BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035745
(503 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 206/481 (42%), Gaps = 50/481 (10%)
Query: 15 SRKANAKLPPGPRGLPVIGYLPFLGTT-DLHKTFTELAGAYGPIFKLWLGNKLCVVVSSP 73
++K AK P LP++G LPFL +H F +L YGPI+ + +G K V+V
Sbjct: 2 AKKTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHH 61
Query: 74 SLVKQVVRDQDITFANRDPPIAGL-VASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASL 132
L K+V+ + F+ R P +A L +AS I F++ G W+ R+L M
Sbjct: 62 QLAKEVLIKKGKDFSGR-PQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFA--LFK 118
Query: 133 DACYALRK---QEVKNIIRDL--YNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALEL 187
D L K QE+ + L +N I P+ V ++ + +C + G+ EL
Sbjct: 119 DGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDP-EL 177
Query: 188 REKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDS 247
N G ++ + ++ D++P L + +EK + + + ++
Sbjct: 178 NVIQNYNEG---------IIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIR-NDLLNK 227
Query: 248 AVEQYRNKVSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKALLVNFIV 307
+E Y+ K + N D+ ++ Q LL + +
Sbjct: 228 ILENYKEKFR------------SDSITNMLDTLMQAKMNSDNGNA-GPDQDSELLSDNHI 274
Query: 308 IVLTGHNFWWNRHXXXXXXXXXXE-LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKY 366
+ G F L+HNP+V KK+ EE+ Q VG +L
Sbjct: 275 LTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLL 334
Query: 367 LDAVVKETFRLHSV-PYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
L+A ++E RL V P L+P +A+ SSIG + V K T +I+N+WA+H + + W P +F
Sbjct: 335 LEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQF 394
Query: 426 GPEKFLNDG----IASKFDY----------SGIALAERMLMFVLASLLHSFDWKLPAGTK 471
PE+FLN I+ Y G LA + L ++A LL FD ++P +
Sbjct: 395 MPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQ 454
Query: 472 L 472
L
Sbjct: 455 L 455
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 129/506 (25%), Positives = 217/506 (42%), Gaps = 69/506 (13%)
Query: 12 VKKSRKANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVS 71
KK+ K PPGP G P+IG++ LG + H + ++ YG + ++ +G+ VV+S
Sbjct: 2 AKKTSSKGLKNPPGPWGWPLIGHMLTLGK-NPHLALSRMSQQYGDVLQIRIGSTPVVVLS 60
Query: 72 SPSLVKQVVRDQDITFANRDPPIAGLVASFGGNDILFS-NYGPEWRKLRKLFMGKLMS-- 128
++Q + Q F R P + G + FS + GP W R+L L S
Sbjct: 61 GLDTIRQALVRQGDDFKGR-PDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLKSFS 119
Query: 129 ----NASLDACYALRK--QEVKNIIRDLYN-NNKTGIGKPIDVGELSISTFVCVIQNMLW 181
AS +CY +E + +I L G P +S++ +C I +
Sbjct: 120 IASDPASSTSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAI---CF 176
Query: 182 GEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCF 241
G + + + +L E+V G+ N +D IP+L +L + K ++ F
Sbjct: 177 GRRYDHNHQELLSLVNLNN-NFGEVV---GSGNPADFIPILRYLPNPSLNA-FKDLNEKF 231
Query: 242 ENFIDSAVEQYRNKVSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKAL 301
+F+ V+++ +D E + +QL
Sbjct: 232 YSFMQKMVKEHYKTFE------------KGHIRDITDSLIEHC-QEKQLDENANVQLSDE 278
Query: 302 LVNFIVIVLTGHNFWWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMDS---CVEE 358
+ IV+ L G F L+ NPRV +K+QEEL V+G +
Sbjct: 279 KIINIVLDLFGAGF---DTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDR 335
Query: 359 FHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQ 417
HLP Y++A + ETFR S VP+ +P ++ +S+ G+ +PK + +N W I+ D +
Sbjct: 336 SHLP---YMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQK 392
Query: 418 IWDNPLEFGPEKFLN-DGIASKFDYSGIALAERMLMF-------------------VLAS 457
+W NP EF PE+FL DG K L+E++++F LA
Sbjct: 393 LWVNPSEFLPERFLTPDGAIDK------VLSEKVIIFGMGKRKCIGETIARWEVFLFLAI 446
Query: 458 LLHSFDWKLPAGTKLDLSEKFGILIK 483
LL ++ +P G K+D++ +G+ +K
Sbjct: 447 LLQRVEFSVPLGVKVDMTPIYGLTMK 472
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/487 (23%), Positives = 203/487 (41%), Gaps = 50/487 (10%)
Query: 21 KLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVV 80
K PP P G P++G++ LG + H + ++ YG + ++ +G+ +V+S ++Q +
Sbjct: 16 KSPPEPWGWPLLGHVLTLGK-NPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQAL 74
Query: 81 RDQDITFANRDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMS------NASLDA 134
Q F R + + G + ++ GP W R+L L + AS +
Sbjct: 75 VRQGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSS 134
Query: 135 CYALRK--QEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREKGI 192
CY +E K +I L G G D + + VI M +G+ +
Sbjct: 135 CYLEEHVSKEAKALISRL-QELMAGPGH-FDPYNQVVVSVANVIGAMCFGQHFPESSDEM 192
Query: 193 SNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQY 252
+L E V + N D P+L +L ++ R K + F F+ V+++
Sbjct: 193 LSLVKNTH----EFVETASSGNPLDFFPILRYLPNPALQ-RFKAFNQRFLWFLQKTVQEH 247
Query: 253 RNKVSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKALLVNFIVIVLTG 312
+D AS Q K +VN + + G
Sbjct: 248 YQDFD------------KNSVRDITGALFKHSKKGPRASGNLIPQEK--IVNLVNDIF-G 292
Query: 313 HNFWWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVK 372
F L+ P + +K+Q+EL V+G + P+L YL+A +
Sbjct: 293 AGF---DTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFIL 349
Query: 373 ETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFL 431
ETFR S +P+ +P ++ +++ G+ +PK + +N W ++ DP++W++P EF PE+FL
Sbjct: 350 ETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFL 409
Query: 432 N-DGIA--------------SKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSE 476
DG A K G LA+ + LA LL ++ +P G K+DL+
Sbjct: 410 TADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTP 469
Query: 477 KFGILIK 483
+G+ +K
Sbjct: 470 IYGLTMK 476
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 204/474 (43%), Gaps = 53/474 (11%)
Query: 12 VKKSRKANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVS 71
KK+ KLPPGP LPVIG + +G D+ K+ T L+ YGP+F L+ G K VV+
Sbjct: 2 AKKTSSGRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLH 61
Query: 72 SPSLVKQVVRDQDITFANRDP-PIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNA 130
VK+ + D F+ R P+A G I+FSN G +W+++R+ + L +
Sbjct: 62 GYEAVKEALIDLGEEFSGRGIFPLAERANR--GFGIVFSN-GKKWKEIRRFSLMTLRNFG 118
Query: 131 SLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREK 190
R QE + + K P + + +C I ++ + + +++
Sbjct: 119 MGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSI---IFHKRFDYKDQ 175
Query: 191 GISNLGAEIKFKLAELVVLMGTPNI---SDIIPVLSWLDIQGIEKRTKKISLCFENFIDS 247
NL KL E + ++ +P I ++ P++ + G + K +++I
Sbjct: 176 QFLNLME----KLNENIKILSSPWIQICNNFSPIIDYF--PGTHNKLLKNVAFMKSYILE 229
Query: 248 AVEQYRNKVSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKALLVNFIV 307
V++++ + + F N+ S +I +++ A+ +
Sbjct: 230 KVKEHQESMDM--------NNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAG 281
Query: 308 IVLTGHNFWWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMDS--CVEE-FHLPKL 364
T + L+ +P V KVQEE+ +V+G + C+++ H+P
Sbjct: 282 TETTSTTLRY----------ALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMP-- 329
Query: 365 KYLDAVVKETFR-LHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPL 423
Y DAVV E R + +P +P + Y +PK TTI++++ ++ D + + NP
Sbjct: 330 -YTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPE 388
Query: 424 EFGPEKFLNDG------------IASKFDYSGIALAERMLMFVLASLLHSFDWK 465
F P FL++G A K G ALA L L S+L +F+ K
Sbjct: 389 MFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLK 442
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 199/476 (41%), Gaps = 58/476 (12%)
Query: 12 VKKSRKANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVS 71
+ K + KLPPGP LP+IG L L ++ K+FT LA +GP+F L++G++ VV+
Sbjct: 1 MAKKTSSKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMH 60
Query: 72 SPSLVKQVVRDQDITFANRDPPIAGLVASFGGND--ILFSNYGPEWRKLRKLFMGKLMSN 129
VK+ + D F+ R L A D I+F+N GP W+ +R+ + L +
Sbjct: 61 GYKAVKEALLDYKDEFSGR----GDLPAFHAHRDRGIIFNN-GPTWKDIRRFSLTTLRN- 114
Query: 130 ASLDACYALRKQEVKNIIRD----LYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEAL 185
Y + KQ ++ I+ L + G+P D L VI ++L+ +
Sbjct: 115 ------YGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILFRKHF 168
Query: 186 ELREKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLD-IQGIEKRTKKISLCFENF 244
+ ++ L + E L+ TP + S+L + G ++ K + +
Sbjct: 169 DYNDEKFLRL----MYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEY 224
Query: 245 IDSAVEQYRNKVSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKALLVN 304
+ V+++ + K+ + SA + T+ +
Sbjct: 225 VSERVKEHHQSLDPNCPRDLTDCLLVEMEKE-----------KHSAERLYTM-------D 266
Query: 305 FIVIVLTGHNFWWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKL 364
I + + F LM P + +K+ EE+ +V+G ++
Sbjct: 267 GITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEM 326
Query: 365 KYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPL 423
Y+DAVV E R + VP +P A++ + GY +PK T ++ + ++ D Q + +P
Sbjct: 327 PYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPE 386
Query: 424 EFGPEKFLNDGIASKFDYS--------------GIALAERMLMFVLASLLHSFDWK 465
+F PE FLN+ KF YS G LA L +L ++L F+ K
Sbjct: 387 KFKPEHFLNEN--GKFKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLK 440
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 199/480 (41%), Gaps = 44/480 (9%)
Query: 14 KSRKANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSP 73
K + KLPPGP LP IG L T ++ + +++ YGP+F + LG + VV+
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGH 62
Query: 74 SLVKQVVRDQDITFANRDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLD 133
V++ + DQ F+ R A F G ++FSN G ++LR+ + L
Sbjct: 63 DAVREALVDQAEEFSGRGEQ-ATFDWVFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGK 120
Query: 134 ACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREKGIS 193
R QE + D TG G ID T VI ++++G+ + ++K
Sbjct: 121 RGIEERIQEEAGFLIDALRG--TG-GANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFL 177
Query: 194 NLGAEIKFKLAELVVLMGTPNISDIIPVLSWL--DIQGIEKRTKKISLCFENFIDSAVEQ 251
+L ++ + + + + + S + + G +++ ++ E+FI VE
Sbjct: 178 SL-----LRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEH 232
Query: 252 YRNKVSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKALLVNFIVIVLT 311
+ + +DF E+ + + LK L++ + + +
Sbjct: 233 NQRTLD------------PNSPRDFIDSFLIRMQEEEKNPN-TEFYLKNLVMTTLQLFIG 279
Query: 312 GHNFWWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVV 371
G LM +P V KV EE+ +V+G + + K+ Y++AV+
Sbjct: 280 G-----TETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVI 334
Query: 372 KETFRLHSV-PYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKF 430
E R V P + RR + + + +PK T + + ++ RDP + NP +F P+ F
Sbjct: 335 HEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF 394
Query: 431 LND-GIASKFD----YS-------GIALAERMLMFVLASLLHSFDWKLPAGTK-LDLSEK 477
LN+ G K D +S G LA L +++ +F K K +D+S K
Sbjct: 395 LNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPK 454
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 199/480 (41%), Gaps = 44/480 (9%)
Query: 14 KSRKANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSP 73
K + KLPPGP LP IG L T ++ + +++ YGP+F + LG + VV+
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGH 62
Query: 74 SLVKQVVRDQDITFANRDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLD 133
V++ + DQ F+ R A F G ++FSN G ++LR+ + L
Sbjct: 63 DAVREALVDQAEEFSGRGEQ-ATFDWVFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGK 120
Query: 134 ACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREKGIS 193
R QE + D TG G ID T VI ++++G+ + ++K
Sbjct: 121 RGIEERIQEEAGFLIDALRG--TG-GANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFL 177
Query: 194 NLGAEIKFKLAELVVLMGTPNISDIIPVLSWL--DIQGIEKRTKKISLCFENFIDSAVEQ 251
+L ++ + + + + + S + + G +++ ++ E+FI VE
Sbjct: 178 SL-----LRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEH 232
Query: 252 YRNKVSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKALLVNFIVIVLT 311
+ + +DF E+ + + LK L++ + + +
Sbjct: 233 NQRTLD------------PNSPRDFIDSFLIRMQEEEKNPN-TEFYLKNLVMTTLNLFIG 279
Query: 312 GHNFWWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVV 371
G LM +P V KV EE+ +V+G + + K+ Y++AV+
Sbjct: 280 G-----TETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVI 334
Query: 372 KETFRLHSV-PYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKF 430
E R V P + RR + + + +PK T + + ++ RDP + NP +F P+ F
Sbjct: 335 HEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF 394
Query: 431 LND-GIASKFD----YS-------GIALAERMLMFVLASLLHSFDWKLPAGTK-LDLSEK 477
LN+ G K D +S G LA L +++ +F K K +D+S K
Sbjct: 395 LNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPK 454
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 199/480 (41%), Gaps = 44/480 (9%)
Query: 14 KSRKANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSP 73
K + KLPPGP LP IG L T ++ + +++ YGP+F + LG + VV+
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGH 62
