcccccch---hhhhhhhcCCCCCCCcch
Q 035742 126 HFQFNQLKLLVLV-LEVIKGKHPRDFLCSILSSSLTK---DVALDEMLDPRLPTSSCS 179 (214)
Q Consensus 126 ~l~~N~l~g~~p~-~~~l~g~~p~~~~~~~~~~~~~~---~~~~~~~l~~~lp~~~~~ 179 (214)
++++|++++.+|. +..+....-.++..|.+....+. .....+.+.|.+|.+...
T Consensus 187 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l~~l~~~~n~~~g~ip~~~~~ 244 (272)
T 3rfs_A 187 RLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYLSEWINKHSGVVRNSAGS 244 (272)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGGGBBCTTSC
T ss_pred ECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCcHHHHHHHHHHhCCCcccCcccc
Confidence 9999999987775 45555555555555544443332 223357888899988765
No 37
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.37 E-value=2.5e-13 Score=112.36 Aligned_cols=103 Identities=24% Similarity=0.250 Sum_probs=82.4
Q ss_pred CcCcccceeeeCC------------CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccce
Q 035742 33 ICPCAWFGISCSD------------AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSY 100 (214)
Q Consensus 33 ~~~c~w~gv~c~~------------~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 100 (214)
.|.|.|.|+ |+. ..+|++|++++|.+++ ++...|.++++|+.|++++|.+++..|..+..+++|++
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITY-ISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEH 104 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcc-cCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCE
Confidence 358999887 542 2378999999999984 44257899999999999999998777778899999999
Q ss_pred eeccccccccCCCccccccccchhhhcccccceeecc
Q 035742 101 ISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVL 137 (214)
Q Consensus 101 L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p 137 (214)
|++++|++++..+..|+++++|++|++++|++++..+
T Consensus 105 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~ 141 (353)
T 2z80_A 105 LDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGE 141 (353)
T ss_dssp EECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCS
T ss_pred EECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCc
Confidence 9999999984433448888999999999998886544
No 38
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.37 E-value=1.1e-12 Score=103.69 Aligned_cols=91 Identities=23% Similarity=0.203 Sum_probs=69.5
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
..+|+.|+|++|.+++..+ ..|..+++|+.|++++|.+++..+..+..+++|++|++++|++++..+..|..+++|++|
T Consensus 58 l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 136 (251)
T 3m19_A 58 LTKLTWLNLDYNQLQTLSA-GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKEL 136 (251)
T ss_dssp CTTCCEEECTTSCCCCCCT-TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cccCCEEECCCCcCCccCH-hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEE
Confidence 3578888888888886555 667888888888888888886666667788888888888888885555556778888888
Q ss_pred hcccccceeecc
Q 035742 126 HFQFNQLKLLVL 137 (214)
Q Consensus 126 ~l~~N~l~g~~p 137 (214)
++++|++++.++
T Consensus 137 ~Ls~N~l~~~~~ 148 (251)
T 3m19_A 137 RLNTNQLQSIPA 148 (251)
T ss_dssp ECCSSCCCCCCT
T ss_pred ECcCCcCCccCH
Confidence 888888877665
No 39
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.37 E-value=2.7e-13 Score=106.23 Aligned_cols=108 Identities=26% Similarity=0.307 Sum_probs=86.9
Q ss_pred CCCCcCccc-ceee--eCC-------CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCc-CcCCChhhhhCCccc
Q 035742 30 SSKICPCAW-FGIS--CSD-------AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNG-FLGTIPSQIGNLSKL 98 (214)
Q Consensus 30 ~~~~~~c~w-~gv~--c~~-------~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l~~L 98 (214)
|-..|.|.+ .++. |.. ..+++.|++++|.+++..+ ..|..+++|+.|++++|. ++...+..|..+++|
T Consensus 4 cp~~C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~-~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L 82 (239)
T 2xwt_C 4 SSPPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPS-HAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKV 82 (239)
T ss_dssp CSSSCSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECT-TTTTTCTTCCEEEEECCSSCCEECTTTEESCTTC
T ss_pred CCCCCeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECH-HHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCC
Confidence 456678865 5544 853 3479999999999994444 689999999999999997 875555678999999
Q ss_pred ceeeccc-cccccCCCccccccccchhhhcccccceeecchh
Q 035742 99 SYISLQS-NQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVLVL 139 (214)
Q Consensus 99 ~~L~ls~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~ 139 (214)
++|++++ |++++..+..|..+++|++|++++|++++ +|.+
T Consensus 83 ~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~~ 123 (239)
T 2xwt_C 83 THIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPDL 123 (239)
T ss_dssp CEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCCC
T ss_pred cEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-cccc
Confidence 9999998 99996666788999999999999999887 4443
No 40
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.37 E-value=1e-12 Score=98.34 Aligned_cols=93 Identities=18% Similarity=0.167 Sum_probs=80.8
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
..+|+.|++++|.+++..+ ..|..+++|+.|++++|.+++..+..+..+++|++|++++|++++..+..+..+++|++|
T Consensus 51 l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 129 (177)
T 2o6r_A 51 LTQLTKLSLSQNQIQSLPD-GVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKI 129 (177)
T ss_dssp CTTCSEEECCSSCCCCCCT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred cccccEEECCCCcceEeCh-hHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEE
Confidence 4589999999999994444 668999999999999999997777678999999999999999995555557889999999
Q ss_pred hcccccceeecchh
Q 035742 126 HFQFNQLKLLVLVL 139 (214)
Q Consensus 126 ~l~~N~l~g~~p~~ 139 (214)
++++|.+++..|.+
T Consensus 130 ~l~~N~~~~~~~~l 143 (177)
T 2o6r_A 130 WLHTNPWDCSCPRI 143 (177)
T ss_dssp ECCSSCBCCCHHHH
T ss_pred EecCCCeeccCccH
Confidence 99999999987754
No 41
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.36 E-value=4.9e-13 Score=97.23 Aligned_cols=85 Identities=21% Similarity=0.231 Sum_probs=43.0
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccC-CCccccccccchhhh
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGK-IPLEVGLLTHLKVLH 126 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~-~p~~~~~l~~L~~L~ 126 (214)
+|+.|++++|.+++. ..+..+++|++|++++|.+++.+|..+..+++|++|++++|.+++. .+..+..+++|++|+
T Consensus 43 ~L~~L~l~~n~l~~~---~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~ 119 (149)
T 2je0_A 43 ELEFLSTINVGLTSI---ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLD 119 (149)
T ss_dssp TCCEEECTTSCCCCC---TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEE
T ss_pred CCcEEECcCCCCCCc---hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEe
Confidence 455555555555432 2445555555555555555544554454555555555555555531 224455555555555
Q ss_pred cccccceee
Q 035742 127 FQFNQLKLL 135 (214)
Q Consensus 127 l~~N~l~g~ 135 (214)
+++|.+++.
T Consensus 120 l~~N~l~~~ 128 (149)
T 2je0_A 120 LFNCEVTNL 128 (149)
T ss_dssp CTTCGGGGS
T ss_pred CcCCcccch
Confidence 555555443
No 42
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.35 E-value=1.5e-12 Score=104.44 Aligned_cols=89 Identities=24% Similarity=0.166 Sum_probs=58.3
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccc-cccCCCccccccccchhhh
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQ-LSGKIPLEVGLLTHLKVLH 126 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~-l~g~~p~~~~~l~~L~~L~ 126 (214)
+++.|++++|.+++..+ ..|..+++|++|++++|.+++..|..+..+++|++|++++|. +....|..+..+++|++|+
T Consensus 33 ~l~~L~l~~n~i~~~~~-~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPA-ASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TCSEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CceEEEeeCCcCCccCH-HHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 56777777777764433 556677777777777777765556666667777777777765 5544456666666666666
Q ss_pred cccccceeecc
Q 035742 127 FQFNQLKLLVL 137 (214)
Q Consensus 127 l~~N~l~g~~p 137 (214)
+++|++++..|
T Consensus 112 l~~n~l~~~~~ 122 (285)
T 1ozn_A 112 LDRCGLQELGP 122 (285)
T ss_dssp CTTSCCCCCCT
T ss_pred CCCCcCCEECH
Confidence 66666665544
No 43
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.35 E-value=1.2e-12 Score=107.35 Aligned_cols=105 Identities=22% Similarity=0.288 Sum_probs=88.2
Q ss_pred CCCCCcCcccceeeeCC----------CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCccc
Q 035742 29 VSSKICPCAWFGISCSD----------AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKL 98 (214)
Q Consensus 29 ~~~~~~~c~w~gv~c~~----------~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 98 (214)
.|...|.|.|..+.|.. ..+++.|++++|.+++..| ..|..+++|++|++++|.+++..|..+..+++|
T Consensus 26 ~cp~~c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 104 (332)
T 2ft3_A 26 MCPFGCHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRK-DDFKGLQHLYALVLVNNKISKIHEKAFSPLRKL 104 (332)
T ss_dssp CCCSSCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECT-TTTTTCTTCCEEECCSSCCCEECGGGSTTCTTC
T ss_pred CCCCCCcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCH-hHhhCCCCCcEEECCCCccCccCHhHhhCcCCC
Confidence 35566789999999974 2379999999999996556 789999999999999999998889999999999
Q ss_pred ceeeccccccccCCCccccccccchhhhcccccceeecc
Q 035742 99 SYISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVL 137 (214)
Q Consensus 99 ~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p 137 (214)
++|++++|.++ .+|..+. ++|++|++++|++++..+
T Consensus 105 ~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~ 140 (332)
T 2ft3_A 105 QKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPK 140 (332)
T ss_dssp CEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCS
T ss_pred CEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCH
Confidence 99999999998 7776554 678888888888776554
No 44
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.34 E-value=2.1e-12 Score=110.03 Aligned_cols=109 Identities=19% Similarity=0.251 Sum_probs=93.6
Q ss_pred CCCCCCcCcc--cceeeeCC----------CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCC
Q 035742 28 NVSSKICPCA--WFGISCSD----------AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNL 95 (214)
Q Consensus 28 ~~~~~~~~c~--w~gv~c~~----------~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 95 (214)
..|-..|.|. |..|.|.. ..+++.|+|++|.+++..+ ..|.++++|+.|++++|.+.+..+..|..+
T Consensus 33 ~~Cp~~C~C~~~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l 111 (440)
T 3zyj_A 33 QTCPSVCSCSNQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKV-NSFKHLRHLEILQLSRNHIRTIEIGAFNGL 111 (440)
T ss_dssp CCCCSSSEECTTSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECT-TTTSSCSSCCEEECCSSCCCEECGGGGTTC
T ss_pred ccCCCCCEeCCCCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCH-HHhhCCCCCCEEECCCCcCCccChhhccCC
Confidence 3466677885 67899974 2478999999999996666 889999999999999999998778889999
Q ss_pred cccceeeccccccccCCCccccccccchhhhcccccceeecc
Q 035742 96 SKLSYISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVL 137 (214)
Q Consensus 96 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p 137 (214)
++|++|++++|+++...+..|..+++|++|++++|++++..+
T Consensus 112 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~ 153 (440)
T 3zyj_A 112 ANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPS 153 (440)
T ss_dssp SSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECT
T ss_pred ccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCH
Confidence 999999999999996556679999999999999999987665
No 45
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.34 E-value=9.2e-13 Score=116.13 Aligned_cols=105 Identities=17% Similarity=0.141 Sum_probs=85.9
Q ss_pred CCCCcCcc--cceeeeCC----------CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcc
Q 035742 30 SSKICPCA--WFGISCSD----------AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSK 97 (214)
Q Consensus 30 ~~~~~~c~--w~gv~c~~----------~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 97 (214)
|...|.|. +..+.|.. ..+++.|++++|.+++..| ..|.++++|++|++++|.+.+..|..|.++++
T Consensus 4 ~~~~C~~~~~~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 82 (606)
T 3t6q_A 4 SDQKCIEKEVNKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQN-TTFSRLINLTFLDLTRCQIYWIHEDTFQSQHR 82 (606)
T ss_dssp --CCCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECT-TTSTTCTTCSEEECTTCCCCEECTTTTTTCTT
T ss_pred ccCceecccCCceEECCCCCcccCcCCCCCcCcEEEccCCccCcCCh-hHhccCccceEEECCCCccceeChhhccCccc
Confidence 33445664 45577763 2478999999999996666 88999999999999999998888888999999
Q ss_pred cceeeccccccccCCCccccccccchhhhcccccceee
Q 035742 98 LSYISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLL 135 (214)
Q Consensus 98 L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~ 135 (214)
|++|++++|++++..|..|+++++|++|++++|++++.
T Consensus 83 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l 120 (606)
T 3t6q_A 83 LDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSI 120 (606)
T ss_dssp CCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCG
T ss_pred cCeeeCCCCcccccChhhhcccccccEeeccccCcccC
Confidence 99999999999878888888889999999998888875
No 46
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.33 E-value=2.1e-12 Score=98.35 Aligned_cols=90 Identities=28% Similarity=0.227 Sum_probs=80.5
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
..+|+.|+|++|.|++..+ ..|.++++|+.|++++|.+++..|..|..+++|+.|++++|.|+...+..|..+++|+.|
T Consensus 53 l~~L~~L~Ls~N~i~~i~~-~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 131 (193)
T 2wfh_A 53 YKHLTLIDLSNNRISTLSN-QSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHL 131 (193)
T ss_dssp CTTCCEEECCSSCCCCCCT-TTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEE
T ss_pred ccCCCEEECCCCcCCEeCH-hHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEE
Confidence 4589999999999996555 789999999999999999998888889999999999999999995555578999999999
Q ss_pred hcccccceeec
Q 035742 126 HFQFNQLKLLV 136 (214)
Q Consensus 126 ~l~~N~l~g~~ 136 (214)
++++|.+...-
T Consensus 132 ~L~~N~~~C~c 142 (193)
T 2wfh_A 132 AIGANPLYCDC 142 (193)
T ss_dssp ECCSSCEECSG
T ss_pred EeCCCCeecCC
Confidence 99999998643
No 47
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.33 E-value=1.3e-12 Score=107.32 Aligned_cols=90 Identities=20% Similarity=0.194 Sum_probs=78.6
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
..+|+.|++++|.++ .+| ..+..+++|+.|++++|.++ .+|..+..+++|++|++++|.+.+.+|..++.+++|++|
T Consensus 182 l~~L~~L~L~~n~l~-~lp-~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L 258 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLP-ASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRL 258 (328)
T ss_dssp STTCCEEEEEEECCC-CCC-GGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEE
T ss_pred CCCCCEEECcCCCcC-cch-HhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEE
Confidence 457899999999998 888 78899999999999999998 467788899999999999999888899989999999999
Q ss_pred hcccccceeecch
Q 035742 126 HFQFNQLKLLVLV 138 (214)
Q Consensus 126 ~l~~N~l~g~~p~ 138 (214)
++++|++.+.+|.
T Consensus 259 ~L~~n~~~~~~p~ 271 (328)
T 4fcg_A 259 ILKDCSNLLTLPL 271 (328)
T ss_dssp ECTTCTTCCBCCT
T ss_pred ECCCCCchhhcch
Confidence 9999988888774
No 48
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.32 E-value=6.6e-13 Score=98.48 Aligned_cols=84 Identities=26% Similarity=0.321 Sum_probs=39.0
Q ss_pred CeEEEEecCCCCc-cccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhh
Q 035742 48 RVINISLRNTGLS-GTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLH 126 (214)
Q Consensus 48 ~L~~L~L~~n~l~-g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 126 (214)
+|+.|++++|.++ +.+| ..+..+++|+.|++++|.+++. ..+..+++|++|++++|++++.+|..+..+++|++|+
T Consensus 25 ~L~~L~l~~n~l~~~~i~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIE-GLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp SCSEEECCSCBCBTTBCS-SCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred cCCEEECCCCCCChhhHH-HHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 3444445444444 3444 3344444444444444444432 3444444444444444444433444444444444444
Q ss_pred ccccccee
Q 035742 127 FQFNQLKL 134 (214)
Q Consensus 127 l~~N~l~g 134 (214)
+++|++++
T Consensus 102 Ls~N~l~~ 109 (168)
T 2ell_A 102 LSGNKLKD 109 (168)
T ss_dssp CBSSSCCS
T ss_pred ccCCccCc
Confidence 44444443
No 49
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.32 E-value=5.7e-13 Score=120.41 Aligned_cols=101 Identities=24% Similarity=0.352 Sum_probs=91.0
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
..+|+.|+|++|.|+ .+| ..|..+++|+.|+|++|.|+ .+|..|+.+++|++|+|++|.|+ .+|..|+.+++|++|
T Consensus 246 l~~L~~L~Ls~N~l~-~lp-~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L 321 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELP-AEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFL 321 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCC-GGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCE
T ss_pred CCCCCEEEeeCCcCc-ccC-hhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEE
Confidence 357999999999999 899 89999999999999999999 88999999999999999999998 889999999999999
Q ss_pred hcccccceeecchh---------------hhhcCCCCchh
Q 035742 126 HFQFNQLKLLVLVL---------------EVIKGKHPRDF 150 (214)
Q Consensus 126 ~l~~N~l~g~~p~~---------------~~l~g~~p~~~ 150 (214)
+|++|.|++.+|.. +.++|.+|..+
T Consensus 322 ~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l 361 (727)
T 4b8c_D 322 GVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHER 361 (727)
T ss_dssp ECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-
T ss_pred eCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccc
Confidence 99999999988751 45667777654
No 50
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.32 E-value=1.5e-12 Score=114.67 Aligned_cols=81 Identities=26% Similarity=0.351 Sum_probs=41.0
Q ss_pred eEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhcc
Q 035742 49 VINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHFQ 128 (214)
Q Consensus 49 L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 128 (214)
|+.|+|++|.|+ .+| . |..+++|+.|++++|.++ .+|..++.+++|+.|++++|.|++ +| .++.+++|++|+|+
T Consensus 443 L~~L~Ls~n~l~-~lp-~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 443 VRVLHLAHKDLT-VLC-H-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp CSEEECTTSCCS-SCC-C-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred ceEEEecCCCCC-CCc-C-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 445555555554 244 2 555555555555555554 445555555555555555555552 44 45555555555555
Q ss_pred cccceee
Q 035742 129 FNQLKLL 135 (214)
Q Consensus 129 ~N~l~g~ 135 (214)
+|+|++.
T Consensus 517 ~N~l~~~ 523 (567)
T 1dce_A 517 NNRLQQS 523 (567)
T ss_dssp SSCCCSS
T ss_pred CCCCCCC
Confidence 5555544
No 51
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.32 E-value=3.6e-12 Score=104.36 Aligned_cols=106 Identities=24% Similarity=0.311 Sum_probs=89.3
Q ss_pred CCCCCcCcccceeeeCC----------CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCccc
Q 035742 29 VSSKICPCAWFGISCSD----------AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKL 98 (214)
Q Consensus 29 ~~~~~~~c~w~gv~c~~----------~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 98 (214)
.|-..|.|.|..+.|.. ..+++.|++++|.+++..+ ..|..+++|++|++++|.+++..|..+..+++|
T Consensus 24 ~cp~~c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 102 (330)
T 1xku_A 24 VCPFRCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKD-GDFKNLKNLHTLILINNKISKISPGAFAPLVKL 102 (330)
T ss_dssp CCCTTCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCT-TTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTC
T ss_pred CCCCCCcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeCh-hhhccCCCCCEEECCCCcCCeeCHHHhcCCCCC
Confidence 35567889999999973 2478999999999995544 689999999999999999998889999999999
Q ss_pred ceeeccccccccCCCccccccccchhhhcccccceeecch
Q 035742 99 SYISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVLV 138 (214)
Q Consensus 99 ~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~ 138 (214)
++|++++|.++ .+|..+. ++|++|++++|++++..+.
T Consensus 103 ~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~ 139 (330)
T 1xku_A 103 ERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKS 139 (330)
T ss_dssp CEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHH
T ss_pred CEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHh
Confidence 99999999998 6776554 6788888888888776553
No 52
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.31 E-value=3.2e-12 Score=112.64 Aligned_cols=90 Identities=29% Similarity=0.209 Sum_probs=74.7
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLH 126 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 126 (214)
.+++.|++++|.+++..+ ..|.++++|++|++++|.+++..|..|.++++|++|++++|.+++..|..|+++++|++|+
T Consensus 32 ~~l~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKS-YSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp TTCCEEECTTSCCCEECT-TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCcCEEECCCCCcCEeCh-hhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 478888999998886555 6888888889999988888877777888888888888888888877788888888888888
Q ss_pred cccccceeecc
Q 035742 127 FQFNQLKLLVL 137 (214)
Q Consensus 127 l~~N~l~g~~p 137 (214)
+++|++++..+
T Consensus 111 L~~n~l~~~~~ 121 (606)
T 3vq2_A 111 AVETKLASLES 121 (606)
T ss_dssp CTTSCCCCSSS
T ss_pred ccCCccccccc
Confidence 88888876553
No 53
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.29 E-value=3.4e-12 Score=110.29 Aligned_cols=116 Identities=19% Similarity=0.137 Sum_probs=85.0
Q ss_pred CcccceeeeCCCCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhh-CCcccceeeccccccccCCC
Q 035742 35 PCAWFGISCSDAGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIG-NLSKLSYISLQSNQLSGKIP 113 (214)
Q Consensus 35 ~c~w~gv~c~~~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~ls~N~l~g~~p 113 (214)
.|.+.++.|....+|+.|+|++|.+++..| ..|..+++|+.|++++|.+++..|..+. .+++|+.|++++|.|++. |
T Consensus 108 ~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~ 185 (487)
T 3oja_A 108 NNNISRVSCSRGQGKKNIYLANNKITMLRD-LDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K 185 (487)
T ss_dssp SSCCCCEEECCCSSCEEEECCSSCCCSGGG-BCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E
T ss_pred CCcCCCCCccccCCCCEEECCCCCCCCCCc-hhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c
Confidence 345666667666778899999999887667 7788888999999999999887787776 688888888888888754 3
Q ss_pred ccccccccchhhhcccccceeecchhhhhcCCCCchhhhh
Q 035742 114 LEVGLLTHLKVLHFQFNQLKLLVLVLEVIKGKHPRDFLCS 153 (214)
Q Consensus 114 ~~~~~l~~L~~L~l~~N~l~g~~p~~~~l~g~~p~~~~~~ 153 (214)
. +..+++|++|+|++|.+++.+|.+..+....-.++..|
T Consensus 186 ~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N 224 (487)
T 3oja_A 186 G-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNN 224 (487)
T ss_dssp C-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTS
T ss_pred c-cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCC
Confidence 2 34577788888888888877776555444444444433
No 54
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.28 E-value=4.6e-12 Score=101.20 Aligned_cols=86 Identities=19% Similarity=0.197 Sum_probs=41.1
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhc
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHF 127 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 127 (214)
+|+.|++++|.+++..+ ..|..+++|++|++++|.+++..+..+..+++|++|++++|.+.+..+..++.+++|++|++
T Consensus 53 ~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 53 ELQVLDLSRCEIQTIED-GAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TCSEEECTTCCCCEECT-TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred CCcEEECCCCcCCccCH-HHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 44444444444442222 34444445555555555444444444444555555555555554333334555555555555
Q ss_pred cccccee
Q 035742 128 QFNQLKL 134 (214)
Q Consensus 128 ~~N~l~g 134 (214)
++|++++
T Consensus 132 ~~n~l~~ 138 (276)
T 2z62_A 132 AHNLIQS 138 (276)
T ss_dssp CSSCCCC
T ss_pred cCCccce
Confidence 5555544
No 55
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.27 E-value=4.5e-12 Score=107.91 Aligned_cols=89 Identities=24% Similarity=0.237 Sum_probs=57.2
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhc
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHF 127 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 127 (214)
+|+.|++++|.+++..| ..|..+++|+.|++++|.+.+..|..+..+++|++|++++|.+++..|..|..+++|++|++
T Consensus 276 ~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 276 GVKTCDLSKSKIFALLK-SVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp CCCEEECCSSCCCEECT-TTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred CceEEEecCccccccch-hhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 56666666666665555 56666666666666666666555656666666666666666666555566666666666666
Q ss_pred ccccceeecc
Q 035742 128 QFNQLKLLVL 137 (214)
Q Consensus 128 ~~N~l~g~~p 137 (214)
++|++++.+|
T Consensus 355 s~N~l~~~~~ 364 (455)
T 3v47_A 355 SYNHIRALGD 364 (455)
T ss_dssp CSSCCCEECT
T ss_pred CCCcccccCh
Confidence 6666666544
No 56
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.27 E-value=5.1e-12 Score=91.77 Aligned_cols=105 Identities=22% Similarity=0.256 Sum_probs=88.6
Q ss_pred CCeEEEEecCCCCc-cccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 47 GRVINISLRNTGLS-GTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 47 ~~L~~L~L~~n~l~-g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
.+++.|++++|.++ +.+| ..+..+++|+.|++++|.+++. ..+..+++|++|++++|.+++.+|..+..+++|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLE-GLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCC-SCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHH-HHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 47999999999998 7899 8889999999999999999865 788999999999999999997788888889999999
Q ss_pred hcccccceeec--chhhhhcCCCCchhhhhh
Q 035742 126 HFQFNQLKLLV--LVLEVIKGKHPRDFLCSI 154 (214)
Q Consensus 126 ~l~~N~l~g~~--p~~~~l~g~~p~~~~~~~ 154 (214)
++++|++++.. ..+..+....-.++..|.
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~ 124 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCE 124 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCG
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCc
Confidence 99999999843 445555544444444443
No 57
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.27 E-value=5.7e-12 Score=110.88 Aligned_cols=91 Identities=22% Similarity=0.173 Sum_probs=83.8
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCC-Cccccccccchh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKI-PLEVGLLTHLKV 124 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~-p~~~~~l~~L~~ 124 (214)
..+|+.|+|++|.|+ .+| ..|..+++|+.|++++|.+++ +| .++.+++|+.|++++|+|++.. |..++.+++|+.
T Consensus 462 l~~L~~L~Ls~N~l~-~lp-~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~ 537 (567)
T 1dce_A 462 LLLVTHLDLSHNRLR-ALP-PALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVL 537 (567)
T ss_dssp GTTCCEEECCSSCCC-CCC-GGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCE
T ss_pred cccCcEeecCccccc-ccc-hhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCE
Confidence 357999999999999 899 899999999999999999995 77 8999999999999999999776 999999999999
Q ss_pred hhcccccceeecchhh
Q 035742 125 LHFQFNQLKLLVLVLE 140 (214)
Q Consensus 125 L~l~~N~l~g~~p~~~ 140 (214)
|+|++|++++.+|...
T Consensus 538 L~L~~N~l~~~~~~~~ 553 (567)
T 1dce_A 538 LNLQGNSLCQEEGIQE 553 (567)
T ss_dssp EECTTSGGGGSSSCTT
T ss_pred EEecCCcCCCCccHHH
Confidence 9999999998877543
No 58
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.27 E-value=2.5e-12 Score=106.41 Aligned_cols=108 Identities=24% Similarity=0.271 Sum_probs=89.1
Q ss_pred CCCCC-cCcccceeeeCC----------CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChh-hhhCCc
Q 035742 29 VSSKI-CPCAWFGISCSD----------AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPS-QIGNLS 96 (214)
Q Consensus 29 ~~~~~-~~c~w~gv~c~~----------~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~ 96 (214)
+|-.. |.|.+..|.|+. ..++++|+|++|.|+ .+|...|.++++|++|+|++|.+.+.+|. .|.+++
T Consensus 1 gCp~~~C~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~ 79 (350)
T 4ay9_X 1 GCHHRICHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLP 79 (350)
T ss_dssp -CCCSSSEEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCT
T ss_pred CCCCCccEeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcch
Confidence 35444 899999999974 247899999999999 67746799999999999999999777765 478888
Q ss_pred ccce-eeccccccccCCCccccccccchhhhcccccceeecc
Q 035742 97 KLSY-ISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVL 137 (214)
Q Consensus 97 ~L~~-L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p 137 (214)
+++. +.+..|+++...|..|..+++|++|++++|++++..+
T Consensus 80 ~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~ 121 (350)
T 4ay9_X 80 KLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPD 121 (350)
T ss_dssp TCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCC
T ss_pred hhhhhhcccCCcccccCchhhhhccccccccccccccccCCc
Confidence 8775 5667899997778889999999999999999886654
No 59
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.27 E-value=7.5e-12 Score=95.30 Aligned_cols=84 Identities=23% Similarity=0.318 Sum_probs=42.1
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccc-cccCCCccccccccchhhh
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQ-LSGKIPLEVGLLTHLKVLH 126 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~-l~g~~p~~~~~l~~L~~L~ 126 (214)
+|+.|++++|.+++..+ ..+..+++|++|++++|.+++..|..+..+++|+.|++++|. ++ .+| .+..+++|++|+
T Consensus 89 ~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~ 165 (197)
T 4ezg_A 89 NLERLRIMGKDVTSDKI-PNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLN 165 (197)
T ss_dssp TCCEEEEECTTCBGGGS-CCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEE
T ss_pred CCCEEEeECCccCcccC-hhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEE
Confidence 45555555555554344 445555555555555555554444455555555555555554 32 333 344555555555
Q ss_pred ccccccee
Q 035742 127 FQFNQLKL 134 (214)
Q Consensus 127 l~~N~l~g 134 (214)
+++|++++
T Consensus 166 l~~n~i~~ 173 (197)
T 4ezg_A 166 IQFDGVHD 173 (197)
T ss_dssp CTTBCCCC
T ss_pred CCCCCCcC
Confidence 55555543
No 60
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.26 E-value=4.2e-12 Score=105.57 Aligned_cols=93 Identities=20% Similarity=0.142 Sum_probs=79.0
Q ss_pred CCCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchh
Q 035742 45 DAGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKV 124 (214)
Q Consensus 45 ~~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 124 (214)
...+|+.|+|++|.|++..+ ..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|+|++..|..|..+++|+.
T Consensus 62 ~l~~L~~L~L~~N~i~~i~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 140 (361)
T 2xot_A 62 RLTNLHSLLLSHNHLNFISS-EAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQK 140 (361)
T ss_dssp CCTTCCEEECCSSCCCEECT-TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred cccccCEEECCCCcCCccCh-hhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCE
Confidence 34579999999999985555 77999999999999999998666667889999999999999999777888999999999
Q ss_pred hhcccccceeecch
Q 035742 125 LHFQFNQLKLLVLV 138 (214)
Q Consensus 125 L~l~~N~l~g~~p~ 138 (214)
|+|++|++++..+.
