Query         035745
Match_columns 503
No_of_seqs    189 out of 1918
Neff          10.7
Searched_HMMs 46136
Date          Fri Mar 29 06:01:57 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035745.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035745hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 2.4E-78 5.3E-83  586.6  44.8  449   19-496    24-488 (489)
  2 PLN00110 flavonoid 3',5'-hydro 100.0 5.7E-72 1.2E-76  558.7  45.2  457   17-499    27-500 (504)
  3 KOG0158 Cytochrome P450 CYP3/C 100.0 5.5E-72 1.2E-76  533.5  38.6  445   19-496    29-499 (499)
  4 PLN03234 cytochrome P450 83B1; 100.0 3.3E-71 7.2E-76  556.1  44.9  462    9-495    16-498 (499)
  5 PLN02971 tryptophan N-hydroxyl 100.0   3E-71 6.5E-76  558.6  44.4  462   19-502    55-539 (543)
  6 PLN02687 flavonoid 3'-monooxyg 100.0   2E-70 4.3E-75  551.0  45.3  454   19-496    32-509 (517)
  7 PLN02183 ferulate 5-hydroxylas 100.0 5.9E-70 1.3E-74  547.4  45.4  456   19-500    34-515 (516)
  8 PLN03112 cytochrome P450 famil 100.0 7.4E-70 1.6E-74  547.9  46.2  467   15-502    26-513 (514)
  9 PLN02394 trans-cinnamate 4-mon 100.0 4.2E-69 9.2E-74  541.4  45.4  460   13-496    22-502 (503)
 10 PTZ00404 cytochrome P450; Prov 100.0 2.9E-69 6.2E-74  539.7  43.9  447   18-495    26-482 (482)
 11 PLN02966 cytochrome P450 83A1  100.0 1.1E-68 2.5E-73  536.8  46.3  452   19-495    27-499 (502)
 12 PLN00168 Cytochrome P450; Prov 100.0 1.1E-68 2.4E-73  538.6  46.2  461   19-496    33-517 (519)
 13 PLN02655 ent-kaurene oxidase   100.0 2.5E-68 5.5E-73  529.2  42.6  448   23-497     1-465 (466)
 14 PLN02290 cytokinin trans-hydro 100.0 1.2E-68 2.6E-73  539.4  37.0  447   19-497    40-516 (516)
 15 KOG0159 Cytochrome P450 CYP11/ 100.0 1.9E-67 4.2E-72  490.0  36.6  450   19-497    48-519 (519)
 16 PLN03018 homomethionine N-hydr 100.0 4.1E-66 8.9E-71  517.2  45.1  459   19-497    38-525 (534)
 17 PF00067 p450:  Cytochrome P450 100.0 1.8E-67   4E-72  527.8  30.3  442   23-492     1-463 (463)
 18 KOG0157 Cytochrome P450 CYP4/C 100.0 3.6E-66 7.8E-71  512.5  35.7  446   19-497    33-497 (497)
 19 PLN02500 cytochrome P450 90B1  100.0 5.7E-66 1.2E-70  516.1  37.0  425   18-494    35-488 (490)
 20 PLN02774 brassinosteroid-6-oxi 100.0   2E-65 4.2E-70  508.1  37.3  420   19-494    29-462 (463)
 21 PLN03141 3-epi-6-deoxocathaste 100.0 1.5E-64 3.2E-69  500.8  37.8  431   17-497     3-451 (452)
 22 PLN02196 abscisic acid 8'-hydr 100.0 1.3E-64 2.8E-69  501.8  36.8  420   18-495    32-462 (463)
 23 PLN03195 fatty acid omega-hydr 100.0   2E-64 4.3E-69  508.3  37.2  447   22-496    31-516 (516)
 24 PLN02738 carotene beta-ring hy 100.0 4.8E-64   1E-68  507.5  40.0  439   33-497   143-596 (633)
 25 PLN02169 fatty acid (omega-1)- 100.0 1.2E-63 2.7E-68  497.7  38.2  442   20-495    30-499 (500)
 26 PLN02302 ent-kaurenoic acid ox 100.0 8.1E-63 1.7E-67  495.6  40.3  431   18-497    39-489 (490)
 27 PLN02987 Cytochrome P450, fami 100.0 3.2E-62 6.9E-67  482.9  37.8  428   14-496    23-469 (472)
 28 PLN02936 epsilon-ring hydroxyl 100.0 8.1E-62 1.7E-66  484.8  38.2  448   21-497    12-483 (489)
 29 PLN02426 cytochrome P450, fami 100.0 5.4E-60 1.2E-64  470.7  38.5  430   28-496    48-500 (502)
 30 KOG0684 Cytochrome P450 [Secon 100.0 2.4E-60 5.2E-65  431.4  32.3  434   19-497    29-486 (486)
 31 PLN02648 allene oxide synthase 100.0 7.7E-56 1.7E-60  434.0  28.0  400   18-469    14-462 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 4.1E-49   9E-54  382.2  33.6  380   43-495    24-410 (411)
 33 PF05952 ComX:  Bacillus compet  59.3     8.8 0.00019   25.2   2.1   18  328-345     5-22  (57)
 34 PF12554 MOZART1:  Mitotic-spin  50.7      51  0.0011   20.9   4.4   43  297-347     6-48  (48)
 35 PRK06789 flagellar motor switc  45.8      17 0.00038   25.4   2.0   40  369-408    20-62  (74)
 36 PF12508 DUF3714:  Protein of u  40.8      20 0.00043   31.0   2.0   43  364-407    52-94  (200)
 37 PF08285 DPM3:  Dolichol-phosph  36.1   1E+02  0.0022   22.8   4.8   48  296-350    34-81  (91)
 38 PF09551 Spore_II_R:  Stage II   30.8      51  0.0011   26.1   2.7   43  362-404    52-98  (130)
 39 KOG1412 Aspartate aminotransfe  28.7 2.6E+02  0.0057   26.1   7.0   64  292-379   342-407 (410)
 40 COG0851 MinE Septum formation   28.0   1E+02  0.0023   22.3   3.6   18  335-352    35-52  (88)
 41 PF13625 Helicase_C_3:  Helicas  26.9 1.3E+02  0.0029   23.8   4.6   41   41-83     74-114 (129)
 42 PF14483 Cut8_M:  Cut8 dimerisa  24.7 1.3E+02  0.0027   18.0   3.0   18  327-344    17-35  (38)
 43 COG1707 ACT domain-containing   23.1   1E+02  0.0022   25.4   3.1   37   40-76    153-194 (218)
 44 KOG0114 Predicted RNA-binding   23.1 3.4E+02  0.0074   20.6   5.7   41   43-83     31-77  (124)
 45 PF14129 DUF4296:  Domain of un  22.6 3.1E+02  0.0067   19.9   6.1   46  297-350    33-78  (87)
 46 PF14550 Peptidase_U35_2:  Puta  22.0      64  0.0014   25.3   1.8   21  387-407    72-92  (122)
 47 PRK05933 type III secretion sy  21.3      76  0.0016   29.4   2.3   42  367-408   317-362 (372)
 48 PRK13467 F0F1 ATP synthase sub  20.1 1.4E+02  0.0031   20.5   2.9   24  322-345    20-43  (66)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.4e-78  Score=586.57  Aligned_cols=449  Identities=42%  Similarity=0.773  Sum_probs=395.6