Query: 74 SLVKQVVRDQDITFANRDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLD 133
V++ + DQ F+ R A F G ++FSN G ++LR+ + L
Sbjct: 63 DAVREALVDQAEEFSGRGEQ-ATFDWVFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGK 120
Query: 134 ACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREKGIS 193
R QE + D TG G ID T VI ++++G+ + ++K
Sbjct: 121 RGIEERIQEEAGFLIDALRG--TG-GANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFL 177
Query: 194 NLGAEIKFKLAELVVLMGTPNISDIIPVLSWL--DIQGIEKRTKKISLCFENFIDSAVEQ 251
+L ++ + + + + + S + + G +++ ++ E+FI VE
Sbjct: 178 SL-----LRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEH 232
Query: 252 YRNKVSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKALLVNFIVIVLT 311
+ + +DF E+ + + LK L++ + + +
Sbjct: 233 NQRTLD------------PNSPRDFIDSFLIRMQEEEKNPN-TEFYLKNLVMTTLQLFVG 279
Query: 312 GHNFWWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVV 371
G LM +P V KV EE+ +V+G + + K+ Y++AV+
Sbjct: 280 G-----TETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVI 334
Query: 372 KETFRLHSV-PYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKF 430
E R V P + RR + + + +PK T + + ++ RDP + NP +F P+ F
Sbjct: 335 HEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF 394
Query: 431 LND-GIASKFD----YS-------GIALAERMLMFVLASLLHSFDWKLPAGTK-LDLSEK 477
LN+ G K D +S G LA L +++ +F K K +D+S K
Sbjct: 395 LNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPK 454
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 195/472 (41%), Gaps = 49/472 (10%)
Query: 12 VKKSRKANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVS 71
KK+ KLPPGP LPVIG + + D+ K+ T L+ YGP+F L+ G + VV+
Sbjct: 2 AKKTSSGRGKLPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLH 61
Query: 72 SPSLVKQVVRDQDITFANRDP-PIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNA 130
+VK+ + D F+ R P+A G I+FSN G W+++R+ + L +
Sbjct: 62 GYEVVKEALIDLGEEFSGRGHFPLAERANR--GFGIVFSN-GKRWKEIRRFSLMTLRNFG 118
Query: 131 SLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREK 190
R QE + + K P + + +C I ++ + + +++
Sbjct: 119 MGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSI---IFQKRFDYKDQ 175
Query: 191 GISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLD-IQGIEKRTKKISLCFENFIDSAV 249
NL KL E + ++ TP I + +D G + K E+ I V
Sbjct: 176 QFLNLME----KLNENIRIVSTPWIQICNNFPTIIDYFPGTHNKLLKNLAFMESDILEKV 231
Query: 250 EQYRNKVSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKALLVNFIVIV 309
++++ + + +DF E S ++ L++ ++
Sbjct: 232 KEHQESMDI------------NNPRDFIDCFLIKMEKEKQNQQ-SEFTIENLVITAADLL 278
Query: 310 LTGHNFWWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMDS--CVEEF-HLPKLKY 366
G L+ +P V KVQEE+ +VVG + C+++ H+P Y
Sbjct: 279 GAG-----TETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMP---Y 330
Query: 367 LDAVVKETFR-LHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
DAVV E R + +P +P + Y +PK TTI+ ++ ++ D + + NP F
Sbjct: 331 TDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMF 390
Query: 426 GPEKFLNDG------------IASKFDYSGIALAERMLMFVLASLLHSFDWK 465
P FL++G A K G LA L L +L +F+ K
Sbjct: 391 DPRHFLDEGGNFKKSNYFMPFSAGKRICVGEGLARMELFLFLTFILQNFNLK 442
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 198/480 (41%), Gaps = 44/480 (9%)
Query: 14 KSRKANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSP 73
K + KLPPGP LP IG L T ++ + +++ YGP+F + LG + VV+
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGH 62
Query: 74 SLVKQVVRDQDITFANRDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLD 133
V++ + DQ F+ R A F G ++FSN G ++LR+ + L
Sbjct: 63 DAVREALVDQAEEFSGRGEQ-ATFDWVFKGYGVVFSN-GERAKQLRRFSIATLRDFGVGK 120
Query: 134 ACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREKGIS 193
R QE + D TG G ID T VI ++++G+ + ++K
Sbjct: 121 RGIEERIQEEAGFLIDALRG--TG-GANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFL 177
Query: 194 NLGAEIKFKLAELVVLMGTPNISDIIPVLSWL--DIQGIEKRTKKISLCFENFIDSAVEQ 251
+L ++ + + + + + S + + G +++ + E+FI VE
Sbjct: 178 SL-----LRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQCLQGLEDFIAKKVEH 232
Query: 252 YRNKVSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKALLVNFIVIVLT 311
+ + +DF E+ + + LK L++ + + +
Sbjct: 233 NQRTLD------------PNSPRDFIDSFLIRMQEEEKNPN-TEFYLKNLVMTTLQLFIG 279
Query: 312 GHNFWWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVV 371
G LM +P V KV EE+ +V+G + + K+ Y++AV+
Sbjct: 280 G-----TETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVI 334
Query: 372 KETFRLHSV-PYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKF 430
E R V P + RR + + + +PK T + + ++ RDP + NP +F P+ F
Sbjct: 335 HEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF 394
Query: 431 LND-GIASKFD----YS-------GIALAERMLMFVLASLLHSFDWKLPAGTK-LDLSEK 477
LN+ G K D +S G LA L +++ +F K K +D+S K
Sbjct: 395 LNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPK 454
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 202/470 (42%), Gaps = 50/470 (10%)
Query: 15 SRKANAK-LPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSP 73
++K ++K PPGP LPVIG + +G D+ K+ T L+ YGP+F L+ G K VV+
Sbjct: 2 AKKTSSKGRPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGY 61
Query: 74 SLVKQVVRDQDITFANRDP-PIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASL 132
VK+ + D F+ R P+A G I+FSN G +W+++R+ + L +
Sbjct: 62 EAVKEALIDLGEEFSGRGIFPLAERANR--GFGIVFSN-GKKWKEIRRFSLMTLRNFGMG 118
Query: 133 DACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREKGI 192
R QE + + K P + + +C I ++ + + +++
Sbjct: 119 KRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSI---IFHKRFDYKDQQF 175
Query: 193 SNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLD-IQGIEKRTKKISLCFENFIDSAVEQ 251
NL KL E + ++ +P I + LD G + K +++I V++
Sbjct: 176 LNLME----KLNENIEILSSPWIQVYNNFPALLDYFPGTHNKLLKNVAFMKSYILEKVKE 231
Query: 252 YRNKVSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKALLVNFIVIVLT 311
++ + + F N+ S +I +++ A+ + T
Sbjct: 232 HQESMDM--------NNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETT 283
Query: 312 GHNFWWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMDS--CVEE-FHLPKLKYLD 368
+ L+ +P V KVQEE+ +V+G + C+++ H+P Y D
Sbjct: 284 STTLRY----------ALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMP---YTD 330
Query: 369 AVVKETFR-LHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGP 427
AVV E R + +P +P + Y +PK TTI++++ ++ D + + NP F P
Sbjct: 331 AVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDP 390
Query: 428 EKFLNDG------------IASKFDYSGIALAERMLMFVLASLLHSFDWK 465
FL++G A K G ALA L L S+L +F+ K
Sbjct: 391 HHFLDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLK 440
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 200/469 (42%), Gaps = 56/469 (11%)
Query: 14 KSRKANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSP 73
K + KLPPGP P+IG + + D+ K+ T+ + YGP+F ++LG K VV+
Sbjct: 3 KKTSSKGKLPPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGY 62
Query: 74 SLVKQVVRDQDITFANRDP-PIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASL 132
VK+ + D FA R PI V+ G I FSN W+++R+ + L +
Sbjct: 63 EAVKEALVDLGEEFAGRGSVPILEKVSK--GLGIAFSN-AKTWKEMRRFSLMTLRNFGMG 119
Query: 133 DACYALR-KQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREKG 191
R ++E + ++ +L N + P D + VI ++++ + +++
Sbjct: 120 KRSIEDRIQEEARCLVEELRKTNAS----PCDPTFILGCAPCNVICSVIFHNRFDYKDEE 175
Query: 192 ISNLGAEIKFKLAELVVLMGTP--NISDIIPVLSWLD-IQGIEKRTKKISLCFENFIDSA 248
L L E V L+GTP + + P L LD GI K K + +NFI
Sbjct: 176 FLKLME----SLHENVELLGTPWLQVYNNFPAL--LDYFPGIHKTLLKNADYIKNFIMEK 229
Query: 249 VEQYRNKVSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKALLVNFIVI 308
V++++ + V +DF E++ L++L++ +
Sbjct: 230 VKEHQKLLDV------------NNPRDFIDCFLIKMEQENNLE----FTLESLVIAVSDL 273
Query: 309 VLTGHNFWWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMDS--CVEEFHLPKLKY 366
G L+ +P V +VQEE+ +V+G C+++ ++ Y
Sbjct: 274 FGAG-----TETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQD--RSRMPY 326
Query: 367 LDAVVKETFR-LHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
DAV+ E R + +P +P ++ Y +PK T II ++ ++ D + + NP F
Sbjct: 327 TDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVF 386
Query: 426 GPEKFLND-GIASKFDY-----------SGIALAERMLMFVLASLLHSF 462
P FL++ G K DY G LA L L S+L +F
Sbjct: 387 DPGHFLDESGNFKKSDYFMPFSAGKRMCVGEGLARMELFLFLTSILQNF 435
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/487 (23%), Positives = 201/487 (41%), Gaps = 54/487 (11%)
Query: 12 VKKSRKANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVS 71
+ K + KLPPGP LP IG L T ++ + +++ YGP+F + LG + VV+
Sbjct: 1 MAKKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLC 60
Query: 72 SPSLVKQVVRDQDITFANRDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNAS 131
V++ + DQ F+ R A F G ++FSN G ++LR+ + L
Sbjct: 61 GHDAVREALVDQAEEFSGRGEQ-ATFDWVFKGYGVVFSN-GERAKQLRRFSIATLRDFGV 118
Query: 132 LDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREKG 191
R QE + D TG G ID T VI ++++G+ + ++K
Sbjct: 119 GKRGIEERIQEEAGFLIDALRG--TG-GANIDPTFFLSRTVSNVISSIVFGDRFDYKDKE 175
Query: 192 ISNLGAEIKFKLAELVVLMGT-----PNISDIIPVLSWL--DIQGIEKRTKKISLCFENF 244
L+ L +++G+ + + + S + + G +++ ++ E+F
Sbjct: 176 F----------LSLLRMMLGSFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDF 225
Query: 245 IDSAVEQYRNKVSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKALLVN 304
I VE + + +DF E+ + + LK L++
Sbjct: 226 IAKKVEHNQRTLD------------PNSPRDFIDSFLIRMQEEEKNPN-TEFYLKNLVMT 272
Query: 305 FIVIVLTGHNFWWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKL 364
+ + G LM +P V KV EE+ +V+G + + K+
Sbjct: 273 TLNLFFAG-----TETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKM 327
Query: 365 KYLDAVVKETFRLHSV-PYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPL 423
Y++AV+ E R V P + RR + + + +PK T + + ++ RDP + NP
Sbjct: 328 PYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQ 387
Query: 424 EFGPEKFLND-GIASKFD----YS-------GIALAERMLMFVLASLLHSFDWKLPAGTK 471
+F P+ FLN+ G K D +S G LA L +++ +F K K
Sbjct: 388 DFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPK 447
Query: 472 -LDLSEK 477
+D+S K
Sbjct: 448 DIDVSPK 454
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/492 (22%), Positives = 198/492 (40%), Gaps = 64/492 (13%)
Query: 12 VKKSRKANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVS 71
+ K + KLPPGP LP IG L T ++ + +++ YGP+F + LG + VV+
Sbjct: 1 MAKKTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLC 60
Query: 72 SPSLVKQVVRDQDITFANRDPPIAGLVASFG----GNDILFSNYGPEWRKLRKLFMGKLM 127
VK+ + DQ F+ R G A+F G + FSN G ++LR+ + L
Sbjct: 61 GHDAVKEALVDQAEEFSGR-----GEQATFDWLFKGYGVAFSN-GERAKQLRRFSIATLR 114
Query: 128 SNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALEL 187
R QE + D G ID T VI ++++G+ +
Sbjct: 115 GFGVGKRGIEERIQEEAGFLIDALRGTH---GANIDPTFFLSRTVSNVISSIVFGDRFDY 171
Query: 188 REKGISNLGAEIKFKLAELVVLMGT-----PNISDIIPVLSWL--DIQGIEKRTKKISLC 240
+K L+ L +++G+ + + + S + + G +++ K
Sbjct: 172 EDKEF----------LSLLRMMLGSFQFTATSTGQLYEMFSSVMKHLPGPQQQAFKELQG 221
Query: 241 FENFIDSAVEQYRNKVSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKA 300
E+FI VE + + +DF E+ + + LK
Sbjct: 222 LEDFIAKKVEHNQRTLD------------PNSPRDFIDSFLIRMQEEEKNPN-TEFYLKN 268
Query: 301 LLVNFIVIVLTGHNFWWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMDSCVEEFH 360
L++ + + G LM +P V KV EE+ +V+G + +
Sbjct: 269 LVMTTLNLFFAG-----TETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFED 323
Query: 361 LPKLKYLDAVVKETFRLHSV-PYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIW 419
K+ Y +AV+ E R + P + R ++ + + +PK T + + ++ RDP+ +
Sbjct: 324 RAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFF 383
Query: 420 DNPLEFGPEKFLND-------------GIASKFDYSGIALAERMLMFVLASLLHSFDWKL 466
NP +F P+ FL+ I ++ + G LA L +++ +F +K
Sbjct: 384 SNPRDFNPQHFLDKKGQFKKSDAFVPFSIGKRYCF-GEGLARMELFLFFTTIMQNFRFKS 442
Query: 467 PAGTK-LDLSEK 477
P K +D+S K
Sbjct: 443 PQSPKDIDVSPK 454
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/473 (22%), Positives = 188/473 (39%), Gaps = 47/473 (9%)
Query: 12 VKKSRKANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVS 71
+ K + KLPPGP LPV+G L + L ++F L YG +F ++LG++ VV+
Sbjct: 1 MAKKTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLC 60
Query: 72 SPSLVKQVVRDQDITFANRDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNAS 131
+++ + DQ F+ R IA + F G ++F+N G WR LR+ + +
Sbjct: 61 GTDAIREALVDQAEAFSGRG-KIAVVDPIFQGYGVIFAN-GERWRALRRFSLATMRDFGM 118
Query: 132 LDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREKG 191
R QE + + +K G +D L S +I ++++G+ + ++
Sbjct: 119 GKRSVEERIQEEARCLVEELRKSK---GALLDNTLLFHSITSNIICSIVFGKRFDYKDPV 175