T Consensus 141 L~L~~N~l~~l~~~ 154 (361)
T 2xot_A 141 LYLSQNQISRFPVE 154 (361)
T ss_dssp EECCSSCCCSCCGG
T ss_pred EECCCCcCCeeCHH
Confidence 99999999875543
No 61
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.26 E-value=6.2e-12 Score=112.32 Aligned_cols=103 Identities=23% Similarity=0.324 Sum_probs=68.6
Q ss_pred cCcccceeeeCC----------CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeec
Q 035742 34 CPCAWFGISCSD----------AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISL 103 (214)
Q Consensus 34 ~~c~w~gv~c~~----------~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 103 (214)
|.|.+..+.|+. ..+++.|++++|.+++..+ ..|.++++|++|++++|.+++..|..++++++|++|++
T Consensus 2 C~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 80 (680)
T 1ziw_A 2 CTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPA-ANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNL 80 (680)
T ss_dssp --CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCG-GGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEEC
T ss_pred ceeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCH-HHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEEC
Confidence 455555556652 2367778888887774433 56777777777777777777766777777777777777
Q ss_pred cccccccCCCccccccccchhhhcccccceeecc
Q 035742 104 QSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVL 137 (214)
Q Consensus 104 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p 137 (214)
++|.+++..+..|+++++|++|++++|++++..|
T Consensus 81 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~ 114 (680)
T 1ziw_A 81 QHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKN 114 (680)
T ss_dssp CSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCS
T ss_pred CCCccCccChhhhccCCCCCEEECCCCccCccCh
Confidence 7777773333357777777777777777766554
No 62
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.26 E-value=7.2e-12 Score=92.80 Aligned_cols=87 Identities=26% Similarity=0.304 Sum_probs=77.9
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCC--ccccccccchh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIP--LEVGLLTHLKV 124 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p--~~~~~l~~L~~ 124 (214)
.+|+.|++++|.+++. ..+..+++|+.|++++|.+++.+|..+..+++|++|++++|.+++ +| ..+..+++|++
T Consensus 49 ~~L~~L~l~~n~l~~~---~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~l~~l~~L~~ 124 (168)
T 2ell_A 49 VNLEFLSLINVGLISV---SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKD-ISTLEPLKKLECLKS 124 (168)
T ss_dssp GGCCEEEEESSCCCCC---SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCS-SGGGGGGSSCSCCCE
T ss_pred CCCCEEeCcCCCCCCh---hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCc-chhHHHHhcCCCCCE
Confidence 5799999999999854 478999999999999999998788888889999999999999984 44 78899999999
Q ss_pred hhcccccceeecc
Q 035742 125 LHFQFNQLKLLVL 137 (214)
Q Consensus 125 L~l~~N~l~g~~p 137 (214)
|++++|.+++..+
T Consensus 125 L~l~~N~l~~~~~ 137 (168)
T 2ell_A 125 LDLFNCEVTNLND 137 (168)
T ss_dssp EECCSSGGGTSTT
T ss_pred EEeeCCcCcchHH
Confidence 9999999987665
No 63
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.24 E-value=1.1e-11 Score=100.05 Aligned_cols=89 Identities=22% Similarity=0.239 Sum_probs=58.2
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLH 126 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 126 (214)
.+|+.|++++|.++ .+| ..+..+++|+.|++++|++++..+..|..+++|+.|++++|++++..+..|..+++|+.|+
T Consensus 77 ~~L~~L~Ls~N~l~-~l~-~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 154 (290)
T 1p9a_G 77 PVLGTLDLSHNQLQ-SLP-LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLS 154 (290)
T ss_dssp TTCCEEECCSSCCS-SCC-CCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CcCCEEECCCCcCC-cCc-hhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEE
Confidence 35666666666666 566 5666677777777777777655555666677777777777777644445566666777777
Q ss_pred cccccceeecc
Q 035742 127 FQFNQLKLLVL 137 (214)
Q Consensus 127 l~~N~l~g~~p 137 (214)
+++|++++.++
T Consensus 155 L~~N~l~~l~~ 165 (290)
T 1p9a_G 155 LANNNLTELPA 165 (290)
T ss_dssp CTTSCCSCCCT
T ss_pred CCCCcCCccCH
Confidence 77777665444
No 64
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.24 E-value=4.9e-12 Score=103.05 Aligned_cols=89 Identities=17% Similarity=0.140 Sum_probs=77.5
Q ss_pred CCCeEEEEecCCCCccccCcccc--CCCCCCcEEeCcCCcCcCCChhhhhCC-----cccceeeccccccccCCCccccc
Q 035742 46 AGRVINISLRNTGLSGTLSDFSF--SSFPQLVHLDLSLNGFLGTIPSQIGNL-----SKLSYISLQSNQLSGKIPLEVGL 118 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~--~~l~~L~~L~l~~n~l~~~~p~~~~~l-----~~L~~L~ls~N~l~g~~p~~~~~ 118 (214)
..+|++|++++|.+++.+| ..+ ..+++|++|++++|.+++. |..+..+ ++|++|++++|++++..|..|++
T Consensus 94 l~~L~~L~L~~n~l~~~~~-~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAP-PPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCC-CCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred cCCccEEEccCCcccchhH-HHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 4578999999999998888 665 8899999999999999876 8778777 89999999999999777788999
Q ss_pred cccchhhhcccccceeec
Q 035742 119 LTHLKVLHFQFNQLKLLV 136 (214)
Q Consensus 119 l~~L~~L~l~~N~l~g~~ 136 (214)
+++|++|++++|++.+.+
T Consensus 172 l~~L~~L~Ls~N~l~~~~ 189 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGER 189 (312)
T ss_dssp CSSCCEEECCSCTTCHHH
T ss_pred CCCCCEEECCCCCcCcch
Confidence 999999999999987753
No 65
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.23 E-value=1.3e-11 Score=108.68 Aligned_cols=89 Identities=18% Similarity=0.183 Sum_probs=78.1
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
..+|+.|+|++|.|++..+ ..|.++++|++|+|++|++++..+..|.++++|++|++++|++++..+..|+++++|++|
T Consensus 75 l~~L~~L~Ls~N~i~~i~~-~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L 153 (635)
T 4g8a_A 75 FPELQVLDLSRCEIQTIED-GAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKEL 153 (635)
T ss_dssp CTTCCEEECTTCCCCEECT-TTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEE
T ss_pred CCCCCEEECCCCcCCCcCh-hHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCee
Confidence 3489999999999995444 789999999999999999996666779999999999999999996666779999999999
Q ss_pred hcccccceee
Q 035742 126 HFQFNQLKLL 135 (214)
Q Consensus 126 ~l~~N~l~g~ 135 (214)
++++|.+++.
T Consensus 154 ~Ls~N~l~~~ 163 (635)
T 4g8a_A 154 NVAHNLIQSF 163 (635)
T ss_dssp ECCSSCCCCC
T ss_pred ccccCccccC
Confidence 9999999763
No 66
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.23 E-value=5.3e-12 Score=115.79 Aligned_cols=96 Identities=22% Similarity=0.102 Sum_probs=52.5
Q ss_pred cceeeeCCCCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCC-hhhhhCCcccceeeccccccccCCCccc
Q 035742 38 WFGISCSDAGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTI-PSQIGNLSKLSYISLQSNQLSGKIPLEV 116 (214)
Q Consensus 38 w~gv~c~~~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~L~ls~N~l~g~~p~~~ 116 (214)
|+.|.+ -..+++.|+|++|.+++..| ..|.++++|++|++++|.+.+.+ |..|.++++|++|++++|.+++..|..|
T Consensus 16 L~~vP~-lp~~l~~LdLs~N~i~~i~~-~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 16 LTQVPQ-VLNTTERLLLSFNYIRTVTA-SSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp SSCCCS-SCTTCCEEEEESCCCCEECS-SSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCC-CCCCcCEEECCCCcCCccCh-hHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 444444 33556666666666664444 55555555555555555443343 4445555555555555555555555555
Q ss_pred cccccchhhhcccccceee
Q 035742 117 GLLTHLKVLHFQFNQLKLL 135 (214)
Q Consensus 117 ~~l~~L~~L~l~~N~l~g~ 135 (214)
+++++|++|+|++|.+++.
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~ 112 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDA 112 (844)
T ss_dssp CSCSSCCCEECTTCCCSSC
T ss_pred cCCcccCEeeCcCCCCCcc
Confidence 5555555555555555543
No 67
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.22 E-value=2.4e-12 Score=114.63 Aligned_cols=86 Identities=15% Similarity=0.315 Sum_probs=45.5
Q ss_pred CCeEEEEecCCCCccc-----------------cCccccC--CCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccc
Q 035742 47 GRVINISLRNTGLSGT-----------------LSDFSFS--SFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQ 107 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~-----------------~p~~~~~--~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~ 107 (214)
.+|++|+|++|.++|. +| ..+. ++++|++|++++|.+.+.+|..++++++|++|++++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip-~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKT-EDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTT-SCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCc-hhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 3555555555555543 55 5555 55555555555555555555555555555555555555
Q ss_pred -ccc-CCCcccccc------ccchhhhcccccce
Q 035742 108 -LSG-KIPLEVGLL------THLKVLHFQFNQLK 133 (214)
Q Consensus 108 -l~g-~~p~~~~~l------~~L~~L~l~~N~l~ 133 (214)
++| .+|..++.+ ++|++|++++|+++
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 554 444444433 44444444444444
No 68
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.22 E-value=2.1e-11 Score=97.18 Aligned_cols=92 Identities=26% Similarity=0.230 Sum_probs=72.1
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
..+|+.|++++|.+++..+ ..|..+++|+.|++++|.+++..+..+..+++|++|++++|.+++..+..|..+++|+.|
T Consensus 84 l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 162 (270)
T 2o6q_A 84 LKNLETLWVTDNKLQALPI-GVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKEL 162 (270)
T ss_dssp CTTCCEEECCSSCCCCCCT-TTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCcCCcCCH-hHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCccccee
Confidence 3578888888888884434 667888888888888888887767778888888888888888885555557888888888
Q ss_pred hcccccceeecch
Q 035742 126 HFQFNQLKLLVLV 138 (214)
Q Consensus 126 ~l~~N~l~g~~p~ 138 (214)
++++|++++..+.
T Consensus 163 ~L~~n~l~~~~~~ 175 (270)
T 2o6q_A 163 RLYNNQLKRVPEG 175 (270)
T ss_dssp ECCSSCCSCCCTT
T ss_pred EecCCcCcEeChh
Confidence 8888888876553
No 69
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.22 E-value=2.8e-11 Score=97.07 Aligned_cols=89 Identities=21% Similarity=0.229 Sum_probs=45.0
Q ss_pred CeEEEEecCCC-CccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhh
Q 035742 48 RVINISLRNTG-LSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLH 126 (214)
Q Consensus 48 ~L~~L~L~~n~-l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 126 (214)
+|+.|++++|. ++...| ..|..+++|+.|++++|.+++..|..+..+++|++|++++|.+++..+..|+.+++|++|+
T Consensus 81 ~L~~L~l~~n~~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 159 (285)
T 1ozn_A 81 LLEQLDLSDNAQLRSVDP-ATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLF 159 (285)
T ss_dssp TCCEEECCSCTTCCCCCT-TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEeCCCCCCccccCH-HHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEE
Confidence 45555555554 432223 4455555555555555555544444455555555555555555533333455555555555
Q ss_pred cccccceeecc
Q 035742 127 FQFNQLKLLVL 137 (214)
Q Consensus 127 l~~N~l~g~~p 137 (214)
+++|++++..+
T Consensus 160 l~~n~l~~~~~ 170 (285)
T 1ozn_A 160 LHGNRISSVPE 170 (285)
T ss_dssp CCSSCCCEECT
T ss_pred CCCCcccccCH
Confidence 55555554433
No 70
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.21 E-value=2e-11 Score=98.61 Aligned_cols=92 Identities=20% Similarity=0.105 Sum_probs=78.8
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
..+|+.|++++|.+++..+ ..|..+++|+.|++++|++++..+..|..+++|+.|++++|++++..+..|..+++|++|
T Consensus 99 l~~L~~L~l~~N~l~~l~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L 177 (290)
T 1p9a_G 99 LPALTVLDVSFNRLTSLPL-GALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTL 177 (290)
T ss_dssp CTTCCEEECCSSCCCCCCS-STTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCcCcccCH-HHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEE
Confidence 4579999999999995555 779999999999999999997766678899999999999999995545567889999999
Q ss_pred hcccccceeecch
Q 035742 126 HFQFNQLKLLVLV 138 (214)
Q Consensus 126 ~l~~N~l~g~~p~ 138 (214)
++++|+++..++.
T Consensus 178 ~L~~N~l~~ip~~ 190 (290)
T 1p9a_G 178 LLQENSLYTIPKG 190 (290)
T ss_dssp ECCSSCCCCCCTT
T ss_pred ECCCCcCCccChh
Confidence 9999999865444
No 71
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.21 E-value=9.7e-12 Score=100.69 Aligned_cols=85 Identities=22% Similarity=0.337 Sum_probs=34.1
Q ss_pred eEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcC-CChhhhhCCcccceeeccccccccCCCccccccccchhhhc
Q 035742 49 VINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLG-TIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHF 127 (214)
Q Consensus 49 L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 127 (214)
|+.|++++|.+++..+ ..|..+++|+.|++++|.+.+ .+|..+..+++|+.|++++|.+++..|..+..+++|++|++
T Consensus 128 L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 206 (306)
T 2z66_A 128 LIYLDISHTHTRVAFN-GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 206 (306)
T ss_dssp CCEEECTTSCCEECST-TTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCEEECCCCcCCccch-hhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEEC
Confidence 3334444443333333 333344444444444444432 23333444444444444444444333334444444444444
Q ss_pred cccccee
Q 035742 128 QFNQLKL 134 (214)
Q Consensus 128 ~~N~l~g 134 (214)
++|++++
T Consensus 207 ~~N~l~~ 213 (306)
T 2z66_A 207 SHNNFFS 213 (306)
T ss_dssp TTSCCSB
T ss_pred CCCccCc
Confidence 4444433
No 72
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.21 E-value=1.2e-11 Score=101.83 Aligned_cols=85 Identities=16% Similarity=0.199 Sum_probs=77.7
Q ss_pred EEEecCC-CCccccCccccCCCCCCcEEeCcC-CcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhcc
Q 035742 51 NISLRNT-GLSGTLSDFSFSSFPQLVHLDLSL-NGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHFQ 128 (214)
Q Consensus 51 ~L~L~~n-~l~g~~p~~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 128 (214)
.++.+++ +|+ .+| . +..+++|+.|+|++ |.|++..+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 12 ~v~~~~~n~l~-~ip-~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 12 GLRCTRDGALD-SLH-H-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp CEECCSSCCCT-TTT-T-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred EEEcCCCCCCC-ccC-C-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 5688988 898 799 7 99999999999996 99997777889999999999999999998888899999999999999
Q ss_pred cccceeecch
Q 035742 129 FNQLKLLVLV 138 (214)
Q Consensus 129 ~N~l~g~~p~ 138 (214)
+|+|++.++.
T Consensus 89 ~N~l~~~~~~ 98 (347)
T 2ifg_A 89 FNALESLSWK 98 (347)
T ss_dssp SSCCSCCCST
T ss_pred CCccceeCHH
Confidence 9999987654
No 73
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.20 E-value=8.6e-12 Score=94.95 Aligned_cols=93 Identities=11% Similarity=0.224 Sum_probs=56.2
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhc
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHF 127 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 127 (214)
+|+.|++++|.++ . + +.+..+++|++|++++|.+++..+..+..+++|++|++++|.+++..|..++.+++|++|++
T Consensus 67 ~L~~L~l~~n~~~-~-~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L 143 (197)
T 4ezg_A 67 NIKDLTINNIHAT-N-Y-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143 (197)
T ss_dssp TCSEEEEESCCCS-C-C-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEEC
T ss_pred CCCEEEccCCCCC-c-c-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEc
Confidence 5666666666544 2 2 35666666666666666666555666666666666666666666555666666666666666
Q ss_pred ccccceeecchhhhhc
Q 035742 128 QFNQLKLLVLVLEVIK 143 (214)
Q Consensus 128 ~~N~l~g~~p~~~~l~ 143 (214)
++|.+.+.+|.+..+.
T Consensus 144 ~~n~~i~~~~~l~~l~ 159 (197)
T 4ezg_A 144 SYNGAITDIMPLKTLP 159 (197)
T ss_dssp CSCTBCCCCGGGGGCS
T ss_pred cCCCCccccHhhcCCC
Confidence 6666333344444333
No 74
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.20 E-value=9.4e-12 Score=109.95 Aligned_cols=89 Identities=18% Similarity=0.170 Sum_probs=51.0
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhc
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHF 127 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 127 (214)
+|+.|+|++|.+++..| ..|..+++|+.|++++|.+++..|..|+.+++|++|++++|.+++..+..|+++++|++|++
T Consensus 76 ~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDT-YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCSEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCcEEECCCCCCCCCCh-HHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 45555666666554433 45666666666666666666555555566666666666666666333333456666666666
Q ss_pred ccccceeecc
Q 035742 128 QFNQLKLLVL 137 (214)
Q Consensus 128 ~~N~l~g~~p 137 (214)
++|.+++.+|
T Consensus 155 s~N~l~~~~~ 164 (597)
T 3oja_B 155 SNNNLERIED 164 (597)
T ss_dssp CSSCCCBCCT
T ss_pred eCCcCCCCCh
Confidence 6666665554
No 75
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.19 E-value=3.3e-11 Score=96.21 Aligned_cols=91 Identities=18% Similarity=0.201 Sum_probs=65.7
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccC-CCccccccccchh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGK-IPLEVGLLTHLKV 124 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~-~p~~~~~l~~L~~ 124 (214)
..+|+.|++++|.+++..+ ..|.++++|++|++++|.+.+..+..+..+++|++|++++|.+++. +|..+..+++|++
T Consensus 75 l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~ 153 (276)
T 2z62_A 75 LSHLSTLILTGNPIQSLAL-GAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEH 153 (276)
T ss_dssp CTTCCEEECTTCCCCEECT-TTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCE
T ss_pred CcCCCEEECCCCccCccCh-hhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCE
Confidence 3467777777777775555 6677777777777777777755555677777777777777777642 5777777777777
Q ss_pred hhcccccceeecc
Q 035742 125 LHFQFNQLKLLVL 137 (214)
Q Consensus 125 L~l~~N~l~g~~p 137 (214)
|++++|++++..+
T Consensus 154 L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 154 LDLSSNKIQSIYC 166 (276)
T ss_dssp EECCSSCCCEECG
T ss_pred EECCCCCCCcCCH
Confidence 7777777776654
No 76
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.17 E-value=3.2e-11 Score=106.25 Aligned_cols=87 Identities=17% Similarity=0.216 Sum_probs=58.5
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLH 126 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 126 (214)
.+|+.|++++|.+++..| ..|.++++|++|++++|.+++..|..|+++++|++|++++|.+++..+..++++++|++|+
T Consensus 56 ~~L~~L~Ls~n~l~~i~~-~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 134 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIED-KAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLN 134 (606)
T ss_dssp TTCCEEECTTCCCCEECT-TTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEE
T ss_pred ccCcEEeCCCCcccccCH-HHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEe
Confidence 467777777777765445 5667777777777777777666666677777777777777776655545666666666666
Q ss_pred ccccccee
Q 035742 127 FQFNQLKL 134 (214)
Q Consensus 127 l~~N~l~g 134 (214)
+++|.+++
T Consensus 135 L~~n~l~~ 142 (606)
T 3vq2_A 135 VAHNFIHS 142 (606)
T ss_dssp CCSSCCCC
T ss_pred CCCCcccc
Confidence 66666654
No 77
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.17 E-value=3.3e-11 Score=106.43 Aligned_cols=91 Identities=16% Similarity=0.098 Sum_probs=78.3
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLH 126 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 126 (214)
.+++.+++++|.+. .+|...|..+++|+.|++++|.+++..|..|..+++|++|++++|.+++..|..|+++++|++|+
T Consensus 51 ~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 51 NNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp CCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 46788999999988 56635678899999999999999977777899999999999999999977777889999999999
Q ss_pred cccccceeecch
Q 035742 127 FQFNQLKLLVLV 138 (214)
Q Consensus 127 l~~N~l~g~~p~ 138 (214)
|++|.+++.++.
T Consensus 130 L~~n~l~~l~~~ 141 (597)
T 3oja_B 130 LERNDLSSLPRG 141 (597)
T ss_dssp CCSSCCCCCCTT
T ss_pred eeCCCCCCCCHH
Confidence 999999876654
No 78
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.16 E-value=1.8e-11 Score=102.43 Aligned_cols=86 Identities=16% Similarity=0.115 Sum_probs=46.0
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhc
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHF 127 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 127 (214)
+++.|++++|.++ .+|...|..+++|++|++++|.+.+..+..+..+++|++|++++|.+++..|..|+++++|++|++
T Consensus 46 ~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 46 NQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 4555556555555 344233455555555555555555444445555555555555555555444444555555555555
Q ss_pred cccccee
Q 035742 128 QFNQLKL 134 (214)
Q Consensus 128 ~~N~l~g 134 (214)
++|+++.
T Consensus 125 ~~n~l~~ 131 (390)
T 3o6n_A 125 ERNDLSS 131 (390)
T ss_dssp CSSCCCC
T ss_pred CCCccCc
Confidence 5555553
No 79
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.16 E-value=2.5e-11 Score=90.70 Aligned_cols=83 Identities=18% Similarity=0.135 Sum_probs=53.4
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCc--cccccccchhh
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPL--EVGLLTHLKVL 125 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~--~~~~l~~L~~L 125 (214)
+|+.|++++|.+++ + ..|..+++|+.|++++|.+++..+..+..+++|++|++++|.++ .+|. .+..+++|+.|
T Consensus 43 ~L~~L~Ls~N~l~~-~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 43 QFDAIDFSDNEIRK-L--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp CCSEEECCSSCCCE-E--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred CCCEEECCCCCCCc-c--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEE
Confidence 56777777777663 2 35666777777777777776433333466777777777777775 5554 56666677777
Q ss_pred hccccccee
Q 035742 126 HFQFNQLKL 134 (214)
Q Consensus 126 ~l~~N~l~g 134 (214)
++++|.++.
T Consensus 119 ~l~~N~i~~ 127 (176)
T 1a9n_A 119 CILRNPVTN 127 (176)
T ss_dssp ECCSSGGGG
T ss_pred EecCCCCCC
Confidence 777776654
No 80
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.15 E-value=9.7e-12 Score=114.20 Aligned_cols=91 Identities=14% Similarity=0.236 Sum_probs=69.0
Q ss_pred CCCeEEEEecCCCCcc-----------------ccCccccC--CCCCCcEEeCcCCcCcCCChhhhhCCcccceeecccc
Q 035742 46 AGRVINISLRNTGLSG-----------------TLSDFSFS--SFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSN 106 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g-----------------~~p~~~~~--~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N 106 (214)
..+|+.|+|++|.++| .+| ..++ ++++|+.|++++|.+.+.+|..++++++|+.|++++|
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP-~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N 525 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYEN-EELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACN 525 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTT-SCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTC
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCC-hhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCC
Confidence 4578888888888886 377 6766 8888888888888888888888888888888888888
Q ss_pred c-ccc-CCCccccccc-------cchhhhcccccceeecch
Q 035742 107 Q-LSG-KIPLEVGLLT-------HLKVLHFQFNQLKLLVLV 138 (214)
Q Consensus 107 ~-l~g-~~p~~~~~l~-------~L~~L~l~~N~l~g~~p~ 138 (214)
+ ++| .+|..++.++ +|++|++++|+++ .+|.
T Consensus 526 ~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~ 565 (876)
T 4ecn_A 526 RGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPA 565 (876)
T ss_dssp TTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCC
T ss_pred CCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCC
Confidence 7 777 6777666665 7777777777777 4443
No 81
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.14 E-value=2.6e-11 Score=105.90 Aligned_cols=92 Identities=20% Similarity=0.208 Sum_probs=69.1
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccc-cCCCccccccccchh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLS-GKIPLEVGLLTHLKV 124 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~-g~~p~~~~~l~~L~~ 124 (214)
..+|+.|++++|.+.+..+...+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.++ +.+|..+..+++|++
T Consensus 395 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~ 474 (570)
T 2z63_A 395 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474 (570)
T ss_dssp CTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred cCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCE
Confidence 3467888888888775544245777788888888888887777777777888888888888776 567777777888888
Q ss_pred hhcccccceeecc
Q 035742 125 LHFQFNQLKLLVL 137 (214)
Q Consensus 125 L~l~~N~l~g~~p 137 (214)
|++++|++++.+|
T Consensus 475 L~l~~n~l~~~~~ 487 (570)
T 2z63_A 475 LDLSQCQLEQLSP 487 (570)
T ss_dssp EECTTSCCCEECT
T ss_pred EECCCCccccCCh
Confidence 8888888777755
No 82
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.14 E-value=3.4e-11 Score=104.84 Aligned_cols=91 Identities=24% Similarity=0.235 Sum_probs=78.7
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeecccccccc-CCCccccccccchh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSG-KIPLEVGLLTHLKV 124 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~ 124 (214)
..+|++|++++|.+++..| ..|..+++|++|++++|.+++..|..++.+++|++|++++|.+++ ..|..++++++|++
T Consensus 49 l~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 127 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEG-DAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQT 127 (549)
T ss_dssp CTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCE
T ss_pred CCcccEEECCCCCcCccCh-hhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccE
Confidence 4589999999999997666 789999999999999999998777779999999999999999986 35778899999999
Q ss_pred hhcccccceeecc
Q 035742 125 LHFQFNQLKLLVL 137 (214)
Q Consensus 125 L~l~~N~l~g~~p 137 (214)
|++++|++.+.+|
T Consensus 128 L~L~~n~~~~~~~ 140 (549)
T 2z81_A 128 LRIGNVETFSEIR 140 (549)
T ss_dssp EEEEESSSCCEEC
T ss_pred EECCCCccccccC
Confidence 9999998655555
No 83
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.14 E-value=3.4e-11 Score=106.09 Aligned_cols=94 Identities=13% Similarity=0.010 Sum_probs=78.8
Q ss_pred CCCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchh
Q 035742 45 DAGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKV 124 (214)
Q Consensus 45 ~~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 124 (214)
...+|++|+|++|.+++..| ..|.++++|++|++++|.+.+..|..++.+++|++|++++|.+++..|..++++++|++
T Consensus 55 ~l~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~ 133 (606)
T 3t6q_A 55 RLINLTFLDLTRCQIYWIHE-DTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLES 133 (606)
T ss_dssp TCTTCSEEECTTCCCCEECT-TTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCE
T ss_pred cCccceEEECCCCccceeCh-hhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccE
Confidence 34578999999999987667 88999999999999999998788888999999999999999998666777888889999
Q ss_pred hhccccccee-ecchh
Q 035742 125 LHFQFNQLKL-LVLVL 139 (214)
Q Consensus 125 L~l~~N~l~g-~~p~~ 139 (214)
|++++|++++ .+|.+
T Consensus 134 L~L~~n~l~~~~~~~~ 149 (606)
T 3t6q_A 134 LYLGSNHISSIKLPKG 149 (606)
T ss_dssp EECCSSCCCCCCCCTT
T ss_pred EECCCCcccccCcccc
Confidence 9999998887 33543
No 84
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.13 E-value=4.9e-11 Score=89.13 Aligned_cols=103 Identities=19% Similarity=0.078 Sum_probs=78.4
Q ss_pred CCCeEEEEecCCCCccccCccccCCCC-CCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFP-QLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKV 124 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 124 (214)
..+|+.|++++|.++ .+| . +..+. +|+.|++++|.+++. ..+..+++|++|++++|.+++..+..+..+++|++
T Consensus 18 ~~~L~~L~l~~n~l~-~i~-~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 18 AVRDRELDLRGYKIP-VIE-N-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 92 (176)
T ss_dssp TTSCEEEECTTSCCC-SCC-C-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred cCCceEEEeeCCCCc-hhH-H-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCE
Confidence 357999999999999 566 4 55544 999999999999854 68899999999999999999544444599999999
Q ss_pred hhcccccceeecc--hhhhhcCCCCchhhhh
Q 035742 125 LHFQFNQLKLLVL--VLEVIKGKHPRDFLCS 153 (214)
Q Consensus 125 L~l~~N~l~g~~p--~~~~l~g~~p~~~~~~ 153 (214)
|++++|+++...+ .+..+....-.++..|
T Consensus 93 L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N 123 (176)
T 1a9n_A 93 LILTNNSLVELGDLDPLASLKSLTYLCILRN 123 (176)
T ss_dssp EECCSCCCCCGGGGGGGGGCTTCCEEECCSS
T ss_pred EECCCCcCCcchhhHhhhcCCCCCEEEecCC
Confidence 9999999965333 3444433333344443
No 85
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.13 E-value=5.8e-11 Score=97.14 Aligned_cols=89 Identities=18% Similarity=0.248 Sum_probs=64.8
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLH 126 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 126 (214)
.+|+.|++++|.+++..+ ..|..+++|+.|++++|.+++..+..+..+++|+.|++++|+++ .+|..+..+++|++|+
T Consensus 192 ~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~ 269 (330)
T 1xku_A 192 PSLTELHLDGNKITKVDA-ASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVY 269 (330)
T ss_dssp TTCSEEECTTSCCCEECT-GGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEE
T ss_pred ccCCEEECCCCcCCccCH-HHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEE
Confidence 457777777777775555 67777777777777777777666666777777777777777777 7777777777777777
Q ss_pred cccccceeecc
Q 035742 127 FQFNQLKLLVL 137 (214)
Q Consensus 127 l~~N~l~g~~p 137 (214)
+++|++++..+
T Consensus 270 l~~N~i~~~~~ 280 (330)
T 1xku_A 270 LHNNNISAIGS 280 (330)
T ss_dssp CCSSCCCCCCT
T ss_pred CCCCcCCccCh
Confidence 77777775443
No 86
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.12 E-value=7.6e-11 Score=98.62 Aligned_cols=90 Identities=19% Similarity=0.227 Sum_probs=70.5
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCcc-ccccccchhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLE-VGLLTHLKVL 125 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~l~~L~~L 125 (214)
.+|+.|++++|.+++..+ ..|..+++|++|++++|.+.+..|..+..+++|++|++++|.++ .+|.. |.++++|++|
T Consensus 69 ~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L 146 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDT-YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTL 146 (390)
T ss_dssp CCCSEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred ccCcEEECCCCcccccCh-hhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEE
Confidence 478888888888885444 67888888888888888888777777888888888888888888 45544 5788888888
Q ss_pred hcccccceeecch
Q 035742 126 HFQFNQLKLLVLV 138 (214)
Q Consensus 126 ~l~~N~l~g~~p~ 138 (214)
++++|++++..|.
T Consensus 147 ~L~~n~l~~~~~~ 159 (390)
T 3o6n_A 147 SMSNNNLERIEDD 159 (390)
T ss_dssp ECCSSCCCBCCTT
T ss_pred ECCCCccCccChh
Confidence 8888888776553
No 87
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.12 E-value=5.6e-11 Score=104.09 Aligned_cols=85 Identities=24% Similarity=0.244 Sum_probs=74.2
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLH 126 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 126 (214)
.+++.|++++|.+++..+ ..|.++++|++|++++|.+++..|..|..+++|++|++++|+++ .+|.. .+++|++|+
T Consensus 52 ~~L~~L~Ls~N~i~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 52 PRTKALSLSQNSISELRM-PDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp TTCCEEECCSSCCCCCCG-GGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCcCEEECCCCCccccCh-hhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 578999999999996555 78999999999999999999877888999999999999999998 67766 788899999
Q ss_pred cccccceee
Q 035742 127 FQFNQLKLL 135 (214)
Q Consensus 127 l~~N~l~g~ 135 (214)
+++|++++.