Q ss_pred             CCCCCCCCCCCCccccccccCCCChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCCc-cccc
Q 035745           19 NAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPP-IAGL   97 (503)
Q Consensus        19 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~-~~~~   97 (503)
                      +.+.||||+++|++||++++....+|..++++.++|||+|.+|+|..++|||+|+++++|++.+++..|+.|+.. ....
T Consensus        24 ~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~  103 (489)
T KOG0156|consen   24 RRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLK  103 (489)
T ss_pred             CCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHH
Confidence            488999999999999999995445999999999999999999999999999999999999999999999999872 2335


Q ss_pred             ccccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHHHHHHH
Q 035745           98 VASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQ  177 (503)
Q Consensus        98 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~  177 (503)
                      ...+++.+++++.+|+.|+.+||.....+++...++.+...-.++++.+++.+.+ ..  .+.+||+.+.+..++.++|+
T Consensus       104 ~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~--~~~~vdl~~~l~~~~~nvI~  180 (489)
T KOG0156|consen  104 YLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SK--KGEPVDLSELLDLLVGNVIC  180 (489)
T ss_pred             HhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cC--CCceeeHHHHHHHHHHHHHH
Confidence            5566788999998999999999999999999999999988889999999999987 22  22799999999999999999


Q ss_pred             HHhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCCccccccc-cccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 035745          178 NMLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIP-VLSWLD-IQGIEKRTKKISLCFENFIDSAVEQYRNK  255 (503)
Q Consensus       178 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  255 (503)
                      +++||.++...+.   +...++.+.+.......+...+.+++| ++.+++ ..+..++.......+..++...++++++.
T Consensus       181 ~~~fG~rf~~~~~---~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~  257 (489)
T KOG0156|consen  181 RMLFGRRFEEEDE---EEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREK  257 (489)
T ss_pred             HHHhCCccccCCc---hHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999987643   445668899999999999888899999 667664 33566677777777999999999998875


Q ss_pred             hhhhccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHHhhC
Q 035745          256 VSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHN  335 (503)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L~~~  335 (503)
                      .   +       . + ...|+++.||+..++++.+. ++++++.+.+.++++   ||+     |||++|+.|++.+|++|
T Consensus       258 ~---~-------~-~-~~~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~---AGt-----dTta~Tl~Wa~a~Ll~~  316 (489)
T KOG0156|consen  258 I---G-------D-E-EGRDFVDALLKLMKEEKAEG-LTDDHLKALILDLFL---AGT-----DTTATTLEWAMAELLNN  316 (489)
T ss_pred             h---c-------c-C-CCCcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHh---ccc-----chHHHHHHHHHHHHHhC
Confidence            3   1       1 1 22899999999977643333 999999999999999   999     99999999999999999