Query: 192 ISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWL--DIQGIEKRTKKISLCFENFIDSAV 249
L L + + S + + S G ++ + FI +V
Sbjct: 176 FLRL-----LDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSV 230
Query: 250 EQYRNKVSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKALLVNFIVIV 309
E++R + +DF + S S S + L++ + +
Sbjct: 231 EKHRATLD------------PSNPRDFIDVYLLRMEKDKSDPS-SEFHHQNLILTVLSLF 277
Query: 310 LTGHNFWWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDA 369
G ++ P V ++VQ+E+ QV+G K+ Y DA
Sbjct: 278 FAG-----TETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDA 332
Query: 370 VVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPE 428
V+ E RL +P+ VP ++ + GY +PK+T + + + DP+ ++ P F P
Sbjct: 333 VIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPG 392
Query: 429 KFLNDGIASKFDYS--------------GIALAERMLMFVLASLLHSFDWKLP 467
FL+ A K + GIA E L F ++L +F P
Sbjct: 393 HFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFF--TTILQNFSIASP 443
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 187/474 (39%), Gaps = 49/474 (10%)
Query: 12 VKKSRKANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVS 71
+ K + KLPPGP LPV+G L + L ++F L YG +F ++LG++ VV+
Sbjct: 1 MAKKTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLC 60
Query: 72 SPSLVKQVVRDQDITFANRDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNAS 131
+++ + DQ F+ R IA + F G ++F+N G WR LR+ + +
Sbjct: 61 GTDAIREALVDQAEAFSGRG-KIAVVDPIFQGYGVIFAN-GERWRALRRFSLATMRDFGM 118
Query: 132 LDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREKG 191
R QE + + +K G +D L S +I ++++G+ + ++
Sbjct: 119 GKRSVEERIQEEARCLVEELRKSK---GALLDNTLLFHSITSNIICSIVFGKRFDYKDP- 174
Query: 192 ISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLD-----IQGIEKRTKKISLCFENFID 246
+ +L +L + S V G ++ + FI
Sbjct: 175 -------VFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIG 227
Query: 247 SAVEQYRNKVSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKALLVNFI 306
+VE++R + +DF + S S S + L++ +
Sbjct: 228 QSVEKHRATLD------------PSNPRDFIDVYLLRMEKDKSDPS-SEFHHQNLILTVL 274
Query: 307 VIVLTGHNFWWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKY 366
+ G ++ P V ++VQ+E+ QV+G K+ Y
Sbjct: 275 SLFFAG-----TETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPY 329
Query: 367 LDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
DAV+ E RL +P+ VP ++ + GY +PK+T + + + DP+ ++ P F
Sbjct: 330 TDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTF 389
Query: 426 GPEKFL--------NDGIA----SKFDYSGIALAERMLMFVLASLLHSFDWKLP 467
P FL N+G K +G +A L ++L +F P
Sbjct: 390 NPGHFLDANGALKRNEGFMPFSLGKRICAGEGIARTELFLFFTTILQNFSIASP 443
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 188/476 (39%), Gaps = 53/476 (11%)
Query: 12 VKKSRKANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVS 71
+ K + KLPPGP LPV+G L + L ++F L YG +F ++LG++ VV+
Sbjct: 1 MAKKTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLC 60
Query: 72 SPSLVKQVVRDQDITFANRDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNAS 131
+++ + DQ F+ R IA + F G ++F+N G WR LR+ + +
Sbjct: 61 GTDAIREALVDQAEAFSGRG-KIAVVDPIFQGYGVIFAN-GERWRALRRFSLATMRDFGM 118
Query: 132 LDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREKG 191
R QE + + +K G +D L S +I ++++G+ + ++
Sbjct: 119 GKRSVEERIQEEARCLVEELRKSK---GALLDNTLLFHSITSNIICSIVFGKRFDYKDP- 174
Query: 192 ISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLD-----IQGIEKRTKKISLCFENFID 246
+ +L +L + S V G ++ + FI
Sbjct: 175 -------VFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIG 227
Query: 247 SAVEQYRNKVSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKALLVNFI 306
+VE++R + +DF + S S S + L++ +
Sbjct: 228 QSVEKHRATLD------------PSNPRDFIDVYLLRMEKDKSDPS-SEFHHQNLILTVL 274
Query: 307 VIVLTGHNFWWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKY 366
+ G ++ P V ++VQ+E+ QV+G K+ Y
Sbjct: 275 SLFFAG-----TETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPY 329
Query: 367 LDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
DAV+ E RL +P+ VP ++ + GY +PK+T + + + DP+ ++ P F
Sbjct: 330 TDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTF 389
Query: 426 GPEKFLNDGIASKFDYS--------------GIALAERMLMFVLASLLHSFDWKLP 467
P FL+ A K + GIA E L F ++L +F P
Sbjct: 390 NPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFF--TTILQNFSIASP 443
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 188/476 (39%), Gaps = 53/476 (11%)
Query: 12 VKKSRKANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVS 71
+ K + KLPPGP LPV+G L + L ++F L YG +F ++LG++ VV+
Sbjct: 1 MAKKTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLC 60
Query: 72 SPSLVKQVVRDQDITFANRDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNAS 131
+++ + DQ F+ R IA + F G ++F+N G WR LR+ + +
Sbjct: 61 GTDAIREALVDQAEAFSGRG-KIAVVDPIFQGYGVIFAN-GERWRALRRFSLATMRDFGM 118
Query: 132 LDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREKG 191
R QE + + +K G +D L S +I ++++G+ + ++
Sbjct: 119 GKRSVEERIQEEARCLVEELRKSK---GALLDNTLLFHSITSNIICSIVFGKRFDYKDP- 174
Query: 192 ISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLD-----IQGIEKRTKKISLCFENFID 246
+ +L +L + S V G ++ + FI
Sbjct: 175 -------VFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIG 227
Query: 247 SAVEQYRNKVSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKALLVNFI 306
+VE++R + +DF + S S S + L++ +
Sbjct: 228 QSVEKHRATLD------------PSNPRDFIDVYLLRMEKDKSDPS-SEFHHQNLILTVL 274
Query: 307 VIVLTGHNFWWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKY 366
+ G ++ P V ++VQ+E+ QV+G K+ Y
Sbjct: 275 SLFFAG-----TETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPY 329
Query: 367 LDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
DAV+ E RL +P+ VP ++ + GY +PK+T + + + DP+ ++ P F
Sbjct: 330 TDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTF 389
Query: 426 GPEKFLNDGIASKFDYS--------------GIALAERMLMFVLASLLHSFDWKLP 467
P FL+ A K + GIA E L F ++L +F P
Sbjct: 390 NPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFF--TTILQNFSIASP 443
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 188/476 (39%), Gaps = 53/476 (11%)
Query: 12 VKKSRKANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVS 71
+ K + KLPPGP LPV+G L + L ++F L YG +F ++LG++ VV+
Sbjct: 1 MAKKTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLC 60
Query: 72 SPSLVKQVVRDQDITFANRDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNAS 131
+++ + DQ F+ R IA + F G ++F+N G WR LR+ + +
Sbjct: 61 GTDAIREALVDQAEAFSGRG-KIAVVDPIFQGYGVIFAN-GERWRALRRFSLATMRDFGM 118
Query: 132 LDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREKG 191
R QE + + +K G +D L S +I ++++G+ + ++
Sbjct: 119 GKRSVEERIQEEARCLVEELRKSK---GALLDNTLLFHSITSNIICSIVFGKRFDYKDP- 174
Query: 192 ISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLD-----IQGIEKRTKKISLCFENFID 246
+ +L +L + S V G ++ + FI
Sbjct: 175 -------VFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIG 227
Query: 247 SAVEQYRNKVSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKALLVNFI 306
+VE++R + +DF + S S S + L++ +
Sbjct: 228 QSVEKHRATLD------------PSNPRDFIDVYLLRMEKDKSDPS-SEFHHQNLILTVL 274
Query: 307 VIVLTGHNFWWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKY 366
+ G ++ P V ++VQ+E+ QV+G K+ Y
Sbjct: 275 SLFAAG-----TETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPY 329
Query: 367 LDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
DAV+ E RL +P+ VP ++ + GY +PK+T + + + DP+ ++ P F
Sbjct: 330 TDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTF 389
Query: 426 GPEKFLNDGIASKFDYS--------------GIALAERMLMFVLASLLHSFDWKLP 467
P FL+ A K + GIA E L F ++L +F P
Sbjct: 390 NPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFF--TTILQNFSIASP 443
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/486 (21%), Positives = 206/486 (42%), Gaps = 56/486 (11%)
Query: 28 GLPVIGYLPFLGTT-DLHKTFT----ELAGAYGPIFKLWLGNKLCVVVSSPSLVKQV-VR 81
G+P LPFLG HK F E YG ++ + G + + ++ P ++K V V+
Sbjct: 17 GIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVK 76
Query: 82 DQDITFANRDP--PIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALR 139
+ F NR P P+ + ++ + EW++LR L + ++ L +
Sbjct: 77 ECYSVFTNRRPFGPVGFMKSAISIAE------DEEWKRLRSL-LSPTFTSGKLKEMVPII 129
Query: 140 KQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALEL----REKGISNL 195
Q ++R+L +TG KP+ + ++ + + VI + +G ++ ++ + N
Sbjct: 130 AQYGDVLVRNLRREAETG--KPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENT 187
Query: 196 GAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNK 255
++F + L T +IP+L L+I + NF+ +V++ +
Sbjct: 188 KKLLRFDFLDPFFLSIT-VFPFLIPILEVLNICVFPREVT-------NFLRKSVKRMKES 239
Query: 256 VSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKALLVNFIVIVLTGHNF 315
DF ++++ S + L+ L+ I+ + G+
Sbjct: 240 ---------RLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLE-LVAQSIIFIFAGYE- 288
Query: 316 WWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETF 375
EL +P V +K+QEE+ V+ + + +++YLD VV ET
Sbjct: 289 ----TTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETL 344
Query: 376 RLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKF----- 430
RL + + R + I G +PK +++ +A+HRDP+ W P +F PE+F
Sbjct: 345 RLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNK 404
Query: 431 --LNDGIASKF-----DYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKFGILIK 483
++ I + F + G+ A + L +L +F +K T++ L G L++
Sbjct: 405 DNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQ 464
Query: 484 KKEPLV 489
++P+V
Sbjct: 465 PEKPVV 470
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/486 (21%), Positives = 206/486 (42%), Gaps = 56/486 (11%)
Query: 28 GLPVIGYLPFLGTT-DLHKTFT----ELAGAYGPIFKLWLGNKLCVVVSSPSLVKQV-VR 81
G+P LPFLG HK F E YG ++ + G + + ++ P ++K V V+
Sbjct: 16 GIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVK 75
Query: 82 DQDITFANRDP--PIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALR 139
+ F NR P P+ + ++ + EW++LR L + ++ L +
Sbjct: 76 ECYSVFTNRRPFGPVGFMKSAISIAE------DEEWKRLRSL-LSPTFTSGKLKEMVPII 128
Query: 140 KQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALEL----REKGISNL 195
Q ++R+L +TG KP+ + ++ + + VI + +G ++ ++ + N
Sbjct: 129 AQYGDVLVRNLRREAETG--KPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENT 186
Query: 196 GAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNK 255
++F + L T +IP+L L+I + NF+ +V++ +
Sbjct: 187 KKLLRFDFLDPFFLSIT-VFPFLIPILEVLNICVFPREVT-------NFLRKSVKRMKES 238
Query: 256 VSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKALLVNFIVIVLTGHNF 315
DF ++++ S + L+ L+ I+ + G+
Sbjct: 239 ---------RLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLE-LVAQSIIFIFAGYE- 287
Query: 316 WWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETF 375
EL +P V +K+QEE+ V+ + + +++YLD VV ET
Sbjct: 288 ----TTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETL 343
Query: 376 RLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKF----- 430
RL + + R + I G +PK +++ +A+HRDP+ W P +F PE+F
Sbjct: 344 RLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNK 403
Query: 431 --LNDGIASKF-----DYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKFGILIK 483
++ I + F + G+ A + L +L +F +K T++ L G L++
Sbjct: 404 DNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQ 463
Query: 484 KKEPLV 489
++P+V
Sbjct: 464 PEKPVV 469
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/486 (21%), Positives = 206/486 (42%), Gaps = 56/486 (11%)
Query: 28 GLPVIGYLPFLGTT-DLHKTFT----ELAGAYGPIFKLWLGNKLCVVVSSPSLVKQV-VR 81
G+P LPFLG HK F E YG ++ + G + + ++ P ++K V V+
Sbjct: 15 GIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVK 74
Query: 82 DQDITFANRDP--PIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALR 139
+ F NR P P+ + ++ + EW++LR L + ++ L +
Sbjct: 75 ECYSVFTNRRPFGPVGFMKSAISIAE------DEEWKRLRSL-LSPTFTSGKLKEMVPII 127
Query: 140 KQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALEL----REKGISNL 195
Q ++R+L +TG KP+ + ++ + + VI + +G ++ ++ + N
Sbjct: 128 AQYGDVLVRNLRREAETG--KPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENT 185
Query: 196 GAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNK 255
++F + L T +IP+L L+I + NF+ +V++ +
Sbjct: 186 KKLLRFDFLDPFFLSIT-VFPFLIPILEVLNICVFPREVT-------NFLRKSVKRMKES 237
Query: 256 VSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKALLVNFIVIVLTGHNF 315
DF ++++ S + L+ L+ I+ + G+
Sbjct: 238 ---------RLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLE-LVAQSIIFIFAGYE- 286
Query: 316 WWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETF 375
EL +P V +K+QEE+ V+ + + +++YLD VV ET
Sbjct: 287 ----TTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETL 342