T Consensus 128 Ls~N~l~~l 136 (562)
T 3a79_B 128 LSFNDFDVL 136 (562)
T ss_dssp CCSSCCSBC
T ss_pred CCCCCcccc
Confidence 999988873
No 88
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.12 E-value=6.9e-11 Score=102.32 Aligned_cols=92 Identities=16% Similarity=0.178 Sum_probs=78.6
Q ss_pred CCCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcC--CChhhhhCCcccceeeccccccccCCCcc-cccccc
Q 035742 45 DAGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLG--TIPSQIGNLSKLSYISLQSNQLSGKIPLE-VGLLTH 121 (214)
Q Consensus 45 ~~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~l~~ 121 (214)
...+|+.|++++|.+++.+| ..+..+++|+.|++++|.+++ .+|..+..+++|++|++++|.+++.+|.. +..+++
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVF-ENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTT-TTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hCCcccEEEeECCccChhhh-hhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 44679999999999998788 889999999999999999986 56678999999999999999999757764 777888
Q ss_pred chhhhcccccceeecc
Q 035742 122 LKVLHFQFNQLKLLVL 137 (214)
Q Consensus 122 L~~L~l~~N~l~g~~p 137 (214)
|++|++++|++++.+|
T Consensus 401 L~~L~Ls~N~l~~~~~ 416 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIF 416 (520)
T ss_dssp CCEEECCSSCCCGGGG
T ss_pred CCEEECcCCCCCcchh
Confidence 8888888888876655
No 89
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.12 E-value=6.3e-11 Score=101.60 Aligned_cols=91 Identities=19% Similarity=0.127 Sum_probs=66.7
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
..+|++|+|++|.+++..| ..|.++++|++|++++|.++...+..|..+++|++|++++|++.+..|..|..+++|++|
T Consensus 55 l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 133 (477)
T 2id5_A 55 FPHLEELELNENIVSAVEP-GAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSL 133 (477)
T ss_dssp CTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccCEeCh-hhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEE
Confidence 3467788888888776556 777778888888888887775444456777778888887777776667777777777777
Q ss_pred hcccccceeecc
Q 035742 126 HFQFNQLKLLVL 137 (214)
Q Consensus 126 ~l~~N~l~g~~p 137 (214)
++++|.+++..+
T Consensus 134 ~l~~n~l~~~~~ 145 (477)
T 2id5_A 134 EVGDNDLVYISH 145 (477)
T ss_dssp EECCTTCCEECT
T ss_pred ECCCCccceeCh
Confidence 777777776554
No 90
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.11 E-value=6.3e-11 Score=108.67 Aligned_cols=92 Identities=23% Similarity=0.202 Sum_probs=63.3
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCcc--ccccccch
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLE--VGLLTHLK 123 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~--~~~l~~L~ 123 (214)
..+|+.|+|++|.+.+.++...|.++++|++|++++|.+.+..|..|..+++|++|++++|.+++.+|.. |+++++|+
T Consensus 47 l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~ 126 (844)
T 3j0a_A 47 LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALT 126 (844)
T ss_dssp CCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCC
T ss_pred cccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCC
Confidence 3467777777776555663266777777777777777777666777777777777777777777655554 67777777
Q ss_pred hhhcccccceeecc
Q 035742 124 VLHFQFNQLKLLVL 137 (214)
Q Consensus 124 ~L~l~~N~l~g~~p 137 (214)
+|++++|.+++..+
T Consensus 127 ~L~Ls~N~l~~~~~ 140 (844)
T 3j0a_A 127 RLDLSKNQIRSLYL 140 (844)
T ss_dssp EEEEESCCCCCCCC
T ss_pred EEECCCCccccccc
Confidence 77777777766543
No 91
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.10 E-value=6.2e-11 Score=103.45 Aligned_cols=92 Identities=24% Similarity=0.310 Sum_probs=80.0
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCc-CCChhhhhCCcccceeeccccccccCCCccccccccchh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFL-GTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKV 124 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~-~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 124 (214)
..+|+.|++++|.+.+..| ..|..+++|+.|++++|.+. +.+|..+..+++|+.|++++|++++..|..|..+++|++
T Consensus 420 l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 498 (570)
T 2z63_A 420 LRNLIYLDISHTHTRVAFN-GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 498 (570)
T ss_dssp CTTCCEEECTTSCCEECCT-TTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCCCEEeCcCCcccccch-hhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCE
Confidence 4578999999999987777 88889999999999999987 578888899999999999999999878888999999999
Q ss_pred hhcccccceeecch
Q 035742 125 LHFQFNQLKLLVLV 138 (214)
Q Consensus 125 L~l~~N~l~g~~p~ 138 (214)
|++++|++++.+|.
T Consensus 499 L~l~~n~l~~~~~~ 512 (570)
T 2z63_A 499 LNMASNQLKSVPDG 512 (570)
T ss_dssp EECCSSCCSCCCTT
T ss_pred EeCCCCcCCCCCHH
Confidence 99999998887653
No 92
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.10 E-value=1.2e-10 Score=95.04 Aligned_cols=113 Identities=19% Similarity=0.150 Sum_probs=72.0
Q ss_pred cceeeeCCCCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhh-CCcccceeeccccccccCCCccc
Q 035742 38 WFGISCSDAGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIG-NLSKLSYISLQSNQLSGKIPLEV 116 (214)
Q Consensus 38 w~gv~c~~~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~ls~N~l~g~~p~~~ 116 (214)
..++.+....+|+.|++++|.+++..+ ..+..+++|+.|++++|.+++..+..+. .+++|++|++++|.+++. |. .
T Consensus 111 l~~~~~~~~~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~ 187 (317)
T 3o53_A 111 ISRVSCSRGQGKKNIYLANNKITMLRD-LDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-Q 187 (317)
T ss_dssp CSEEEECCCSSCEEEECCSSCCCSGGG-BCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-C
T ss_pred cCCcCccccCCCCEEECCCCCCCCccc-hhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-c
Confidence 344444444567777777777775444 6677777888888888887766666553 577777777777777633 32 2
Q ss_pred cccccchhhhcccccceeecchhhhhcCCCCchhhhh
Q 035742 117 GLLTHLKVLHFQFNQLKLLVLVLEVIKGKHPRDFLCS 153 (214)
Q Consensus 117 ~~l~~L~~L~l~~N~l~g~~p~~~~l~g~~p~~~~~~ 153 (214)
..+++|++|++++|++++.++.+..+....-.++..|
T Consensus 188 ~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N 224 (317)
T 3o53_A 188 VVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNN 224 (317)
T ss_dssp CCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTS
T ss_pred cccccCCEEECCCCcCCcchhhhcccCcccEEECcCC
Confidence 3467777777777777776665544444444444433
No 93
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.10 E-value=5.8e-11 Score=97.28 Aligned_cols=89 Identities=18% Similarity=0.235 Sum_probs=72.4
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLH 126 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 126 (214)
.+|+.|++++|.+++..+ ..|..+++|+.|++++|.+.+..+..+..+++|+.|++++|+++ .+|..+..+++|++|+
T Consensus 193 ~~L~~L~l~~n~i~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~ 270 (332)
T 2ft3_A 193 ETLNELHLDHNKIQAIEL-EDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVY 270 (332)
T ss_dssp SSCSCCBCCSSCCCCCCT-TSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEE
T ss_pred CCCCEEECCCCcCCccCH-HHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEE
Confidence 467888888888886655 67888888888888888888777777888888888888888888 7888888888888888
Q ss_pred cccccceeecc
Q 035742 127 FQFNQLKLLVL 137 (214)
Q Consensus 127 l~~N~l~g~~p 137 (214)
+++|++++..+
T Consensus 271 l~~N~l~~~~~ 281 (332)
T 2ft3_A 271 LHTNNITKVGV 281 (332)
T ss_dssp CCSSCCCBCCT
T ss_pred CCCCCCCccCh
Confidence 88888876544
No 94
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.09 E-value=4.5e-11 Score=103.50 Aligned_cols=84 Identities=21% Similarity=0.226 Sum_probs=44.9
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeecccccccc-CCCccccccccchhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSG-KIPLEVGLLTHLKVL 125 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L 125 (214)
.+|+.|++++|.+++..| ..|..+++|++|++++|.++ .+|.. .+++|++|++++|.+++ .+|..|+++++|++|
T Consensus 45 ~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L 120 (520)
T 2z7x_B 45 SKLRILIISHNRIQYLDI-SVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFL 120 (520)
T ss_dssp TTCCEEECCSSCCCEEEG-GGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEE
T ss_pred ccccEEecCCCccCCcCh-HHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEE
Confidence 345555555555554434 45555555555555555555 34433 45555555555555554 245555555555555
Q ss_pred hccccccee
Q 035742 126 HFQFNQLKL 134 (214)
Q Consensus 126 ~l~~N~l~g 134 (214)
++++|++++
T Consensus 121 ~L~~n~l~~ 129 (520)
T 2z7x_B 121 GLSTTHLEK 129 (520)
T ss_dssp EEEESSCCG
T ss_pred EecCcccch
Confidence 555555543
No 95
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.06 E-value=1.8e-10 Score=100.84 Aligned_cols=92 Identities=17% Similarity=0.188 Sum_probs=77.7
Q ss_pred CCCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcC--CChhhhhCCcccceeeccccccccCCCc-ccccccc
Q 035742 45 DAGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLG--TIPSQIGNLSKLSYISLQSNQLSGKIPL-EVGLLTH 121 (214)
Q Consensus 45 ~~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~l~~ 121 (214)
...+|+.|++++|.+++.+| ..+..+++|+.|++++|.+++ .+|..+..+++|+.|++++|++++.+|. .+..+++
T Consensus 351 ~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 351 SPSSFTFLNFTQNVFTDSVF-QGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SCCCCCEEECCSSCCCTTTT-TTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred CCCCceEEECCCCccccchh-hhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 45689999999999998888 889999999999999999986 3456788999999999999999975665 4778888
Q ss_pred chhhhcccccceeecc
Q 035742 122 LKVLHFQFNQLKLLVL 137 (214)
Q Consensus 122 L~~L~l~~N~l~g~~p 137 (214)
|++|++++|++++.+|
T Consensus 430 L~~L~l~~n~l~~~~~ 445 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVF 445 (562)
T ss_dssp CCEEECCSSCCCGGGG
T ss_pred CCEEECCCCCCCcchh
Confidence 8888888888877654
No 96
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.05 E-value=9.7e-11 Score=101.19 Aligned_cols=94 Identities=21% Similarity=0.194 Sum_probs=73.8
Q ss_pred CCCeEEEEecCCCCccccCccccC-CCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFS-SFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKV 124 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~-~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 124 (214)
..+|+.|+|++|.+++..| ..+. .+++|+.|++++|.+++. | .+..+++|+.|++++|.+++ +|..+..+++|+.
T Consensus 143 l~~L~~L~Ls~N~l~~~~~-~~l~~~l~~L~~L~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~ 218 (487)
T 3oja_A 143 RSRVQYLDLKLNEIDTVNF-AELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTW 218 (487)
T ss_dssp GSSEEEEECTTSCCCEEEG-GGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSE
T ss_pred CCCCCEEECCCCCCCCcCh-HHHhhhCCcccEEecCCCccccc-c-ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccE
Confidence 3579999999999998777 6665 789999999999998855 3 34468889999999999985 5556888889999
Q ss_pred hhcccccceeecchhhhhc
Q 035742 125 LHFQFNQLKLLVLVLEVIK 143 (214)
Q Consensus 125 L~l~~N~l~g~~p~~~~l~ 143 (214)
|++++|.+++.++.+..+.
T Consensus 219 L~Ls~N~l~~lp~~l~~l~ 237 (487)
T 3oja_A 219 ISLRNNKLVLIEKALRFSQ 237 (487)
T ss_dssp EECTTSCCCEECTTCCCCT
T ss_pred EEecCCcCcccchhhccCC
Confidence 9999999987655444333
No 97
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.05 E-value=1.5e-10 Score=94.04 Aligned_cols=86 Identities=16% Similarity=0.040 Sum_probs=71.7
Q ss_pred CeEEEEecCCCCccccCcccc--CCCCCCcEEeCcCCcCcCCCh----hhhhCCcccceeeccccccccCCCcccccccc
Q 035742 48 RVINISLRNTGLSGTLSDFSF--SSFPQLVHLDLSLNGFLGTIP----SQIGNLSKLSYISLQSNQLSGKIPLEVGLLTH 121 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~--~~l~~L~~L~l~~n~l~~~~p----~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~ 121 (214)
+|++|++++|.+++..| ..+ ..+++|+.|++++|.+++..+ ..+..+++|++|++++|.+.+..|..|+.+++
T Consensus 92 ~L~~L~l~~n~l~~~~~-~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 92 RLKELTLEDLKITGTMP-PLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp CCCEEEEESCCCBSCCC-CCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred ceeEEEeeCCEeccchh-hhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 58999999999998888 776 888999999999999887554 34557888999999999988777788888888
Q ss_pred chhhhccccccee
Q 035742 122 LKVLHFQFNQLKL 134 (214)
Q Consensus 122 L~~L~l~~N~l~g 134 (214)
|++|++++|++.+
T Consensus 171 L~~L~Ls~N~l~~ 183 (310)
T 4glp_A 171 LTSLDLSDNPGLG 183 (310)
T ss_dssp CCEEECCSCTTCH
T ss_pred CCEEECCCCCCcc
Confidence 8888888888765
No 98
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.04 E-value=8.3e-11 Score=103.46 Aligned_cols=96 Identities=26% Similarity=0.410 Sum_probs=68.8
Q ss_pred CCCCcCCCCCCCCCCcCc-----cccee-eeCCCCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhh
Q 035742 19 LPSWTNATTNVSSKICPC-----AWFGI-SCSDAGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQI 92 (214)
Q Consensus 19 ~~~W~~~~~~~~~~~~~c-----~w~gv-~c~~~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~ 92 (214)
+.+| ..+.. +| .|.|+ .|.. ++++.|++++|.|++ +| ..+ +++|+.|++++|.|+ .+|
T Consensus 33 l~~W-~~~~~------~~~~~~~~~~~l~~C~~-~~L~~L~Ls~n~L~~-lp-~~l--~~~L~~L~Ls~N~l~-~ip--- 96 (571)
T 3cvr_A 33 WDKW-EKQAL------PGENRNEAVSLLKECLI-NQFSELQLNRLNLSS-LP-DNL--PPQITVLEITQNALI-SLP--- 96 (571)
T ss_dssp HHHH-HTTCC------TTCCHHHHHHHHHHHHH-TTCSEEECCSSCCSC-CC-SCC--CTTCSEEECCSSCCS-CCC---
T ss_pred HHHH-hccCC------ccccccchhhhcccccc-CCccEEEeCCCCCCc-cC-HhH--cCCCCEEECcCCCCc-ccc---
Confidence 4567 34444 67 79999 6753 479999999999985 77 544 377888888888887 566
Q ss_pred hCCcccceeeccccccccCCCccccccccchhhhccccccee
Q 035742 93 GNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKL 134 (214)
Q Consensus 93 ~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g 134 (214)
..+++|+.|++++|+|++ +|. +.. +|++|++++|+|++
T Consensus 97 ~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~ 134 (571)
T 3cvr_A 97 ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM 134 (571)
T ss_dssp CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC
T ss_pred cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC
Confidence 456778888888887774 666 544 66667777776666
No 99
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.04 E-value=1.6e-10 Score=103.19 Aligned_cols=89 Identities=24% Similarity=0.202 Sum_probs=50.3
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhc
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHF 127 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 127 (214)
+|+.|+|++|.++ .+|...|.++++|++|++++|.+.+..|..|+.+++|++|++++|.+++..|..++++++|++|++
T Consensus 74 ~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 152 (680)
T 1ziw_A 74 MLKVLNLQHNELS-QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLL 152 (680)
T ss_dssp TCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEEC
T ss_pred CcCEEECCCCccC-ccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEc
Confidence 4555555555555 333134555666666666666555444455556666666666666665555555555666666666
Q ss_pred ccccceeecc
Q 035742 128 QFNQLKLLVL 137 (214)
Q Consensus 128 ~~N~l~g~~p 137 (214)
++|.+++..+
T Consensus 153 ~~n~l~~~~~ 162 (680)
T 1ziw_A 153 SNNKIQALKS 162 (680)
T ss_dssp CSSCCCCBCH
T ss_pred cCCcccccCH
Confidence 6666555443
No 100
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.03 E-value=2e-10 Score=97.71 Aligned_cols=90 Identities=20% Similarity=0.198 Sum_probs=76.8
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
..+|+.|++++|.++ .+| .+..+++|+.|++++|.+++..|..|..+++|+.|++++|++++..+..|.++++|++|
T Consensus 184 l~~L~~L~L~~n~l~-~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 260 (440)
T 3zyj_A 184 LSNLRYLNLAMCNLR-EIP--NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEI 260 (440)
T ss_dssp CSSCCEEECTTSCCS-SCC--CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEE
T ss_pred ccccCeecCCCCcCc-ccc--ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEE
Confidence 457889999999988 666 58888999999999999987778888899999999999999988788888888999999
Q ss_pred hcccccceeecch
Q 035742 126 HFQFNQLKLLVLV 138 (214)
Q Consensus 126 ~l~~N~l~g~~p~ 138 (214)
+|++|++++..+.
T Consensus 261 ~L~~N~l~~~~~~ 273 (440)
T 3zyj_A 261 NLAHNNLTLLPHD 273 (440)
T ss_dssp ECTTSCCCCCCTT
T ss_pred ECCCCCCCccChh
Confidence 9999988876654
No 101
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.03 E-value=1.6e-10 Score=93.97 Aligned_cols=92 Identities=23% Similarity=0.260 Sum_probs=74.6
Q ss_pred CCCCeEEEEecCCCCcc--ccCccccCCCCCCcEEeCcCCcCcCCCh-hhhhCCcccceeeccccccccCCCcccccccc
Q 035742 45 DAGRVINISLRNTGLSG--TLSDFSFSSFPQLVHLDLSLNGFLGTIP-SQIGNLSKLSYISLQSNQLSGKIPLEVGLLTH 121 (214)
Q Consensus 45 ~~~~L~~L~L~~n~l~g--~~p~~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~ 121 (214)
...+|+.|++++|.+++ .++...+..+++|+.|++++|.+++..| ..+..+++|++|++++|+++ .+|..+. ++
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~ 275 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AK 275 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CC
Confidence 45689999999999983 2331345688999999999999997775 45667899999999999999 8888776 89
Q ss_pred chhhhcccccceeecchhh
Q 035742 122 LKVLHFQFNQLKLLVLVLE 140 (214)
Q Consensus 122 L~~L~l~~N~l~g~~p~~~ 140 (214)
|++|++++|++++. |.+.
T Consensus 276 L~~L~Ls~N~l~~~-p~~~ 293 (312)
T 1wwl_A 276 LSVLDLSYNRLDRN-PSPD 293 (312)
T ss_dssp EEEEECCSSCCCSC-CCTT
T ss_pred ceEEECCCCCCCCC-hhHh
Confidence 99999999999886 4443
No 102
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.03 E-value=2.2e-10 Score=97.73 Aligned_cols=90 Identities=20% Similarity=0.163 Sum_probs=76.9
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
..+|+.|+|++|.++ .+| .+..+++|+.|++++|.+++..|..|..+++|+.|++++|++++..|..|..+++|+.|
T Consensus 195 l~~L~~L~L~~n~l~-~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 271 (452)
T 3zyi_A 195 LFNLKYLNLGMCNIK-DMP--NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVEL 271 (452)
T ss_dssp CTTCCEEECTTSCCS-SCC--CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccc-ccc--cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEE
Confidence 457899999999988 455 58888999999999999988888889999999999999999988888888889999999
Q ss_pred hcccccceeecch
Q 035742 126 HFQFNQLKLLVLV 138 (214)
Q Consensus 126 ~l~~N~l~g~~p~ 138 (214)
+|++|++++.++.
T Consensus 272 ~L~~N~l~~~~~~ 284 (452)
T 3zyi_A 272 NLAHNNLSSLPHD 284 (452)
T ss_dssp ECCSSCCSCCCTT
T ss_pred ECCCCcCCccChH
Confidence 9999998876654
No 103
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.02 E-value=4.2e-10 Score=92.88 Aligned_cols=90 Identities=26% Similarity=0.276 Sum_probs=71.9
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCc--cccccccch
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPL--EVGLLTHLK 123 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~--~~~~l~~L~ 123 (214)
..+|+.|++++|.+++..+ ..|.++++|++|++++|.+++..+..+..+++|++|++++|+++ .+|. .+..+++|+
T Consensus 75 l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~ 152 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEE-DSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQ 152 (353)
T ss_dssp CTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCC
T ss_pred CCCCCEEECCCCccCccCH-hhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCc
Confidence 4578999999999986656 77899999999999999998655555888999999999999988 5554 678888888
Q ss_pred hhhccccc-ceeecc
Q 035742 124 VLHFQFNQ-LKLLVL 137 (214)
Q Consensus 124 ~L~l~~N~-l~g~~p 137 (214)
+|++++|+ +++..+
T Consensus 153 ~L~l~~n~~~~~~~~ 167 (353)
T 2z80_A 153 ILRVGNMDTFTKIQR 167 (353)
T ss_dssp EEEEEESSSCCEECT
T ss_pred EEECCCCccccccCH
Confidence 88888884 554433
No 104
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.00 E-value=1.7e-10 Score=90.16 Aligned_cols=89 Identities=15% Similarity=0.233 Sum_probs=62.8
Q ss_pred CCCeEEEEecCCC-CccccCccccCCCCCCcEEeCcC-CcCcCCChhhhhCCcccceeeccccccccCCCccccccccch
Q 035742 46 AGRVINISLRNTG-LSGTLSDFSFSSFPQLVHLDLSL-NGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLK 123 (214)
Q Consensus 46 ~~~L~~L~L~~n~-l~g~~p~~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~ 123 (214)
..+|+.|++++|. ++ .++...|.++++|+.|++++ |.+++..+..|..+++|++|++++|.+++ +|. +..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~ 130 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTD 130 (239)
T ss_dssp CTTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCC
T ss_pred CCCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccc
Confidence 3467888888886 66 44425677788888888887 77775555667777888888888887773 665 66666666
Q ss_pred ---hhhcccc-cceeecc
Q 035742 124 ---VLHFQFN-QLKLLVL 137 (214)
Q Consensus 124 ---~L~l~~N-~l~g~~p 137 (214)
+|++++| ++++..+
T Consensus 131 ~L~~L~l~~N~~l~~i~~ 148 (239)
T 2xwt_C 131 IFFILEITDNPYMTSIPV 148 (239)
T ss_dssp SEEEEEEESCTTCCEECT
T ss_pred cccEEECCCCcchhhcCc
Confidence 7777777 6666554
No 105
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.98 E-value=4.3e-10 Score=92.34 Aligned_cols=85 Identities=27% Similarity=0.375 Sum_probs=60.2
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLH 126 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 126 (214)
.+|+.|++++|.++ .++ . +..+++|+.|++++|.+++ + +.+..+++|+.|++++|.+++ + ..+..+++|+.|+
T Consensus 221 ~~L~~L~l~~n~l~-~~~-~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~ 293 (347)
T 4fmz_A 221 TRLNSLKIGNNKIT-DLS-P-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNSLF 293 (347)
T ss_dssp TTCCEEECCSSCCC-CCG-G-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEE
T ss_pred CcCCEEEccCCccC-CCc-c-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCEEE
Confidence 46788888888877 444 3 7777788888888877764 3 357777777777777777773 3 3467777777777
Q ss_pred cccccceeecch
Q 035742 127 FQFNQLKLLVLV 138 (214)
Q Consensus 127 l~~N~l~g~~p~ 138 (214)
+++|++++..|.
T Consensus 294 L~~n~l~~~~~~ 305 (347)
T 4fmz_A 294 LNNNQLGNEDME 305 (347)
T ss_dssp CCSSCCCGGGHH
T ss_pred CcCCcCCCcChh
Confidence 777777765553
No 106
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.97 E-value=9.8e-10 Score=88.63 Aligned_cols=81 Identities=25% Similarity=0.318 Sum_probs=36.7
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhc
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHF 127 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 127 (214)
+|+.|++++|.+++ ++ .+..+++|+.|++++|.+++ + +.+..+++|+.|++++|++++. ..+..+++|+.|++
T Consensus 91 ~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L 163 (291)
T 1h6t_A 91 NLGWLFLDENKVKD-LS--SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL 163 (291)
T ss_dssp TCCEEECCSSCCCC-GG--GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred CCCEEECCCCcCCC-Ch--hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEc
Confidence 34444444444442 22 24444444444444444442 1 2344444455555555544422 33444455555555
Q ss_pred ccccceee
Q 035742 128 QFNQLKLL 135 (214)
Q Consensus 128 ~~N~l~g~ 135 (214)
++|++++.
T Consensus 164 ~~N~l~~~ 171 (291)
T 1h6t_A 164 EDNQISDI 171 (291)
T ss_dssp CSSCCCCC
T ss_pred cCCccccc
Confidence 55555443
No 107
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.96 E-value=3.6e-10 Score=92.14 Aligned_cols=91 Identities=22% Similarity=0.211 Sum_probs=66.6
Q ss_pred CCeEEEEecCCCCccccCcccc-CCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSF-SSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~-~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
.+|+.|++++|.+++..+ ..+ ..+++|+.|++++|.+++. + ....+++|+.|++++|+++ .+|..+..+++|+.|
T Consensus 144 ~~L~~L~Ls~N~l~~~~~-~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L 219 (317)
T 3o53_A 144 SRVQYLDLKLNEIDTVNF-AELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWI 219 (317)
T ss_dssp SSEEEEECTTSCCCEEEG-GGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEE
T ss_pred CCCCEEECCCCCCCcccH-HHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCC-cchhhhcccCcccEE
Confidence 478888888888886555 555 4678888888888888743 3 3335788888888888888 455568888888888
Q ss_pred hcccccceeecchhhh
Q 035742 126 HFQFNQLKLLVLVLEV 141 (214)
Q Consensus 126 ~l~~N~l~g~~p~~~~ 141 (214)
++++|++++..+.+..
T Consensus 220 ~L~~N~l~~l~~~~~~ 235 (317)
T 3o53_A 220 SLRNNKLVLIEKALRF 235 (317)
T ss_dssp ECTTSCCCEECTTCCC
T ss_pred ECcCCcccchhhHhhc
Confidence 8888888865444433
No 108
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.96 E-value=9.1e-12 Score=94.90 Aligned_cols=82 Identities=21% Similarity=0.246 Sum_probs=55.0
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLH 126 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 126 (214)
.+|+.|++++|.+++ +| .+..+++|+.|++++|.++ .+|..+..+++|+.|++++|++++ +| .+..+++|++|+
T Consensus 48 ~~L~~L~ls~n~l~~-l~--~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~ 121 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS--SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTCSEEECSEEEESC-CC--CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEE
T ss_pred CCCCEEECCCCCCcc-cc--ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEE
Confidence 456777777777763 44 5666677777777777776 566666666777777777777763 44 466667777777
Q ss_pred ccccccee
Q 035742 127 FQFNQLKL 134 (214)
Q Consensus 127 l~~N~l~g 134 (214)
+++|++++
T Consensus 122 l~~N~i~~ 129 (198)
T 1ds9_A 122 MSNNKITN 129 (198)
T ss_dssp ESEEECCC
T ss_pred CCCCcCCc
Confidence 77777664
No 109
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.96 E-value=1.3e-09 Score=88.66 Aligned_cols=80 Identities=23% Similarity=0.351 Sum_probs=35.5
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhc
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHF 127 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 127 (214)
+|+.|++++|.+++ ++ .+..+++|+.|++++|.+++ ++. +..+++|+.|++++|.+++ ++. +..+++|++|++
T Consensus 86 ~L~~L~L~~n~l~~-~~--~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 158 (308)
T 1h6u_A 86 KITELELSGNPLKN-VS--AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITN-ISP-LAGLTNLQYLSI 158 (308)
T ss_dssp SCCEEECCSCCCSC-CG--GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEEC
T ss_pred CCCEEEccCCcCCC-ch--hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCc-Ccc-ccCCCCccEEEc
Confidence 45555555555542 22 34445555555555555442 221 4444444444444444442 222 344444444444
Q ss_pred cccccee
Q 035742 128 QFNQLKL 134 (214)
Q Consensus 128 ~~N~l~g 134 (214)
++|++++
T Consensus 159 ~~n~l~~ 165 (308)
T 1h6u_A 159 GNAQVSD 165 (308)
T ss_dssp CSSCCCC
T ss_pred cCCcCCC
Confidence 4444443
No 110
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.95 E-value=1.6e-09 Score=87.32 Aligned_cols=97 Identities=22% Similarity=0.245 Sum_probs=76.8
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
..+|+.|++++|.++ .++ + +..+++|+.|++++|.+++ +| .+..+++|+.|++++|++++ + ..+..+++|++|
T Consensus 67 l~~L~~L~L~~n~l~-~~~-~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L 139 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLT-DIK-P-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESL 139 (291)
T ss_dssp CTTCCEEECCSSCCC-CCG-G-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEE
T ss_pred CCCCCEEEccCCccC-CCc-c-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEE
Confidence 357999999999998 455 4 8999999999999999984 44 58999999999999999984 4 468889999999
Q ss_pred hcccccceeecchhhhhcCCCCchh
Q 035742 126 HFQFNQLKLLVLVLEVIKGKHPRDF 150 (214)
Q Consensus 126 ~l~~N~l~g~~p~~~~l~g~~p~~~ 150 (214)
++++|++++. +.+..+....-.++
T Consensus 140 ~l~~n~l~~~-~~l~~l~~L~~L~L 163 (291)
T 1h6t_A 140 YLGNNKITDI-TVLSRLTKLDTLSL 163 (291)
T ss_dssp ECCSSCCCCC-GGGGGCTTCSEEEC
T ss_pred EccCCcCCcc-hhhccCCCCCEEEc
Confidence 9999999876 55544444333333
No 111
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.95 E-value=1.4e-09 Score=86.55 Aligned_cols=98 Identities=20% Similarity=0.272 Sum_probs=70.1
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLH 126 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 126 (214)
.+|+.|++++|.++ .++ + +..+++|+.|++++|.+++ +|.. .. ++|+.|++++|++++ ++ .+..+++|+.|+
T Consensus 63 ~~L~~L~L~~N~i~-~~~-~-l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 63 TNLKELHLSHNQIS-DLS-P-LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILS 134 (263)
T ss_dssp TTCCEEECCSSCCC-CCG-G-GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEE
T ss_pred CCCCEEECCCCccC-CCh-h-hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEE
Confidence 47888888888887 455 4 8888888888888888874 4432 23 788888888888874 44 588888999999
Q ss_pred cccccceeecchhhhhcCCCCchhhhh
Q 035742 127 FQFNQLKLLVLVLEVIKGKHPRDFLCS 153 (214)
Q Consensus 127 l~~N~l~g~~p~~~~l~g~~p~~~~~~ 153 (214)
+++|++++. +.+..+....-.++..|
T Consensus 135 Ls~N~i~~~-~~l~~l~~L~~L~L~~N 160 (263)
T 1xeu_A 135 IRNNKLKSI-VMLGFLSKLEVLDLHGN 160 (263)
T ss_dssp CTTSCCCBC-GGGGGCTTCCEEECTTS
T ss_pred CCCCcCCCC-hHHccCCCCCEEECCCC
Confidence 999988875 45555544444444433
No 112
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.94 E-value=1.5e-09 Score=88.13 Aligned_cols=90 Identities=21% Similarity=0.389 Sum_probs=74.7
Q ss_pred CCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 46 AGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
..+|+.|++++|.++ .++ . +..+++|++|++++|.+.+ ++ .+..+++|+.|++++|.+++ ++. +..+++|++|
T Consensus 62 l~~L~~L~L~~n~i~-~~~-~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L 134 (308)
T 1h6u_A 62 LNNLIGLELKDNQIT-DLA-P-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVL 134 (308)
T ss_dssp CTTCCEEECCSSCCC-CCG-G-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEE
T ss_pred cCCCCEEEccCCcCC-CCh-h-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEE
Confidence 357999999999998 566 4 8999999999999999984 44 68899999999999999984 554 8899999999
Q ss_pred hcccccceeecchhhhhc
Q 035742 126 HFQFNQLKLLVLVLEVIK 143 (214)
Q Consensus 126 ~l~~N~l~g~~p~~~~l~ 143 (214)
++++|++++..+ +..+.
T Consensus 135 ~l~~n~l~~~~~-l~~l~ 151 (308)
T 1h6u_A 135 YLDLNQITNISP-LAGLT 151 (308)
T ss_dssp ECCSSCCCCCGG-GGGCT
T ss_pred ECCCCccCcCcc-ccCCC
Confidence 999999987654 43333
No 113
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.94 E-value=1.4e-09 Score=86.40 Aligned_cols=99 Identities=24% Similarity=0.266 Sum_probs=73.7
Q ss_pred CCCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchh
Q 035742 45 DAGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKV 124 (214)
Q Consensus 45 ~~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 124 (214)
...+|+.|++++|.++ .+| . +.. ++|+.|++++|.+++ ++ .+..+++|+.|++++|++++ ++ .+..+++|+.