Q ss_pred             cHHHHHHHHHHHHhhCCCCccccccCCCChhHHHHHHHhhhcCC-CCCcCcccccCcccccCeeeCCCCEEEEehhhhcc
Q 035745          336 PRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHR  414 (503)
Q Consensus       336 P~~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p-~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~  414 (503)
                      |++|+|+|+||++++|.++.++.+|+.+||||+|||+||+|++| .|..++|.+++|++++||.|||||.|+++.|++|+
T Consensus       317 Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~r  396 (489)
T KOG0156|consen  317 PEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHR  396 (489)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhc
Confidence            99999999999999998888999999999999999999999999 88889999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCccCCC------------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCcccccee
Q 035745          415 DPQIWDNPLEFGPEKFLNDG------------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKFGILI  482 (503)
Q Consensus       415 d~~~~~dp~~F~P~R~l~~~------------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  482 (503)
                      ||++|+||++|+||||++++            +.|++.|||..+|++++.++++.|+++|+|++.+| .+++... +.+.
T Consensus       397 Dp~vw~dP~eF~PERFl~~~d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~-~~~~  474 (489)
T KOG0156|consen  397 DPKVWEDPEEFKPERFLDSNDGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDMEEA-GLTL  474 (489)
T ss_pred             CCccCCCccccChhhhcCCccccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCCccc-ccce
Confidence            99999999999999999962            45788999999999999999999999999999877 6677666 4667


Q ss_pred             eccCceeEeeccCC
Q 035745          483 KKKEPLVAIPTPRL  496 (503)
Q Consensus       483 ~~~~~~~v~~~~R~  496 (503)
                      ..+.++.+...+|.
T Consensus       475 ~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  475 KKKKPLKAVPVPRL  488 (489)
T ss_pred             ecCCcceeeeecCC
Confidence            77778888887774


No 2  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=5.7e-72  Score=558.69  Aligned_cols=457  Identities=35%  Similarity=0.690  Sum_probs=372.1

Q ss_pred             cCCCCCCCCCCCCCccccccccCCCChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCCcccc
Q 035745           17 KANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAG   96 (503)
Q Consensus        17 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~~~~   96 (503)
                      +.+.+.||||+++|++|+++.+ ..+++.++.+++++||+||++++|++++|+++||+++++++.++...|..++.....
T Consensus        27 ~~~~~~pPgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~  105 (504)
T PLN00110         27 KPSRKLPPGPRGWPLLGALPLL-GNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGA  105 (504)
T ss_pred             cccCCCcccCCCCCeeechhhc-CCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccch
Confidence            3467889999999999998877 456899999999999999999999999999999999999999887788877643322


Q ss_pred             cccccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHHHHHH
Q 035745           97 LVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVI  176 (503)
Q Consensus        97 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i  176 (503)
                      .....++.+++++.+|+.|+++|+.++.+.|++++++.+.+.+.+++..+++.+.....  .++++|+.+++..++.+++
T Consensus       106 ~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~--~g~~~~~~~~~~~~~~~vi  183 (504)
T PLN00110        106 THLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQ--RGEPVVVPEMLTFSMANMI  183 (504)
T ss_pred             hhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhcc--CCCcEeHHHHHHHHHHHHH
Confidence            22223344567778899999999999866899999999999999999999999875433  5568999999999999999


Q ss_pred             HHHhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 035745          177 QNMLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKV  256 (503)
Q Consensus       177 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  256 (503)
                      +.++||.++.....   .....+.+.+...+.......+..++|++.++...+..++..+..+.+.+++...++++++..
T Consensus       184 ~~~~fg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  260 (504)
T PLN00110        184 GQVILSRRVFETKG---SESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASA  260 (504)
T ss_pred             HHHHhCCcccccCc---hhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            99999998621111   123446666665554443333345667666543333445666677778888888888766532


Q ss_pred             hhhccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHHhhCc
Q 035745          257 SVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNP  336 (503)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L~~~P  336 (503)
                         +       . .....|+++.+++...++ ++..++++++..++.++++   ||+     |||+++++|++++|++||
T Consensus       261 ---~-------~-~~~~~d~l~~ll~~~~~~-~~~~l~~~~i~~~~~~~~~---Ag~-----dTta~~l~~~l~~L~~~P  320 (504)
T PLN00110        261 ---H-------E-RKGNPDFLDVVMANQENS-TGEKLTLTNIKALLLNLFT---AGT-----DTSSSVIEWSLAEMLKNP  320 (504)
T ss_pred             ---c-------c-cccCCChhhHHhhccccc-CCCCCCHHHHHHHHHhhhc---ccc-----cchHHHHHHHHHHHHhCH
Confidence               1       0 123468999999764321 2356999999999999999   999     999999999999999999


Q ss_pred             HHHHHHHHHHHHhhCCCCccccccCCCChhHHHHHHHhhhcCC-CCCcCcccccCcccccCeeeCCCCEEEEehhhhccC
Q 035745          337 RVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRD  415 (503)
Q Consensus       337 ~~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p-~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d  415 (503)
                      ++|+||++|++++++.++.++.+++++||||+|||+||||++| ++..++|.+.+|++++||.|||||.|.++.+++|+|
T Consensus       321 ~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d  400 (504)
T PLN00110        321 SILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRD  400 (504)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCC
Confidence            9999999999999987677899999999999999999999999 555578999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccCCC----------------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCcccc
Q 035745          416 PQIWDNPLEFGPEKFLNDG----------------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKFG  479 (503)
Q Consensus       416 ~~~~~dp~~F~P~R~l~~~----------------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~  479 (503)
                      |++|+||++|+||||+++.                +.|++.|+|++||++|+++++|+|+++|++++.++.++++....+
T Consensus       401 ~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~  480 (504)
T PLN00110        401 PDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFG  480 (504)
T ss_pred             hhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCcccccc
Confidence            9999999999999998531                347788999999999999999999999999998775544444467