Query: 376 RLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKF----- 430
RL + + R + I G +PK +++ +A+HRDP+ W P +F PE+F
Sbjct: 343 RLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNK 402
Query: 431 --LNDGIASKF-----DYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKFGILIK 483
++ I + F + G+ A + L +L +F +K T++ L G L++
Sbjct: 403 DNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQ 462
Query: 484 KKEPLV 489
++P+V
Sbjct: 463 PEKPVV 468
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 336 PRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSI 394
P V +VQ EL QVVG D P L Y+ A + E R S VP +P + ++S+
Sbjct: 310 PDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSV 369
Query: 395 GGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLN-DGIASKFDYS----------- 442
GY +PKDT + +N W+++ DP W NP F P +FL+ DG+ +K S
Sbjct: 370 LGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRR 429
Query: 443 --GIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKFGILIKKK 485
G L++ L ++ L H D++ ++ +G+ IK K
Sbjct: 430 CIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYGLTIKPK 474
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 23 PPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRD 82
PPGP P+IG +G H +F LA YG +F++ LG+ VV++ + Q +
Sbjct: 11 PPGPFAWPLIGNAAAVGQA-AHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQ 69
Query: 83 QDITFANRDPPIAGLVASFGGNDILFSNYGPEWRKLRK 120
Q FA+R P A GG + F +Y W+ R+
Sbjct: 70 QGSAFADR-PSFASFRVVSGGRSMAFGHYSEHWKVQRR 106
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 187/463 (40%), Gaps = 60/463 (12%)
Query: 19 NAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQ 78
N LPP V G+L L +L L GP+++L LG + VV++S +++
Sbjct: 27 NLHLPPL-----VPGFLHLL-QPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEE 80
Query: 79 VVRDQDITFANRDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLM--SNASLDACY 136
+ + + FA R + + S DI +Y W+ +KL L+ + +S++
Sbjct: 81 AMIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRSSMEPW- 139
Query: 137 ALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVC-VIQNMLWGEALELREKGISNL 195
V + ++ + G P+ + + S C +I + +G + +
Sbjct: 140 ------VDQLTQEFCERMRVQAGAPVTI-QKEFSLLTCSIICYLTFGNKEDTLVHAFHDC 192
Query: 196 GAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQY--R 253
++ + I D++P L + G+ + + I EN D VE+ R
Sbjct: 193 VQDLMKTWDHWSI-----QILDMVPFLRFFPNPGLWRLKQAI----ENR-DHMVEKQLRR 242
Query: 254 NKVSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQLKALLVNFIV--IVLT 311
+K S+V D+ E+ + + +V+ + T
Sbjct: 243 HKESMVAGQWRDMT-------DYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETT 295
Query: 312 GHNFWWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMD-SC--VEEFHLPKLKYLD 368
W L+H+P + +++QEEL + +G SC V +L L+
Sbjct: 296 ASTLSW----------AVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLN 345
Query: 369 AVVKETFRLHSV-PYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGP 427
A + E RL V P +P R ++ SSI GY +P+ +I N+ H D +W+ P EF P
Sbjct: 346 ATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRP 405
Query: 428 EKFLNDGI---ASKFDYS-----GIALAERMLMFVLASLLHSF 462
++FL G A F G +LA L VLA LL +F
Sbjct: 406 DRFLEPGANPSALAFGCGARVCLGESLARLELFVVLARLLQAF 448
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/483 (20%), Positives = 195/483 (40%), Gaps = 73/483 (15%)
Query: 38 LGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGL 97
+G L F + A YGP+ ++ + +K V+V+SP VK+ + T N+D +
Sbjct: 7 VGGRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMS---TKYNKDSKMYRA 63
Query: 98 VAS------FGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLY 151
+ + FG + NY W K R++ + S +SL + ++ + ++ L
Sbjct: 64 LQTVFGERLFGQGLVSECNY-ERWHKQRRV-IDLAFSRSSLVSLMETFNEKAEQLVEILE 121
Query: 152 NNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREKGISNLGAEIKFKLAELVVLMG 211
G+ +S +Q+ML A+++ A+ F + ++L
Sbjct: 122 AKAD---------GQTPVS-----MQDMLTYTAMDIL--------AKAAFGMETSMLLGA 159
Query: 212 TPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVSVVXXXXXXXXXXXX 271
+S + ++ ++GI ++ F+ +Q R +
Sbjct: 160 QKPLSQAVKLM----LEGITASRNTLA----KFLPGKRKQLREVRESIRFLRQVGRDWVQ 211
Query: 272 XXKDFXXXXXXXXXNEDSASSISTIQLKA---------LLVNFIVIVLTGHNFWWNRHXX 322
++ E+ + I T LKA LL NF+ + GH N
Sbjct: 212 RRRE------ALKRGEEVPADILTQILKAEEGAQDDEGLLDNFVTFFIAGHETSANH--- 262
Query: 323 XXXXXXXXELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPY 382
EL P ++ ++Q E+ +V+G ++ L +L+YL V+KE+ RL+ +
Sbjct: 263 --LAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPPAW 320
Query: 383 LVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLNDGIASKFDYS 442
R + + I G VP +T ++ + + + R +++PL F P++F +F Y
Sbjct: 321 GTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPKPRFTYF 380
Query: 443 GIALAERMLM----------FVLASLLHSFDWKLPAGTKLDLSEKFGILIKKKEPLVAIP 492
+L R + V+A LL +++L G + L E+ +K +P++
Sbjct: 381 PFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQRFGLQEQ--ATLKPLDPVLCTL 438
Query: 493 TPR 495
PR
Sbjct: 439 RPR 441
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 92/442 (20%), Positives = 164/442 (37%), Gaps = 47/442 (10%)
Query: 47 FTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLVASFG--GN 104
F +L +G +F L L VV++ + V++ + A+R P + FG
Sbjct: 36 FDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQ 95
Query: 105 DILFSNYGPEWRKLRKLFMGKL----MSNASLDACYALRKQEVKNIIRDLYNNNKTGIGK 160
+ + YGP WR+ R+ + L + SL+ +E + N++ G+
Sbjct: 96 GVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVT---EEAACLCAAFANHS----GR 148
Query: 161 PIDVGELSISTFVCVIQNMLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIP 220
P L VI ++ G E + L + L E + + + +P
Sbjct: 149 PFRPNGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLR--EVLNAVP 206
Query: 221 VLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVSVVXXXXXXXXXXXXXXKDFXXXX 280
VL L I + + + F +D + ++R + F
Sbjct: 207 VL--LHIPALAGKVLRFQKAFLTQLDELLTEHR-------MTWDPAQPPRDLTEAFLAEM 257
Query: 281 XXXXXNEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHXXXXXXXXXXELMHNPRVMK 340
N +S+ + +++ + +V T W ++ +P V +
Sbjct: 258 EKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWG----------LLLMILHPDVQR 307
Query: 341 KVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTV 399
+VQ+E+ V+G E + Y AV+ E R VP V S+ + G+ +
Sbjct: 308 RVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRI 367
Query: 400 PKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLNDG------------IASKFDYSGIALA 447
PK TT+I N+ ++ +D +W+ P F PE FL+ A + G LA
Sbjct: 368 PKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLA 427
Query: 448 ERMLMFVLASLLHSFDWKLPAG 469
L SLL F + +P G
Sbjct: 428 RMELFLFFTSLLQHFSFSVPTG 449
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 93/449 (20%), Positives = 172/449 (38%), Gaps = 48/449 (10%)
Query: 45 KTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLVASFGGN 104
K+F YG +F + LG + V++ +++ + D+ F+ R IA + F G
Sbjct: 34 KSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGK-IAMVDPFFRGY 92
Query: 105 DILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDV 164
++F+N G W+ LR+ + + R QE + + +K + P +
Sbjct: 93 GVIFAN-GNRWKVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGALMDPTFL 151
Query: 165 GELSISTFVCVIQNMLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLSW 224
+ + +C I ++G+ +++ + + ++ L+ + + + S
Sbjct: 152 FQSITANIICSI---VFGKRFHYQDQEFLKM-LNLFYQTFSLI----SSVFGQLFELFSG 203
Query: 225 L--DIQGIEKRTKKISLCFENFIDSAVEQYRNKVSVVXXXXXXXXXXXXXXKDFXXXXXX 282
G ++ K +I +VE++R + K+
Sbjct: 204 FLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKE------- 256
Query: 283 XXXNEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHXXXXXXXXXXELMHNPRVMKKV 342
N S S + L L + F T + ++ P V ++V
Sbjct: 257 -KSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYG----------FLLMLKYPHVAERV 305
Query: 343 QEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSV-PYLVPRRASQSSSIGGYTVPK 401
E+ QV+G E K+ Y +AV+ E R + P VP +Q +S GY +PK
Sbjct: 306 YREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPK 365
Query: 402 DTTIILNVWAIHRDPQIWDNPLEFGPEKFLN-DGIASKFDY-------------SGIALA 447
DT + L + DP ++ P F P+ FL+ +G K + GIA A
Sbjct: 366 DTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARA 425
Query: 448 ERMLMFVLASLLHSFDWKLP-AGTKLDLS 475
E L F ++L +F P A +DL+
Sbjct: 426 ELFLFFT--TILQNFSMASPVAPEDIDLT 452
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 336 PRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSI 394
P + +VQ+E+ ++G + K+ Y +AV+ E R + VP + S+ + +
Sbjct: 304 PNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVV 363
Query: 395 GGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLNDG--IASKFDYSGIALAE---- 448
GY++PK TT+I N++++H D + W +P F PE+FL+ A K +L
Sbjct: 364 RGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCL 423
Query: 449 -----RMLMFV-LASLLHSFDWKLPAGTKLDLSEKFGILIKKKEPLVA 490
RM MF+ +LL F P DL + G+ ++ + L+
Sbjct: 424 GEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQPYLIC 471
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 10/155 (6%)
Query: 44 HKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDP-PIAGLVASFG 102
H + + YG IF L LG VV++ +VK+ + Q FA+R P+ + G
Sbjct: 37 HVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMG 96
Query: 103 GNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNN--KTGIGK 160
G +L S YG W R+L + N+ Y + E K + + N+ +T G+
Sbjct: 97 G--LLNSRYGRGWVDHRRLAV-----NSFRYFGYGQKSFESKILEETKFFNDAIETYKGR 149
Query: 161 PIDVGELSISTFVCVIQNMLWGEALELREKGISNL 195
P D +L + + +++GE + ++
Sbjct: 150 PFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHM 184
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Query: 336 PRVMKKVQEELAQVVGM-------DSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRR 387
P + +VQ+E+ ++G D C K+ Y +AV+ E R + VP +
Sbjct: 304 PNIQGQVQKEIDLIMGPNGKPSWDDKC-------KMPYTEAVLHEVLRFCNIVPLGIFHA 356
Query: 388 ASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLNDG--IASKFDYSGIA 445
S+ + + GY++PK TT+I N++++H D + W +P F PE+FL+ A K +
Sbjct: 357 TSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFS 416
Query: 446 LAE---------RMLMFV-LASLLHSFDWKLPAGTKLDLSEKFGILIKKKEPLVA 490
L RM MF+ +LL F P DL + G+ ++ + L+
Sbjct: 417 LGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQPYLIC 471
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 10/155 (6%)
Query: 44 HKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDP-PIAGLVASFG 102
H + + YG IF L LG VV++ +VK+ + Q FA+R P+ + G
Sbjct: 37 HVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMG 96
Query: 103 GNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNN--KTGIGK 160
G +L S YG W R+L + N+ Y + E K + + N+ +T G+
Sbjct: 97 G--LLNSRYGRGWVDHRRLAV-----NSFRYFGYGQKSFESKILEETKFFNDAIETYKGR 149
Query: 161 PIDVGELSISTFVCVIQNMLWGEALELREKGISNL 195
P D +L + + +++GE + ++
Sbjct: 150 PFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHM 184
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Query: 335 NPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSS 393
+P V ++VQ+E+ V+G E + Y AV+ E R VP + S+
Sbjct: 302 HPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIE 361
Query: 394 IGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLNDG------------IASKFDY 441
+ G+ +PK TT+I N+ ++ +D +W+ P F PE FL+ A +
Sbjct: 362 VQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRAC 421
Query: 442 SGIALAERMLMFVLASLLHSFDWKLPAG 469
G LA L SLL F + +P G
Sbjct: 422 LGEPLARMELFLFFTSLLQHFSFSVPTG 449
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 47 FTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLVASFG--GN 104
F +L +G +F L L VV++ + V++ + A+R P + FG
Sbjct: 36 FDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQ 95
Query: 105 DILFSNYGPEWRKLRKLFMGKL 126
+ + YGP WR+ R+ + L
Sbjct: 96 GVFLARYGPAWREQRRFSVSTL 117
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L +P ++++E+ V G E + KL++ V+ E RL +++ RRA
Sbjct: 290 LADHPEHADRIRDEVEAVTGGRPVAFE-DVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAE 348
Query: 392 SSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLNDGIASKFDYS 442
S +GGY +P II + +AI RDP+ +D+ LEF P+++L + A+ Y+
Sbjct: 349 SELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYA 399
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 286 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 344
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K I++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 345 TVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 404
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 405 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 464
Query: 492 PTPRLPNS 499