T Consensus 83 ~l~~L~~L~L~~N~l~-~l~-~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~ 154 (263)
T 1xeu_A 83 DLTKLEELSVNRNRLK-NLN-G-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEV 154 (263)
T ss_dssp TCSSCCEEECCSSCCS-CCT-T-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCE
T ss_pred cCCCCCEEECCCCccC-CcC-c-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCC-Ch-HHccCCCCCE
Confidence 3457899999999998 455 3 333 889999999999985 33 58889999999999999984 44 6888899999
Q ss_pred hhcccccceeecchhhhhcCCCCchhhh
Q 035742 125 LHFQFNQLKLLVLVLEVIKGKHPRDFLC 152 (214)
Q Consensus 125 L~l~~N~l~g~~p~~~~l~g~~p~~~~~ 152 (214)
|++++|++++. +.+..+....-.++..
T Consensus 155 L~L~~N~i~~~-~~l~~l~~L~~L~l~~ 181 (263)
T 1xeu_A 155 LDLHGNEITNT-GGLTRLKKVNWIDLTG 181 (263)
T ss_dssp EECTTSCCCBC-TTSTTCCCCCEEEEEE
T ss_pred EECCCCcCcch-HHhccCCCCCEEeCCC
Confidence 99999998876 4444444433333333
No 114
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.93 E-value=3e-10 Score=92.25 Aligned_cols=87 Identities=17% Similarity=0.169 Sum_probs=46.6
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCC--Chhh--hhCCcccceeeccccccccCCCc----cccc
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGT--IPSQ--IGNLSKLSYISLQSNQLSGKIPL----EVGL 118 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~--~p~~--~~~l~~L~~L~ls~N~l~g~~p~----~~~~ 118 (214)
.+|+.|+|++|.+++..+ ..|..+++|++|++++|.+.+. ++.. +..+++|++|++++|+++ .++. .++.
T Consensus 145 ~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~ 222 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSC-EQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAA 222 (310)
T ss_dssp SCCCEEEEECCSSCCCCT-TSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHH
T ss_pred cCCCEEEeeCCCcchhhH-HHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhc
Confidence 356666666666654444 5566666666666666665431 1111 245555566666665554 2222 1344
Q ss_pred cccchhhhcccccceee
Q 035742 119 LTHLKVLHFQFNQLKLL 135 (214)
Q Consensus 119 l~~L~~L~l~~N~l~g~ 135 (214)
+++|++|++++|++++.
T Consensus 223 l~~L~~L~Ls~N~l~~~ 239 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRAT 239 (310)
T ss_dssp TCCCSSEECTTSCCCCC
T ss_pred CCCCCEEECCCCCCCcc
Confidence 55566666666665554
No 115
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.91 E-value=1.3e-09 Score=96.65 Aligned_cols=82 Identities=26% Similarity=0.332 Sum_probs=38.5
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhc
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHF 127 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 127 (214)
+|+.|+|++|.|++ +| .+..+++|+.|+|++|.+.+ + +.+..+++|+.|+|++|.+++. ..+..+++|+.|+|
T Consensus 88 ~L~~L~Ls~N~l~~-l~--~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~L 160 (605)
T 1m9s_A 88 NLGWLFLDENKIKD-LS--SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL 160 (605)
T ss_dssp TCCEEECCSSCCCC-CT--TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEEC
T ss_pred CCCEEECcCCCCCC-Ch--hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEEC
Confidence 45555555555542 22 34555555555555555542 2 2344444455555555444422 33444444444444
Q ss_pred ccccceeec
Q 035742 128 QFNQLKLLV 136 (214)
Q Consensus 128 ~~N~l~g~~ 136 (214)
++|++++.+
T Consensus 161 s~N~l~~~~ 169 (605)
T 1m9s_A 161 EDNQISDIV 169 (605)
T ss_dssp CSSCCCCCG
T ss_pred cCCcCCCch
Confidence 444444433
No 116
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.90 E-value=2.4e-09 Score=94.81 Aligned_cols=89 Identities=30% Similarity=0.437 Sum_probs=51.3
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLH 126 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 126 (214)
.+|+.|+|++|.+.+ ++ .+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++..| +..+++|+.|+
T Consensus 109 ~~L~~L~Ls~N~l~~-l~--~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 181 (605)
T 1m9s_A 109 KKLKSLSLEHNGISD-IN--GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 181 (605)
T ss_dssp TTCCEEECTTSCCCC-CG--GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred CCCCEEEecCCCCCC-Cc--cccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEE
Confidence 356666666666653 32 456666666666666666543 455666666666666666664333 56666666666
Q ss_pred cccccceeecchhhhhc
Q 035742 127 FQFNQLKLLVLVLEVIK 143 (214)
Q Consensus 127 l~~N~l~g~~p~~~~l~ 143 (214)
|++|+|++. |.+..+.
T Consensus 182 Ls~N~i~~l-~~l~~l~ 197 (605)
T 1m9s_A 182 LSKNHISDL-RALAGLK 197 (605)
T ss_dssp CCSSCCCBC-GGGTTCT
T ss_pred CcCCCCCCC-hHHccCC
Confidence 666666553 3443333
No 117
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.88 E-value=1.6e-09 Score=88.93 Aligned_cols=101 Identities=22% Similarity=0.288 Sum_probs=84.0
Q ss_pred CCCCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchh
Q 035742 45 DAGRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKV 124 (214)
Q Consensus 45 ~~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 124 (214)
...+|+.|++++|.+++ + +.+..+++|+.|++++|.+++. +.+..+++|+.|++++|.+++..|..+..+++|++
T Consensus 241 ~l~~L~~L~l~~n~l~~-~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 315 (347)
T 4fmz_A 241 NLSQLTWLEIGTNQISD-I--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTT 315 (347)
T ss_dssp TCTTCCEEECCSSCCCC-C--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSE
T ss_pred cCCCCCEEECCCCccCC-C--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCE
Confidence 34589999999999984 4 4689999999999999999854 46889999999999999999888888999999999
Q ss_pred hhcccccceeecchhhhhcCCCCchhh
Q 035742 125 LHFQFNQLKLLVLVLEVIKGKHPRDFL 151 (214)
Q Consensus 125 L~l~~N~l~g~~p~~~~l~g~~p~~~~ 151 (214)
|++++|++++.+| +..+....-.++.
T Consensus 316 L~L~~n~l~~~~~-~~~l~~L~~L~l~ 341 (347)
T 4fmz_A 316 LFLSQNHITDIRP-LASLSKMDSADFA 341 (347)
T ss_dssp EECCSSSCCCCGG-GGGCTTCSEESSS
T ss_pred EEccCCccccccC-hhhhhccceeehh
Confidence 9999999998777 5555444434333
No 118
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.81 E-value=2.5e-09 Score=94.09 Aligned_cols=82 Identities=21% Similarity=0.239 Sum_probs=60.6
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCccc-------ceeeccccccccCCCcccccc
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKL-------SYISLQSNQLSGKIPLEVGLL 119 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L-------~~L~ls~N~l~g~~p~~~~~l 119 (214)
.+|+.|+|++|.|++ +| . |. ++|+.|++++|.|+ .+|. +.. +| +.|++++|+|+ .+|..+..+
T Consensus 160 ~~L~~L~Ls~N~L~~-lp-~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l 229 (571)
T 3cvr_A 160 TSLEVLSVRNNQLTF-LP-E-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSL 229 (571)
T ss_dssp TTCCEEECCSSCCSC-CC-C-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGS
T ss_pred CCcCEEECCCCCCCC-cc-h-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcC
Confidence 467777777777774 66 4 54 77888888888887 6665 443 66 88888888888 678878888
Q ss_pred ccchhhhcccccceeecch
Q 035742 120 THLKVLHFQFNQLKLLVLV 138 (214)
Q Consensus 120 ~~L~~L~l~~N~l~g~~p~ 138 (214)
++|+.|+|++|++++.+|.
T Consensus 230 ~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 230 DPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp CTTEEEECCSSSCCHHHHH
T ss_pred CCCCEEEeeCCcCCCcCHH
Confidence 8888888888888887764
No 119
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.81 E-value=5e-09 Score=89.68 Aligned_cols=66 Identities=26% Similarity=0.317 Sum_probs=30.7
Q ss_pred cCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhcccccceeecc
Q 035742 68 FSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKLLVL 137 (214)
Q Consensus 68 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p 137 (214)
+..+++|+.|++++|.+++..| +..+++|+.|++++|.+++. ..+..+++|+.|++++|++++.+|
T Consensus 305 ~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~ 370 (466)
T 1o6v_A 305 ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 370 (466)
T ss_dssp GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG
T ss_pred hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch
Confidence 3344444444444444443322 34444444444444444422 234455555555555555555544
No 120
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.81 E-value=6.7e-09 Score=88.87 Aligned_cols=82 Identities=27% Similarity=0.458 Sum_probs=41.1
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhc
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHF 127 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 127 (214)
+|+.|++++|.+++ ++ .+..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|++
T Consensus 244 ~L~~L~l~~n~l~~-~~--~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L 316 (466)
T 1o6v_A 244 NLTDLDLANNQISN-LA--PLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTL 316 (466)
T ss_dssp TCSEEECCSSCCCC-CG--GGTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEEC
T ss_pred CCCEEECCCCcccc-ch--hhhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEEC
Confidence 45666666666553 22 15555555555555555553222 4455555555555555553222 444455555555
Q ss_pred ccccceeec
Q 035742 128 QFNQLKLLV 136 (214)
Q Consensus 128 ~~N~l~g~~ 136 (214)
++|++++..
T Consensus 317 ~~n~l~~~~ 325 (466)
T 1o6v_A 317 YFNNISDIS 325 (466)
T ss_dssp CSSCCSCCG
T ss_pred cCCcCCCch
Confidence 555554443
No 121
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.78 E-value=8.4e-11 Score=89.49 Aligned_cols=87 Identities=17% Similarity=0.098 Sum_probs=77.1
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCC--ccccccccchh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIP--LEVGLLTHLKV 124 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p--~~~~~l~~L~~ 124 (214)
.+|+.|++++|.++ .+| ..+..+++|+.|++++|.+++ +| .+..+++|+.|++++|+++ .++ ..+..+++|++
T Consensus 70 ~~L~~L~l~~n~l~-~l~-~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~-~~~~~~~l~~l~~L~~ 144 (198)
T 1ds9_A 70 ENLRILSLGRNLIK-KIE-NLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKIT-NWGEIDKLAALDKLED 144 (198)
T ss_dssp TTCCEEEEEEEEEC-SCS-SHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECC-CHHHHHHHTTTTTCSE
T ss_pred CCCCEEECCCCCcc-ccc-chhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCC-chhHHHHHhcCCCCCE
Confidence 57999999999999 788 778888999999999999985 55 7999999999999999998 444 47889999999
Q ss_pred hhcccccceeecch
Q 035742 125 LHFQFNQLKLLVLV 138 (214)
Q Consensus 125 L~l~~N~l~g~~p~ 138 (214)
|++++|.+++.+|.
T Consensus 145 L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 145 LLLAGNPLYNDYKE 158 (198)
T ss_dssp EEECSCHHHHHHHT
T ss_pred EEecCCcccccccc
Confidence 99999999988764
No 122
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.77 E-value=8.2e-09 Score=88.44 Aligned_cols=77 Identities=21% Similarity=0.270 Sum_probs=38.4
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhc
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHF 127 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 127 (214)
+|+.|++++|.+++ +| +..+++|++|++++|.+++. + ++.+++|++|++++|++++ +| ++.+++|++|++
T Consensus 65 ~L~~L~Ls~n~l~~-~~---~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l 134 (457)
T 3bz5_A 65 GLTKLICTSNNITT-LD---LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNC 134 (457)
T ss_dssp TCSEEECCSSCCSC-CC---CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCEEEccCCcCCe-Ec---cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEEC
Confidence 44555555555543 22 44555555555555555432 2 4455555555555555553 32 455555555555
Q ss_pred cccccee
Q 035742 128 QFNQLKL 134 (214)
Q Consensus 128 ~~N~l~g 134 (214)
++|++++
T Consensus 135 ~~N~l~~ 141 (457)
T 3bz5_A 135 ARNTLTE 141 (457)
T ss_dssp TTSCCSC
T ss_pred CCCccce
Confidence 5555554
No 123
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.75 E-value=2.3e-08 Score=85.68 Aligned_cols=78 Identities=21% Similarity=0.258 Sum_probs=39.6
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLH 126 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 126 (214)
.+|+.|++++|.+++ +| +..+++|+.|++++|.+++. .++.+++|+.|++++|++++ +| ++.+++|++|+
T Consensus 170 ~~L~~L~ls~n~l~~-l~---l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~ 239 (457)
T 3bz5_A 170 TQLTTLDCSFNKITE-LD---VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFD 239 (457)
T ss_dssp TTCCEEECCSSCCCC-CC---CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEE
T ss_pred CcCCEEECCCCccce-ec---cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEE
Confidence 355566666665553 32 44555555555555555432 24445555555555555553 33 44455555555
Q ss_pred ccccccee
Q 035742 127 FQFNQLKL 134 (214)
Q Consensus 127 l~~N~l~g 134 (214)
+++|++++
T Consensus 240 l~~N~l~~ 247 (457)
T 3bz5_A 240 CSVNPLTE 247 (457)
T ss_dssp CCSSCCSC
T ss_pred eeCCcCCC
Confidence 55555544
No 124
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.72 E-value=1.3e-09 Score=91.11 Aligned_cols=87 Identities=21% Similarity=0.284 Sum_probs=59.5
Q ss_pred CCeEEEEecCCCCc--c---ccCccccCCCCCCcEEeCcCCcCc----CCChhhhhCCcccceeeccccccccC----CC
Q 035742 47 GRVINISLRNTGLS--G---TLSDFSFSSFPQLVHLDLSLNGFL----GTIPSQIGNLSKLSYISLQSNQLSGK----IP 113 (214)
Q Consensus 47 ~~L~~L~L~~n~l~--g---~~p~~~~~~l~~L~~L~l~~n~l~----~~~p~~~~~l~~L~~L~ls~N~l~g~----~p 113 (214)
.+|+.|++++|.++ | .++ ..+..+++|+.|++++|.++ +.+|..+..+++|+.|++++|.+++. +|
T Consensus 187 ~~L~~L~L~~n~l~~~g~~~l~~-~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~ 265 (386)
T 2ca6_A 187 RLLHTVKMVQNGIRPEGIEHLLL-EGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVV 265 (386)
T ss_dssp TTCCEEECCSSCCCHHHHHHHHH-TTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHH
T ss_pred CCcCEEECcCCCCCHhHHHHHHH-HHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHH
Confidence 36777777777776 2 222 36667777777777777774 45677777777777777777777654 44
Q ss_pred ccc--cccccchhhhccccccee
Q 035742 114 LEV--GLLTHLKVLHFQFNQLKL 134 (214)
Q Consensus 114 ~~~--~~l~~L~~L~l~~N~l~g 134 (214)
..+ +.+++|++|+|++|.+++
T Consensus 266 ~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 266 DAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp HHHHTCSSCCCCEEECCSSCCBH
T ss_pred HHHhhccCCCeEEEECcCCcCCH
Confidence 555 336777777777777776
No 125
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.72 E-value=1.2e-08 Score=87.22 Aligned_cols=58 Identities=29% Similarity=0.481 Sum_probs=44.0
Q ss_pred CCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhccccccee--ecc
Q 035742 72 PQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLKL--LVL 137 (214)
Q Consensus 72 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g--~~p 137 (214)
++|+.|++++|++++ +|.. +++|+.|++++|+++ .+|. .+++|++|++++|++++ .+|
T Consensus 317 ~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip 376 (454)
T 1jl5_A 317 PSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIP 376 (454)
T ss_dssp TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCC
T ss_pred CcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCCh
Confidence 478888888888874 5543 577888888888888 5666 46788888888888887 455
No 126
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.71 E-value=1.2e-08 Score=90.55 Aligned_cols=82 Identities=22% Similarity=0.222 Sum_probs=61.6
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLH 126 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 126 (214)
.+|+.|++++|.|+ .+| ..+++|+.|++++|.|+ .+|. .+++|+.|++++|+|+ .+|..+.++++|+.|+
T Consensus 221 ~~L~~L~Ls~N~L~-~lp----~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~ 290 (622)
T 3g06_A 221 SGLKELIVSGNRLT-SLP----VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVN 290 (622)
T ss_dssp TTCCEEECCSSCCS-CCC----CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEE
T ss_pred CCCCEEEccCCccC-cCC----CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEE
Confidence 35666666666666 344 34567777888888777 4554 5678888888888888 7788888888899999
Q ss_pred cccccceeecch
Q 035742 127 FQFNQLKLLVLV 138 (214)
Q Consensus 127 l~~N~l~g~~p~ 138 (214)
+++|.+++.+|.
T Consensus 291 L~~N~l~~~~~~ 302 (622)
T 3g06_A 291 LEGNPLSERTLQ 302 (622)
T ss_dssp CCSCCCCHHHHH
T ss_pred ecCCCCCCcCHH
Confidence 999988887765
No 127
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.67 E-value=6.8e-09 Score=84.70 Aligned_cols=84 Identities=21% Similarity=0.160 Sum_probs=46.1
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCC-ChhhhhCCcccceeeccccccccCCCccccccccchhhh
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGT-IPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLH 126 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~-~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 126 (214)
+++.|++++|.+.+..+ .+..+++|+.|++++|.+++. ++..+..+++|++|++++|.+++..|..++.+++|++|+
T Consensus 71 ~l~~L~l~~n~l~~~~~--~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 71 GVIAFRCPRSFMDQPLA--EHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TCSEEECTTCEECSCCC--SCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred cceEEEcCCccccccch--hhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 45555555555554333 244555666666666655543 555555555666666665555555555555555555555
Q ss_pred cccc-cce
Q 035742 127 FQFN-QLK 133 (214)
Q Consensus 127 l~~N-~l~ 133 (214)
+++| .++
T Consensus 149 L~~~~~l~ 156 (336)
T 2ast_B 149 LSGCSGFS 156 (336)
T ss_dssp CTTCBSCC
T ss_pred CCCCCCCC
Confidence 5555 344
No 128
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.66 E-value=1.8e-09 Score=88.11 Aligned_cols=85 Identities=19% Similarity=0.205 Sum_probs=42.8
Q ss_pred CeEEEEecCCCCccc-cCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeecccc-ccccC-CCccccccccchh
Q 035742 48 RVINISLRNTGLSGT-LSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSN-QLSGK-IPLEVGLLTHLKV 124 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~-~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N-~l~g~-~p~~~~~l~~L~~ 124 (214)
+|+.|++++|.+++. ++ ..+..+++|+.|++++|.+++..+..++.+++|++|++++| .+++. ++..+..+++|++
T Consensus 94 ~L~~L~L~~~~l~~~~~~-~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 94 RVQHMDLSNSVIEVSTLH-GILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp CCCEEECTTCEECHHHHH-HHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCEEEccCCCcCHHHHH-HHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 455555555555433 44 44555555555555555555445555555555555555555 34431 3333444445555
Q ss_pred hhcccc-cce
Q 035742 125 LHFQFN-QLK 133 (214)
Q Consensus 125 L~l~~N-~l~ 133 (214)
|++++| .++
T Consensus 173 L~l~~~~~l~ 182 (336)
T 2ast_B 173 LNLSWCFDFT 182 (336)
T ss_dssp EECCCCTTCC
T ss_pred EcCCCCCCcC
Confidence 555554 444
No 129
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.66 E-value=3.1e-09 Score=88.73 Aligned_cols=89 Identities=18% Similarity=0.261 Sum_probs=60.2
Q ss_pred CCeEEEEecCCCCc-cccCc--cccCCCCCCcEEeCcCCcCc--C---CChhhhhCCcccceeeccccccc----cCCCc
Q 035742 47 GRVINISLRNTGLS-GTLSD--FSFSSFPQLVHLDLSLNGFL--G---TIPSQIGNLSKLSYISLQSNQLS----GKIPL 114 (214)
Q Consensus 47 ~~L~~L~L~~n~l~-g~~p~--~~~~~l~~L~~L~l~~n~l~--~---~~p~~~~~l~~L~~L~ls~N~l~----g~~p~ 114 (214)
.+|+.|++++|.++ +.++. ..+..+++|+.|++++|.++ | ..|..+..+++|+.|++++|.++ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 56777777777776 22330 24556777777887777776 2 23336667777777787777774 45677
Q ss_pred cccccccchhhhcccccceee
Q 035742 115 EVGLLTHLKVLHFQFNQLKLL 135 (214)
Q Consensus 115 ~~~~l~~L~~L~l~~N~l~g~ 135 (214)
.+..+++|++|+|++|.+++.
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~ 259 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSAR 259 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHH
T ss_pred HHccCCCcCEEECCCCCCchh
Confidence 777777777777777777654
No 130
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.63 E-value=5.5e-09 Score=92.80 Aligned_cols=75 Identities=23% Similarity=0.328 Sum_probs=41.9
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhc
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHF 127 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 127 (214)
+++.|++++|+++ .+| ..+. ++|+.|++++|.++ .+|. .+++|++|++++|+|+ .+|. .+++|++|++
T Consensus 41 ~l~~L~ls~n~L~-~lp-~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~L 108 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLP-DCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSI 108 (622)
T ss_dssp CCCEEECCSSCCS-CCC-SCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEE
T ss_pred CCcEEEecCCCcC-ccC-hhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEEC
Confidence 4666666666666 556 4443 56666666666665 3443 4455666666666655 4444 3344555555
Q ss_pred cccccee
Q 035742 128 QFNQLKL 134 (214)
Q Consensus 128 ~~N~l~g 134 (214)
++|++++
T Consensus 109 s~N~l~~ 115 (622)
T 3g06_A 109 FSNPLTH 115 (622)
T ss_dssp CSCCCCC
T ss_pred cCCcCCC
Confidence 5555444
No 131
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.63 E-value=8.7e-09 Score=85.39 Aligned_cols=86 Identities=19% Similarity=0.177 Sum_probs=49.5
Q ss_pred CeEEEEecCCCCccccCccccCCC-----CCCcEEeCcCCcCcCCChhhhhC----C-cccceeeccccccccCCCcccc
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSF-----PQLVHLDLSLNGFLGTIPSQIGN----L-SKLSYISLQSNQLSGKIPLEVG 117 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l-----~~L~~L~l~~n~l~~~~p~~~~~----l-~~L~~L~ls~N~l~g~~p~~~~ 117 (214)
+|++|+|++|.+++..+ ..+..+ ++|+.|++++|.+++..+..+.. + ++|+.|++++|.+++..+..+.
T Consensus 52 ~L~~L~Ls~N~l~~~~~-~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~ 130 (362)
T 3goz_A 52 SVTSLNLSGNSLGFKNS-DELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFK 130 (362)
T ss_dssp TCCEEECCSSCGGGSCH-HHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred ceeEEECcCCCCCHHHH-HHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHH
Confidence 56666666666664434 444443 66666666666666555554333 2 5666666666666644443332
Q ss_pred c-----cccchhhhccccccee
Q 035742 118 L-----LTHLKVLHFQFNQLKL 134 (214)
Q Consensus 118 ~-----l~~L~~L~l~~N~l~g 134 (214)
. .++|++|++++|+++.
T Consensus 131 ~~l~~~~~~L~~L~Ls~N~l~~ 152 (362)
T 3goz_A 131 QAFSNLPASITSLNLRGNDLGI 152 (362)
T ss_dssp HHHTTSCTTCCEEECTTSCGGG
T ss_pred HHHHhCCCceeEEEccCCcCCH
Confidence 2 2466666777666663
No 132
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.59 E-value=1.8e-08 Score=83.54 Aligned_cols=90 Identities=21% Similarity=0.227 Sum_probs=75.0
Q ss_pred CCeEEEEecCCCCccccCc----cccCCCC-CCcEEeCcCCcCcCCChhhhhCC-----cccceeeccccccccCCCccc
Q 035742 47 GRVINISLRNTGLSGTLSD----FSFSSFP-QLVHLDLSLNGFLGTIPSQIGNL-----SKLSYISLQSNQLSGKIPLEV 116 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~----~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~l-----~~L~~L~ls~N~l~g~~p~~~ 116 (214)
.+|+.|+|++|.++ ..+. ..|..++ +|+.|++++|.+++..+..+..+ ++|++|++++|.+++..+..+
T Consensus 22 ~~L~~L~Ls~n~l~-~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l 100 (362)
T 3goz_A 22 HGVTSLDLSLNNLY-SISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDEL 100 (362)
T ss_dssp TTCCEEECTTSCGG-GSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH
T ss_pred CCceEEEccCCCCC-hHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHH
Confidence 46999999999998 4442 4567888 89999999999998888888775 999999999999997777655
Q ss_pred ccc-----ccchhhhcccccceeecc
Q 035742 117 GLL-----THLKVLHFQFNQLKLLVL 137 (214)
Q Consensus 117 ~~l-----~~L~~L~l~~N~l~g~~p 137 (214)
... ++|++|++++|++++..+
T Consensus 101 ~~~l~~~~~~L~~L~Ls~N~l~~~~~ 126 (362)
T 3goz_A 101 VKTLAAIPFTITVLDLGWNDFSSKSS 126 (362)
T ss_dssp HHHHHTSCTTCCEEECCSSCGGGSCH
T ss_pred HHHHHhCCCCccEEECcCCcCCcHHH
Confidence 443 899999999999987655
No 133
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.58 E-value=5.6e-08 Score=83.15 Aligned_cols=79 Identities=24% Similarity=0.310 Sum_probs=55.8
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLH 126 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 126 (214)
.+|++|++++|.+++ +| .|..+++|++|++++|.+++ +|..+ .+|++|++++|++++ +| .++++++|++|+
T Consensus 131 ~~L~~L~L~~n~l~~-lp--~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~ 201 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP--ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIY 201 (454)
T ss_dssp TTCCEEECCSSCCSS-CC--CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred CCCCEEECcCCCCCC-Cc--ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEE
Confidence 467777777777774 66 37777888888888887774 45332 467777777777774 55 477777777777
Q ss_pred ccccccee
Q 035742 127 FQFNQLKL 134 (214)
Q Consensus 127 l~~N~l~g 134 (214)
+++|++++
T Consensus 202 l~~N~l~~ 209 (454)
T 1jl5_A 202 ADNNSLKK 209 (454)
T ss_dssp CCSSCCSS
T ss_pred CCCCcCCc
Confidence 77777765
No 134
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.47 E-value=7.3e-08 Score=76.78 Aligned_cols=83 Identities=24% Similarity=0.278 Sum_probs=57.8
Q ss_pred EEecCCCCc---cccCccccCCCCCCcEEeCcCCcCcC--CChhhhhCCcccceeeccccccccCCCccccccc--cchh
Q 035742 52 ISLRNTGLS---GTLSDFSFSSFPQLVHLDLSLNGFLG--TIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLT--HLKV 124 (214)
Q Consensus 52 L~L~~n~l~---g~~p~~~~~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~--~L~~ 124 (214)
++++.|... +.++ ....++++|+.|+|++|.|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++
T Consensus 148 l~l~~N~~~~~~~~l~-i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~ 224 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLR-IIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEE 224 (267)
T ss_dssp CCCCTTSHHHHHHHHH-HHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSE
T ss_pred ccccCCHHHHHHHHHH-HHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcce
Confidence 556666432 2222 222467888888888888886 4556777888888888888888854 3345555 7888
Q ss_pred hhcccccceeecc
Q 035742 125 LHFQFNQLKLLVL 137 (214)
Q Consensus 125 L~l~~N~l~g~~p 137 (214)
|+|++|.+.+.+|
T Consensus 225 L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 225 LWLDGNSLCDTFR 237 (267)
T ss_dssp EECTTSTTGGGCS
T ss_pred EEccCCcCccccC
Confidence 8888888887655
No 135
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.43 E-value=1.6e-08 Score=85.85 Aligned_cols=87 Identities=17% Similarity=0.070 Sum_probs=58.3
Q ss_pred CCeEEEEecCCCCccccCccccC-----CCCCCcEEeCcCCcCcCC----ChhhhhCCcccceeeccccccccCCCcccc
Q 035742 47 GRVINISLRNTGLSGTLSDFSFS-----SFPQLVHLDLSLNGFLGT----IPSQIGNLSKLSYISLQSNQLSGKIPLEVG 117 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~-----~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~ 117 (214)
.+|+.|++++|.++...+ ..+. ..++|+.|++++|.+++. ++..+..+++|+.|++++|.+++..+..+.
T Consensus 284 ~~L~~L~Ls~n~i~~~~~-~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~ 362 (461)
T 1z7x_W 284 ESLKELSLAGNELGDEGA-RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELC 362 (461)
T ss_dssp TTCCEEECTTCCCHHHHH-HHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHH
T ss_pred CCcceEECCCCCCchHHH-HHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHH
Confidence 468888888888764322 2222 235788888888887754 455666778888888888877754444343
Q ss_pred c-----cccchhhhccccccee
Q 035742 118 L-----LTHLKVLHFQFNQLKL 134 (214)
Q Consensus 118 ~-----l~~L~~L~l~~N~l~g 134 (214)
. .++|++|++++|.+++
T Consensus 363 ~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 363 QGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCCH
T ss_pred HHHcCCCCceEEEECCCCCCCh
Confidence 2 4578888888887774
No 136
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.37 E-value=2.2e-07 Score=73.97 Aligned_cols=75 Identities=31% Similarity=0.356 Sum_probs=54.2
Q ss_pred cCCCCCCcE--EeCcCCcCcCCChh----hhhCCcccceeecccccccc--CCCccccccccchhhhcccccceeecchh
Q 035742 68 FSSFPQLVH--LDLSLNGFLGTIPS----QIGNLSKLSYISLQSNQLSG--KIPLEVGLLTHLKVLHFQFNQLKLLVLVL 139 (214)
Q Consensus 68 ~~~l~~L~~--L~l~~n~l~~~~p~----~~~~l~~L~~L~ls~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~ 139 (214)
|...+.|.. ++++.|... .++. ...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-GGG
T ss_pred cCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-hhh
Confidence 444455555 677888543 3333 23568999999999999997 4567778999999999999999975 445
Q ss_pred hhhcC
Q 035742 140 EVIKG 144 (214)
Q Consensus 140 ~~l~g 144 (214)
..+.+
T Consensus 215 ~~l~~ 219 (267)
T 3rw6_A 215 DKIKG 219 (267)
T ss_dssp GGGTT
T ss_pred hhccc
Confidence 55553
No 137
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.32 E-value=3.7e-07 Score=75.18 Aligned_cols=69 Identities=19% Similarity=0.260 Sum_probs=54.8
Q ss_pred CCCCeEEEEecCCCCccccCccccCCCCCCcE-EeCcCCcCcCCChhhhhCCcccceeeccccccccCCC
Q 035742 45 DAGRVINISLRNTGLSGTLSDFSFSSFPQLVH-LDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIP 113 (214)
Q Consensus 45 ~~~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~-L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p 113 (214)
...+|+.|+|++|.+.+.+|...|.++++++. +.++.|++....|..|..+++|++|++++|++.+..+
T Consensus 52 ~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~ 121 (350)
T 4ay9_X 52 GFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPD 121 (350)
T ss_dssp TCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCC
T ss_pred CCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCc
Confidence 34689999999999876777467888988775 5667788986667788999999999999998874333
No 138
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.25 E-value=9.3e-07 Score=72.13 Aligned_cols=88 Identities=15% Similarity=0.171 Sum_probs=75.9
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccc-eeeccccccccCCCccccccccchhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLS-YISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~-~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
.+|+.|+|++|.++ .+|+..|.++.+|+.+++.+| +...-+..|.++.+|+ .+++.+ .++..-+..|.++++|+.+
T Consensus 226 ~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 226 PNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp TTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred CCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 47999999999998 777688999999999999998 7655666799999999 999988 7775667889999999999
Q ss_pred hcccccceeecc
Q 035742 126 HFQFNQLKLLVL 137 (214)
Q Consensus 126 ~l~~N~l~g~~p 137 (214)
+++.|+++...+
T Consensus 303 ~l~~n~i~~I~~ 314 (329)
T 3sb4_A 303 LATGDKITTLGD 314 (329)
T ss_dssp EECSSCCCEECT
T ss_pred EeCCCccCccch
Confidence 999998876543
No 139
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.23 E-value=1.4e-07 Score=80.12 Aligned_cols=86 Identities=23% Similarity=0.268 Sum_probs=50.3
Q ss_pred CeEEEEecCCCCcc----ccCccccCCCCCCcEEeCcCCcCcCCChhhhhC-----CcccceeeccccccccC----CCc
Q 035742 48 RVINISLRNTGLSG----TLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGN-----LSKLSYISLQSNQLSGK----IPL 114 (214)
Q Consensus 48 ~L~~L~L~~n~l~g----~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~-----l~~L~~L~ls~N~l~g~----~p~ 114 (214)
+|++|++++|.++. .++ ..+..+++|++|++++|.++...+..+.. .++|++|++++|.+++. ++.