Q ss_pred             ceeeccCceeEeeccCCCCC
Q 035745          480 ILIKKKEPLVAIPTPRLPNS  499 (503)
Q Consensus       480 ~~~~~~~~~~v~~~~R~~~~  499 (503)
                      .++.|+.++.+++++|.+.|
T Consensus       481 ~~~~~~~~~~~~~~~r~~~~  500 (504)
T PLN00110        481 LALQKAVPLSAMVTPRLHQS  500 (504)
T ss_pred             cccccCCCceEeeccCCCch
Confidence            78888899999999998664


No 3  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=5.5e-72  Score=533.46  Aligned_cols=445  Identities=24%  Similarity=0.383  Sum_probs=353.3

Q ss_pred             CCCCCCCCCCCCccccccccCC-CChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCCccccc
Q 035745           19 NAKLPPGPRGLPVIGYLPFLGT-TDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGL   97 (503)
Q Consensus        19 ~~~~ppgp~~~p~~G~~~~~~~-~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~~~~~   97 (503)
                      .++.+|+|+++|++|++..+.. +.......+.+.++||++.++.+.++.++|.||+++++|+.+..++|..+.......
T Consensus        29 ~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d  108 (499)
T KOG0158|consen   29 RRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGD  108 (499)
T ss_pred             ccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCC
Confidence            4668999999999999988753 223556666666669999999999999999999999999999999998854211111


Q ss_pred             ccccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHHHHHHH
Q 035745           98 VASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQ  177 (503)
Q Consensus        98 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~  177 (503)
                      .....+...++..+|+.|++.|..++ |.|+..+++++.+.+++.++++++.+.+...  .+..+++.+.+..++.|||+
T Consensus       109 ~~~~l~~~~Lf~~~g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~--~~~~~~~~dl~~~yT~DVI~  185 (499)
T KOG0158|consen  109 PEDPLSALNLFFLRGERWKRLRTKLS-PTFTSGKLKKMFPTMEEVGDELVRHLRRKSE--GGQEGEIKDLCARYTTDVIG  185 (499)
T ss_pred             CCCcccccCchhccCchHHHHHHhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhc--ccCCccHHHHHHHHHHHHHh
Confidence            11112335667778999999999997 9999999999999999999999999987543  22578889999999999999


Q ss_pred             HHhhhhhhhhhhccccchhHHHHHHHHHHHHH-hCCCc----ccccccccccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 035745          178 NMLWGEALELREKGISNLGAEIKFKLAELVVL-MGTPN----ISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQY  252 (503)
Q Consensus       178 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  252 (503)
                      +++||.+.+...+   + ...+.......+.. .....    ....+|.+....  ..........+.+.+.+...++.|
T Consensus       186 ~~AfG~~~~s~~d---~-~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l--~~~~~~~~~~~~~~~~v~~~v~~R  259 (499)
T KOG0158|consen  186 SCAFGLDANSLRD---P-KAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL--RVKLFPEDVTDFFRKLVNSRVEQR  259 (499)
T ss_pred             HhhcccchhhhcC---c-hHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh--hcccChHHHHHHHHHHHHHHHHHH
Confidence            9999999987764   2 23333333333332 11111    122233332211  111223344555666666666666


Q ss_pred             HhhhhhhccCCCCCCCCCCCchhHHHHHHHhhhc--cC--CcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHH
Q 035745          253 RNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQEN--ED--SASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWT  328 (503)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~--~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~  328 (503)
                      .++              .....|+++.|++.+.+  ++  ....++.+++++++..+++   ||.     ||||++++++
T Consensus       260 ~~~--------------~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~---AGf-----eTts~tlsf~  317 (499)
T KOG0158|consen  260 EKE--------------NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLL---AGF-----ETTASTLSFA  317 (499)
T ss_pred             Hhc--------------CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHH---hhh-----HhHHHHHHHH
Confidence            221              34788999999999864  11  1125999999999999999   999     9999999999


Q ss_pred             HHHHhhCcHHHHHHHHHHHHhhCCCCccccccCCCChhHHHHHHHhhhcCCCCCcCcccccCccccc-CeeeCCCCEEEE
Q 035745          329 MTELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQSSSIG-GYTVPKDTTIIL  407 (503)
Q Consensus       329 l~~L~~~P~~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~l~-g~~ip~G~~v~~  407 (503)
                      +|+||+||++|+||||||++++.....++++.+.+|+||++||+||||+||+...+.|.|++|++++ |+.||||+.|.+
T Consensus       318 lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~I  397 (499)
T KOG0158|consen  318 LYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMI  397 (499)
T ss_pred             HHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEe
Confidence            9999999999999999999997765459999999999999999999999995555899999999999 999999999999