P+P S
Sbjct: 465 PSPSTEQS 472
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 12 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 71
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 72 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 117
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 14 KSRKANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSP 73
K + KLPPGP LP+IG + + D+ K+FT + YGP+F ++ G VV
Sbjct: 3 KKTSSKGKLPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGY 62
Query: 74 SLVKQVVRDQDITFANR-DPPIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKL 126
VK+ + D F+ R + PI+ + G I+ SN G W+++R+ + L
Sbjct: 63 EAVKEALIDNGEEFSGRGNSPISQRITK--GLGIISSN-GKRWKEIRRFSLTTL 113
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 19/147 (12%)
Query: 335 NPRVMKKVQEELAQVVGMDS--CVEE-FHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQ 390
+P V KVQEE+ V+G C+++ H+P Y DAVV E R VP VP +
Sbjct: 298 HPEVTAKVQEEIDHVIGRHRSPCMQDRSHMP---YTDAVVHEIQRYSDLVPTGVPHAVTT 354
Query: 391 SSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLN-DGIASKFDY-------- 441
+ Y +PK TTI+ + ++ D + + NP F P FL+ +G K DY
Sbjct: 355 DTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDYFMPFSAGK 414
Query: 442 ---SGIALAERMLMFVLASLLHSFDWK 465
+G LA L L ++L +F+ K
Sbjct: 415 RICAGEGLARMELFLFLTTILQNFNLK 441
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 399 ACIGKQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 492 PTPRLPNS 499
P+P S
Sbjct: 459 PSPSTEQS 466
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 492 PTPRLPNS 499
P+P S
Sbjct: 459 PSPSTEQS 466
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 492 PTPRLPNS 499
P+P S
Sbjct: 459 PSPSTEQS 466
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 492 PTPRLPNS 499
P+P S
Sbjct: 459 PSPSTEQS 466
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 492 PTPRLPNS 499
P+P S
Sbjct: 459 PSPSTEQS 466
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 283 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKED 341
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 342 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 401
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 402 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 461
Query: 492 PTPRLPNS 499
P+P S
Sbjct: 462 PSPSTEQS 469
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 9 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 68
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 69 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 114
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 492 PTPRLPNS 499
P+P S
Sbjct: 459 PSPSTEQS 466
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 281 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 339
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 340 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 399
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 400 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 459
Query: 492 PTPRLPNS 499
P+P S
Sbjct: 460 PSPSTEQS 467
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 66
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 67 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 112
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 492 PTPRLPNS 499
P+P S
Sbjct: 459 PSPSTEQS 466
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 283 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 341
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 342 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 401
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 402 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 461
Query: 492 PTPRLPNS 499
P+P S
Sbjct: 462 PSPSTEQS 469
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 9 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 68
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 69 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 114
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 492 PTPRLPNS 499
P+P S
Sbjct: 459 PSPSTEQS 466
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 492 PTPRLPNS 499
P+P S
Sbjct: 459 PSPSTEQS 466
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 492 PTPRLPNS 499
P+P S
Sbjct: 459 PSPSTEQS 466
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 492 PTPRLPNS 499
P+P S
Sbjct: 459 PSPSTEQS 466
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 492 PTPRLPNS 499
P+P S
Sbjct: 459 PSPSTEQS 466
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 21/183 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 281 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 339
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 340 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 399
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 400 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLLLKPEGFVVKAKSKKIPLGGI 459
Query: 492 PTP 494
P+P
Sbjct: 460 PSP 462
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 3/108 (2%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLIKEACDES 66
Query: 84 DITFANRDPPIAGLVASFGGNDILFS-NYGPEWRKLRKLFMGKLMSNA 130
F V F G+ +L S + W+K + + A
Sbjct: 67 --RFDKNLSQALKFVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQA 112
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 85/188 (45%), Gaps = 21/188 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDY-------- 441
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + +
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 442 --SGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
G A VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 399 ACEGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 492 PTPRLPNS 499
P+P S
Sbjct: 459 PSPSTEQS 466
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 21/183 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 281 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 339
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 340 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 399
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 400 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 459
Query: 492 PTP 494
P+P
Sbjct: 460 PSP 462
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 21/183 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLLLKPEGFVVKAKSKKIPLGGI 458
Query: 492 PTP 494
P+P
Sbjct: 459 PSP 461
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 3/108 (2%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFS-NYGPEWRKLRKLFMGKLMSNA 130
F V F G+ +L S + W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 85/188 (45%), Gaps = 21/188 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 281 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 339
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYS------- 442
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + +
Sbjct: 340 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 399
Query: 443 ---GIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
G A VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 400 ACPGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 459
Query: 492 PTPRLPNS 499
P+P S
Sbjct: 460 PSPSTEQS 467
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 66
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 67 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 112
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 21/183 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 281 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKED 339
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 340 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 399
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 400 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLVLKPEGFVVKAKSKKIPLGGI 459
Query: 492 PTP 494
P+P
Sbjct: 460 PSP 462
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 66
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 67 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 112
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 21/183 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLVLKPEGFVVKAKSKKIPLGGI 458
Query: 492 PTP 494
P+P
Sbjct: 459 PSP 461
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 281 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKED 339
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 340 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 399
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 400 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 459
Query: 492 PTPRLPNS 499
P+P S
Sbjct: 460 PSPSTEQS 467
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 66
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 67 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 112
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 283 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKED 341
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 342 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 401
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 402 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 461
Query: 492 PTPRLPNS 499
P+P S
Sbjct: 462 PSPSTEQS 469
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 9 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 68
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 69 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 114
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 21/183 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E R+ A +
Sbjct: 281 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRIWPTAPAFSLYAKED 339
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD +W D+ EF PE+F N + + +R
Sbjct: 340 TMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 399
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G +IK KK PL I
Sbjct: 400 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIEETLTLKPKGFVIKAKSKKIPLGGI 459
Query: 492 PTP 494
P+P
Sbjct: 460 PSP 462
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 66/154 (42%), Gaps = 13/154 (8%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVR-- 81
P P+ + LP L T + ++A G IFK ++ +SS LVK+
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYISSQRLVKEACDES 66
Query: 82 --DQDITFANRDPPIAGLVASFGGNDILFS-NYGPEWRKLRKLFMGKLMSNASLDACYAL 138
D++++ A + V F G+ + S + W+K R + + +L S ++ +A+
Sbjct: 67 RFDKNLSQARK------FVRDFAGDGLATSWTHEKNWKKARNILLPRL-SQQAMKGYHAM 119
Query: 139 RKQEVKNIIRDLYN-NNKTGIGKPIDVGELSIST 171
+++ N+ I P D+ L++ T
Sbjct: 120 MVDIAVQLVQKWERLNSDEHIEVPEDMTRLTLDT 153
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 21/183 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETQLLKPEGFVVKAKSKKIPLGGI 458
Query: 492 PTP 494
P+P
Sbjct: 459 PSP 461
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 3/108 (2%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFS-NYGPEWRKLRKLFMGKLMSNA 130
F V F G+ +L S + W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 21/183 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP ++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 281 LVKNPHELQKAAEEAARVL-VDPVPSHKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 339
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD +W D+ EF PE+F N + + +R
Sbjct: 340 TVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 399
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 400 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 459
Query: 492 PTP 494
P+P
Sbjct: 460 PSP 462
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 21/183 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP ++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHELQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Query: 492 PTP 494
P+P
Sbjct: 459 PSP 461
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 13/113 (11%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVR-- 81
P P+ + LP L T + ++A G IFK ++ +SS L+K+
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 82 --DQDITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
D++++ A + V F G D LF+++ E W+K + + A
Sbjct: 66 RFDKNLSQAPK------FVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++KV EE +V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKVAEEATRVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIKKK 485
+ VL +L FD++ +LD+ E G ++K K
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAK 449
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIK---KKEPLVAI 491