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~-~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 164 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLS-STLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLAS 164 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHH-HHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHH-HHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHH
Confidence 47777777777662 345 56667777777777777765433333322 34566666666666542 234
Q ss_pred cccccccchhhhccccccee
Q 035742 115 EVGLLTHLKVLHFQFNQLKL 134 (214)
Q Consensus 115 ~~~~l~~L~~L~l~~N~l~g 134 (214)
.+..+++|++|++++|.++.
T Consensus 165 ~l~~~~~L~~L~L~~n~i~~ 184 (461)
T 1z7x_W 165 VLRAKPDFKELTVSNNDINE 184 (461)
T ss_dssp HHHHCTTCCEEECCSSBCHH
T ss_pred HHhhCCCCCEEECcCCCcch
Confidence 44455666666666666543
No 140
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.15 E-value=2.1e-07 Score=77.64 Aligned_cols=85 Identities=16% Similarity=0.205 Sum_probs=45.8
Q ss_pred CeEEEEecCCCCccccCcccc-----CCCCCCcEEeCcCCcCcC----CChhhhhCCcccceeeccccccccC----CCc
Q 035742 48 RVINISLRNTGLSGTLSDFSF-----SSFPQLVHLDLSLNGFLG----TIPSQIGNLSKLSYISLQSNQLSGK----IPL 114 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~-----~~l~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~ls~N~l~g~----~p~ 114 (214)
+++.|+|++|.|+..-. ..+ ...+.|+.|++++|.++. .++..+...++|++|+|++|.|+.. ++.
T Consensus 127 ~L~~L~Ls~n~l~~~~~-~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~ 205 (372)
T 3un9_A 127 RARKLGLQLNSLGPEAC-KDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAA 205 (372)
T ss_dssp TEEEEECCSSCCCHHHH-HHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHH
T ss_pred hccHhhcCCCCCCHHHH-HHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHH
Confidence 56666666666652211 222 234566666666666642 1333345566666666666666531 233
Q ss_pred cccccccchhhhcccccce
Q 035742 115 EVGLLTHLKVLHFQFNQLK 133 (214)
Q Consensus 115 ~~~~l~~L~~L~l~~N~l~ 133 (214)
.+...++|++|+|++|.++
T Consensus 206 ~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 206 QLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp HGGGCSCCCEEECCSSCCC
T ss_pred HHhcCCCcCeEECCCCCCC
Confidence 4445556666666666655
No 141
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.04 E-value=8.7e-07 Score=73.89 Aligned_cols=65 Identities=20% Similarity=0.311 Sum_probs=27.3
Q ss_pred CCCCCCcEEeCcCCcCcCC----ChhhhhCCcccceeeccccccccC----CCccccccccchhhhcccccce
Q 035742 69 SSFPQLVHLDLSLNGFLGT----IPSQIGNLSKLSYISLQSNQLSGK----IPLEVGLLTHLKVLHFQFNQLK 133 (214)
Q Consensus 69 ~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~ 133 (214)
...+.|++|+|++|.++.. +...+...++|+.|++++|.|+.. +...+...++|++|+|++|.|+
T Consensus 180 ~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 180 AGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp HTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCC
T ss_pred hcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCC
Confidence 3444455555555544321 123333444455555555544421 1222223344455555555443
No 142
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.85 E-value=3.2e-06 Score=63.41 Aligned_cols=88 Identities=14% Similarity=0.102 Sum_probs=68.3
Q ss_pred CCCeEEEEecCC-CCccc----cCccccCCCCCCcEEeCcCCcCcCC----ChhhhhCCcccceeeccccccccC----C
Q 035742 46 AGRVINISLRNT-GLSGT----LSDFSFSSFPQLVHLDLSLNGFLGT----IPSQIGNLSKLSYISLQSNQLSGK----I 112 (214)
Q Consensus 46 ~~~L~~L~L~~n-~l~g~----~p~~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~ls~N~l~g~----~ 112 (214)
..+|++|+|++| .+... +. ..+...+.|++|+|++|.+... +...+...++|++|+|++|.|... +
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~-~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l 113 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACA-EALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL 113 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHH-HHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHH-HHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHH
Confidence 457999999999 87632 33 5567788999999999999642 344556678899999999999743 4
Q ss_pred Cccccccccchhhhc--cccccee
Q 035742 113 PLEVGLLTHLKVLHF--QFNQLKL 134 (214)
Q Consensus 113 p~~~~~l~~L~~L~l--~~N~l~g 134 (214)
...+...++|++|+| ++|.+..
T Consensus 114 ~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 114 VEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp HHGGGGCSSCCEEECCCCSSCCCH
T ss_pred HHHHHhCCCceEEEecCCCCCCCH
Confidence 556777788999999 8898864
No 143
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.83 E-value=1.3e-06 Score=76.48 Aligned_cols=63 Identities=17% Similarity=0.133 Sum_probs=30.6
Q ss_pred CCCCcEEeCcCCcCcC-CChhhhhCCcccceeeccccccccC-CCccccccccchhhhcccccce
Q 035742 71 FPQLVHLDLSLNGFLG-TIPSQIGNLSKLSYISLQSNQLSGK-IPLEVGLLTHLKVLHFQFNQLK 133 (214)
Q Consensus 71 l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~ls~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~ 133 (214)
+++|+.|++++|.+++ .++..+..+++|+.|++++|.+++. ++..+..+++|++|++++|+++
T Consensus 462 ~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 462 SPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRAS 526 (592)
T ss_dssp CTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCC
T ss_pred CccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCC
Confidence 4455555555555543 2233334455555555555555432 2222344555555555555544
No 144
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.77 E-value=2.4e-06 Score=64.11 Aligned_cols=87 Identities=20% Similarity=0.173 Sum_probs=67.5
Q ss_pred CCCeEEEEecCCCCccc----cCccccCCCCCCcEEeCcCCcCcCC----ChhhhhCCcccceeec--cccccccC----
Q 035742 46 AGRVINISLRNTGLSGT----LSDFSFSSFPQLVHLDLSLNGFLGT----IPSQIGNLSKLSYISL--QSNQLSGK---- 111 (214)
Q Consensus 46 ~~~L~~L~L~~n~l~g~----~p~~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l--s~N~l~g~---- 111 (214)
..+|++|+|++|.|... +. ..+...+.|++|+|++|.|... +...+...++|++|++ ++|.|...
T Consensus 64 ~~~L~~L~Ls~n~i~~~g~~~l~-~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~ 142 (185)
T 1io0_A 64 NTYVKKFSIVGTRSNDPVAFALA-EMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEME 142 (185)
T ss_dssp CCSCCEEECTTSCCCHHHHHHHH-HHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHH
T ss_pred CCCcCEEECcCCCCChHHHHHHH-HHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHH
Confidence 35799999999998632 33 4455668999999999999743 4556777889999999 88999743
Q ss_pred CCccccccccchhhhcccccce
Q 035742 112 IPLEVGLLTHLKVLHFQFNQLK 133 (214)
Q Consensus 112 ~p~~~~~l~~L~~L~l~~N~l~ 133 (214)
+...+...++|++|++++|.+.
T Consensus 143 l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 143 IANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHhCCCcCEEeccCCCCC
Confidence 3344555688999999999875
No 145
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.70 E-value=7.2e-06 Score=71.64 Aligned_cols=16 Identities=13% Similarity=0.351 Sum_probs=7.6
Q ss_pred cccccchhhhcccccc
Q 035742 117 GLLTHLKVLHFQFNQL 132 (214)
Q Consensus 117 ~~l~~L~~L~l~~N~l 132 (214)
..+++|++|++++|.+
T Consensus 290 ~~~~~L~~L~Ls~~~l 305 (592)
T 3ogk_B 290 PFAAQIRKLDLLYALL 305 (592)
T ss_dssp GGGGGCCEEEETTCCC
T ss_pred hhcCCCcEEecCCCcC
Confidence 3344455555555443
No 146
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.62 E-value=1.9e-05 Score=58.82 Aligned_cols=83 Identities=10% Similarity=0.061 Sum_probs=63.0
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCc-CcCCChhhhhCC----cccceeeccccc-cccCCCcccccccc
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNG-FLGTIPSQIGNL----SKLSYISLQSNQ-LSGKIPLEVGLLTH 121 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l----~~L~~L~ls~N~-l~g~~p~~~~~l~~ 121 (214)
+|++||++++.++..-- ..+.++++|+.|+|+++. ++..--..+..+ ++|++|+++++. ++..--..+.++++
T Consensus 62 ~L~~LDLs~~~Itd~GL-~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGF-DHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CEEEEEEESCCCCGGGG-GGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred eEeEEeCcCCCccHHHH-HHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 69999999999873322 567899999999999985 664444456654 479999999975 76433345678899
Q ss_pred chhhhccccc
Q 035742 122 LKVLHFQFNQ 131 (214)
Q Consensus 122 L~~L~l~~N~ 131 (214)
|++|++++..
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999864
No 147
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.61 E-value=3.8e-05 Score=62.48 Aligned_cols=77 Identities=17% Similarity=0.170 Sum_probs=66.5
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCc-EEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLV-HLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~-~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
.+|+.|+|.+| ++ .+++..|.++.+|+ .+++.+ .++..-+..|.++++|+.++++.|.++..-+..|.++++|+.+
T Consensus 250 ~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 250 KYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp TTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEE
T ss_pred CCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhh
Confidence 47999999998 77 67768899999999 999998 7775566789999999999999999996666789999999887
Q ss_pred h
Q 035742 126 H 126 (214)
Q Consensus 126 ~ 126 (214)
+
T Consensus 327 y 327 (329)
T 3sb4_A 327 Y 327 (329)
T ss_dssp E
T ss_pred c
Confidence 5
No 148
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.57 E-value=6.1e-06 Score=72.11 Aligned_cols=62 Identities=11% Similarity=0.148 Sum_probs=30.3
Q ss_pred CCCCcEEeCcCCcCcCCChhhh-hCCcccceeeccccccccCCCc-cccccccchhhhcccccc
Q 035742 71 FPQLVHLDLSLNGFLGTIPSQI-GNLSKLSYISLQSNQLSGKIPL-EVGLLTHLKVLHFQFNQL 132 (214)
Q Consensus 71 l~~L~~L~l~~n~l~~~~p~~~-~~l~~L~~L~ls~N~l~g~~p~-~~~~l~~L~~L~l~~N~l 132 (214)
+++|+.|++++|.+++.....+ ..+++|+.|++++|.+++.... .+..+++|++|++++|++
T Consensus 455 ~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 455 AKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp CTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred chhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 4455555555555543333333 3455555555555555432222 223355555555555554
No 149
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.39 E-value=2.7e-05 Score=67.96 Aligned_cols=84 Identities=17% Similarity=0.134 Sum_probs=54.6
Q ss_pred CCeEEEEecCCCCccccCccccC-CCCCCcEEeCcCC-cCcCC-ChhhhhCCcccceeeccccccccCCCcccc----cc
Q 035742 47 GRVINISLRNTGLSGTLSDFSFS-SFPQLVHLDLSLN-GFLGT-IPSQIGNLSKLSYISLQSNQLSGKIPLEVG----LL 119 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~-~l~~L~~L~l~~n-~l~~~-~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~----~l 119 (214)
.+|++|+|++|.+++..+ ..+. .+++|+.|++++| .++.. ++..+..+++|++|++++|.+++..+..+. .+
T Consensus 105 ~~L~~L~L~~~~~~~~~~-~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCL-ELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp TTCCEEEEESCBCCHHHH-HHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCeEEeeCcEEcHHHH-HHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 468888888888775554 4444 5778888888877 44422 344445778888888888877654443332 44
Q ss_pred ccchhhhccccc
Q 035742 120 THLKVLHFQFNQ 131 (214)
Q Consensus 120 ~~L~~L~l~~N~ 131 (214)
++|+.|++++|.
T Consensus 184 ~~L~~L~l~~~~ 195 (594)
T 2p1m_B 184 TSLVSLNISCLA 195 (594)
T ss_dssp CCCCEEECTTCC
T ss_pred CcCcEEEecccC
Confidence 567777776664
No 150
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.15 E-value=9.4e-05 Score=61.35 Aligned_cols=87 Identities=13% Similarity=0.216 Sum_probs=48.8
Q ss_pred CCeEEEEecCCCCccccCcccc--CCCCCCcEEeCcC--CcCcCC-----Chhhh--hCCcccceeeccccccccCCCcc
Q 035742 47 GRVINISLRNTGLSGTLSDFSF--SSFPQLVHLDLSL--NGFLGT-----IPSQI--GNLSKLSYISLQSNQLSGKIPLE 115 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~--~~l~~L~~L~l~~--n~l~~~-----~p~~~--~~l~~L~~L~ls~N~l~g~~p~~ 115 (214)
.+|+.|+|..+.+....- ..+ ..+++|+.|+|+. |...+. +...+ ..+++|+.|++.+|.+....+..
T Consensus 193 ~~L~~L~L~~~~l~~~~l-~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~ 271 (362)
T 2ra8_A 193 PNLKSLEIISGGLPDSVV-EDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEM 271 (362)
T ss_dssp TTCSEEEEECSBCCHHHH-HHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHH
T ss_pred CCCcEEEEecCCCChHHH-HHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHH
Confidence 467888887776653221 222 2577777777642 221111 11112 23677777777777765433322
Q ss_pred c---cccccchhhhccccccee
Q 035742 116 V---GLLTHLKVLHFQFNQLKL 134 (214)
Q Consensus 116 ~---~~l~~L~~L~l~~N~l~g 134 (214)
+ ..+++|++|+|+.|.+..
T Consensus 272 la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 272 FLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp HHHCSSGGGCSEEECCSSCCBH
T ss_pred HHhCccCCCCCEEECCCCCCCh
Confidence 2 245677777777777765
No 151
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.00 E-value=0.00094 Score=46.97 Aligned_cols=56 Identities=21% Similarity=0.248 Sum_probs=41.4
Q ss_pred EEEecCCCCc-cccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccc
Q 035742 51 NISLRNTGLS-GTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLS 109 (214)
Q Consensus 51 ~L~L~~n~l~-g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~ 109 (214)
.++-++++++ ..+| ..+ -++|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP-~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLP-TAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSC-SCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCC-CCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5556666665 2455 322 246899999999999555566888999999999999875
No 152
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.90 E-value=0.002 Score=45.22 Aligned_cols=37 Identities=22% Similarity=0.274 Sum_probs=18.6
Q ss_pred ccceeeccccccccCCCccccccccchhhhcccccce
Q 035742 97 KLSYISLQSNQLSGKIPLEVGLLTHLKVLHFQFNQLK 133 (214)
Q Consensus 97 ~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 133 (214)
+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 3555555555555222333455555555555555443
No 153
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.49 E-value=0.0028 Score=53.11 Aligned_cols=81 Identities=15% Similarity=0.154 Sum_probs=48.6
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCc-----CCChhhhhCCcccceeeccccccccCCCcccccccc
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFL-----GTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTH 121 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~-----~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~ 121 (214)
.+|+.+.+. +.++ .++...|.++++|+.+++.+|.+. ..-+..|..+++|+.+.+.. .++..-...|.++++
T Consensus 248 ~~L~~i~lp-~~i~-~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~ 324 (401)
T 4fdw_A 248 SGITTVKLP-NGVT-NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRK 324 (401)
T ss_dssp CCCSEEEEE-TTCC-EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCS
T ss_pred CCccEEEeC-CCcc-EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCC
Confidence 356777773 4455 454466777777777777766553 23344566677777777763 355334455666666
Q ss_pred chhhhcccc
Q 035742 122 LKVLHFQFN 130 (214)
Q Consensus 122 L~~L~l~~N 130 (214)
|+.+.+..|
T Consensus 325 L~~l~lp~~ 333 (401)
T 4fdw_A 325 VTQLTIPAN 333 (401)
T ss_dssp CCEEEECTT
T ss_pred ccEEEECcc
Confidence 666666444
No 154
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.37 E-value=0.0026 Score=53.32 Aligned_cols=77 Identities=13% Similarity=0.184 Sum_probs=34.3
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccc-----cCCCccccccccc
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLS-----GKIPLEVGLLTHL 122 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~-----g~~p~~~~~l~~L 122 (214)
+|+.+++..+ ++ .++...|.+ .+|+.+.+. +.+...-...|.++++|+.+.+.+|.+. ..-+..|.++.+|
T Consensus 227 ~L~~l~l~~~-l~-~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L 302 (401)
T 4fdw_A 227 QLKTIEIPEN-VS-TIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKL 302 (401)
T ss_dssp TCCCEECCTT-CC-EECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTC
T ss_pred CCCEEecCCC-cc-Ccccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccC
Confidence 3445555442 33 333244444 455555552 2333223344555555555555544432 1223344555555
Q ss_pred hhhhcc
Q 035742 123 KVLHFQ 128 (214)
Q Consensus 123 ~~L~l~ 128 (214)
+.+++.
T Consensus 303 ~~l~l~ 308 (401)
T 4fdw_A 303 ARFEIP 308 (401)
T ss_dssp CEECCC
T ss_pred CeEEeC
Confidence 555554
No 155
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=95.82 E-value=0.0015 Score=54.00 Aligned_cols=88 Identities=17% Similarity=0.207 Sum_probs=63.1
Q ss_pred CCCeEEEEecC--CCCccc-----cCcccc--CCCCCCcEEeCcCCcCcCCChhhhh---CCcccceeeccccccccC--
Q 035742 46 AGRVINISLRN--TGLSGT-----LSDFSF--SSFPQLVHLDLSLNGFLGTIPSQIG---NLSKLSYISLQSNQLSGK-- 111 (214)
Q Consensus 46 ~~~L~~L~L~~--n~l~g~-----~p~~~~--~~l~~L~~L~l~~n~l~~~~p~~~~---~l~~L~~L~ls~N~l~g~-- 111 (214)
..+|+.|+|+. |...+. +. ..+ ..+++|+.|++.+|.+....+..+. .+++|+.|+|+.|.+.+.
T Consensus 218 lp~L~~L~L~~~~~~~~~~~~~~~l~-~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~ 296 (362)
T 2ra8_A 218 LPNLEKLVLYVGVEDYGFDGDMNVFR-PLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGA 296 (362)
T ss_dssp CTTCCEEEEECBCGGGTCCSCGGGTG-GGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHH
T ss_pred CCCCcEEEEeccccccccchhHHHHH-HHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHH
Confidence 46899999863 221111 11 122 3589999999999998755454554 578999999999999853
Q ss_pred --CCccccccccchhhhccccccee
Q 035742 112 --IPLEVGLLTHLKVLHFQFNQLKL 134 (214)
Q Consensus 112 --~p~~~~~l~~L~~L~l~~N~l~g 134 (214)
++..+..+++|+.|++++|.++.
T Consensus 297 ~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 297 RLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp HHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred HHHHhhcccCCcceEEECCCCcCCH
Confidence 44455678999999999998764
No 156
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.58 E-value=0.012 Score=48.84 Aligned_cols=77 Identities=17% Similarity=0.161 Sum_probs=34.4
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhc
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHF 127 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 127 (214)
+|+.+.+..+ ++ .+++..|.++.+|+.+++..+ ++..-..+|.++.+|+.+.+..+ ++..-..+|.++.+|+.+++
T Consensus 298 ~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~l 373 (394)
T 4fs7_A 298 SLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVEL 373 (394)
T ss_dssp TCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEE
T ss_pred cccccccccc-cc-eechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEE
Confidence 3444444332 33 333344555555555555432 33222334555555555555444 33222334555555555544
Q ss_pred c
Q 035742 128 Q 128 (214)
Q Consensus 128 ~ 128 (214)
.
T Consensus 374 p 374 (394)
T 4fs7_A 374 P 374 (394)
T ss_dssp E
T ss_pred C
Confidence 3
No 157
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.44 E-value=0.0064 Score=45.89 Aligned_cols=84 Identities=11% Similarity=0.102 Sum_probs=60.3
Q ss_pred CCCeEEEEecCC-CCcc----ccCccccCCCCCCcEEeCcCCcCcC----CChhhhhCCcccceeeccccccccC----C
Q 035742 46 AGRVINISLRNT-GLSG----TLSDFSFSSFPQLVHLDLSLNGFLG----TIPSQIGNLSKLSYISLQSNQLSGK----I 112 (214)
Q Consensus 46 ~~~L~~L~L~~n-~l~g----~~p~~~~~~l~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~ls~N~l~g~----~ 112 (214)
...|++|+|++| .|.. .+- ..+..-+.|+.|+|++|.+.. .+-..+..=+.|+.|+|+.|.|... +
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la-~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~al 118 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLI-EAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 118 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHH-HHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHH-HHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHH
Confidence 457999999986 6642 133 556677899999999999963 2344455567899999999999742 2
Q ss_pred Cccccccccchhhhcccc
Q 035742 113 PLEVGLLTHLKVLHFQFN 130 (214)
Q Consensus 113 p~~~~~l~~L~~L~l~~N 130 (214)
-..+..-+.|+.|+|++|
T Consensus 119 a~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 119 LRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHTTTTCCCSEEECCCC
T ss_pred HHHHhhCCceeEEECCCC
Confidence 233444567999999865
No 158
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.25 E-value=0.024 Score=46.98 Aligned_cols=76 Identities=11% Similarity=0.159 Sum_probs=30.2
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhc
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHF 127 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 127 (214)
.|+.+.+..+-. .+....|.++..|+.+.+.. .+...-...|.++.+|+.+.+..+ ++..-..+|.++.+|+.+.+
T Consensus 266 ~L~~i~lp~~~~--~I~~~aF~~c~~L~~i~l~~-~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 266 YLASVKMPDSVV--SIGTGAFMNCPALQDIEFSS-RITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SCCEEECCTTCC--EECTTTTTTCTTCCEEECCT-TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred cccEEecccccc--eecCcccccccccccccCCC-cccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEE
Confidence 345555543321 22223444445555554432 222122233444444444444332 22122233444444444444
No 159
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.00 E-value=0.028 Score=46.08 Aligned_cols=78 Identities=10% Similarity=0.123 Sum_probs=37.7
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhc
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHF 127 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 127 (214)
.|+.+.+..+ ++ .+.+..|.+...|+.+.+..+ +...-...|..+.+|+.+.+..+.++..-...|.++.+|+.+.+
T Consensus 241 ~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 241 ALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp SCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEEC
T ss_pred cceEEEcCCC-cc-EeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEc
Confidence 4555555543 33 333344555555555555432 22122234555555555555555554233344555555555555
Q ss_pred c
Q 035742 128 Q 128 (214)
Q Consensus 128 ~ 128 (214)
.
T Consensus 318 p 318 (379)
T 4h09_A 318 P 318 (379)
T ss_dssp C
T ss_pred C
Confidence 4
No 160
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=94.96 E-value=0.0057 Score=45.30 Aligned_cols=71 Identities=8% Similarity=-0.001 Sum_probs=50.2
Q ss_pred ccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccc-cccCCCcccccc----ccchhhhccccc-ce
Q 035742 62 TLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQ-LSGKIPLEVGLL----THLKVLHFQFNQ-LK 133 (214)
Q Consensus 62 ~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~-l~g~~p~~~~~l----~~L~~L~l~~N~-l~ 133 (214)
.+| .....-..|+.||++++.++..--..+..+++|+.|+|+++. ++..--..+..+ ++|++|+|+++. ++
T Consensus 52 ~LP-~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~IT 128 (176)
T 3e4g_A 52 HLP-TGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVT 128 (176)
T ss_dssp GSC-CCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCC
T ss_pred cCC-cccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCC
Confidence 345 333333579999999999876555667899999999999985 553322334443 379999999874 54
No 161
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=94.43 E-value=0.039 Score=44.46 Aligned_cols=31 Identities=10% Similarity=0.384 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 180 VQEKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 180 ~~~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
.+..+.+++. .|...+|.+||+|.+|+++|+
T Consensus 266 ~~~~l~~li~---~cl~~dP~~RPs~~ei~~~Le 296 (307)
T 3omv_A 266 CPKAMKRLVA---DCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp SCHHHHHHHH---HHTCSSSTTSCCHHHHHHHHH
T ss_pred chHHHHHHHH---HHcCCCHhHCcCHHHHHHHHH
Confidence 3355555554 499999999999999998875
No 162
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=94.42 E-value=0.041 Score=45.54 Aligned_cols=82 Identities=12% Similarity=0.182 Sum_probs=63.7
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLH 126 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 126 (214)
..|+.+.+. +.++ .+++..|.++.+|+.+++..+ ++..-..+|.++.+|+.+.+..+ ++..-..+|.++++|+.++
T Consensus 288 ~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~ 363 (394)
T 4gt6_A 288 PALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIE 363 (394)
T ss_dssp TTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEE
T ss_pred cccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEE
Confidence 468888886 4566 677688999999999999865 55344567899999999999755 5534456899999999999
Q ss_pred cccccc
Q 035742 127 FQFNQL 132 (214)
Q Consensus 127 l~~N~l 132 (214)
+.+|..
T Consensus 364 ~~~~~~ 369 (394)
T 4gt6_A 364 YSGSRS 369 (394)
T ss_dssp ESSCHH
T ss_pred ECCcee
Confidence 988754
No 163
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=94.36 E-value=0.04 Score=44.38 Aligned_cols=30 Identities=27% Similarity=0.592 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 181 QEKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 181 ~~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
+..+.+++ ..|...+|.+||+|++|+++|+
T Consensus 273 ~~~~~~li---~~C~~~dP~~RPs~~ei~~~L~ 302 (308)
T 4gt4_A 273 PAWVYALM---IECWNEFPSRRPRFKDIHSRLR 302 (308)
T ss_dssp CHHHHHHH---HHHTCSSGGGSCCHHHHHHHHH
T ss_pred hHHHHHHH---HHHcCCChhHCcCHHHHHHHHH
Confidence 34445444 4599999999999999999986
No 164
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=93.58 E-value=0.077 Score=43.08 Aligned_cols=29 Identities=28% Similarity=0.544 Sum_probs=23.4
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++. .|...+|.+||+|.+|+++|+
T Consensus 287 ~~~~~li~---~cl~~dP~~RPs~~ei~~~L~ 315 (329)
T 4aoj_A 287 PEVYAIMR---GCWQREPQQRHSIKDVHARLQ 315 (329)
T ss_dssp HHHHHHHH---HHCCSSTTTSCCHHHHHHHHH
T ss_pred HHHHHHHH---HHcCcChhHCcCHHHHHHHHH
Confidence 44444444 499999999999999999986
No 165
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=93.22 E-value=0.057 Score=44.66 Aligned_cols=74 Identities=15% Similarity=0.220 Sum_probs=55.9
Q ss_pred CCeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhh
Q 035742 47 GRVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVL 125 (214)
Q Consensus 47 ~~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 125 (214)
.+|+.+++..+ ++ .+++..|.++.+|+.+++..+ +...-..+|.++.+|+.+.+..+ +. .+...|.++++|+.+
T Consensus 320 ~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 320 TSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 47899988754 66 676588999999999999877 65445667999999999999765 33 334567777777643
No 166
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=93.13 E-value=0.071 Score=42.67 Aligned_cols=29 Identities=21% Similarity=0.428 Sum_probs=23.4
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++. .|...+|.+||+|++|+++|+
T Consensus 257 ~~~~~li~---~cl~~dP~~RPs~~~i~~~L~ 285 (299)
T 4asz_A 257 QEVYELML---GCWQREPHMRKNIKGIHTLLQ 285 (299)
T ss_dssp HHHHHHHH---HHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHH---HHcCCChhHCcCHHHHHHHHH
Confidence 44454444 499999999999999999886
No 167
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=92.96 E-value=0.11 Score=42.45 Aligned_cols=80 Identities=13% Similarity=0.118 Sum_probs=47.1
Q ss_pred CeEEEEecCCCCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhc
Q 035742 48 RVINISLRNTGLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHF 127 (214)
Q Consensus 48 ~L~~L~L~~n~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 127 (214)
+++.+.+..+ ++ .++...|.++.+|+.+.+.++.+...-...|.++.+|+.+.+..+ ++..-..+|.++.+|+.+.+
T Consensus 264 ~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 264 ALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISY 340 (379)
T ss_dssp TCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCC
T ss_pred hhcccccccc-ce-eccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEE
Confidence 4555655433 44 444356667777777777666665344455667777777776543 44233445666677776666
Q ss_pred ccc
Q 035742 128 QFN 130 (214)
Q Consensus 128 ~~N 130 (214)
..+
T Consensus 341 p~~ 343 (379)
T 4h09_A 341 PKS 343 (379)
T ss_dssp CTT
T ss_pred CCc
Confidence 543
No 168
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=91.47 E-value=0.05 Score=40.94 Aligned_cols=68 Identities=15% Similarity=0.097 Sum_probs=50.1
Q ss_pred ccCCCCCCcEEeCcCC-cCcC----CChhhhhCCcccceeeccccccccC----CCccccccccchhhhccccccee
Q 035742 67 SFSSFPQLVHLDLSLN-GFLG----TIPSQIGNLSKLSYISLQSNQLSGK----IPLEVGLLTHLKVLHFQFNQLKL 134 (214)
Q Consensus 67 ~~~~l~~L~~L~l~~n-~l~~----~~p~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~g 134 (214)
.+.+-+.|+.|+|++| .|.. .+-..+..-+.|+.|+|++|.|... +-..+..-+.|+.|+|+.|.|..