Q ss_pred             ehhhhccCCCCCCCCCCCCCCCccCCC------------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCC
Q 035745          408 NVWAIHRDPQIWDNPLEFGPEKFLNDG------------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDLS  475 (503)
Q Consensus       408 ~~~~~~~d~~~~~dp~~F~P~R~l~~~------------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~  475 (503)
                      +.+++||||++||||++|+||||.+++            |.||+.|+|++||++|+|+.|++||++|+++..+. .... 
T Consensus       398 p~~alH~Dp~~~p~Pe~F~PERF~~~~~~~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~-t~~~-  475 (499)
T KOG0158|consen  398 PTYALHHDPEYWPEPEKFKPERFEEENNKSRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPT-TIIP-  475 (499)
T ss_pred             ecccccCCcccCCCcccCCCccCCCCcccccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCc-ccCc-
Confidence            999999999999999999999999654            56899999999999999999999999999999873 2222 


Q ss_pred             ccc---cceeeccCceeEeeccCC
Q 035745          476 EKF---GILIKKKEPLVAIPTPRL  496 (503)
Q Consensus       476 ~~~---~~~~~~~~~~~v~~~~R~  496 (503)
                      ...   ++++.|+.++++++++|+
T Consensus       476 ~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  476 LEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             ccCCccceeeecCCceEEEEEeCC
Confidence            334   788999999999999985


No 4  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=3.3e-71  Score=556.06  Aligned_cols=462  Identities=30%  Similarity=0.555  Sum_probs=369.4

Q ss_pred             HHHHHhhccCCCCCCCCCCCCCccccccccCCCChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhcccccc
Q 035745            9 AWNVKKSRKANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFA   88 (503)
Q Consensus         9 ~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~   88 (503)
                      .+..++....+.+.||||+++|++|++..+...+++.++.+++++||++|++++|+.++|+++||+++++|+.++...|.
T Consensus        16 ~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~   95 (499)
T PLN03234         16 FFFLRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFT   95 (499)
T ss_pred             HHHHHHhcCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCcccc
Confidence            33344444456788999999999999988844468889999999999999999999999999999999999998877888


Q ss_pred             cCCCcccccccccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccchhhhH
Q 035745           89 NRDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELS  168 (503)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~  168 (503)
                      .++...........+..+.+..+++.|+++|+.+..++|+++++..+.+.+.+.++++++.+.....  .++++|+.+++
T Consensus        96 ~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~--~~~~vd~~~~~  173 (499)
T PLN03234         96 ARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAAD--QSGTVDLSELL  173 (499)
T ss_pred             CCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhcc--CCCeEEHHHHH
Confidence            7764332222222234444556789999999986558999999999999999999999999975443  45689999999


Q ss_pred             HHHHHHHHHHHhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCCccccccccccccc-ccchHHHHHHHHHHHHHHHHH
Q 035745          169 ISTFVCVIQNMLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLD-IQGIEKRTKKISLCFENFIDS  247 (503)
Q Consensus       169 ~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~  247 (503)
                      ..+++++++.++||.+++..+    .....+.+.+.......+......++|++.++. ..+..++..++.+.+.+++..
T Consensus       174 ~~~t~dvi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~  249 (499)
T PLN03234        174 LSFTNCVVCRQAFGKRYNEYG----TEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQE  249 (499)
T ss_pred             HHHHHHHHHHHHhCCcccccc----hhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHH
Confidence            999999999999999876443    223445555554444333333344556544331 123346677888899999999


Q ss_pred             HHHHHHhhhhhhccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHH
Q 035745          248 AVEQYRNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEW  327 (503)
Q Consensus       248 ~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~  327 (503)
                      .++++++..   .       . .....|+++.+++..+++..+..++++++.+++.++++   ||+     |||+++++|
T Consensus       250 ~i~~~~~~~---~-------~-~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~---AG~-----dTTa~tl~~  310 (499)
T PLN03234        250 LLDETLDPN---R-------P-KQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVV---PGT-----DTAAAVVVW  310 (499)
T ss_pred             HHHHHHhhc---c-------c-CCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHh---cch-----hhHHHHHHH
Confidence            998865432   1       0 12346899999876543222236899999999999999   999     999999999


Q ss_pred             HHHHHhhCcHHHHHHHHHHHHhhCCCCccccccCCCChhHHHHHHHhhhcCC-CCCcCcccccCcccccCeeeCCCCEEE
Q 035745          328 TMTELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTII  406 (503)
Q Consensus       328 ~l~~L~~~P~~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p-~~~~~~R~~~~d~~l~g~~ip~G~~v~  406 (503)
                      ++++|++||++|+|+|+||++++++.+.++.+++++||||+|||+|+||++| ++..++|.+.+|++++||.|||||.|.
T Consensus       311 ~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~  390 (499)
T PLN03234        311 AMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQ  390 (499)
T ss_pred             HHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEE
Confidence            9999999999999999999999987677899999999999999999999999 555457999999999999999999999