+ VL +L FD++ +LD+ E G ++K KK PL I
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGI 458
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIKKK 485
+ VL +L FD++ +LD+ E G ++K K
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAK 449
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIKKK 485
+ VL +L FD++ +LD+ E G ++K K
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAK 449
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIKKK 485
+ VL +L FD++ +LD+ E G ++K K
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAK 449
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIKKK 485
+ VL +L FD++ +LD+ E G ++K K
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAK 449
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIKKK 485
+ VL +L FD++ +LD+ E G ++K K
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAK 449
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPAGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIKKK 485
+ VL +L FD++ +LD+ E G ++K K
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAK 449
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYS------- 442
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + +
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPWGNGQR 398
Query: 443 ---GIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKF-----GILIKKK 485
G A VL +L FD++ +LD+ E G ++K K
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAK 449
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYSGIALAER 449
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + + +R
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPYGNGQR 398
Query: 450 MLM----------FVLASLLHSFDWKLPAGTKLDLSEKF-----GILIKKK 485
+ VL +L FD++ +LD+ E G ++K K
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAK 449
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L+ NP V++K EE A+V+ +D + +LKY+ V+ E RL A +
Sbjct: 280 LVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 338
Query: 392 SSIGG-YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDGIASKFDYS------- 442
+ +GG Y + K +++ + +HRD IW D+ EF PE+F N + +
Sbjct: 339 TVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPHGNGQR 398
Query: 443 ---GIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKF-----GILIKKK 485
G A VL +L FD++ +LD+ E G ++K K
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAK 449
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ 83
P P+ + LP L T + ++A G IFK ++ +SS L+K+ +
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 84 DITFANRDPPIAGLVASFGGNDILFSNYGPE--WRKLRKLFMGKLMSNA 130
F V F G D LF+++ E W+K + + A
Sbjct: 66 --RFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKAHNILLPSFSQQA 111
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 17/132 (12%)
Query: 331 ELMHNPRVMKKVQEELAQVV----------GMDSCVEEFHLPKLKYLDAVVKETFRLHSV 380
+++ NP MK EE+ + + G C+ + L L LD+++KE+ RL S
Sbjct: 283 QMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA 342
Query: 381 PYLVPRRASQSSSI----GGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLNDGIA 436
L R A + ++ G Y + KD I L +H DP+I+ +PL F +++L++
Sbjct: 343 S-LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGK 401
Query: 437 SK--FDYSGIAL 446
+K F +G+ L
Sbjct: 402 TKTTFYCNGLKL 413
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 17/132 (12%)
Query: 331 ELMHNPRVMKKVQEELAQVV----------GMDSCVEEFHLPKLKYLDAVVKETFRLHSV 380
+++ NP MK EE+ + + G C+ + L L LD+++KE+ RL S
Sbjct: 283 QMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA 342
Query: 381 PYLVPRRASQSSSI----GGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLNDGIA 436
L R A + ++ G Y + KD I L +H DP+I+ +PL F +++L++
Sbjct: 343 S-LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGK 401
Query: 437 SK--FDYSGIAL 446
+K F +G+ L
Sbjct: 402 TKTTFYCNGLKL 413
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 14/173 (8%)
Query: 335 NPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQSSSI 394
+P V + + +E+ V+G + ++ + KLK ++ + E+ R V LV R+A + I
Sbjct: 325 HPNVEEAIIKEIQTVIG-ERDIKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVI 383
Query: 395 GGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLNDGIASKFD--------YSGIAL 446
GY V K T IILN+ +HR + + P EF E F + F +G +
Sbjct: 384 DGYPVKKGTNIILNIGRMHR-LEFFPKPNEFTLENFAKNVPYRYFQPFGFGPRGCAGKYI 442
Query: 447 AERMLMFVLASLLHSFDWKLPAGTKLDLSEKFGILI----KKKEPLVAIPTPR 495
A M+ +L +LL F K G ++ +K L + K L I TPR
Sbjct: 443 AMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLEMIFTPR 495
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 13/127 (10%)
Query: 361 LPKLKYLDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWD 420
L K+ YLD V++E RL R Q G+ PK + + H DP ++
Sbjct: 298 LKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYP 357
Query: 421 NPLEFGPEKFLNDGIASK---FDYS--GIALAE-------RMLMFVLAS-LLHSFDWKLP 467
+P +F PE+F DG A+ F + G L E R+ M + A+ L+ FDW L
Sbjct: 358 DPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLL 417
Query: 468 AGTKLDL 474
G L+L
Sbjct: 418 PGQNLEL 424
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 369 AVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPE 428
AV++ET R LV R A +IG +TVPK T++L + A HRDP I P F P+
Sbjct: 291 AVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPD 350
Query: 429 K 429
+
Sbjct: 351 R 351
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 87/434 (20%), Positives = 169/434 (38%), Gaps = 50/434 (11%)
Query: 14 KSRKANAKLP-PGPRG-LPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVS 71
K+ + +++P PG G L + + G+ +H E YGPI++ LGN V +
Sbjct: 5 KTPRPYSEIPSPGDNGWLNLYHFWREKGSQRIHFRHIENFQKYGPIYREKLGNLESVYII 64
Query: 72 SPSLVKQVVRDQDITFANRD-PPIAGLVASFGGN-DILFSNYGPEWRKLRKLFMGKLMSN 129
P V + + + D PP + +LF G W+K R + ++M+
Sbjct: 65 HPEDVAHLFKFEGSYPERYDIPPWLAYHRYYQKPIGVLFKKSG-TWKKDRVVLNTEVMAP 123
Query: 130 ASLDACYALRKQEVKNIIRDLYNN-NKTGIGKPI-DVGELSISTFVCVIQNMLWGEALEL 187
++ L ++ + L+ + G GK + D+ E I N+++GE L +
Sbjct: 124 EAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGDIKEDLFHFAFESITNVMFGERLGM 183
Query: 188 REKGISN-----LGAEIKFKLAELVVLMGTPNISDIIPVLSWLDI----QGIEKRTKKIS 238
E+ ++ + A K + +L P + + +W D I + +K +
Sbjct: 184 LEETVNPEAQKFIDAVYKMFHTSVPLLNVPPELYRLFRTKTWRDHVAAWDTIFNKAEKYT 243
Query: 239 LCFENFIDSAVEQYRNKVSVVXXXXXXXXXXXXXXKDFXXXXXXXXXNEDSASSISTIQL 298
F + E +RN ++ + ED ++I+ ++
Sbjct: 244 EIFYQDLRRKTE-FRNYPGIL----------------YCLLKSEKMLLEDVKANIT--EM 284
Query: 299 KALLVNFIVIVLTGHNFWWNRHXXXXXXXXXXELMHNPRVMKKVQEELAQVVGMDSCVEE 358
A VN + L H + E+ + V + ++EE+
Sbjct: 285 LAGGVNTTSMTLQWHLY---------------EMARSLNVQEMLREEVLNARRQAEGDIS 329
Query: 359 FHLPKLKYLDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQI 418
L + L A +KET RLH + + R + Y +P T + + ++A+ RDP
Sbjct: 330 KMLQMVPLLKASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAF 389
Query: 419 WDNPLEFGPEKFLN 432
+ +P +F P ++L+
Sbjct: 390 FSSPDKFDPTRWLS 403
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 15/145 (10%)
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLH-SVPYLVPRRASQ 390
L NP+ +++ +E+ V+ + L + YL A +KE+ RL SVP+ R +
Sbjct: 310 LSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTT-RTLDK 368
Query: 391 SSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLND------------GIASK 438
+ +G Y +PK T + LN + +++ +F PE++L GI +
Sbjct: 369 PTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKINPFAHLPFGIGKR 428
Query: 439 FDYSGIALAERMLMFVLASLLHSFD 463
G LAE L L ++ +D
Sbjct: 429 M-CIGRRLAELQLHLALCWIIQKYD 452
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Query: 24 PGPRGLPVIGYLPFL----GTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQV 79
PGP P++G L + G H T E YG IF++ LG+ V + SPSL++ +
Sbjct: 27 PGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEAL 86
Query: 80 VRDQDITFANRD-PPIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLM 127
R + + P L G EW+++R F KLM
Sbjct: 87 YRTESAHPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLM 135
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 360 HLPKLKYLDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIW 419
L L LD +KET RL ++ R A ++ GYT+P + ++ R W
Sbjct: 308 QLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSW 367
Query: 420 DNPLEFGPEKFLNDGIAS--KFDY 441
L+F P+++L D AS KF Y
Sbjct: 368 VERLDFNPDRYLQDNPASGEKFAY 391
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 370 VVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEK 429
+ ET R L+PR+ SQ + +GG + KDT + + A +RDP+ ++ P F +
Sbjct: 305 AIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHR 364
Query: 430 FLNDGIASKFDYSGIALA 447
+ GI S F + LA
Sbjct: 365 -EDLGIKSAFSGAARHLA 381
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 155/422 (36%), Gaps = 48/422 (11%)
Query: 42 DLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRD--PPIAGLVA 99
++H+TF EL GPIF+ LG V V P V+++ + D R P
Sbjct: 41 EMHQTFQEL----GPIFRYNLGGPRMVCVMLPEDVEKL-QQVDSLHPCRMILEPWVAYRQ 95
Query: 100 SFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIG 159
G +F GPEWR R ++S ++ + V + RD K +
Sbjct: 96 HRGHKCGVFLLNGPEWRFNRLRLNPDVLSPKAVQRFLPM----VDAVARDFSQALKKKVL 151
Query: 160 K------PIDVGELSISTFVCVIQNM-LWGEALELREKGISNLGAEIKFKLAELVVLMGT 212
+ +DV + SI + N+ L+GE L L G S A + F A V+ T
Sbjct: 152 QNARGSLTLDV-QPSIFHYTIEASNLALFGERLGL--VGHSPSSASLNFLHALEVMFKST 208
Query: 213 PNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVSVVXXXXXXXXXXXXX 272
+ + LS + K + C + D+ +++ +++
Sbjct: 209 VQLMFMPRSLSRWISPKVWKEHFEAWDCIFQYGDNCIQKIYQELAFNRPQHYTGIVAELL 268
Query: 273 XK-DFXXXXXXXXXNEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHXXXXXXXXXXE 331
K + E +A S+ T L+ F E
Sbjct: 269 LKAELSLEAIKANSMELTAGSVDTTAFPLLMTLF-------------------------E 303
Query: 332 LMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
L NP V + +++E S + +L L A +KET RL+ V + R S
Sbjct: 304 LARNPDVQQILRQESLAAAASISEHPQKATTELPLLRAALKETLRLYPVGLFLERVVSSD 363
Query: 392 SSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLN-DGIASKFDYSGIALAERM 450
+ Y +P T + + ++++ R+ ++ P + P+++L+ G F + R
Sbjct: 364 LVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWLDIRGSGRNFHHVPFGFGMRQ 423
Query: 451 LM 452
+
Sbjct: 424 CL 425
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 366 YLDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
Y + V+E R + V RASQ G P+ ++L+++ + D W +P EF
Sbjct: 273 YAELFVQEVRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEF 332
Query: 426 GPEKF 430
PE+F
Sbjct: 333 RPERF 337
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 69/143 (48%), Gaps = 17/143 (11%)
Query: 335 NPRVMKKVQEELAQV---VGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQS 391
N R + K+ +E+ + + D+ +EE + + + +E+ R ++ R+ +
Sbjct: 284 NKRHLAKLHQEIDEFPAQLNYDNVMEE-----MPFAEQCARESIRRDPPLVMLMRKVLKP 338
Query: 392 SSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLN--DGIASKFDYSGI--ALA 447
+G Y VP+ I + H+D + + NP E+ PE+ + DG F +G+ +
Sbjct: 339 VQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPERNMKLVDGAFCGFG-AGVHKCIG 397
Query: 448 ERMLMF----VLASLLHSFDWKL 466
E+ + VLA++L +D++L
Sbjct: 398 EKFGLLQVKTVLATVLRDYDFEL 420
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 366 YLDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
Y + V+E R + V RASQ G P+ ++L+++ + D W +P EF
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEF 324
Query: 426 GPEKF 430
PE+F
Sbjct: 325 RPERF 329
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 366 YLDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
Y + V+E R + V RASQ G P+ ++L+++ + D W +P EF
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEF 324
Query: 426 GPEKF 430
PE+F
Sbjct: 325 RPERF 329
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 366 YLDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
Y + V+E R + V RASQ G P+ ++L+++ + D W +P EF
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEF 324
Query: 426 GPEKF 430
PE+F
Sbjct: 325 RPERF 329
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 366 YLDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
Y + V+E R + V RASQ G P+ ++L+++ + D W +P EF
Sbjct: 273 YAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEF 332
Query: 426 GPEKF 430
PE+F
Sbjct: 333 RPERF 337
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 367 LDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFG 426
L A +KET RLH + + R + Y +P T + + ++A+ R+P + +P F
Sbjct: 334 LKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFD 393
Query: 427 PEKFLN 432
P ++L+
Sbjct: 394 PTRWLS 399
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 366 YLDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
Y + V+E R + V RASQ G P+ ++L+++ + D W +P EF