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 3455688999999985 7752 2344566668899999999999732 22334455789999999999873
No 169
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=91.39 E-value=0.12 Score=41.25 Aligned_cols=46 Identities=22% Similarity=0.299 Sum_probs=31.2
Q ss_pred hhcCCCCCCCcchhHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 167 EMLDPRLPTSSCSVQEKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 167 ~~l~~~lp~~~~~~~~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+++.+|..... .+....+..+...|...+|.+||+|.+|+++|+
T Consensus 248 ~~~rp~~p~~~~~-~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 293 (303)
T 3hmm_A 248 QKLRPNIPNRWQS-CEALRVMAKIMRECWYANGAARLTALRIKKTLS 293 (303)
T ss_dssp SCCCCCCCGGGGS-SHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred ccCCCCCCccccc-hHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHH
Confidence 3445556654332 122334455666799999999999999999986
No 170
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=89.97 E-value=0.42 Score=37.51 Aligned_cols=44 Identities=27% Similarity=0.509 Sum_probs=30.2
Q ss_pred hhcCCCCCCCcchhHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 167 EMLDPRLPTSSCSVQEKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 167 ~~l~~~lp~~~~~~~~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..++..++.........+.+++ ..|+..+|.+||++.+|+++|+
T Consensus 259 ~~~~~~~~~~~~~~~~~l~~li---~~cl~~~p~~Rps~~~l~~~L~ 302 (307)
T 2nru_A 259 DYIDKKMNDADSTSVEAMYSVA---SQCLHEKKNKRPDIKKVQQLLQ 302 (307)
T ss_dssp HHSCSSCSCCCHHHHHHHHHHH---HHHTCSSTTTSCCHHHHHHHHH
T ss_pred hhccccccccchHHHHHHHHHH---HHHcCCCcccCcCHHHHHHHHH
Confidence 3444455444444444444444 4499999999999999999986
No 171
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=89.32 E-value=0.3 Score=39.98 Aligned_cols=38 Identities=24% Similarity=0.444 Sum_probs=27.1
Q ss_pred CCCCCCCcchhHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 170 DPRLPTSSCSVQEKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 170 ~~~lp~~~~~~~~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
....|.... ..+.+++. .|...+|.+||++.+|++.|+
T Consensus 306 ~~~~p~~~~---~~~~~li~---~c~~~dP~~RPt~~eil~~L~ 343 (353)
T 4ase_A 306 RMRAPDYTT---PEMYQTML---DCWHGEPSQRPTFSELVEHLG 343 (353)
T ss_dssp CCCCCTTCC---HHHHHHHH---HHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCccCC---HHHHHHHH---HHcCcChhHCcCHHHHHHHHH
Confidence 344555443 34444444 599999999999999999875
No 172
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=89.12 E-value=0.35 Score=38.34 Aligned_cols=30 Identities=33% Similarity=0.636 Sum_probs=25.1
Q ss_pred HHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 184 LISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 184 L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
...+..+...|+..+|.+||++.+|+++|+
T Consensus 278 ~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 307 (326)
T 3uim_A 278 VEQLIQVALLCTQSSPMERPKMSEVVRMLE 307 (326)
T ss_dssp HHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence 345556666699999999999999999996
No 173
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=87.96 E-value=0.58 Score=35.87 Aligned_cols=30 Identities=33% Similarity=0.600 Sum_probs=24.0
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhcC
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQI 214 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~~ 214 (214)
..+.+++.. |...+|.+||++.+|+++|+.
T Consensus 241 ~~~~~li~~---~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 241 EPFAKLMED---CWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHHC
T ss_pred HHHHHHHHH---HhcCCcccCcCHHHHHHHHhc
Confidence 444555554 999999999999999999873
No 174
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=86.79 E-value=0.64 Score=35.47 Aligned_cols=29 Identities=28% Similarity=0.682 Sum_probs=23.6
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+|+++|+
T Consensus 238 ~~~~~li~~---~l~~~p~~Rps~~~il~~L~ 266 (271)
T 3kmu_A 238 PHVSKLMKI---CMNEDPAKRPKFDMIVPILE 266 (271)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcCCChhhCcCHHHHHHHHH
Confidence 444555554 99999999999999999986
No 175
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=86.56 E-value=0.72 Score=36.42 Aligned_cols=30 Identities=10% Similarity=0.372 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 181 QEKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 181 ~~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
+..+.+++.. |...+|.+||++.+|++.|+
T Consensus 267 ~~~l~~li~~---~l~~~p~~RPs~~~il~~l~ 296 (307)
T 3lb7_A 267 PKAMKRLVAD---CVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp CHHHHHHHHH---HSCSSSTTSCCHHHHHHHHH
T ss_pred cHHHHHHHHH---HhhCChhhCcCHHHHHHHHH
Confidence 3555555554 99999999999999999875
No 176
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=86.28 E-value=0.72 Score=36.37 Aligned_cols=31 Identities=23% Similarity=0.569 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 180 VQEKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 180 ~~~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
.+..+.+++.. |...+|.+||++.+|+++|+
T Consensus 229 ~~~~l~~li~~---~l~~dp~~Rps~~ell~~L~ 259 (307)
T 2eva_A 229 LPKPIESLMTR---CWSKDPSQRPSMEEIVKIMT 259 (307)
T ss_dssp CCHHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred cCHHHHHHHHH---HhcCChhhCcCHHHHHHHHH
Confidence 34555555554 99999999999999999875
No 177
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=86.10 E-value=0.55 Score=36.59 Aligned_cols=30 Identities=17% Similarity=0.511 Sum_probs=24.4
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 181 QEKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 181 ~~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
+..+.+++.. |+..+|.+||++.+|+++|+
T Consensus 255 ~~~l~~li~~---~l~~~p~~Rps~~ell~~L~ 284 (289)
T 3og7_A 255 PKRMKRLMAE---CLKKKRDERPSFPRILAEIE 284 (289)
T ss_dssp CHHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred CHHHHHHHHH---HccCChhhCCCHHHHHHHHH
Confidence 3555555555 99999999999999999986
No 178
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=86.02 E-value=1.2 Score=34.65 Aligned_cols=29 Identities=21% Similarity=0.484 Sum_probs=23.7
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |...+|.+||++.+|+++|+
T Consensus 247 ~~l~~li~~---~l~~dp~~Rps~~~l~~~L~ 275 (291)
T 1xbb_A 247 REMYDLMNL---CWTYDVENRPGFAAVELRLR 275 (291)
T ss_dssp HHHHHHHHH---HTCSSTTTSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcCCChhhCcCHHHHHHHHH
Confidence 445555555 99999999999999999986
No 179
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=84.06 E-value=0.88 Score=35.97 Aligned_cols=28 Identities=32% Similarity=0.431 Sum_probs=23.3
Q ss_pred HHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 186 SIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 186 ~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
.+..+...|+..+|.+||++.+|+++|+
T Consensus 284 ~l~~li~~~l~~dP~~Rps~~ell~~L~ 311 (321)
T 2qkw_B 284 KFGDTAVKCLALSSEDRPSMGDVLWKLE 311 (321)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 4445555699999999999999999886
No 180
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=83.81 E-value=1.1 Score=35.64 Aligned_cols=29 Identities=21% Similarity=0.398 Sum_probs=23.3
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+|+++|+
T Consensus 281 ~~l~~li~~---~l~~dp~~Rps~~eil~~L~ 309 (325)
T 3kul_A 281 HALHQLMLD---CWHKDRAQRPRFSQIVSVLD 309 (325)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HccCChhhCcCHHHHHHHHH
Confidence 444444444 99999999999999999986
No 181
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=83.78 E-value=1.4 Score=33.61 Aligned_cols=29 Identities=31% Similarity=0.591 Sum_probs=23.5
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |...+|.+||++.+|++.|+
T Consensus 232 ~~l~~li~~---~l~~~p~~Rps~~~ll~~L~ 260 (268)
T 3sxs_A 232 DTIYQIMYS---CWHELPEKRPTFQQLLSSIE 260 (268)
T ss_dssp HHHHHHHHH---TTCSSGGGSCCHHHHHHHHG
T ss_pred HHHHHHHHH---HcCCChhhCcCHHHHHHHHH
Confidence 444455544 99999999999999999986
No 182
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=83.78 E-value=1.2 Score=34.58 Aligned_cols=29 Identities=17% Similarity=0.421 Sum_probs=23.7
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+++++|+
T Consensus 259 ~~l~~li~~---~l~~~p~~Rps~~ell~~L~ 287 (298)
T 3f66_A 259 DPLYEVMLK---CWHPKAEMRPSFSELVSRIS 287 (298)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcCCChhhCcCHHHHHHHHH
Confidence 445555554 99999999999999999986
No 183
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=83.68 E-value=1.1 Score=35.49 Aligned_cols=29 Identities=28% Similarity=0.612 Sum_probs=23.7
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |...+|.+||++.+|+++|+
T Consensus 303 ~~l~~li~~---~l~~~p~~Rps~~~~~~~L~ 331 (343)
T 1luf_A 303 LELYNLMRL---CWSKLPADRPSFCSIHRILQ 331 (343)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcccCcccCCCHHHHHHHHH
Confidence 445555554 99999999999999999986
No 184
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=83.43 E-value=0.82 Score=35.55 Aligned_cols=28 Identities=14% Similarity=0.235 Sum_probs=23.4
Q ss_pred HHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 186 SIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 186 ~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
.+..+-..|...+|.+||++.+|+++|+
T Consensus 266 ~l~~li~~cl~~dP~~Rps~~~i~~~L~ 293 (303)
T 3gxj_A 266 VMAKIMRECWYANGAARLTALRIKKTLS 293 (303)
T ss_dssp HHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence 3445555699999999999999999987
No 185
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=83.22 E-value=1.5 Score=33.62 Aligned_cols=29 Identities=21% Similarity=0.446 Sum_probs=23.7
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |...+|.+||++.+++++|+
T Consensus 241 ~~l~~li~~---~l~~~p~~Rps~~~l~~~L~ 269 (278)
T 1byg_A 241 PAVYEVMKN---CWHLDAAMRPSFLQLREQLE 269 (278)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HhcCChhhCCCHHHHHHHHH
Confidence 455555554 99999999999999999986
No 186
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=82.97 E-value=1 Score=36.06 Aligned_cols=29 Identities=24% Similarity=0.495 Sum_probs=23.2
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++. .|+..+|.+||++.+|+++|+
T Consensus 323 ~~l~~li~---~~l~~dP~~Rps~~ell~~L~ 351 (359)
T 3vhe_A 323 PEMYQTML---DCWHGEPSQRPTFSELVEHLG 351 (359)
T ss_dssp HHHHHHHH---HHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHH---HHccCChhhCCCHHHHHHHHH
Confidence 34444444 499999999999999999986
No 187
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=82.88 E-value=0.63 Score=36.24 Aligned_cols=26 Identities=19% Similarity=0.339 Sum_probs=21.9
Q ss_pred HHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 188 MGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 188 ~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+-..|...+|.+||++.+|+++|+
T Consensus 273 ~~li~~cl~~dP~~Rps~~~i~~~L~ 298 (301)
T 3q4u_A 273 AKLMKECWYQNPSARLTALRIKKTLT 298 (301)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHhhcChhhCCCHHHHHHHHh
Confidence 34444599999999999999999986
No 188
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=82.75 E-value=1.2 Score=35.08 Aligned_cols=29 Identities=24% Similarity=0.543 Sum_probs=23.4
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |...+|.+||++.+|+++|+
T Consensus 266 ~~l~~li~~---~l~~dP~~Rps~~~ll~~L~ 294 (309)
T 3p86_A 266 PQVAAIIEG---CWTNEPWKRPSFATIMDLLR 294 (309)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HccCChhhCcCHHHHHHHHH
Confidence 444555554 99999999999999999886
No 189
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=82.36 E-value=1.5 Score=34.00 Aligned_cols=29 Identities=24% Similarity=0.610 Sum_probs=23.6
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+++++|+
T Consensus 255 ~~l~~li~~---~l~~~p~~Rps~~~ll~~l~ 283 (298)
T 3pls_A 255 DSLYQVMQQ---CWEADPAVRPTFRVLVGEVE 283 (298)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HccCChhhCcCHHHHHHHHH
Confidence 445555554 99999999999999999986
No 190
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=82.31 E-value=1.7 Score=34.24 Aligned_cols=29 Identities=24% Similarity=0.566 Sum_probs=23.3
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+++++|+
T Consensus 266 ~~l~~li~~---~l~~dp~~Rps~~~l~~~l~ 294 (323)
T 3qup_A 266 EEVYDLMYQ---CWSADPKQRPSFTCLRMELE 294 (323)
T ss_dssp HHHHHHHHH---TTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HccCChhhCcCHHHHHHHHH
Confidence 444555544 99999999999999999886
No 191
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=82.19 E-value=1.7 Score=34.00 Aligned_cols=29 Identities=34% Similarity=0.657 Sum_probs=23.7
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+++++|+
T Consensus 276 ~~l~~li~~---~l~~dp~~Rps~~~l~~~L~ 304 (313)
T 3brb_A 276 DELYEIMYS---CWRTDPLDRPTFSVLRLQLE 304 (313)
T ss_dssp HHHHHHHHH---TTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcCCChhhCcCHHHHHHHHH
Confidence 445555554 99999999999999999986
No 192
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=82.09 E-value=1.6 Score=33.73 Aligned_cols=29 Identities=28% Similarity=0.410 Sum_probs=23.7
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |...+|.+||++.+|++.|+
T Consensus 240 ~~l~~li~~---~l~~~p~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 240 PELYALMSD---CWIYKWEDRPDFLTVEQRMR 268 (287)
T ss_dssp HHHHHHHHH---TTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcCCChhhCcCHHHHHHHHH
Confidence 455555554 99999999999999999885
No 193
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=81.98 E-value=1.5 Score=33.46 Aligned_cols=29 Identities=31% Similarity=0.591 Sum_probs=23.2
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |...+|.+||++.+++++|+
T Consensus 234 ~~~~~li~~---~l~~~p~~Rps~~~ll~~l~ 262 (269)
T 4hcu_A 234 THVYQIMNH---CWRERPEDRPAFSRLLRQLA 262 (269)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HccCCcccCcCHHHHHHHHH
Confidence 444444444 99999999999999999986
No 194
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=81.57 E-value=1 Score=35.04 Aligned_cols=29 Identities=21% Similarity=0.517 Sum_probs=23.7
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |...+|.+||++.+|+++|+
T Consensus 259 ~~l~~li~~---~l~~dp~~Rps~~el~~~L~ 287 (295)
T 3ugc_A 259 DEIYMIMTE---CWNNNVNQRPSFRDLALRVD 287 (295)
T ss_dssp HHHHHHHHH---HSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcCCChhhCCCHHHHHHHHH
Confidence 445555554 99999999999999999986
No 195
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=80.58 E-value=1.2 Score=34.35 Aligned_cols=30 Identities=20% Similarity=0.527 Sum_probs=24.2
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhcC
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQI 214 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~~ 214 (214)
..+.+++.. |...+|.+||++.+|+++|+.
T Consensus 257 ~~l~~li~~---~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 257 PRLRNVIEL---CWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHHT
T ss_pred HHHHHHHHH---HhcCChhhCcCHHHHHHHHHh
Confidence 444555555 999999999999999999873
No 196
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=80.39 E-value=1.9 Score=33.09 Aligned_cols=29 Identities=34% Similarity=0.676 Sum_probs=23.4
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+++++|+
T Consensus 237 ~~l~~li~~---~l~~~p~~Rps~~~l~~~l~ 265 (279)
T 1qpc_A 237 EELYQLMRL---CWKERPEDRPTFDYLRSVLE 265 (279)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HhccChhhCCCHHHHHHHHH
Confidence 444555544 99999999999999999885
No 197
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=80.36 E-value=2.1 Score=33.97 Aligned_cols=25 Identities=16% Similarity=0.292 Sum_probs=21.1
Q ss_pred HHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 189 GVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 189 ~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
.+...|...+|.+||+|.+|+++|+
T Consensus 250 ~li~~~l~~~p~~Rps~~ell~~l~ 274 (327)
T 3poz_A 250 MIMVKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp HHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred HHHHHHcCCChhhCCCHHHHHHHHH
Confidence 3444599999999999999999875
No 198
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=80.27 E-value=2.1 Score=33.41 Aligned_cols=29 Identities=28% Similarity=0.613 Sum_probs=23.5
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+|+++|+
T Consensus 279 ~~~~~li~~---~l~~dp~~Rps~~~l~~~l~ 307 (314)
T 2ivs_A 279 EEMYRLMLQ---CWKQEPDKRPVFADISKDLE 307 (314)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HccCChhhCcCHHHHHHHHH
Confidence 445555544 99999999999999999886
No 199
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=80.25 E-value=1.2 Score=35.35 Aligned_cols=29 Identities=17% Similarity=0.313 Sum_probs=23.3
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++. .|+..+|.+||++++|+++|+
T Consensus 286 ~~l~~li~---~cl~~dP~~Rps~~e~l~~L~ 314 (336)
T 3g2f_A 286 RSLKETIE---DCWDQDAEARLTAQXAEERMA 314 (336)
T ss_dssp HHHHHHHH---HHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHH---HHhcCChhhCcchHHHHHHHH
Confidence 34444444 499999999999999999886
No 200
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=80.23 E-value=1.2 Score=34.73 Aligned_cols=29 Identities=28% Similarity=0.685 Sum_probs=23.5
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+|+++|+
T Consensus 275 ~~l~~li~~---~l~~dp~~Rps~~ell~~L~ 303 (313)
T 1t46_A 275 AEMYDIMKT---CWDADPLKRPTFKQIVQLIE 303 (313)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcCCCchhCcCHHHHHHHHH
Confidence 444455444 99999999999999999986
No 201
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=80.14 E-value=1.1 Score=35.61 Aligned_cols=27 Identities=11% Similarity=0.258 Sum_probs=22.4
Q ss_pred HHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 187 IMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 187 l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
+..+-..|...+|.+||++.+|+++|+
T Consensus 288 l~~li~~cl~~dP~~Rps~~ell~~L~ 314 (322)
T 3soc_A 288 LCETIEECWDHDAEARLSAGCVGERIT 314 (322)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 344444599999999999999999986
No 202
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=79.95 E-value=2.1 Score=32.89 Aligned_cols=29 Identities=31% Similarity=0.519 Sum_probs=23.0
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.++++.|+
T Consensus 248 ~~l~~li~~---~l~~~p~~Rps~~~ll~~L~ 276 (283)
T 3gen_A 248 EKVYTIMYS---CWHEKADERPTFKILLSNIL 276 (283)
T ss_dssp HHHHHHHHH---TTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HccCChhHCcCHHHHHHHHH
Confidence 444444444 99999999999999999885
No 203
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=79.68 E-value=1.9 Score=35.09 Aligned_cols=29 Identities=31% Similarity=0.605 Sum_probs=23.5
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |...+|.+||++.+|+++|+
T Consensus 342 ~~l~~li~~---cl~~dP~~Rps~~~i~~~L~ 370 (377)
T 3cbl_A 342 DAVFRLMEQ---CWAYEPGQRPSFSTIYQELQ 370 (377)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcCCCchhCcCHHHHHHHHH
Confidence 444555544 99999999999999999986
No 204
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=79.35 E-value=1.9 Score=35.08 Aligned_cols=29 Identities=28% Similarity=0.586 Sum_probs=23.3
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+|+++|+
T Consensus 320 ~~l~~li~~---~l~~dP~~Rps~~ell~~L~ 348 (382)
T 3tt0_A 320 NELYMMMRD---CWHAVPSQRPTFKQLVEDLD 348 (382)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcCCChhhCcCHHHHHHHHH
Confidence 444444444 99999999999999999986
No 205
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=79.34 E-value=1.3 Score=34.99 Aligned_cols=29 Identities=21% Similarity=0.417 Sum_probs=23.7
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+++++|+
T Consensus 278 ~~l~~li~~---~l~~dP~~Rps~~ell~~L~ 306 (318)
T 3lxp_A 278 AEVYHLMKN---CWETEASFRPTFENLIPILK 306 (318)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcCCCcccCcCHHHHHHHHH
Confidence 445555554 99999999999999999886
No 206
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=78.92 E-value=1.4 Score=34.68 Aligned_cols=30 Identities=20% Similarity=0.533 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 181 QEKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 181 ~~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
+..+.+++.. |+..+|.+||++.+|++.|+
T Consensus 266 ~~~l~~li~~---~l~~dp~~Rps~~e~l~~L~ 295 (322)
T 1p4o_A 266 PDMLFELMRM---CWQYNPKMRPSFLEIISSIK 295 (322)
T ss_dssp CHHHHHHHHH---HTCSSGGGSCCHHHHHHHHG
T ss_pred CHHHHHHHHH---HcCCCcccCcCHHHHHHHHH
Confidence 3445555554 99999999999999999986
No 207
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=78.89 E-value=1.5 Score=34.08 Aligned_cols=29 Identities=17% Similarity=0.468 Sum_probs=23.9
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+|+++|+
T Consensus 270 ~~l~~li~~---~l~~dp~~Rps~~~ll~~L~ 298 (302)
T 4e5w_A 270 DEVYQLMRK---CWEFQPSNRTSFQNLIEGFE 298 (302)
T ss_dssp HHHHHHHHH---TTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcCCCCCCCCCHHHHHHHHH
Confidence 445555555 99999999999999999986
No 208
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=78.84 E-value=2.4 Score=33.64 Aligned_cols=29 Identities=21% Similarity=0.306 Sum_probs=23.2
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |...+|.+||++.+++++|+
T Consensus 246 ~~l~~li~~---~l~~dp~~Rps~~ell~~L~ 274 (327)
T 3lzb_A 246 IDVYMIMRK---CWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcCCChhHCcCHHHHHHHHH
Confidence 444445444 99999999999999999886
No 209
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=78.84 E-value=2.4 Score=32.64 Aligned_cols=29 Identities=24% Similarity=0.493 Sum_probs=23.4
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+|++.|+
T Consensus 252 ~~l~~li~~---~l~~~p~~Rps~~~l~~~l~ 280 (291)
T 1u46_A 252 QDIYNVMVQ---CWAHKPEDRPTFVALRDFLL 280 (291)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HccCCcccCcCHHHHHHHHH
Confidence 445555544 99999999999999999886
No 210
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=78.73 E-value=1.8 Score=33.81 Aligned_cols=29 Identities=24% Similarity=0.495 Sum_probs=23.0
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++. .|+..+|.+||++.+|++.|+
T Consensus 278 ~~l~~li~---~~l~~dp~~Rps~~ell~~L~ 306 (316)
T 2xir_A 278 PEMYQTML---DCWHGEPSQRPTFSELVEHLG 306 (316)
T ss_dssp HHHHHHHH---HHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHH---HHcCCChhhCcCHHHHHHHHH
Confidence 34444444 499999999999999999886
No 211
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=78.68 E-value=1.4 Score=34.87 Aligned_cols=29 Identities=28% Similarity=0.614 Sum_probs=23.6
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+|+++|+
T Consensus 271 ~~l~~li~~---~l~~dP~~Rps~~ell~~L~ 299 (327)
T 3lxl_A 271 AEVHELMKL---CWAPSPQDRPSFSALGPQLD 299 (327)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcCCChhhCcCHHHHHHHHH
Confidence 444555554 99999999999999999886
No 212
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=78.43 E-value=1.4 Score=34.81 Aligned_cols=29 Identities=21% Similarity=0.517 Sum_probs=23.5
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |...+|.+||++.+|+++|+
T Consensus 290 ~~l~~li~~---cl~~dP~~Rps~~el~~~L~ 318 (326)
T 2w1i_A 290 DEIYMIMTE---CWNNNVNQRPSFRDLALRVD 318 (326)
T ss_dssp HHHHHHHHH---HSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcCCChhhCcCHHHHHHHHH
Confidence 445555544 99999999999999999986
No 213
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=78.28 E-value=2.5 Score=34.30 Aligned_cols=29 Identities=28% Similarity=0.586 Sum_probs=23.5
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |...+|.+||++.++++.|+
T Consensus 332 ~~l~~li~~---~l~~dP~~Rpt~~ell~~L~ 360 (370)
T 2psq_A 332 NELYMMMRD---CWHAVPSQRPTFKQLVEDLD 360 (370)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcCCChhhCcCHHHHHHHHH
Confidence 444555544 99999999999999999986
No 214
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=77.91 E-value=1.6 Score=33.70 Aligned_cols=29 Identities=31% Similarity=0.533 Sum_probs=23.4
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+|+++|+
T Consensus 244 ~~l~~li~~---~l~~~p~~Rps~~~l~~~l~ 272 (281)
T 1mp8_A 244 PTLYSLMTK---CWAYDPSRRPRFTELKAQLS 272 (281)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HccCChhhCcCHHHHHHHHH
Confidence 444555544 99999999999999999986
No 215
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=77.87 E-value=1.8 Score=36.23 Aligned_cols=29 Identities=34% Similarity=0.623 Sum_probs=23.4
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++. .|...+|.+||++.+|+++|+
T Consensus 412 ~~l~~li~---~cl~~dp~~RPt~~~i~~~L~ 440 (454)
T 1qcf_A 412 EELYNIMM---RCWKNRPEERPTFEYIQSVLD 440 (454)
T ss_dssp HHHHHHHH---HHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHH---HHccCChhHCcCHHHHHHHHH
Confidence 44444444 499999999999999999986
No 216
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=77.65 E-value=2.2 Score=33.95 Aligned_cols=29 Identities=17% Similarity=0.426 Sum_probs=23.1
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++. .|...+|.+||++.+|+++|+
T Consensus 277 ~~l~~li~---~~l~~~p~~Rps~~~l~~~L~ 305 (333)
T 1mqb_A 277 SAIYQLMM---QCWQQERARRPKFADIVSILD 305 (333)
T ss_dssp HHHHHHHH---HHTCSSTTTSCCHHHHHHHHH
T ss_pred HHHHHHHH---HHcCCChhhCcCHHHHHHHHH
Confidence 44444444 499999999999999999886
No 217
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=77.63 E-value=2.4 Score=34.35 Aligned_cols=29 Identities=21% Similarity=0.527 Sum_probs=23.1
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |...+|.+||++.+|++.|+
T Consensus 313 ~~l~~li~~---~l~~dP~~Rps~~eil~~l~ 341 (367)
T 3l9p_A 313 GPVYRIMTQ---CWQHQPEDRPNFAIILERIE 341 (367)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcCCCHhHCcCHHHHHHHHH
Confidence 444444444 99999999999999999875
No 218
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=77.61 E-value=1.5 Score=34.82 Aligned_cols=27 Identities=15% Similarity=0.256 Sum_probs=22.3
Q ss_pred HHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 187 IMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 187 l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
+..+-..|...+|.+||++.+|+++|+
T Consensus 306 l~~li~~cl~~dp~~Rps~~~i~~~L~ 332 (342)
T 1b6c_B 306 MAKIMRECWYANGAARLTALRIKKTLS 332 (342)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 334444599999999999999999986
No 219
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=77.28 E-value=2.1 Score=33.85 Aligned_cols=29 Identities=38% Similarity=0.639 Sum_probs=23.2
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |...+|.+||++.+|+++|+
T Consensus 294 ~~l~~li~~---~l~~~p~~Rps~~~l~~~L~ 322 (333)
T 2i1m_A 294 KNIYSIMQA---CWALEPTHRPTFQQICSFLQ 322 (333)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HhccChhhCcCHHHHHHHHH
Confidence 444444444 99999999999999999886
No 220
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=77.13 E-value=2.6 Score=33.41 Aligned_cols=29 Identities=24% Similarity=0.422 Sum_probs=23.3
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+|++.|+
T Consensus 302 ~~l~~li~~---~l~~dp~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 302 EEIYIIMQS---CWAFDSRKRPSFPNLTSFLG 330 (344)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcCCCchhCcCHHHHHHHHH
Confidence 444455444 99999999999999999886
No 221
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=77.01 E-value=1.6 Score=34.51 Aligned_cols=27 Identities=26% Similarity=0.362 Sum_probs=22.3
Q ss_pred HHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 187 IMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 187 l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
+..+-..|+..+|.+||++.+|++.|+
T Consensus 301 l~~li~~~l~~dP~~Rps~~ell~~L~ 327 (337)
T 3mdy_A 301 MGKLMTECWAHNPASRLTALRVKKTLA 327 (337)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHhhhhChhhCCCHHHHHHHHH
Confidence 334444599999999999999999986
No 222
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=76.89 E-value=1.9 Score=33.24 Aligned_cols=29 Identities=10% Similarity=0.258 Sum_probs=23.1
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |...+|.+||++.+|+++|+
T Consensus 248 ~~l~~li~~---~l~~~p~~Rpt~~~l~~~l~ 276 (296)
T 4hgt_A 248 SEFATYLNF---CRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HHHHHHHHH---HHTSCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHH---HHhcCCCCCCCHHHHHHHHH
Confidence 344444444 99999999999999999886
No 223
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=76.79 E-value=2.5 Score=34.45 Aligned_cols=29 Identities=17% Similarity=0.421 Sum_probs=23.5
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |...+|.+||++.+|+++|+
T Consensus 323 ~~l~~li~~---cl~~dp~~RPs~~ell~~L~ 351 (373)
T 3c1x_A 323 DPLYEVMLK---CWHPKAEMRPSFSELVSRIS 351 (373)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcCCChhhCcCHHHHHHHHH
Confidence 445555544 99999999999999999886
No 224
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=76.68 E-value=2.7 Score=35.19 Aligned_cols=29 Identities=24% Similarity=0.494 Sum_probs=23.6
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |...+|.+||++.+++++|+
T Consensus 413 ~~l~~li~~---cl~~dp~~Rpt~~~l~~~L~ 441 (450)
T 1k9a_A 413 PAVYDVMKN---CWHLDAATRPTFLQLREQLE 441 (450)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcCCChhHCcCHHHHHHHHH
Confidence 445555554 99999999999999999886
No 225
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=75.89 E-value=3.8 Score=35.86 Aligned_cols=29 Identities=28% Similarity=0.436 Sum_probs=23.3
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++. .|...+|.+||++.+|+++|+
T Consensus 566 ~~l~~li~---~cl~~dP~~RPs~~~l~~~L~ 594 (613)
T 2ozo_A 566 PELYALMS---DCWIYKWEDRPDFLTVEQRMR 594 (613)
T ss_dssp HHHHHHHH---HTTCSSTTTSCCHHHHHHHHH
T ss_pred HHHHHHHH---HHcCCChhHCcCHHHHHHHHH
Confidence 44444444 499999999999999999886
No 226
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=75.71 E-value=2.1 Score=32.99 Aligned_cols=29 Identities=10% Similarity=0.213 Sum_probs=22.8
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++. .|...+|.+||++.+|+++|+
T Consensus 248 ~~l~~li~---~~l~~dp~~Rps~~~l~~~l~ 276 (296)
T 3uzp_A 248 SEFATYLN---FCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HHHHHHHH---HHHTSCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHH---HHHhcCcCcCCCHHHHHHHHH
Confidence 33444444 499999999999999999886
No 227
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=75.68 E-value=1.7 Score=33.32 Aligned_cols=29 Identities=21% Similarity=0.316 Sum_probs=22.7
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+|++.+.
T Consensus 242 ~~l~~li~~---~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 242 DELNEIITR---MLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHTSTT
T ss_pred HHHHHHHHH---HcCCCcccCCCHHHHHhChh
Confidence 445555554 99999999999999998654
No 228
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=75.09 E-value=4 Score=35.99 Aligned_cols=29 Identities=21% Similarity=0.484 Sum_probs=23.6
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |...+|.+||++.+|+++|+
T Consensus 599 ~~l~~li~~---cl~~dP~~RPs~~~l~~~L~ 627 (635)
T 4fl3_A 599 REMYDLMNL---CWTYDVENRPGFAAVELRLR 627 (635)
T ss_dssp HHHHHHHHH---HTCSSTTTSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcCCCHhHCcCHHHHHHHHH
Confidence 444555544 99999999999999999986
No 229
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=74.76 E-value=2.5 Score=33.75 Aligned_cols=29 Identities=10% Similarity=0.116 Sum_probs=23.4
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++. .|...+|.+||++.+|+++|+
T Consensus 296 ~~l~~li~---~~l~~dp~~Rps~~~l~~~L~ 324 (345)
T 2v62_A 296 CEIAQFLV---CAHSLAYDEKPNYQALKKILN 324 (345)
T ss_dssp HHHHHHHH---HHHTCCTTCCCCHHHHHHHHC
T ss_pred HHHHHHHH---HHhhcCcccCCCHHHHHHHHh
Confidence 34444544 499999999999999999987
No 230
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=74.38 E-value=2.3 Score=32.29 Aligned_cols=29 Identities=31% Similarity=0.602 Sum_probs=23.0
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++. .|...+|.+||++.+++++|+
T Consensus 232 ~~l~~li~---~~l~~~p~~Rps~~~ll~~L~ 260 (267)
T 3t9t_A 232 THVYQIMN---HCWRERPEDRPAFSRLLRQLA 260 (267)
T ss_dssp HHHHHHHH---HHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHH---HHccCChhhCcCHHHHHHHHH
Confidence 34444444 499999999999999999986
No 231
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=74.38 E-value=2.1 Score=32.89 Aligned_cols=29 Identities=24% Similarity=0.471 Sum_probs=23.2
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+|+++|+
T Consensus 241 ~~l~~li~~---~l~~~p~~Rps~~ell~~L~ 269 (281)
T 3cc6_A 241 PVLYTLMTR---CWDYDPSDRPRFTELVCSLS 269 (281)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HccCCchhCcCHHHHHHHHH
Confidence 444455444 99999999999999999886
No 232
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=74.23 E-value=3.4 Score=34.52 Aligned_cols=29 Identities=31% Similarity=0.565 Sum_probs=23.4
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |...+|.+||++.+|+++|+
T Consensus 408 ~~l~~li~~---cl~~dP~~Rpt~~~l~~~L~ 436 (452)
T 1fmk_A 408 ESLHDLMCQ---CWRKEPEERPTFEYLQAFLE 436 (452)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HccCChhhCcCHHHHHHHHH
Confidence 444555544 99999999999999999986
No 233
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=72.73 E-value=2.1 Score=32.95 Aligned_cols=29 Identities=28% Similarity=0.618 Sum_probs=23.5
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+|+++|+
T Consensus 239 ~~l~~li~~---~l~~dp~~Rps~~~~~~~l~ 267 (288)
T 3kfa_A 239 EKVYELMRA---CWQWNPSDRPSFAEIHQAFE 267 (288)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HhCCChhhCcCHHHHHHHHH
Confidence 445555554 99999999999999999875
No 234
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=72.45 E-value=1.7 Score=33.58 Aligned_cols=23 Identities=9% Similarity=-0.016 Sum_probs=20.1
Q ss_pred hhcccCCCCCCCCCHHHHHHHhc
Q 035742 191 AFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 191 ~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
-..|...+|.+||++.+|++.|+
T Consensus 257 i~~~l~~dp~~RP~~~~l~~~l~ 279 (298)
T 1csn_A 257 MHYARNLAFDATPDYDYLQGLFS 279 (298)
T ss_dssp HHHHHHCCTTCCCCHHHHHHHHH
T ss_pred HHHHhcCCcccCCCHHHHHHHHH
Confidence 33499999999999999999885
No 235
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=71.92 E-value=4.1 Score=32.98 Aligned_cols=29 Identities=14% Similarity=0.219 Sum_probs=22.4
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.++.+.|.