Q ss_pred             EehhhhccCCCCC-CCCCCCCCCCccCCC---------------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCC
Q 035745          407 LNVWAIHRDPQIW-DNPLEFGPEKFLNDG---------------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGT  470 (503)
Q Consensus       407 ~~~~~~~~d~~~~-~dp~~F~P~R~l~~~---------------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~  470 (503)
                      ++.+++||||++| +||++|+||||+++.               +.|++.|+|++||++|+++++|.|+++|++++.++.
T Consensus       391 ~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~  470 (499)
T PLN03234        391 VNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGI  470 (499)
T ss_pred             EehHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCC
Confidence            9999999999999 899999999998631               347899999999999999999999999999998762


Q ss_pred             -C--CCCCccccceeeccCceeEeeccC
Q 035745          471 -K--LDLSEKFGILIKKKEPLVAIPTPR  495 (503)
Q Consensus       471 -~--~~~~~~~~~~~~~~~~~~v~~~~R  495 (503)
                       +  +......+++..|+.++.+.+++|
T Consensus       471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        471 KPEDIKMDVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             CCCCCCcccccccccccCCCeEEEeecC
Confidence             2  233334677777888888888877


No 5  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=3e-71  Score=558.58  Aligned_cols=462  Identities=26%  Similarity=0.493  Sum_probs=360.2

Q ss_pred             CCCCCCCCCCCCccccccccCCC-ChHHHHHHHHhhhC-CcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCCcccc
Q 035745           19 NAKLPPGPRGLPVIGYLPFLGTT-DLHKTFTELAGAYG-PIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAG   96 (503)
Q Consensus        19 ~~~~ppgp~~~p~~G~~~~~~~~-~~~~~~~~~~~kyG-~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~~~~   96 (503)
                      +.+.||||+++|++|+++.+..+ ..+.++.+++++|| ++|++++|++++|+|+||+++++++.+++..|.+++.....
T Consensus        55 ~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~  134 (543)
T PLN02971         55 LHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQ  134 (543)
T ss_pred             CCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccch
Confidence            56799999999999999887432 34788999999999 89999999999999999999999999988888888653322


Q ss_pred             cccccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHHHHHH
Q 035745           97 LVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVI  176 (503)
Q Consensus        97 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i  176 (503)
                      ...+.+..++++..+|+.|+++|+.++.+++++..++.+.+.+.++++.+++.+.....  .++++|+.+.+..++++++
T Consensus       135 ~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~~t~~vi  212 (543)
T PLN02971        135 KILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVK--NSEPVDLRFVTRHYCGNAI  212 (543)
T ss_pred             hhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCceehHHHHHHHHHHHH
Confidence            22222223457778899999999999767777777778888888888888887765332  4457999999999999999


Q ss_pred             HHHhhhhhhhhhhcc-ccchhHHHHHHHHHHHHHhC---CCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 035745          177 QNMLWGEALELREKG-ISNLGAEIKFKLAELVVLMG---TPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQY  252 (503)
Q Consensus       177 ~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  252 (503)
                      ++++||.++...... ...........+..++....   ...+..++|++.+++..+..+...+..+.+.+++...++++
T Consensus       213 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  292 (543)
T PLN02971        213 KRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDER  292 (543)
T ss_pred             HHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999886321100 00001122223333332211   11233456666554322334555666777888888888877


Q ss_pred             HhhhhhhccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHH
Q 035745          253 RNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTEL  332 (503)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L  332 (503)
                      ++.....+         .....|+++.|++..+++ ....++++++.+++.++++   ||+     |||+++++|++++|
T Consensus       293 ~~~~~~~~---------~~~~~d~l~~ll~~~~~~-~~~~ls~~~i~~~~~~l~~---AG~-----dTTa~tl~~~l~~L  354 (543)
T PLN02971        293 IKMWREGK---------RTQIEDFLDIFISIKDEA-GQPLLTADEIKPTIKELVM---AAP-----DNPSNAVEWAMAEM  354 (543)
T ss_pred             HHHHhccC---------CCCCcCHHHHHHhhhccc-CCCCCCHHHHHHhHHHHhe---ecc-----chHHHHHHHHHHHH
Confidence            65431100         112468999999865431 1124999999999999999   999     99999999999999


Q ss_pred             hhCcHHHHHHHHHHHHhhCCCCccccccCCCChhHHHHHHHhhhcCC-CCCcCcccccCcccccCeeeCCCCEEEEehhh
Q 035745          333 MHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWA  411 (503)
Q Consensus       333 ~~~P~~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p-~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~  411 (503)
                      ++||++|+|+|+||+++++.++.++.+++++||||+|||+|+||++| ++..++|.+.+|++++||.|||||.|++++++
T Consensus       355 a~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~  434 (543)
T PLN02971        355 INKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYG  434 (543)
T ss_pred             HhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHH
Confidence            99999999999999999987778899999999999999999999999 55667899999999999999999999999999


Q ss_pred             hccCCCCCCCCCCCCCCCccCCC---------------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCC-CCCCCC
Q 035745          412 IHRDPQIWDNPLEFGPEKFLNDG---------------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAG-TKLDLS  475 (503)
Q Consensus       412 ~~~d~~~~~dp~~F~P~R~l~~~---------------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~-~~~~~~  475 (503)
                      +||||++|+||++|+||||+++.               +.|++.|+|++||++|+++++|+|+++|+|++.++ ..+.+.
T Consensus       435 ~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~  514 (543)
T PLN02971        435 LGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELM  514 (543)
T ss_pred             hcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchh
Confidence            99999999999999999999631               34788899999999999999999999999998765 356666