Sbjct: 273 YAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEF 332
Query: 426 GPEKF 430
PE+F
Sbjct: 333 RPERF 337
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 367 LDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFG 426
L A +KET RLH + + R + Y +P T + + ++A+ R+P + +P F
Sbjct: 337 LKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFD 396
Query: 427 PEKFLN 432
P ++L+
Sbjct: 397 PTRWLS 402
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 24/30 (80%)
Query: 401 KDTTIILNVWAIHRDPQIWDNPLEFGPEKF 430
K T+++L+++ + DP++WD+P EF PE+F
Sbjct: 310 KGTSVLLDLYGTNHDPRLWDHPDEFRPERF 339
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%)
Query: 331 ELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQ 390
ELM + V +EL ++ G V L ++ L+ V+KET RLH ++ R A
Sbjct: 271 ELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKG 330
Query: 391 SSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKF 430
+ G+ + + + + +R P+ + +P +F P ++
Sbjct: 331 EFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARY 370
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%)
Query: 331 ELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQ 390
ELM + V +EL ++ G V L ++ L+ V+KET RLH ++ R A
Sbjct: 271 ELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKG 330
Query: 391 SSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKF 430
+ G+ + + + + +R P+ + +P +F P ++
Sbjct: 331 EFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARY 370
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%)
Query: 331 ELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQ 390
ELM + V +EL ++ G V L ++ L+ V+KET RLH ++ R A
Sbjct: 271 ELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKG 330
Query: 391 SSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKF 430
+ G+ + + + + +R P+ + +P +F P ++
Sbjct: 331 EFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARY 370
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%)
Query: 331 ELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQ 390
ELM + V +EL ++ G V L ++ L+ V+KET RLH ++ R A
Sbjct: 271 ELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKG 330
Query: 391 SSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKF 430
+ G+ + + + + +R P+ + +P +F P ++
Sbjct: 331 EFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARY 370
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 370 VVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
V+E R + P R A++ IGG +P+ +T+++ A +RDP+ + +P F
Sbjct: 277 AVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF 332
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 370 VVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
V+E R + P R A++ IGG +P+ +T+++ A +RDP+ + +P F
Sbjct: 276 AVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF 331
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 370 VVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
V+E R + P R A++ IGG +P+ +T+++ A +RDP+ + +P F
Sbjct: 277 AVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF 332
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 370 VVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
V+E R + P R A++ IGG +P+ +T+++ A +RDP+ + +P F
Sbjct: 276 AVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF 331
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 370 VVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
V+E R + P R A++ IGG +P+ +T+++ A +RDP+ + +P F
Sbjct: 277 AVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRF 332
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 370 VVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
V+E R + P R A++ IGG +P+ +T+++ A +RDP + +P F
Sbjct: 276 AVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPSQFPDPHRF 331
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 18/148 (12%)
Query: 331 ELMH--NPRVMKKVQEELAQV---VGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVP 385
LMH N + + K+ +E+ + + D+ ++E + + + V+E+ R +V
Sbjct: 283 HLMHPKNKKWLDKLHKEIDEFPAQLNYDNVMDE-----MPFAERCVRESIRRDPPLLMVM 337
Query: 386 RRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEK-------FLNDGIASK 438
R +G Y VPK I + H D + + NP + PE+ F+ G A
Sbjct: 338 RMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEKVDGAFIGFG-AGV 396
Query: 439 FDYSGIALAERMLMFVLASLLHSFDWKL 466
G A + +LA+ +D++L
Sbjct: 397 HKCIGQKFALLQVKTILATAFREYDFQL 424
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 18/148 (12%)
Query: 331 ELMH--NPRVMKKVQEELAQV---VGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVP 385
LMH N + + K+ +E+ + + D+ ++E + + + V+E+ R +V
Sbjct: 277 HLMHPKNKKWLDKLHKEIDEFPAQLNYDNVMDE-----MPFAERCVRESIRRDPPLLMVM 331
Query: 386 RRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEK-------FLNDGIASK 438
R +G Y VPK I + H D + + NP + PE+ F+ G A
Sbjct: 332 RMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEKVDGAFIGFG-AGV 390
Query: 439 FDYSGIALAERMLMFVLASLLHSFDWKL 466
G A + +LA+ +D++L
Sbjct: 391 HKCIGQKFALLQVKTILATAFREYDFQL 418
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 18/148 (12%)
Query: 331 ELMH--NPRVMKKVQEELAQV---VGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVP 385
LMH N + + K+ +E+ + + D+ ++E + + + V+E+ R +V
Sbjct: 292 HLMHPKNKKWLDKLHKEIDEFPAQLNYDNVMDE-----MPFAERCVRESIRRDPPLLMVM 346
Query: 386 RRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEK-------FLNDGIASK 438
R +G Y VPK I + H D + + NP + PE+ F+ G A
Sbjct: 347 RMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEKVDGAFIGFG-AGV 405
Query: 439 FDYSGIALAERMLMFVLASLLHSFDWKL 466
G A + +LA+ +D++L
Sbjct: 406 HKCIGQKFALLQVKTILATAFREYDFQL 433
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 367 LDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNP 422
+ V+E R S + R AS+ I G T+ + + L + A +RDP I+ NP
Sbjct: 267 IGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNP 322
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Query: 367 LDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFG 426
+D VV+E R S V R + +I G +P T ++ + A +RDP +D+P F
Sbjct: 287 VDTVVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFL 346
Query: 427 PEKFLNDGIASKFDYS---GIALAERMLMFVLASL 458
P + N I G ALA L VL L
Sbjct: 347 PGRKPNRHITFGHGMHHCLGSALARIELSVVLRVL 381
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 369 AVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNP 422
VV+E R SV + R A + +GG T+ +++++ ++RD + ++NP
Sbjct: 278 GVVEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENP 331
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Query: 367 LDAVVKETFRLHSVPYLVPRR-ASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
+ A V E R+ SV +P R A++ + G TVP D +I + + DP+ +D+P
Sbjct: 282 MPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERV 341
Query: 426 GPEKFLNDGIASKFDYS-----GIALAERMLMFVLASLL 459
+ N +A F Y G LA L L +LL
Sbjct: 342 DFHRTDNHHVA--FGYGVHQCVGQHLARLELEVALETLL 378
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 344 EELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYL-VPRRASQSSSIGGYTVPKD 402
++LAQ+ S +F V+E R H+ L + R A + IG V +
Sbjct: 259 DQLAQLKANPSLAPQF-----------VEELCRYHTASALAIKRTAKEDVMIGDKLVRAN 307
Query: 403 TTIILNVWAIHRDPQIWDNPLEFG------PEKFLNDGIASKFDYSGIA--LAERMLMFV 454
II + + +RD ++++NP EF P+ L G D+ IA LA+ L V
Sbjct: 308 EGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLGFGFG---DHRCIAEHLAKAELTTV 364
Query: 455 LASLLHSF 462
++L F
Sbjct: 365 FSTLYQKF 372
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 344 EELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYL-VPRRASQSSSIGGYTVPKD 402
++LAQ+ S +F V+E R H+ L + R A + IG V +
Sbjct: 259 DQLAQLKANPSLAPQF-----------VEELCRYHTASALAIKRTAKEDVMIGDKLVRAN 307
Query: 403 TTIILNVWAIHRDPQIWDNPLEFG------PEKFLNDGIASKFDYSGIA--LAERMLMFV 454
II + + +RD ++++NP EF P+ L G D+ IA LA+ L V
Sbjct: 308 EGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLGFGFG---DHRCIAEHLAKAELTTV 364
Query: 455 LASLLHSF 462
++L F
Sbjct: 365 FSTLYQKF 372
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 344 EELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYL-VPRRASQSSSIGGYTVPKD 402
++LAQ+ S +F V+E R H+ L + R A + IG V +
Sbjct: 260 DQLAQLKANPSLAPQF-----------VEELCRYHTASALAIKRTAKEDVMIGDKLVRAN 308
Query: 403 TTIILNVWAIHRDPQIWDNPLEFG------PEKFLNDGIASKFDYSGIA--LAERMLMFV 454
II + + +RD ++++NP EF P+ L G D+ IA LA+ L V
Sbjct: 309 EGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLGFGFG---DHRCIAEHLAKAELTTV 365
Query: 455 LASLLHSF 462
++L F
Sbjct: 366 FSTLYQKF 373
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 344 EELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYL-VPRRASQSSSIGGYTVPKD 402
++LAQ+ S +F V+E R H+ L + R A + IG V +
Sbjct: 260 DQLAQLKANPSLAPQF-----------VEELCRYHTASALAIKRTAKEDVMIGDKLVRAN 308
Query: 403 TTIILNVWAIHRDPQIWDNPLEFG------PEKFLNDGIASKFDYSGIA--LAERMLMFV 454
II + + +RD ++++NP EF P+ L G D+ IA LA+ L V
Sbjct: 309 EGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLGFGFG---DHRCIAEHLAKAELTTV 365
Query: 455 LASLLHSF 462
++L F
Sbjct: 366 FSTLYQKF 373
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 344 EELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYL-VPRRASQSSSIGGYTVPKD 402
++LAQ+ S +F V+E R H+ L + R A + IG V +
Sbjct: 261 DQLAQLKANPSLAPQF-----------VEELCRYHTASALAIKRTAKEDVMIGDKLVRAN 309
Query: 403 TTIILNVWAIHRDPQIWDNPLEFG------PEKFLNDGIASKFDYSGIA--LAERMLMFV 454
II + + +RD ++++NP EF P+ L G D+ IA LA+ L V
Sbjct: 310 EGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLGFGFG---DHRCIAEHLAKAELTTV 366
Query: 455 LASLLHSF 462
++L F
Sbjct: 367 FSTLYQKF 374
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 344 EELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYL-VPRRASQSSSIGGYTVPKD 402
++LAQ+ S +F V+E R H+ L + R A + IG V +
Sbjct: 259 DQLAQLKANPSLAPQF-----------VEELCRYHTASALAIKRTAKEDVMIGDKLVRAN 307
Query: 403 TTIILNVWAIHRDPQIWDNPLEFG------PEKFLNDGIASKFDYSGIA--LAERMLMFV 454
II + + +RD ++++NP EF P+ L G D+ IA LA+ L V
Sbjct: 308 EGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLGFGFG---DHRCIAEHLAKAELTTV 364
Query: 455 LASLLHSF 462
++L F
Sbjct: 365 FSTLYQKF 372
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 344 EELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYL-VPRRASQSSSIGGYTVPKD 402
++LAQ+ S +F V+E R H+ L + R A + IG V +
Sbjct: 259 DQLAQLKANPSLAPQF-----------VEELCRYHTASALAIKRTAKEDVMIGDKLVRAN 307
Query: 403 TTIILNVWAIHRDPQIWDNPLEFG------PEKFLNDGIASKFDYSGIA--LAERMLMFV 454
II + + +RD ++++NP EF P+ L G D+ IA LA+ L V
Sbjct: 308 EGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLGFGFG---DHRCIAEHLAKAELTTV 364
Query: 455 LASLLHSF 462
++L F
Sbjct: 365 FSTLYQKF 372
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 344 EELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYL-VPRRASQSSSIGGYTVPKD 402
++LAQ+ S +F V+E R H+ L + R A + IG V +
Sbjct: 259 DQLAQLKANPSLAPQF-----------VEELCRYHTATALAIKRTAKEDVMIGDKLVRAN 307
Query: 403 TTIILNVWAIHRDPQIWDNPLEFG------PEKFLNDGIASKFDYSGIA--LAERMLMFV 454
II + + +RD ++++NP EF P+ L G D+ IA LA+ L V
Sbjct: 308 EGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLGFGFG---DHRCIAEHLAKAELTTV 364
Query: 455 LASLLHSF 462
++L F
Sbjct: 365 FSTLYQKF 372
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 344 EELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYL-VPRRASQSSSIGGYTVPKD 402
++LAQ+ S +F V+E R H+ L + R A + IG V +
Sbjct: 260 DQLAQLKANPSLAPQF-----------VEELCRYHTATALAIKRTAKEDVMIGDKLVRAN 308
Query: 403 TTIILNVWAIHRDPQIWDNPLEFG------PEKFLNDGIASKFDYSGIA--LAERMLMFV 454
II + + +RD ++++NP EF P+ L G D+ IA LA+ L V
Sbjct: 309 EGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLGFGFG---DHRCIAEHLAKAELTTV 365
Query: 455 LASLLHSF 462
++L F
Sbjct: 366 FSTLYQKF 373
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 344 EELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYL-VPRRASQSSSIGGYTVPKD 402
++LAQ+ S +F V+E R H+ L + R A + IG V +
Sbjct: 259 DQLAQLKANPSLAPQF-----------VEELCRYHTASALAIKRTAKEDVMIGDKLVRAN 307
Query: 403 TTIILNVWAIHRDPQIWDNPLEFG------PEKFLNDGIASKFDYSGIA--LAERMLMFV 454
II + + +RD ++++NP EF P+ L G D+ IA LA+ L V
Sbjct: 308 EGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLGFGFG---DHRCIAEHLAKAELTTV 364
Query: 455 LASLLHSF 462
++L F
Sbjct: 365 FSTLYQKF 372
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 344 EELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKD 402
++LAQ+ S +F V+E R H+ V + R A + IG V +
Sbjct: 259 DQLAQLKANPSLAPQF-----------VEELCRYHTAVALAIKRTAKEDVMIGDKLVRAN 307
Query: 403 TTIILNVWAIHRDPQIWDNPLEFG------PEKFLNDGIASKFDYSGIA--LAERMLMFV 454
II + + +RD ++++NP EF P+ L G D+ IA LA+ L V