T Consensus 284 ~~~~~li~~---~L~~dP~~R~sa~el~~~l~ 312 (336)
T 4g3f_A 284 PLTAQAIQE---GLRKEPVHRASAMELRRKVG 312 (336)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HccCCHhHCcCHHHHHHHHH
Confidence 444555554 89999999999999987764
No 236
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=71.61 E-value=1.8 Score=35.30 Aligned_cols=25 Identities=16% Similarity=0.446 Sum_probs=21.3
Q ss_pred HHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 189 GVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 189 ~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
.+...|...+|.+||+|.+|+++|+
T Consensus 281 ~li~~cl~~dp~~RPs~~~i~~~L~ 305 (373)
T 2qol_A 281 QLMLDCWQKDRNNRPKFEQIVSILD 305 (373)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHhCcChhhCcCHHHHHHHHH
Confidence 3444599999999999999999986
No 237
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=70.71 E-value=2.2 Score=33.38 Aligned_cols=22 Identities=23% Similarity=0.389 Sum_probs=20.0
Q ss_pred hcccCCCCCCCCCHHHHHHHhc
Q 035742 192 FPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 192 l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..|...+|.+||++.+|+++|+
T Consensus 277 ~~~l~~~p~~Rpt~~~l~~~l~ 298 (319)
T 2y4i_B 277 LFCWAFEQEERPTFTKLMDMLE 298 (319)
T ss_dssp HHHHCSSTTTSCCHHHHHHHHT
T ss_pred HHHhcCChhhCcCHHHHHHHHH
Confidence 3499999999999999999987
No 238
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=69.99 E-value=3.4 Score=33.04 Aligned_cols=29 Identities=17% Similarity=0.287 Sum_probs=23.5
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+|+++|+
T Consensus 304 ~~l~~li~~---~l~~dp~~Rps~~~l~~~L~ 332 (352)
T 2jii_A 304 ETLQKYLKV---VMALTYEEKPPYAMLRNNLE 332 (352)
T ss_dssp HHHHHHHHH---HHTCCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHH---HHhCChhhCCCHHHHHHHHH
Confidence 445555554 99999999999999999986
No 239
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=69.28 E-value=3.3 Score=32.62 Aligned_cols=29 Identities=21% Similarity=0.527 Sum_probs=22.9
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+|++.|+
T Consensus 272 ~~l~~li~~---~l~~dp~~Rps~~~ll~~l~ 300 (327)
T 2yfx_A 272 GPVYRIMTQ---CWQHQPEDRPNFAIILERIE 300 (327)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HhcCChhhCcCHHHHHHHHH
Confidence 444444444 99999999999999999875
No 240
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=68.78 E-value=2.9 Score=32.70 Aligned_cols=29 Identities=21% Similarity=0.407 Sum_probs=23.6
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+|++.|+
T Consensus 274 ~~l~~li~~---~l~~dp~~Rps~~~ll~~L~ 302 (317)
T 2buj_A 274 SALWQLLNS---MMTVDPHQRPHIPLLLSQLE 302 (317)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HhhcChhhCCCHHHHHHHhh
Confidence 445555555 99999999999999999985
No 241
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=68.56 E-value=3.3 Score=32.77 Aligned_cols=29 Identities=28% Similarity=0.611 Sum_probs=22.9
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++. .|...+|.+||++.+|++.|+
T Consensus 286 ~~l~~li~---~~l~~dp~~Rps~~ell~~L~ 314 (334)
T 2pvf_A 286 NELYMMMR---DCWHAVPSQRPTFKQLVEDLD 314 (334)
T ss_dssp HHHHHHHH---HHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHH---HHccCChhhCcCHHHHHHHHH
Confidence 34444444 499999999999999999886
No 242
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=68.34 E-value=5.4 Score=30.70 Aligned_cols=26 Identities=19% Similarity=0.419 Sum_probs=20.1
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.+|++
T Consensus 253 ~~~~~li~~---~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 253 PQAVDLLKQ---MLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHHHHHHHH---HTCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHH---HccCChhhCcCHHHHhc
Confidence 444445444 99999999999999975
No 243
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=67.57 E-value=5.7 Score=34.04 Aligned_cols=29 Identities=31% Similarity=0.565 Sum_probs=23.6
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |...+|.+||++.+|+++|+
T Consensus 491 ~~l~~li~~---cl~~dP~~RPt~~~l~~~L~ 519 (535)
T 2h8h_A 491 ESLHDLMCQ---CWRKEPEERPTFEYLQAFLE 519 (535)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcCCChhHCcCHHHHHHHHH
Confidence 444555544 99999999999999999986
No 244
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=67.52 E-value=2 Score=33.56 Aligned_cols=22 Identities=23% Similarity=0.533 Sum_probs=19.7
Q ss_pred hcccCCCCCCCCCHHHHHHHhc
Q 035742 192 FPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 192 l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..|...+|.+||++.++++.|+
T Consensus 257 ~~~l~~dP~~Rps~~~l~~~L~ 278 (310)
T 3s95_A 257 VRCCDLDPEKRPSFVKLEHWLE 278 (310)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHccCChhhCcCHHHHHHHHH
Confidence 3499999999999999999886
No 245
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=67.31 E-value=3.4 Score=33.65 Aligned_cols=39 Identities=18% Similarity=0.375 Sum_probs=25.9
Q ss_pred cCCCCCCCcchhHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 169 LDPRLPTSSCSVQEKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 169 l~~~lp~~~~~~~~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
+.+..|+........+.+++.. |+..+|.+||++.++.+
T Consensus 238 ~~~~~~~~~~~~s~~~~~li~~---~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 238 ISGSFPPVSLHYSYDLRSLVSQ---LFKRNPRDRPSVNSILE 276 (350)
T ss_dssp HHTCCCCCCTTSCHHHHHHHHH---HTCSSGGGSCCHHHHHT
T ss_pred HcCCCCCCCccCCHHHHHHHHH---HccCChhHCcCHHHHhc
Confidence 3344443333334555666655 99999999999999864
No 246
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=66.92 E-value=4.3 Score=31.96 Aligned_cols=29 Identities=24% Similarity=0.589 Sum_probs=23.3
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.++++.|+
T Consensus 268 ~~l~~li~~---~l~~dp~~Rps~~ell~~L~ 296 (327)
T 1fvr_A 268 DEVYDLMRQ---CWREKPYERPSFAQILVSLN 296 (327)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HccCChhhCcCHHHHHHHHH
Confidence 444555554 99999999999999999875
No 247
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=66.86 E-value=3.9 Score=32.32 Aligned_cols=26 Identities=12% Similarity=0.314 Sum_probs=19.9
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++.+
T Consensus 257 ~~~~~li~~---~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 257 PEVKEIIEG---CIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHHHHHH---HSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHH---HccCChhHCcCHHHHhc
Confidence 344455544 99999999999999865
No 248
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=66.43 E-value=1.7 Score=19.59 Aligned_cols=11 Identities=27% Similarity=0.827 Sum_probs=8.0
Q ss_pred CCcCcccceee
Q 035742 32 KICPCAWFGIS 42 (214)
Q Consensus 32 ~~~~c~w~gv~ 42 (214)
..+.|.|.|..
T Consensus 4 adgacswrgle 14 (23)
T 3ox7_P 4 ADGACSWRGLE 14 (26)
T ss_pred cCcccccccch
Confidence 34589999864
No 249
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=66.17 E-value=2.8 Score=32.74 Aligned_cols=29 Identities=28% Similarity=0.576 Sum_probs=23.4
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+||++.+|+++|+
T Consensus 265 ~~l~~li~~---~l~~dp~~Rps~~~il~~l~ 293 (310)
T 2wqm_A 265 EELRQLVNM---CINPDPEKRPDVTYVYDVAK 293 (310)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHH---HcCCChhhCCCHHHHHHHHH
Confidence 444555444 99999999999999999886
No 250
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=63.88 E-value=6.1 Score=31.81 Aligned_cols=27 Identities=15% Similarity=0.103 Sum_probs=20.9
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 181 QEKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 181 ~~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
...+.+++.. |+..+|.+||++.++++
T Consensus 326 ~~~~~~li~~---~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 326 PDFVKTLIGR---FLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CHHHHHHHHH---HTCSSTTTCCCHHHHTT
T ss_pred CHHHHHHHHH---HcCCChhhCCCHHHHhc
Confidence 3555555555 99999999999999863
No 251
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=63.86 E-value=7.5 Score=30.86 Aligned_cols=25 Identities=20% Similarity=0.488 Sum_probs=19.3
Q ss_pred HHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 183 KLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 183 ~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
.+.+++.. |+..+|.+||++.++++
T Consensus 249 ~l~~li~~---~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 249 DLQDVLKC---CLKRDPKQRISIPELLA 273 (343)
T ss_dssp HHHHHHHH---HTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHH---HcCCChhHCCCHHHHHh
Confidence 34444444 99999999999999874
No 252
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=63.37 E-value=4.4 Score=32.59 Aligned_cols=29 Identities=10% Similarity=0.106 Sum_probs=22.8
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |...+|.+||++.+|+++|+
T Consensus 297 ~~~~~li~~---cl~~~p~~RP~~~~l~~~l~ 325 (364)
T 3op5_A 297 GEIAKYMET---VKLLDYTEKPLYENLRDILL 325 (364)
T ss_dssp HHHHHHHHH---HHTCCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHH---HhcCCCCCCCCHHHHHHHHH
Confidence 344444444 99999999999999999875
No 253
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=63.06 E-value=2.4 Score=32.60 Aligned_cols=21 Identities=24% Similarity=0.691 Sum_probs=19.5
Q ss_pred cccCCCCCCCCCHHHHHHHhc
Q 035742 193 PCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 193 ~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
.|+..+|.+||++.++++.|+
T Consensus 251 ~~l~~dp~~Rps~~~ll~~l~ 271 (289)
T 4fvq_A 251 NCMDYEPDHRPSFRAIIRDLN 271 (289)
T ss_dssp HHSCSSGGGSCCHHHHHHHHH
T ss_pred HHcCCChhHCcCHHHHHHHHH
Confidence 499999999999999999986
No 254
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=62.57 E-value=4.6 Score=30.76 Aligned_cols=28 Identities=21% Similarity=0.387 Sum_probs=22.3
Q ss_pred HHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 183 KLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 183 ~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
.+.+++.. |+..+|.+||++.++++.|+
T Consensus 243 ~~~~li~~---~l~~dp~~Rps~~e~l~~l~ 270 (284)
T 2a19_B 243 KEKTLLQK---LLSKKPEDRPNTSEILRTLT 270 (284)
T ss_dssp HHHHHHHH---HTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHH---HccCChhhCcCHHHHHHHHH
Confidence 34444444 99999999999999999875
No 255
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=61.63 E-value=4.5 Score=30.81 Aligned_cols=27 Identities=15% Similarity=0.448 Sum_probs=21.0
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 181 QEKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 181 ~~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
...+.+++.. |+..+|.+||++.++++
T Consensus 253 ~~~~~~li~~---~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 253 SQEFTELLKV---MIHPDPERRPSAMALVK 279 (289)
T ss_dssp CHHHHHHHHH---HTCSSGGGSCCHHHHHT
T ss_pred CHHHHHHHHH---HhCCCcccCCCHHHHhh
Confidence 3455555555 99999999999999875
No 256
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=60.83 E-value=4 Score=34.65 Aligned_cols=29 Identities=28% Similarity=0.620 Sum_probs=23.2
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++. .|...+|.+||++.+|+++|+
T Consensus 446 ~~l~~li~---~cl~~dP~~RPs~~el~~~L~ 474 (495)
T 1opk_A 446 EKVYELMR---ACWQWNPSDRPSFAEIHQAFE 474 (495)
T ss_dssp HHHHHHHH---HHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHH---HHcCcChhHCcCHHHHHHHHH
Confidence 44444444 499999999999999999986
No 257
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=60.43 E-value=3.2 Score=32.73 Aligned_cols=22 Identities=18% Similarity=0.403 Sum_probs=19.7
Q ss_pred hcccCCCCCCCCCHHHHHHHhc
Q 035742 192 FPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 192 l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..|...+|.+||++.+|+++|+
T Consensus 251 ~~~l~~dp~~Rps~~el~~~l~ 272 (325)
T 3kex_A 251 VKCWMIDENIRPTFKELANEFT 272 (325)
T ss_dssp HHHTCSCTTTSCCHHHHHHHHH
T ss_pred HHHcCCChhhCcCHHHHHHHHH
Confidence 3499999999999999999885
No 258
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=60.09 E-value=9.4 Score=31.10 Aligned_cols=26 Identities=19% Similarity=0.445 Sum_probs=19.8
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++. .|+..+|.+||++.+|++
T Consensus 295 ~~~~~li~---~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 295 KDLQDVLK---CCLKRDPKQRISIPELLA 320 (390)
T ss_dssp HHHHHHHH---HHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHH---HHcccChhhCCCHHHHhh
Confidence 33444444 499999999999999975
No 259
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=59.12 E-value=10 Score=29.39 Aligned_cols=26 Identities=19% Similarity=0.484 Sum_probs=20.1
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 267 ~~l~~li~~---~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 267 KDLQDVLKC---CLKRDPKQRISIPELLA 292 (313)
T ss_dssp HHHHHHHHH---HTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHH---HccCCcccCcCHHHHhc
Confidence 444445444 99999999999999875
No 260
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=56.79 E-value=6.4 Score=33.40 Aligned_cols=26 Identities=8% Similarity=0.102 Sum_probs=21.4
Q ss_pred HHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 188 MGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 188 ~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+-..|...+|.+||++.+|+++|+
T Consensus 249 ~~li~~cl~~dP~~RPs~~el~~~L~ 274 (483)
T 3sv0_A 249 ASYFHYCRSLRFDDKPDYSYLKRLFR 274 (483)
T ss_dssp HHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 33344499999999999999999875
No 261
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=55.89 E-value=15 Score=27.86 Aligned_cols=26 Identities=23% Similarity=0.429 Sum_probs=19.9
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 232 ~~~~~li~~---~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 232 EGARDLISR---LLKHNPSQRPMLREVLE 257 (279)
T ss_dssp HHHHHHHHH---HCCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHH---HhccChhhCCCHHHHhh
Confidence 334444444 99999999999999985
No 262
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=55.60 E-value=15 Score=23.88 Aligned_cols=46 Identities=9% Similarity=0.048 Sum_probs=27.7
Q ss_pred CCccccCccccCCCCCCcEEeCcCCcCcCCChhhhhCCcccceeeccc
Q 035742 58 GLSGTLSDFSFSSFPQLVHLDLSLNGFLGTIPSQIGNLSKLSYISLQS 105 (214)
Q Consensus 58 ~l~g~~p~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ls~ 105 (214)
.++ .|.+..|.++++|+.+.+..+ ++..-...|.++.+|+.+.+..
T Consensus 7 ~vt-~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVV-GMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCC-SSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccC-EecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344 444466777777777777654 3323445567777777776543
No 263
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=54.16 E-value=5.8 Score=31.04 Aligned_cols=21 Identities=33% Similarity=0.447 Sum_probs=19.2
Q ss_pred cccCCCCCCCCCHHHHHHHhc
Q 035742 193 PCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 193 ~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
.|+..+|.+||++.+|++.|+
T Consensus 284 ~~l~~~p~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 284 AMLQVNPEERLSIAEVVHQLQ 304 (337)
T ss_dssp HHSCSSGGGSCCHHHHHHHHH
T ss_pred HHccCChhhCcCHHHHHHHHH
Confidence 389999999999999999875
No 264
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=53.86 E-value=9 Score=29.37 Aligned_cols=25 Identities=12% Similarity=0.356 Sum_probs=19.5
Q ss_pred HHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 183 KLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 183 ~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
.+.+++. .|+..+|.+||++.+|++
T Consensus 258 ~l~~li~---~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 258 EVKEIIE---GCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHHHH---HHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHH---HHccCChhhCCCHHHHhh
Confidence 3444444 499999999999999975
No 265
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=51.83 E-value=11 Score=28.70 Aligned_cols=26 Identities=23% Similarity=0.524 Sum_probs=20.1
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 241 ~~~~~li~~---~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 241 AEFVDFTSQ---CLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHH---HhhcChhhCcCHHHHHh
Confidence 444555544 99999999999999865
No 266
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=50.78 E-value=8.2 Score=34.09 Aligned_cols=29 Identities=31% Similarity=0.545 Sum_probs=23.0
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++. .|...+|.+||++.+|+++|+
T Consensus 619 ~~l~~li~---~~l~~dP~~RPs~~el~~~L~ 647 (656)
T 2j0j_A 619 PTLYSLMT---KCWAYDPSRRPRFTELKAQLS 647 (656)
T ss_dssp HHHHHHHH---HHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHH---HHcCCChhHCcCHHHHHHHHH
Confidence 34444444 499999999999999999886
No 267
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=49.13 E-value=23 Score=27.56 Aligned_cols=26 Identities=15% Similarity=0.261 Sum_probs=20.2
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++.+
T Consensus 237 ~~~~~li~~---~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 237 PGAAGLIKR---MLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHHHHHHHH---HSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHH---HccCChhHCcCHHHHHc
Confidence 444555554 89999999999999875
No 268
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=48.39 E-value=11 Score=28.81 Aligned_cols=26 Identities=19% Similarity=0.345 Sum_probs=20.4
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 258 ~~~~~li~~---~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 258 KVEKKIIRL---LIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHH---HHhcCcccCcCHHHHhC
Confidence 344455554 99999999999999986
No 269
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=46.83 E-value=14 Score=28.11 Aligned_cols=26 Identities=12% Similarity=0.236 Sum_probs=19.9
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 253 ~~~~~li~~---~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 253 AEAKAFILK---CFEPDPDKRACANDLLV 278 (295)
T ss_dssp HHHHHHHHH---TTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHH---HccCChhhCCCHHHHhc
Confidence 444444444 99999999999999875
No 270
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=46.70 E-value=9.5 Score=29.99 Aligned_cols=23 Identities=4% Similarity=-0.035 Sum_probs=19.8
Q ss_pred hhcccCCCCCCCCCHHHHHHHhc
Q 035742 191 AFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 191 ~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
-..|...+|.+||++.+|.+.|+
T Consensus 255 i~~~l~~~p~~RP~~~~l~~~l~ 277 (330)
T 2izr_A 255 LRYVRRLDFFEKPDYDYLRKLFT 277 (330)
T ss_dssp HHHHHHCCTTCCCCHHHHHHHHH
T ss_pred HHHHHhCCCCCCCCHHHHHHHHH
Confidence 33489999999999999999875
No 271
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=44.21 E-value=12 Score=28.36 Aligned_cols=26 Identities=19% Similarity=0.218 Sum_probs=20.3
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 236 ~~~~~li~~---~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 236 PEAKSLIDS---MLTVNPKKRITADQALK 261 (284)
T ss_dssp HHHHHHHHH---HSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHH---HcccChhhCCCHHHHhc
Confidence 445555554 99999999999999865
No 272
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=43.96 E-value=16 Score=28.44 Aligned_cols=26 Identities=23% Similarity=0.281 Sum_probs=20.0
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++. .|+..+|.+||++.++++
T Consensus 279 ~~l~~li~---~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 279 SELRSVLV---MMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HHHHHHHH---HHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHH---HHcCCChhhCcCHHHHHh
Confidence 34444444 499999999999999976
No 273
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=43.91 E-value=19 Score=28.25 Aligned_cols=26 Identities=19% Similarity=0.322 Sum_probs=20.4
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 297 ~~l~~li~~---~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 297 NEDIDFLKL---FLRKNPAERITSEDALK 322 (348)
T ss_dssp HHHHHHHHH---HCCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHH---HccCChhhCCCHHHHhc
Confidence 444555554 99999999999999875
No 274
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=43.73 E-value=14 Score=28.66 Aligned_cols=26 Identities=23% Similarity=0.429 Sum_probs=19.8
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++. .|+..+|.+||++.+|++
T Consensus 303 ~~l~~li~---~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 303 ERLFDLIQ---KMLEYDPAKRITLREALK 328 (339)
T ss_dssp HHHHHHHH---HHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHH---HHhCcCcccccCHHHHhc
Confidence 44444444 499999999999999864
No 275
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=42.53 E-value=7.3 Score=30.36 Aligned_cols=19 Identities=26% Similarity=0.434 Sum_probs=16.9
Q ss_pred hcccCCCCCCCCCHHHHHH
Q 035742 192 FPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 192 l~C~~~~p~~Rp~m~~V~~ 210 (214)
..|+..+|.+||++.++++
T Consensus 307 ~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 307 QDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHCSSGGGSCCHHHHHH
T ss_pred HHHccCCCCcCCCHHHHhh
Confidence 3499999999999999986
No 276
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=42.40 E-value=13 Score=28.64 Aligned_cols=21 Identities=24% Similarity=0.403 Sum_probs=17.4
Q ss_pred HhhcccCCCCCCCCCHHHHHH
Q 035742 190 VAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 190 ~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
.-..|+..+|.+||++.++++
T Consensus 264 li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 264 LLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp HHHHHCCSSTTTSCCHHHHHT
T ss_pred HHHHHccCChhhcCCHHHHhc
Confidence 333499999999999999874
No 277
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=41.93 E-value=22 Score=27.46 Aligned_cols=26 Identities=15% Similarity=0.064 Sum_probs=19.9
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 270 ~~~~~li~~---~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 270 CAAKDLISK---LLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHH---HSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHH---HhhCChhhCCCHHHHhc
Confidence 334444444 99999999999999976
No 278
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=41.90 E-value=17 Score=28.78 Aligned_cols=22 Identities=18% Similarity=0.224 Sum_probs=18.2
Q ss_pred HHhhcccCCCCCCCCCHHHHHH
Q 035742 189 GVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 189 ~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
.+-..|+..+|.+||++.+|++
T Consensus 312 ~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 312 DFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp HHHGGGGCSSTTTCBCHHHHHT
T ss_pred HHHHHHhccCccccCCHHHHhh
Confidence 4444599999999999999875
No 279
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=41.04 E-value=25 Score=28.42 Aligned_cols=31 Identities=10% Similarity=0.032 Sum_probs=23.4
Q ss_pred hHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 180 VQEKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 180 ~~~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
....+.+++.. |+..+|.+||++.++.++++
T Consensus 275 ~~~~l~~ll~~---~L~~dP~~R~s~~e~l~~l~ 305 (396)
T 4eut_A 275 LQVLLTPVLAN---ILEADQEKCWGFDQFFAETS 305 (396)
T ss_dssp HHHHHHHHHHH---HSCCCTTTSCCHHHHHHHHH
T ss_pred HHhhchHHHHH---hhccChhhhccHHHHHHHHH
Confidence 34444455444 99999999999999988764
No 280
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=40.82 E-value=12 Score=28.71 Aligned_cols=26 Identities=23% Similarity=0.602 Sum_probs=20.0
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 262 ~~~~~li~~---~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 262 KSFRKMISL---CLQKDPEKRPTAAELLR 287 (303)
T ss_dssp HHHHHHHHH---HCCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHH---HccCChhhCcCHHHHhh
Confidence 344444444 99999999999999975
No 281
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=40.49 E-value=36 Score=26.12 Aligned_cols=19 Identities=21% Similarity=0.153 Sum_probs=16.5
Q ss_pred hcccCCCCCCCCCHHHHHH
Q 035742 192 FPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 192 l~C~~~~p~~Rp~m~~V~~ 210 (214)
..|+..+|.+||++.++++
T Consensus 278 ~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 278 LEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHHTCSSTTTSCCHHHHHT
T ss_pred HHHhcCCCccCCCHHHHhc
Confidence 3499999999999999875
No 282
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=40.43 E-value=19 Score=28.16 Aligned_cols=26 Identities=23% Similarity=0.245 Sum_probs=20.2
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.+|++
T Consensus 269 ~~l~~li~~---~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 269 PVLRDFLER---MLVRDPQERATAQELLD 294 (321)
T ss_dssp HHHHHHHHH---HSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHH---HccCChhhCcCHHHHhc
Confidence 444455444 99999999999999975
No 283
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=40.25 E-value=20 Score=27.64 Aligned_cols=26 Identities=19% Similarity=0.296 Sum_probs=20.4
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 231 ~~~~~li~~---~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 231 EEVKMLIRN---LLKTEPTQRMTITEFMN 256 (299)
T ss_dssp HHHHHHHHH---HTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHH---HcccChhhCCCHHHHhc
Confidence 445555554 99999999999999875
No 284
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=39.94 E-value=16 Score=28.86 Aligned_cols=26 Identities=19% Similarity=0.327 Sum_probs=20.7
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 262 ~~~~~li~~---~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 262 EDAKQLIRL---LLKTDPTERLTITQFMN 287 (336)
T ss_dssp HHHHHHHHH---HSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHH---HCCCChhHCcCHHHHhc
Confidence 445555555 99999999999999986
No 285
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=39.88 E-value=13 Score=28.70 Aligned_cols=26 Identities=31% Similarity=0.588 Sum_probs=20.0
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 245 ~~l~~li~~---~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 245 KPLKEFVEA---CLNKEPSFRPTAKELLK 270 (303)
T ss_dssp HHHHHHHHH---HCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHH---HcCCChhhCcCHHHHhh
Confidence 444444444 99999999999999875
No 286
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=39.66 E-value=25 Score=26.92 Aligned_cols=26 Identities=19% Similarity=0.310 Sum_probs=19.9
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 238 ~~l~~li~~---~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 238 PPLSDLLKG---MLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp HHHHHHHHH---HTCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHH---HccCChhhCCCHHHHhc
Confidence 334444444 99999999999999986
No 287
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=39.52 E-value=27 Score=22.58 Aligned_cols=48 Identities=17% Similarity=0.000 Sum_probs=35.6
Q ss_pred CcCcCCChhhhhCCcccceeeccccccccCCCccccccccchhhhcccc
Q 035742 82 NGFLGTIPSQIGNLSKLSYISLQSNQLSGKIPLEVGLLTHLKVLHFQFN 130 (214)
Q Consensus 82 n~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N 130 (214)
..++..-...|.++.+|+.+.+..+- +..-...|.++.+|+.+.+...