Q ss_pred             ccccceeeccCceeEeeccCCCCCCcC
Q 035745          476 EKFGILIKKKEPLVAIPTPRLPNSELY  502 (503)
Q Consensus       476 ~~~~~~~~~~~~~~v~~~~R~~~~~~~  502 (503)
                      ...+ ++..+.++.+.+++| ..+++|
T Consensus       515 ~~~~-~~~~~~~~~~~~~~~-~~~~~~  539 (543)
T PLN02971        515 ESSH-DMFLSKPLVMVGELR-LSEDLY  539 (543)
T ss_pred             hhcC-cccccccceeeeeec-CCcccc
Confidence            6666 553345899999999 446777


No 6  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=2e-70  Score=550.99  Aligned_cols=454  Identities=37%  Similarity=0.705  Sum_probs=368.1

Q ss_pred             CCCCCCCCCCCCccccccccCCCChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCCcccccc
Q 035745           19 NAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLV   98 (503)
Q Consensus        19 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~~~~~~   98 (503)
                      +.+.||||+++|++|+++.+ ..+++.++.+++++||++|++++|+.++++++||+++++++.++...|.+++.......
T Consensus        32 ~~~~pPgp~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~  110 (517)
T PLN02687         32 KRPLPPGPRGWPVLGNLPQL-GPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEH  110 (517)
T ss_pred             CCCCCccCCCCCccccHHhc-CCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhh
Confidence            45679999999999999888 45689999999999999999999999999999999999999987777887754332222


Q ss_pred             cccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHHHHHHHH
Q 035745           99 ASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQN  178 (503)
Q Consensus        99 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~  178 (503)
                      ....+.+++++.+|+.|+++|+.++.+.|+.++++.+.+.+.++++++++.|....   .++++|+.+++..+++++++.
T Consensus       111 ~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~---~~~~vd~~~~~~~~t~dvi~~  187 (517)
T PLN02687        111 MAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQH---GTAPVNLGQLVNVCTTNALGR  187 (517)
T ss_pred             hccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhc---CCCceeHHHHHHHHHHHHHHH
Confidence            22234567788789999999999975789999999999999999999999997542   446799999999999999999


Q ss_pred             HhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 035745          179 MLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVSV  258 (503)
Q Consensus       179 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  258 (503)
                      ++||.++...+..  +....+.+.+..++..........++|++.++......++..+..+.+.+++...++++++..  
T Consensus       188 ~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--  263 (517)
T PLN02687        188 AMVGRRVFAGDGD--EKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAG--  263 (517)
T ss_pred             HHhCccccccCCc--chHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence            9999987543210  223445565565555443322334567665553333345666777888889999888876643  


Q ss_pred             hccCCCCCCCCCCCchhHHHHHHHhhhcc---CCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHHhhC
Q 035745          259 VEGEGGAGNNIEGRNKDFLQLLLELQENE---DSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHN  335 (503)
Q Consensus       259 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L~~~  335 (503)
                       +.      . .....|+++.+++..+++   .++..++++++.+++..+++   ||+     |||+++++|++++|++|
T Consensus       264 -~~------~-~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~---AG~-----eTta~~l~~~l~~L~~~  327 (517)
T PLN02687        264 -QT------G-SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFT---AGT-----DTTSSTVEWAIAELIRH  327 (517)
T ss_pred             -cc------c-CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhc---ccc-----CchHHHHHHHHHHHHhC
Confidence             10      0 123569999999875431   12346999999999999998   999     99999999999999999


Q ss_pred             cHHHHHHHHHHHHhhCCCCccccccCCCChhHHHHHHHhhhcCC-CCCcCcccccCcccccCeeeCCCCEEEEehhhhcc
Q 035745          336 PRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHR  414 (503)
Q Consensus       336 P~~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p-~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~  414 (503)
                      |++|+|+++||+++.+.++.++.+++++||||+|||+||||++| ++..++|.+.+|++++||.|||||.|.++.+++|+
T Consensus       328 P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~  407 (517)
T PLN02687        328 PDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIAR  407 (517)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcC
Confidence            99999999999999987777899999999999999999999999 55557999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCccCCC-----------------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCCC---CCC
Q 035745          415 DPQIWDNPLEFGPEKFLNDG-----------------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTK---LDL  474 (503)
Q Consensus       415 d~~~~~dp~~F~P~R~l~~~-----------------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~  474 (503)
                      ||++|+||++|+||||++.+                 +.|++.|+|++||++|+++++|+|+++|++++.++..   +++
T Consensus       408 d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~  487 (517)
T PLN02687        408 DPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNM  487 (517)
T ss_pred             CcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCc
Confidence            99999999999999998521                 3578899999999999999999999999999987632   222