Sbjct: 308 EGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLGFGFG---DHRCIAEHLAKAELTTV 364
Query: 455 LASLLHSF 462
++L F
Sbjct: 365 FSTLYQKF 372
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 23/128 (17%)
Query: 344 EELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKD 402
++LAQ+ S +F V+E R H+ V + R A + IG V +
Sbjct: 260 DQLAQLKANPSLAPQF-----------VEELCRYHTAVALAIKRTAKEDVMIGDKLVRAN 308
Query: 403 TTIILNVWAIHRDPQIWDNPLEFG------PEKFLNDGIASKFDYSGIA--LAERMLMFV 454
II + + +RD ++++NP EF P+ L G D+ IA LA+ L V
Sbjct: 309 EGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLGFGFG---DHRCIAEHLAKAELTTV 365
Query: 455 LASLLHSF 462
++L F
Sbjct: 366 FSTLYQKF 373
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Query: 70 VSSPSLVKQVVRDQDITFANRD--PPIAGLVASFG-----GNDILFSNYGPEWRKLRKLF 122
VS P L+KQ++ D++ R P +V ++ + +F+ YGP RKLR+L
Sbjct: 43 VSDPVLLKQLLTSSDVSKDARAHWPAFGEVVGTWPLALWVAVENMFTAYGPNHRKLRRL- 101
Query: 123 MGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDV-GELSISTFVCVIQNML 180
+ S +DA + V ++ L + G+P+D+ EL+ + VI +++
Sbjct: 102 VAPAFSARRVDAMRPAVEAMVTGLVDRL---AELPAGEPVDLRQELAYPLPIAVIGHLM 157
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 335 NPRVMKKVQEELA-------QVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYL---- 383
NP + V+ EL Q V + + + L LD+V+ E+ RL + P++
Sbjct: 292 NPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAAPFITREV 351
Query: 384 VPRRASQSSSIGGYTVPK-DTTIILNVWAIHRDPQIWDNPLEFGPEKFLNDGIASKFDY 441
V A + + + + D ++ + RDP+I+ +P F +FLN + K D+
Sbjct: 352 VVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDF 410
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 335 NPRVMKKVQEELA-------QVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYL---- 383
NP + V+ EL Q V + + + L LD+V+ E+ RL + P++
Sbjct: 280 NPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAAPFITREV 339
Query: 384 VPRRASQSSSIGGYTVPK-DTTIILNVWAIHRDPQIWDNPLEFGPEKFLNDGIASKFDY 441
V A + + + + D ++ + RDP+I+ +P F +FLN + K D+
Sbjct: 340 VVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDF 398
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 332 LMHNPRV-----MKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPR 386
LMH V ++K EE + ++ ++E + + + +E+ R ++ R
Sbjct: 280 LMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPLLMLMR 334
Query: 387 RASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEK-------FLNDGIASKF 439
+ +G Y VPK I + H D + + P + PE+ F+ G A
Sbjct: 335 KVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGAFIGFG-AGVH 393
Query: 440 DYSGIALAERMLMFVLASLLHSFDWKL 466
G + +LA+ S+D++L
Sbjct: 394 KCIGQKFGLLQVKTILATAFRSYDFQL 420
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 332 LMHNPRV-----MKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPR 386
LMH V ++K EE + ++ ++E + + + +E+ R ++ R
Sbjct: 281 LMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPLLMLMR 335
Query: 387 RASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEK-------FLNDGIASKF 439
+ +G Y VPK I + H D + + P + PE+ F+ G A
Sbjct: 336 KVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGAFIGFG-AGVH 394
Query: 440 DYSGIALAERMLMFVLASLLHSFDWKL 466
G + +LA+ S+D++L
Sbjct: 395 KCIGQKFGLLQVKTILATAFRSYDFQL 421
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 332 LMHNPRV-----MKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPR 386
LMH V ++K EE + ++ ++E + + + +E+ R ++ R
Sbjct: 280 LMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPLLMLMR 334
Query: 387 RASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEK-------FLNDGIASKF 439
+ +G Y VPK I + H D + + P + PE+ F+ G A
Sbjct: 335 KVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGAFIGFG-AGVH 393
Query: 440 DYSGIALAERMLMFVLASLLHSFDWKL 466
G + +LA+ S+D++L
Sbjct: 394 KCIGQKFGLLQVKTILATAFRSYDFQL 420
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 332 LMHNPRV-----MKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPR 386
LMH V ++K EE + ++ ++E + + + +E+ R ++ R
Sbjct: 279 LMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPLLMLMR 333
Query: 387 RASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEK-------FLNDGIASKF 439
+ +G Y VPK I + H D + + P + PE+ F+ G A
Sbjct: 334 KVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGAFIGFG-AGVH 392
Query: 440 DYSGIALAERMLMFVLASLLHSFDWKL 466
G + +LA+ S+D++L
Sbjct: 393 KCIGQKFGLLQVKTILATAFRSYDFQL 419
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 59/148 (39%), Gaps = 18/148 (12%)
Query: 331 ELMHNPRV-----MKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVP 385
LMH V ++K EE + ++ ++E + + + +E+ R ++
Sbjct: 292 HLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPLLMLM 346
Query: 386 RRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEK-------FLNDGIASK 438
R+ +G Y VPK I + H D + + P + PE+ F+ G A
Sbjct: 347 RKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGAFIGFG-AGV 405
Query: 439 FDYSGIALAERMLMFVLASLLHSFDWKL 466
G + +LA+ S+D++L
Sbjct: 406 HKCIGQKFGLLQVKTILATAFRSYDFQL 433
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 332 LMHNPRV-----MKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPR 386
LMH V ++K EE + ++ ++E + + + +E+ R ++ R
Sbjct: 293 LMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPLLMLMR 347
Query: 387 RASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEK-------FLNDGIASKF 439
+ +G Y VPK I + H D + + P + PE+ F+ G A
Sbjct: 348 KVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGAFIGFG-AGVH 406
Query: 440 DYSGIALAERMLMFVLASLLHSFDWKL 466
G + +LA+ S+D++L
Sbjct: 407 KCIGQKFGLLQVKTILATAFRSYDFQL 433
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 369 AVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAI--HRDPQIWDNPLEFG 426
A+V+E R + R ++++ + G +P D +++N W + +RD D+P F
Sbjct: 296 AIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPAD--VMVNTWVLSANRDSDAHDDPDRFD 353
Query: 427 PEK 429
P +
Sbjct: 354 PSR 356
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 369 AVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAI--HRDPQIWDNPLEFG 426
A+V+E R + R ++++ + G +P D +++N W + +RD D+P F
Sbjct: 276 AIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPAD--VMVNTWVLSANRDSDAHDDPDRFD 333
Query: 427 PEK 429
P +
Sbjct: 334 PSR 336
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 364 LKYLDAVVKETFRLHSVPYLVPRR-ASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNP 422
LK V+ET R +S +P R A++ S I + K +I+ + + +RD +D P
Sbjct: 215 LKNRSGFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEP 274
>pdb|2F9J|A Chain A, 3.0 Angstrom Resolution Structure Of A Y22m Mutant Of
The Spliceosomal Protein P14 Bound To A Region Of
Sf3b155
pdb|2F9J|B Chain B, 3.0 Angstrom Resolution Structure Of A Y22m Mutant Of
The Spliceosomal Protein P14 Bound To A Region Of
Sf3b155
Length = 125
Score = 31.6 bits (70), Expect = 1.2, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 12 VKKSRKANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGN 64
++ +++AN +LPP + +I LP+ T + ++ G YGPI ++ +GN
Sbjct: 3 MQAAKRANIRLPPEVNRILMIRNLPYKITAE---EMYDIFGKYGPIRQIRVGN 52
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 372 KETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFL 431
+E RL+ +++ RR + +G +P+ TT++L+ + R + F PE+FL
Sbjct: 259 QEALRLYPPAWILTRRLERPLLLGEDRLPQGTTLVLSPYVTQR--LYFPEGEAFQPERFL 316
Query: 432 NDGIASKFDYSGIALAERMLM 452
+ Y L +R+ +
Sbjct: 317 AERGTPSGRYFPFGLGQRLCL 337
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 367 LDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
++ +V E R + + R A S +GG T+ K +++ ++ +RD ++ D P EF
Sbjct: 298 VETMVPEIIRWQTPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEF 356
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 372 KETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFL 431
+E RL+ +++ RR + +G +P TT++L+ + R + + F PE+FL
Sbjct: 259 QEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQR--LHFPDGEAFRPERFL 316
Query: 432 NDGIASKFDYSGIALAERMLM 452
+ Y L +R+ +
Sbjct: 317 EERGTPSGRYFPFGLGQRLCL 337
>pdb|2F9D|A Chain A, 2.5 Angstrom Resolution Structure Of The Spliceosomal
Protein P14 Bound To Region Of Sf3b155
pdb|2F9D|B Chain B, 2.5 Angstrom Resolution Structure Of The Spliceosomal
Protein P14 Bound To Region Of Sf3b155
Length = 125
Score = 30.8 bits (68), Expect = 2.0, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 12 VKKSRKANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGN 64
++ +++AN +LPP + I LP+ T + ++ G YGPI ++ +GN
Sbjct: 3 MQAAKRANIRLPPEVNRILYIRNLPYKITAE---EMYDIFGKYGPIRQIRVGN 52
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 414 RDPQIWDNPLEFGPEKFLNDGIA 436
+DP+++D P E+ P++F+ DG A
Sbjct: 381 KDPKVFDRPEEYVPDRFVGDGEA 403
>pdb|3B0Z|B Chain B, Crystal Structure Of Cytoplasmic Domain Of Flhb From
Salmonella Typhimurium
Length = 114
Score = 30.4 bits (67), Expect = 2.5, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 1 SVLAVAYFAWNVKKSRKANAKLPPGPRGLPVIGYLPFL 38
+V V + W +K+ R A + PP P LPV L F+
Sbjct: 70 AVAEVLAWVWQLKRWRLAGGQRPPQPENLPVPEALDFM 107
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 370 VVKETFRLHSVPYL-VPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQI 418
V E R +VPY PR A + ++ G + K ++I ++ A +RDP +
Sbjct: 272 AVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPAL 321
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 21/127 (16%)
Query: 369 AVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPE 428
A++ E R+ R ++ IGG + + I + A +RDP+++D+P
Sbjct: 268 AIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDP------ 321
Query: 429 KFLNDGIASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTKLD-----LSEKFGILIK 483
FD++ A R L F L HS ++ + + L+E++ +
Sbjct: 322 --------DVFDHTRPPAASRNLSFGLGP--HSCAGQIISRAEATTVFAVLAERYERIEL 371
Query: 484 KKEPLVA 490
+EP VA
Sbjct: 372 AEEPTVA 378
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 21/127 (16%)
Query: 369 AVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPE 428
A++ E R+ R ++ IGG + + I + A +RDP+++D+P
Sbjct: 266 AIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDP------ 319
Query: 429 KFLNDGIASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTKLD-----LSEKFGILIK 483
FD++ A R L F L HS ++ + + L+E++ +
Sbjct: 320 --------DVFDHTRPPAASRNLSFGLGP--HSCAGQIISRAEATTVFAVLAERYERIEL 369
Query: 484 KKEPLVA 490
+EP VA
Sbjct: 370 AEEPTVA 376
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 370 VVKETFRLH-SVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
V+E R ++P R A++ + G +P T + + HRDP+++ + F
Sbjct: 289 AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF 345
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 370 VVKETFRLH-SVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEF 425
V+E R ++P R A++ + G +P T + + HRDP+++ + F
Sbjct: 279 AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF 335
>pdb|2FHO|B Chain B, Nmr Solution Structure Of The Human Spliceosomal Protein
Complex P14-Sf3b155
Length = 87
Score = 28.9 bits (63), Expect = 6.2, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 17 KANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGN 64
+AN +LPP + I LP+ T + ++ G YGPI ++ +GN
Sbjct: 2 RANIRLPPEVNRILYIRNLPYKITAE---EMYDIFGKYGPIRQIRVGN 46
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 12/51 (23%), Positives = 26/51 (50%)
Query: 372 KETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNP 422
+E R S R ++ + G T+ + +++ + + +RDP+ WD+P
Sbjct: 289 EEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDP 339
>pdb|2A2P|A Chain A, Solution Structure Of Selm From Mus Musculus
Length = 129
Score = 28.9 bits (63), Expect = 7.7, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 109 SNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRD---LYNN 153
+NY P+W +LR L G++ + C R +EVK + + LY+N
Sbjct: 2 TNYRPDWNRLRGLARGRV---ETCGGCQLNRLKEVKAFVTEDIQLYHN 46
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 386 RRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLN 432
R A + + G + + I+L+ + +RD +++ NP EF +F N
Sbjct: 319 RTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRFPN 365
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,872,558
Number of Sequences: 62578
Number of extensions: 553346
Number of successful extensions: 1414
Number of sequences better than 100.0: 152
Number of HSP's better than 100.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 1209
Number of HSP's gapped (non-prelim): 228
length of query: 503
length of database: 14,973,337
effective HSP length: 103
effective length of query: 400
effective length of database: 8,527,803
effective search space: 3411121200
effective search space used: 3411121200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)