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~v-~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPNI-GLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTTS-SCCCTTSSTTCTTCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCCch-heEcHHHHhccCCccEEEEcCC
Confidence 34554455678899999999987653 3255667999999999988764
No 288
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=39.08 E-value=19 Score=28.25 Aligned_cols=22 Identities=18% Similarity=0.140 Sum_probs=17.6
Q ss_pred HHhhcccCCCCCCCCCHHHHHH
Q 035742 189 GVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 189 ~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
.+-..|+..+|.+||++.++++
T Consensus 312 ~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 312 DLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp HHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHhcCChhhCcCHHHHhc
Confidence 3333499999999999999864
No 289
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=38.88 E-value=24 Score=28.06 Aligned_cols=26 Identities=27% Similarity=0.542 Sum_probs=20.2
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 280 ~~l~~li~~---~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 280 EYFRNFVDS---CLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHH---HcccChhhCcCHHHHhh
Confidence 445555554 99999999999999864
No 290
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=38.77 E-value=14 Score=28.65 Aligned_cols=28 Identities=14% Similarity=0.211 Sum_probs=22.1
Q ss_pred HHHHHHHHhhcccCCCCCCCC-CHHHHHHHhc
Q 035742 183 KLISIMGVAFPCLNESPVSRP-TMQTVSQQLQ 213 (214)
Q Consensus 183 ~L~~l~~~~l~C~~~~p~~Rp-~m~~V~~~L~ 213 (214)
.+.+++.. |+..+|.+|| ++.++.+.|+
T Consensus 264 ~l~~li~~---~l~~dP~~Rp~s~~~l~~~l~ 292 (309)
T 2h34_A 264 AFDAVIAR---GMAKNPEDRYVTCGDLSAAAH 292 (309)
T ss_dssp HHHHHHHH---HTCSSGGGSCSSHHHHHHHHH
T ss_pred HHHHHHHH---hccCCHHHHHHhHHHHHHHHH
Confidence 34444444 9999999999 9999999875
No 291
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=38.57 E-value=8.6 Score=30.31 Aligned_cols=18 Identities=28% Similarity=0.510 Sum_probs=16.3
Q ss_pred cccCCCCCCCCCHHHHHH
Q 035742 193 PCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 193 ~C~~~~p~~Rp~m~~V~~ 210 (214)
.|+..+|.+||++.++++
T Consensus 262 ~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 262 DMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHTCSSGGGSCCHHHHHT
T ss_pred HHcCCChhHCcCHHHHhc
Confidence 499999999999999875
No 292
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=38.24 E-value=22 Score=27.58 Aligned_cols=19 Identities=16% Similarity=0.064 Sum_probs=16.6
Q ss_pred hcccCCCCCCCCCHHHHHH
Q 035742 192 FPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 192 l~C~~~~p~~Rp~m~~V~~ 210 (214)
..|+..+|.+||++.++++
T Consensus 282 ~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 282 SNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHSCSCTTTSCCHHHHHT
T ss_pred HHHcCCChhHCCCHHHHhc
Confidence 3499999999999999875
No 293
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=38.14 E-value=16 Score=29.16 Aligned_cols=24 Identities=21% Similarity=0.281 Sum_probs=19.2
Q ss_pred HHHHhhcccCCCCCCCCCHHHHHH
Q 035742 187 IMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 187 l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
+..+-..|+..+|.+||++.++++
T Consensus 368 ~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 368 FTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHhccChhhcCCHHHHhh
Confidence 334445599999999999999875
No 294
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=38.02 E-value=22 Score=27.08 Aligned_cols=26 Identities=23% Similarity=0.263 Sum_probs=20.2
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 255 ~~~~~li~~---~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 255 ESGIDLLSK---MLKLDPNQRITAKQALE 280 (288)
T ss_dssp HHHHHHHHH---HTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHH---HcCCCcccCCCHHHHhc
Confidence 444555555 99999999999999875
No 295
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=37.89 E-value=24 Score=28.00 Aligned_cols=26 Identities=19% Similarity=0.303 Sum_probs=19.6
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++.+
T Consensus 233 ~~~~~li~~---~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 233 PGAQSLIRR---MIVADPMQRITIQEIRR 258 (336)
T ss_dssp HHHHHHHHT---TSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHH---HcCCChhHCcCHHHHHh
Confidence 344444444 99999999999999864
No 296
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=37.29 E-value=19 Score=27.03 Aligned_cols=26 Identities=19% Similarity=0.365 Sum_probs=20.1
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 236 ~~~~~li~~---~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 236 SAPLALLHK---ILVENPSARITIPDIKK 261 (276)
T ss_dssp HHHHHHHHH---HSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHH---HCCCCchhCCCHHHHhc
Confidence 444455544 99999999999999865
No 297
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=37.26 E-value=19 Score=27.79 Aligned_cols=28 Identities=11% Similarity=0.106 Sum_probs=22.5
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+| ++.+++++|+
T Consensus 234 ~~l~~li~~---~l~~dP~~R-s~~el~~~L~ 261 (286)
T 3uqc_A 234 FQISAVAAR---SVQGDGGIR-SASTLLNLMQ 261 (286)
T ss_dssp HHHHHHHHH---HHCTTSSCC-CHHHHHHHHH
T ss_pred HHHHHHHHH---HcccCCccC-CHHHHHHHHH
Confidence 445555554 999999999 9999999986
No 298
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=36.88 E-value=30 Score=27.38 Aligned_cols=26 Identities=15% Similarity=0.401 Sum_probs=20.3
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 299 ~~~~~li~~---~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 299 LEFQDFVNK---CLIKNPAERADLKQLMV 324 (360)
T ss_dssp HHHHHHHHH---HHCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHH---HhhcChhhCCCHHHHhh
Confidence 445555554 99999999999999874
No 299
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=36.76 E-value=20 Score=27.40 Aligned_cols=26 Identities=15% Similarity=0.456 Sum_probs=19.7
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 250 ~~l~~li~~---~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 250 VEFRDFLKI---ALDKNPETRPSAAQLLE 275 (302)
T ss_dssp HHHHHHHHH---HSCSCTTTSCCHHHHTT
T ss_pred HHHHHHHHH---HcccChhhCCCHHHHhc
Confidence 344444444 99999999999999864
No 300
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=36.65 E-value=16 Score=27.56 Aligned_cols=19 Identities=21% Similarity=0.501 Sum_probs=16.8
Q ss_pred hcccCCCCCCCCCHHHHHH
Q 035742 192 FPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 192 l~C~~~~p~~Rp~m~~V~~ 210 (214)
..|+..+|.+||++.+|.+
T Consensus 243 ~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 243 MHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp HHHTCSSGGGSCCHHHHHH
T ss_pred HHHccCChhhCCCHHHHHh
Confidence 3499999999999999976
No 301
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=36.41 E-value=20 Score=27.41 Aligned_cols=26 Identities=19% Similarity=0.179 Sum_probs=20.1
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 257 ~~~~~li~~---~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 257 ATGRDLLQN---LLKCNPVQRISAEEALQ 282 (292)
T ss_dssp HHHHHHHHH---HSCSSGGGSCCHHHHHT
T ss_pred hHHHHHHHH---HhccChhhCCCHHHHhc
Confidence 444455554 99999999999999875
No 302
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=36.36 E-value=20 Score=28.34 Aligned_cols=26 Identities=12% Similarity=0.069 Sum_probs=20.1
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 289 ~~~~~li~~---~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 289 KEAYDLLSA---LLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHH---HhccCccccCCHHHHhc
Confidence 444555544 99999999999999864
No 303
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=36.21 E-value=14 Score=27.92 Aligned_cols=25 Identities=16% Similarity=0.278 Sum_probs=19.1
Q ss_pred HHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 183 KLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 183 ~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
.+.+++.. |+..+|.+||++.++++
T Consensus 238 ~~~~li~~---~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 238 GAAGLIKR---MLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHHHHHHH---HSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHH---HhhcCHhHCCCHHHHhh
Confidence 34444444 99999999999999864
No 304
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=35.90 E-value=21 Score=27.57 Aligned_cols=26 Identities=15% Similarity=0.248 Sum_probs=19.9
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 244 ~~~~~li~~---~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 244 AIFRDFLNR---CLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp HHHHHHHHH---HSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHH---HccCChhHCcCHHHHhh
Confidence 344444444 99999999999999875
No 305
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=35.55 E-value=32 Score=26.89 Aligned_cols=26 Identities=15% Similarity=0.014 Sum_probs=20.2
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 305 ~~~~~li~~---~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 305 PLARDLLSN---LLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHHHHH---HSCSCTTTSCCHHHHHH
T ss_pred HHHHHHHHH---HcCCChhHCCCHHHHhc
Confidence 444555554 99999999999999875
No 306
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=35.39 E-value=20 Score=27.10 Aligned_cols=22 Identities=18% Similarity=0.134 Sum_probs=18.1
Q ss_pred HHhhcccCCCCCCCCCHHHHHH
Q 035742 189 GVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 189 ~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..-..|+..+|.+||++.++++
T Consensus 244 ~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 244 DFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHccCCHhHCcCHHHHHh
Confidence 3344599999999999999976
No 307
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=35.29 E-value=23 Score=28.43 Aligned_cols=23 Identities=17% Similarity=0.119 Sum_probs=18.2
Q ss_pred HHHhhcccCCCCCCCCCHHHHHH
Q 035742 188 MGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 188 ~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+-..|+..+|.+||++.++++
T Consensus 350 ~dli~~mL~~dP~~Rpta~e~L~ 372 (382)
T 2vx3_A 350 KDLILRMLDYDPKTRIQPYYALQ 372 (382)
T ss_dssp HHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHhcCCChhhCCCHHHHhc
Confidence 34444599999999999999864
No 308
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=35.23 E-value=22 Score=27.25 Aligned_cols=26 Identities=23% Similarity=0.373 Sum_probs=20.0
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++.+
T Consensus 267 ~~l~~li~~---~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 267 EDLKDLITR---MLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHHHH---HTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHHH---HhhcChhhCCCHHHHhc
Confidence 444555554 99999999999999864
No 309
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=35.21 E-value=15 Score=29.17 Aligned_cols=22 Identities=18% Similarity=0.360 Sum_probs=17.9
Q ss_pred HHhhcccCCCCCCCCCHHHHHH
Q 035742 189 GVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 189 ~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
.+-..|+..+|.+||++.++++
T Consensus 334 ~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 334 DFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHhcCChhhCCCHHHHhc
Confidence 3444599999999999999864
No 310
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=35.12 E-value=25 Score=27.10 Aligned_cols=26 Identities=23% Similarity=0.553 Sum_probs=20.0
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++. .|+..+|.+||++.++++
T Consensus 258 ~~~~~li~---~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 258 PDCCALIR---RCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp HHHHHHHH---HHTCSSTTTSCCHHHHHH
T ss_pred HHHHHHHH---HHccCChhhCcCHHHHhc
Confidence 33444444 499999999999999986
No 311
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=34.75 E-value=19 Score=28.17 Aligned_cols=26 Identities=23% Similarity=0.493 Sum_probs=20.0
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++. .|+..+|.+||++.+|++
T Consensus 268 ~~~~~li~---~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 268 SECQHLIR---WCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp HHHHHHHH---HHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHH---HHccCChhhCcCHHHHhc
Confidence 34444444 499999999999999975
No 312
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=34.68 E-value=27 Score=26.59 Aligned_cols=26 Identities=19% Similarity=0.186 Sum_probs=19.9
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++.+
T Consensus 258 ~~~~~li~~---~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 258 EDGRSLLSQ---MLHYDPNKRISAKAALA 283 (299)
T ss_dssp HHHHHHHHH---HTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHH---hcCcCcccCCCHHHHhc
Confidence 344445544 99999999999999875
No 313
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=34.68 E-value=38 Score=26.15 Aligned_cols=30 Identities=10% Similarity=0.030 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHh
Q 035742 180 VQEKLISIMGVAFPCLNESPVSRPTMQTVSQQL 212 (214)
Q Consensus 180 ~~~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~L 212 (214)
....+.+++.. |+..+|.+||++.++.+..
T Consensus 275 ~~~~l~~ll~~---~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 275 LQVLLTPVLAN---ILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp HHHHHHHHHHH---HSCCCTTTSCCHHHHHHHH
T ss_pred HHHHhHHHHHH---hccCChhhhccHHHhhhcc
Confidence 33444445444 9999999999999998753
No 314
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=34.36 E-value=19 Score=27.86 Aligned_cols=26 Identities=19% Similarity=0.216 Sum_probs=20.2
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 271 ~~~~~li~~---~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 271 ELGKDLLLK---CLTFNPAKRISAYSALS 296 (326)
T ss_dssp HHHHHHHHH---HSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHH---HcCCCcccCCCHHHHhc
Confidence 444455554 99999999999999874
No 315
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=34.26 E-value=19 Score=27.67 Aligned_cols=26 Identities=19% Similarity=0.286 Sum_probs=19.9
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++. .|+..+|.+||++.++++
T Consensus 280 ~~~~~li~---~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 280 REAVDFLE---QILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHHHH---TTSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHH---HHcCCCccccCCHHHHhC
Confidence 34444444 499999999999999875
No 316
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=33.83 E-value=18 Score=27.85 Aligned_cols=26 Identities=19% Similarity=0.382 Sum_probs=20.0
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 258 ~~l~~li~~---~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 258 GDFQSFVKD---CLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp HHHHHHHHH---HTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHHH---HccCChhHCcCHHHHhh
Confidence 444455444 99999999999999865
No 317
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=33.52 E-value=28 Score=28.69 Aligned_cols=25 Identities=20% Similarity=0.329 Sum_probs=19.6
Q ss_pred HHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 183 KLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 183 ~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
.+.+++.. |+..+|.+||++.++++
T Consensus 384 ~~~dli~~---~L~~dP~~Rpta~e~L~ 408 (429)
T 3kvw_A 384 LFLDFLKQ---CLEWDPAVRMTPGQALR 408 (429)
T ss_dssp HHHHHHHH---HTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHH---HCCCChhhCCCHHHHhC
Confidence 34445544 99999999999999875
No 318
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=32.99 E-value=26 Score=26.67 Aligned_cols=26 Identities=15% Similarity=0.137 Sum_probs=20.3
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 251 ~~~~~li~~---~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 251 DDAKDLIRK---MLTFHPSLRITATQCLE 276 (287)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHH---HcccChhhCcCHHHHhc
Confidence 444455544 99999999999999976
No 319
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=32.87 E-value=35 Score=26.88 Aligned_cols=26 Identities=12% Similarity=0.024 Sum_probs=20.4
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 280 ~~~~~li~~---~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 280 PQAADLLEK---MLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHHHHHH---HSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHH---HcCCCcccCCCHHHHhc
Confidence 445555555 99999999999999874
No 320
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=32.12 E-value=26 Score=26.90 Aligned_cols=26 Identities=19% Similarity=0.185 Sum_probs=20.1
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 236 ~~~~~li~~---~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 236 ESAKDFICH---LLEKDPNERYTCEKALS 261 (304)
T ss_dssp HHHHHHHHH---HHCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHH---HcCCChhHCcCHHHHhc
Confidence 444555555 89999999999999874
No 321
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=32.06 E-value=22 Score=27.31 Aligned_cols=29 Identities=17% Similarity=0.268 Sum_probs=22.5
Q ss_pred HHHHHHHHHhhcccCCCCCCCC-CHHHHHHHhc
Q 035742 182 EKLISIMGVAFPCLNESPVSRP-TMQTVSQQLQ 213 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp-~m~~V~~~L~ 213 (214)
..+.+++.. |+..+|.+|| +++++.+.|+
T Consensus 242 ~~l~~li~~---~l~~dp~~R~~~~~~l~~~l~ 271 (294)
T 4eqm_A 242 QSLSNVILR---ATEKDKANRYKTIQEMKDDLS 271 (294)
T ss_dssp HHHHHHHHH---HSCSSGGGSCSSHHHHHHHHH
T ss_pred HHHHHHHHH---HhcCCHhHccccHHHHHHHHH
Confidence 444555544 9999999998 8999988875
No 322
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=31.94 E-value=27 Score=27.35 Aligned_cols=18 Identities=33% Similarity=0.311 Sum_probs=16.4
Q ss_pred cccCCCCCCCCCHHHHHH
Q 035742 193 PCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 193 ~C~~~~p~~Rp~m~~V~~ 210 (214)
.|+..+|.+||++.++++
T Consensus 254 ~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 254 RLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHSCSSGGGSCCHHHHHH
T ss_pred HHccCChhhCCCHHHHhc
Confidence 499999999999999975
No 323
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=31.84 E-value=27 Score=26.33 Aligned_cols=26 Identities=23% Similarity=0.199 Sum_probs=19.7
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 236 ~~~~~li~~---~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 236 PQAESLIRR---LLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHHHHHHHH---HTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHH---HccCChhhCcCHHHHhc
Confidence 344445444 99999999999999864
No 324
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=31.84 E-value=27 Score=27.56 Aligned_cols=26 Identities=23% Similarity=0.418 Sum_probs=20.5
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 249 ~~l~~li~~---~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 249 KELMSLVSG---LLQPVPERRTTLEKLVT 274 (335)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHH---HccCChhhCcCHHHHhc
Confidence 444555554 99999999999999986
No 325
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=31.53 E-value=28 Score=27.68 Aligned_cols=26 Identities=15% Similarity=0.043 Sum_probs=19.9
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++. .|+..+|.+||++.++.+
T Consensus 280 ~~~~~li~---~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 280 LNAKDLVR---KLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp HHHHHHHH---TTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHH---HHccCChhhCcCHHHHhc
Confidence 44444444 499999999999999875
No 326
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=31.47 E-value=27 Score=26.85 Aligned_cols=26 Identities=27% Similarity=0.478 Sum_probs=19.9
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 253 ~~l~~li~~---~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 253 DNFTDFVKQ---CLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HHHHHHHHH---HTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHHH---HccCChhhCcCHHHHHh
Confidence 344445444 99999999999999864
No 327
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=31.40 E-value=23 Score=27.77 Aligned_cols=19 Identities=21% Similarity=0.288 Sum_probs=16.6
Q ss_pred hcccCCCCCCCCCHHHHHH
Q 035742 192 FPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 192 l~C~~~~p~~Rp~m~~V~~ 210 (214)
..|+..+|.+||++.++++
T Consensus 300 ~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 300 TAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHHTCSSGGGSCCHHHHHT
T ss_pred HHHccCChhhCCCHHHHhC
Confidence 3499999999999999875
No 328
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=31.39 E-value=14 Score=28.77 Aligned_cols=26 Identities=19% Similarity=0.544 Sum_probs=20.1
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.+|++
T Consensus 260 ~~l~~li~~---~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 260 PSFINFVNL---CLTKDESKRPKYKELLK 285 (327)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHH---HhhCChhhCcCHHHHHh
Confidence 444555544 99999999999999864
No 329
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=31.10 E-value=25 Score=29.00 Aligned_cols=22 Identities=23% Similarity=0.434 Sum_probs=18.0
Q ss_pred HHhhcccCCCCCCCCCHHHHHH
Q 035742 189 GVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 189 ~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
.+-..|+..+|.+||++.+|++
T Consensus 274 ~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 274 DLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHhhCChhhCCCHHHHHh
Confidence 3344599999999999999875
No 330
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=30.64 E-value=24 Score=27.74 Aligned_cols=26 Identities=23% Similarity=0.203 Sum_probs=19.8
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 280 ~~~~~li~~---~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 280 PKGIDLLQR---MLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHHHHHHHH---HSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHH---hcCcCcccCCCHHHHhc
Confidence 334444444 99999999999999875
No 331
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=30.34 E-value=19 Score=28.19 Aligned_cols=26 Identities=19% Similarity=0.275 Sum_probs=19.6
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 262 ~~~~~li~~---~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 262 QLATDFIQS---LLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HHHHHHHHH---HSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHH---HcCCChhhCcCHHHHhC
Confidence 444444444 99999999999999864
No 332
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=30.10 E-value=20 Score=27.38 Aligned_cols=26 Identities=15% Similarity=0.183 Sum_probs=20.0
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 258 ~~l~~li~~---~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 258 DTVKDLVSR---FLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHHHHHH---HCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHH---HccCCcccCCCHHHHHh
Confidence 444555544 99999999999999864
No 333
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=30.01 E-value=39 Score=26.15 Aligned_cols=20 Identities=20% Similarity=0.082 Sum_probs=17.2
Q ss_pred hhcccCCCCCCCCCHHHHHH
Q 035742 191 AFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 191 ~l~C~~~~p~~Rp~m~~V~~ 210 (214)
-..|+..+|.+||++.++++
T Consensus 253 i~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 253 IRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHTTSCSSTTTSCCHHHHHH
T ss_pred HHHHcCCChhhCcCHHHHhc
Confidence 33599999999999999976
No 334
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=29.53 E-value=44 Score=26.63 Aligned_cols=20 Identities=25% Similarity=0.180 Sum_probs=17.2
Q ss_pred hhcccCCCCCCCCCHHHHHH
Q 035742 191 AFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 191 ~l~C~~~~p~~Rp~m~~V~~ 210 (214)
-..|+..+|.+||++.++++
T Consensus 340 i~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 340 ISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHcCCChhHCcCHHHHhc
Confidence 33499999999999999976
No 335
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=29.46 E-value=30 Score=27.76 Aligned_cols=24 Identities=25% Similarity=0.566 Sum_probs=18.8
Q ss_pred HHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 184 LISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 184 L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
+.+++. .|+..+|.+||++.++++
T Consensus 310 ~~~li~---~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 310 FHHFVE---QCLQRNPDARPSASTLLN 333 (389)
T ss_dssp HHHHHH---HHTCSCTTTSCCHHHHTT
T ss_pred HHHHHH---HHhhcCcccCCCHHHHhc
Confidence 444444 499999999999999864
No 336
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=29.37 E-value=15 Score=28.84 Aligned_cols=26 Identities=27% Similarity=0.484 Sum_probs=19.6
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++. .|+..+|.+||++.++++
T Consensus 281 ~~l~~li~---~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 281 EVVIDLAK---KCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp HHHHHHHH---HHTCSSGGGSCCGGGGGG
T ss_pred HHHHHHHH---HHhccCcccCCCHHHHhc
Confidence 34444444 499999999999998764
No 337
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=29.26 E-value=17 Score=27.52 Aligned_cols=26 Identities=15% Similarity=0.271 Sum_probs=19.7
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.+|++
T Consensus 237 ~~~~~li~~---~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 237 IEAKDLIHQ---LLRRNPADRLSLSSVLD 262 (278)
T ss_dssp HHHHHHHHH---HSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHH---HcccCHhhCCCHHHHhc
Confidence 344444444 99999999999999875
No 338
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=29.24 E-value=34 Score=26.77 Aligned_cols=26 Identities=19% Similarity=0.365 Sum_probs=19.8
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 236 ~~~~~li~~---~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 236 SAPLALLHK---ILVENPSARITIPDIKK 261 (323)
T ss_dssp HHHHHHHHH---HSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHH---HccCChhhCcCHHHHhh
Confidence 444444444 99999999999999865
No 339
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=29.10 E-value=42 Score=27.86 Aligned_cols=27 Identities=15% Similarity=0.169 Sum_probs=20.9
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 181 QEKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 181 ~~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
...+.+++.. |+..+|.+||++.++++
T Consensus 241 s~~~~~li~~---~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 241 TPEAKDLINK---MLTINPSKRITAAEALK 267 (444)
T ss_dssp CHHHHHHHHH---HSCSSTTTSCCHHHHHH
T ss_pred CHHHHHHHHH---HcCCChhHCCCHHHHhc
Confidence 3455555555 99999999999999875
No 340
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=28.92 E-value=24 Score=27.40 Aligned_cols=26 Identities=15% Similarity=0.160 Sum_probs=20.1
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++. .|+..+|.+||++.++++
T Consensus 294 ~~~~~li~---~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 294 PEALDFLD---KLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHHHH---TTSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHH---HHhcCCcccCCCHHHHhc
Confidence 44444444 499999999999999875
No 341
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=28.51 E-value=17 Score=28.48 Aligned_cols=26 Identities=23% Similarity=0.524 Sum_probs=20.0
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.+|++
T Consensus 285 ~~~~~li~~---~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 285 AEFVDFTSQ---CLKKNSKERPTYPELMQ 310 (340)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHH---HccCCcccCcCHHHHhc
Confidence 444445444 99999999999999865
No 342
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=28.47 E-value=34 Score=26.97 Aligned_cols=27 Identities=15% Similarity=0.213 Sum_probs=20.6
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQQ 211 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~~ 211 (214)
..+.+++.. |+..+|.+||++.++++.
T Consensus 266 ~~~~~li~~---~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 266 DDLLDLIQG---LFLFNPCARITATQALKM 292 (346)
T ss_dssp HHHHHHHHH---HHCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHH---HhccChhhCCCHHHHhcC
Confidence 444455554 999999999999998753
No 343
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=28.09 E-value=28 Score=26.93 Aligned_cols=26 Identities=23% Similarity=0.485 Sum_probs=20.3
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 261 ~~l~~li~~---~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 261 KKFQSFIES---CLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHHHHHHHH---HCCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHH---HhccChhhCCCHHHHhh
Confidence 444555554 99999999999999875
No 344
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=27.75 E-value=29 Score=26.24 Aligned_cols=26 Identities=15% Similarity=0.222 Sum_probs=19.7
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 237 ~~~~~li~~---~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 237 DGSKDLISK---LLRYHPPQRLPLKGVME 262 (284)
T ss_dssp HHHHHHHHH---HSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHH---HhhcCHhhCCCHHHHhh
Confidence 344444444 89999999999999875
No 345
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=27.18 E-value=43 Score=26.71 Aligned_cols=26 Identities=12% Similarity=0.024 Sum_probs=19.8
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 298 ~~~~~li~~---~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 298 PQAADLLEK---MLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHHHHHHHH---HSCSCTTTSCCHHHHHT
T ss_pred hHHHHHHHH---HCCCChhhcCCHHHHhc
Confidence 344445444 99999999999999874
No 346
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=27.15 E-value=33 Score=26.55 Aligned_cols=20 Identities=20% Similarity=0.102 Sum_probs=16.9
Q ss_pred hhcccCCCCCCCCCHHHHHH
Q 035742 191 AFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 191 ~l~C~~~~p~~Rp~m~~V~~ 210 (214)
-..|+..+|.+||++.++++
T Consensus 255 i~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 255 VKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHcccCHhhCCCHHHHhh
Confidence 33499999999999999874
No 347
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=26.62 E-value=41 Score=26.82 Aligned_cols=25 Identities=12% Similarity=0.117 Sum_probs=19.3
Q ss_pred HHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 183 KLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 183 ~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
.+.+++. .|+..+|.+||++.++++
T Consensus 294 ~~~~li~---~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 294 QARDLLS---KMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHHHHH---HHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHH---HHCcCChhhCCCHHHHhC
Confidence 3444444 499999999999999875
No 348
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=26.53 E-value=19 Score=28.10 Aligned_cols=26 Identities=15% Similarity=0.189 Sum_probs=19.6
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++.+
T Consensus 268 ~~l~~li~~---~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 268 GNLMDFLHG---LLQLNPDMRLSAKQALH 293 (317)
T ss_dssp HHHHHHHHH---HSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHH---HCCCCcccCCCHHHHhC
Confidence 344445444 99999999999999864
No 349
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=26.52 E-value=34 Score=26.72 Aligned_cols=20 Identities=25% Similarity=0.017 Sum_probs=17.2
Q ss_pred hhcccCCCCCCCCCHHHHHH
Q 035742 191 AFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 191 ~l~C~~~~p~~Rp~m~~V~~ 210 (214)
-..|+..+|.+||++.++++
T Consensus 238 i~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 238 VDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHcCCChhHCcCHHHHhc
Confidence 34599999999999999876
No 350
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=26.46 E-value=24 Score=28.24 Aligned_cols=26 Identities=8% Similarity=-0.000 Sum_probs=20.2
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 334 ~~~~~li~~---~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 334 QPVRALLEG---FLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHHHH---HTCSSGGGCCCHHHHHT
T ss_pred HHHHHHHHH---HcCCCchhCCCHHHHhh
Confidence 444555544 99999999999999875
No 351
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=26.14 E-value=45 Score=26.37 Aligned_cols=26 Identities=19% Similarity=0.155 Sum_probs=19.7
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 261 ~~~~~li~~---~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 261 ESAKDLVRR---MLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHHHHHHH---HTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHH---HCCCChhHCcCHHHHhc
Confidence 344444444 99999999999999874
No 352
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=26.01 E-value=45 Score=26.41 Aligned_cols=25 Identities=16% Similarity=0.251 Sum_probs=19.3
Q ss_pred HHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 183 KLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 183 ~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
.+.+++.. |+..+|.+||++.++++
T Consensus 289 ~~~~li~~---~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 289 KALDLLDK---MLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHHHHHH---HTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHH---HcCCChhhCCCHHHHhc
Confidence 34444444 99999999999999875
No 353
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=25.81 E-value=27 Score=27.26 Aligned_cols=24 Identities=8% Similarity=-0.002 Sum_probs=18.7
Q ss_pred HHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 184 LISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 184 L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
+.+++.. |+..+|.+||++.++++
T Consensus 258 ~~~li~~---~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 258 GADLLTK---LLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHHHHH---HSCSSGGGSCCHHHHTT
T ss_pred HHHHHHH---HcCcCcccCCCHHHHhc
Confidence 3444444 99999999999999864
No 354
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=24.65 E-value=35 Score=26.80 Aligned_cols=22 Identities=14% Similarity=0.036 Sum_probs=17.8
Q ss_pred HHhhcccCCCCCCCCCHHHHHH
Q 035742 189 GVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 189 ~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
.+-..|+..+|.+||++.++++
T Consensus 290 ~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 290 DLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhcCChhhCCCHHHHhC
Confidence 3334599999999999999875
No 355
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=24.22 E-value=33 Score=27.83 Aligned_cols=26 Identities=15% Similarity=0.221 Sum_probs=19.9
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++. .|+..+|.+||++.++++
T Consensus 279 ~~~~~li~---~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 279 PEAKDFIK---NLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp HHHHHHHH---TTSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHH---HHcCCChhHCcCHHHHhh
Confidence 44444444 499999999999999875
No 356
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=24.02 E-value=62 Score=26.36 Aligned_cols=20 Identities=20% Similarity=0.102 Sum_probs=17.0
Q ss_pred hhcccCCCCCCCCCHHHHHH
Q 035742 191 AFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 191 ~l~C~~~~p~~Rp~m~~V~~ 210 (214)
-..|+..+|.+||++.++++
T Consensus 380 i~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 380 VKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHccCChhHCcCHHHHhC
Confidence 33499999999999999875
No 357
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=24.00 E-value=37 Score=26.80 Aligned_cols=19 Identities=16% Similarity=0.146 Sum_probs=16.6
Q ss_pred hcccCCCCCCCCCHHHHHH
Q 035742 192 FPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 192 l~C~~~~p~~Rp~m~~V~~ 210 (214)
..|+..+|.+||++.++++
T Consensus 298 ~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 298 AKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHTCSSGGGSCCHHHHHT
T ss_pred HHHhcCChhhCCCHHHHHc
Confidence 3499999999999999875
No 358
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=23.94 E-value=54 Score=26.09 Aligned_cols=26 Identities=8% Similarity=0.245 Sum_probs=19.7
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++.+
T Consensus 249 ~~~~~li~~---~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 249 PECCHLISR---IFVADPATRISIPEIKT 274 (361)
T ss_dssp HHHHHHHHH---HSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHH---HccCChhHCcCHHHHHh
Confidence 344444444 99999999999999864
No 359
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=23.84 E-value=22 Score=27.19 Aligned_cols=26 Identities=23% Similarity=0.409 Sum_probs=19.6
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 240 ~~~~~li~~---~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 240 PVAASLIQK---MLQTDPTARPTINELLN 265 (294)
T ss_dssp HHHHHHHHH---HTCSSGGGSCCGGGGGG
T ss_pred HHHHHHHHH---HcccChhhCcCHHHHhh
Confidence 334444444 89999999999999875
No 360
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=23.69 E-value=42 Score=26.60 Aligned_cols=26 Identities=19% Similarity=0.224 Sum_probs=19.9
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.+|.+
T Consensus 252 ~~~~~li~~---~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 252 DTAKDLVSK---MLHVDPHQRLTAALVLR 277 (342)
T ss_dssp HHHHHHHHH---HTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHH---HCCCChhHCcCHHHHhc
Confidence 444555555 89999999999998864
No 361
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=23.30 E-value=39 Score=26.97 Aligned_cols=18 Identities=22% Similarity=0.344 Sum_probs=16.1
Q ss_pred cccCCCCCCCCCHHHHHH
Q 035742 193 PCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 193 ~C~~~~p~~Rp~m~~V~~ 210 (214)
.|+..+|.+||++.++++
T Consensus 243 ~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 243 QMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp HHTCSSGGGSCCHHHHHT
T ss_pred HHcccCHhHCcCHHHHhc
Confidence 489999999999999875
No 362
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=22.70 E-value=47 Score=26.78 Aligned_cols=26 Identities=19% Similarity=0.266 Sum_probs=20.2
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++.+
T Consensus 298 ~~~~dli~~---~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 298 PSLKGFLDR---LLVRDPAQRATAAELLK 323 (346)
T ss_dssp HHHHHHHHH---HSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHH---HcCCChhHCcCHHHHhc
Confidence 455555555 99999999999998854
No 363
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=22.66 E-value=46 Score=27.00 Aligned_cols=26 Identities=19% Similarity=0.296 Sum_probs=20.3
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.+|.+
T Consensus 296 ~~~~~li~~---~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 296 EEVKMLIRN---LLKTEPTQRMTITEFMN 321 (400)
T ss_dssp HHHHHHHHT---TSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHH---HCCCChhHCcCHHHHhc
Confidence 444555544 99999999999999875
No 364
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=22.27 E-value=49 Score=25.97 Aligned_cols=18 Identities=22% Similarity=0.414 Sum_probs=15.9
Q ss_pred cccCCCCCCCCCHHHHHH
Q 035742 193 PCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 193 ~C~~~~p~~Rp~m~~V~~ 210 (214)
.|+..+|.+||++.++++
T Consensus 247 ~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 247 RFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp HHCCSSTTTSCCHHHHTT
T ss_pred HHCCCChhHCcCHHHHhc
Confidence 389999999999999864
No 365
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=20.95 E-value=24 Score=27.70 Aligned_cols=26 Identities=15% Similarity=0.181 Sum_probs=19.4
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 245 ~~~~~li~~---~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 245 QEAKDLIQG---LLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHHHHHHHH---HHCCCTTTCCCTTTSTT
T ss_pred HHHHHHHHH---HCCCChhHCCCHHHHhc
Confidence 444455554 89999999999988753
No 366
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=20.49 E-value=52 Score=27.10 Aligned_cols=21 Identities=19% Similarity=0.317 Sum_probs=17.4
Q ss_pred HhhcccCCCCCCCCCHHHHHH
Q 035742 190 VAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 190 ~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
+-..|+..+|.+||++.+|++
T Consensus 263 li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 263 LIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp HHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhCCHhhCCCHHHHHh
Confidence 333499999999999999974
No 367
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=20.30 E-value=66 Score=26.92 Aligned_cols=26 Identities=12% Similarity=0.088 Sum_probs=19.6
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 035742 182 EKLISIMGVAFPCLNESPVSRPTMQTVSQ 210 (214)
Q Consensus 182 ~~L~~l~~~~l~C~~~~p~~Rp~m~~V~~ 210 (214)
..+.+++.. |+..+|.+||++.++++
T Consensus 276 ~~~~~li~~---~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 276 DEAKELIKL---MLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHHHHHHHH---HTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHH---HcCCChhHCCCHHHHhc
Confidence 334444444 99999999999999864
Done!