Q ss_pred             CccccceeeccCceeEeeccCC
Q 035745          475 SEKFGILIKKKEPLVAIPTPRL  496 (503)
Q Consensus       475 ~~~~~~~~~~~~~~~v~~~~R~  496 (503)
                      ....+.+..+..++.+++++|.
T Consensus       488 ~~~~~~~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        488 EEAYGLTLQRAVPLMVHPRPRL  509 (517)
T ss_pred             ccccceeeecCCCeEEeeccCC
Confidence            2334556667778999999995


No 7  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=5.9e-70  Score=547.42  Aligned_cols=456  Identities=34%  Similarity=0.630  Sum_probs=357.2

Q ss_pred             CCCCCCCCCCCCccccccccCCCChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCCcccccc
Q 035745           19 NAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLV   98 (503)
Q Consensus        19 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~~~~~~   98 (503)
                      +.+.||||+++|++|+++.+ ....+.++.+++++||++|++++++.++|+++||+++++|+.++...|..++.......
T Consensus        34 ~~~~ppgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~  112 (516)
T PLN02183         34 RLPYPPGPKGLPIIGNMLMM-DQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISY  112 (516)
T ss_pred             CCCCCcCCCCCCeeccHHhc-CCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhc
Confidence            56889999999999999877 45577889999999999999999999999999999999999987777777654322222


Q ss_pred             cccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHHHHHHHH
Q 035745           99 ASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQN  178 (503)
Q Consensus        99 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~  178 (503)
                      ...++.+++++.+|+.|+++|+.+..++|+.+.++.+.+.+ ++++.+++.+...    .++++|+.+++..+++++++.
T Consensus       113 ~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~----~~~~v~~~~~~~~~~~~vi~~  187 (516)
T PLN02183        113 LTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSN----IGKPVNIGELIFTLTRNITYR  187 (516)
T ss_pred             cccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhc----CCCcEeHHHHHHHHHHHHHHh
Confidence            22223456777789999999999545889999999888864 6788999988642    456899999999999999999


Q ss_pred             HhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 035745          179 MLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVSV  258 (503)
Q Consensus       179 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  258 (503)
                      ++||.+.+..+       ..+.+.+..+...........++|++.++......++..+..+.+.+++...++++.++...
T Consensus       188 ~~fG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  260 (516)
T PLN02183        188 AAFGSSSNEGQ-------DEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKN  260 (516)
T ss_pred             HhhcCcccchH-------HHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            99998764322       33445555444443333344566766554323345667777888888888888877654311


Q ss_pred             hccCCCCCCCCCCCchhHHHHHHHhhhccC---------CcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHH
Q 035745          259 VEGEGGAGNNIEGRNKDFLQLLLELQENED---------SASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTM  329 (503)
Q Consensus       259 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~---------~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l  329 (503)
                      .+   ....+ +....|+++.+++...++.         .+..++++++...+.++++   ||+     |||+++++|++
T Consensus       261 ~~---~~~~~-~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~---AG~-----dTTa~tl~~~l  328 (516)
T PLN02183        261 QN---ADNDS-EEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMF---GGT-----ETVASAIEWAM  328 (516)
T ss_pred             cc---ccccc-ccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHH---cch-----hhHHHHHHHHH
Confidence            10   00000 1134689999998653311         1235899999999999999   999     99999999999


Q ss_pred             HHHhhCcHHHHHHHHHHHHhhCCCCccccccCCCChhHHHHHHHhhhcCCCCCcCcccccCcccccCeeeCCCCEEEEeh
Q 035745          330 TELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNV  409 (503)
Q Consensus       330 ~~L~~~P~~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~  409 (503)
                      ++|++||++|+|+++||+++++.++.++.+++++||||+|||+||||++|+.....|.+.+|++++||.|||||.|.++.
T Consensus       329 ~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~  408 (516)
T PLN02183        329 AELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINA  408 (516)
T ss_pred             HHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEeh
Confidence            99999999999999999999986667899999999999999999999999444467999999999999999999999999


Q ss_pred             hhhccCCCCCCCCCCCCCCCccCCC--------------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCCC---C
Q 035745          410 WAIHRDPQIWDNPLEFGPEKFLNDG--------------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTK---L  472 (503)
Q Consensus       410 ~~~~~d~~~~~dp~~F~P~R~l~~~--------------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~  472 (503)
                      +++||||++|+||++|+||||++++              +.|++.|+|++||++|+++++|+++++|++++.++..   .
T Consensus       409 ~~~hrd~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~  488 (516)
T PLN02183        409 WAIGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSEL  488 (516)
T ss_pred             hhhcCCccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCC
Confidence            9999999999999999999998631              4478899999999999999999999999999877642   2


Q ss_pred             CCCccccceeeccCceeEeeccCCCCCC
Q 035745          473 DLSEKFGILIKKKEPLVAIPTPRLPNSE  500 (503)
Q Consensus       473 ~~~~~~~~~~~~~~~~~v~~~~R~~~~~  500 (503)
                      ......+.+..+..++.+.+++| --|+
T Consensus       489 ~~~~~~~~~~~~~~~~~~~~~~r-~~~~  515 (516)
T PLN02183        489 DMNDVFGLTAPRATRLVAVPTYR-LQCP  515 (516)
T ss_pred             ChhhccccccccCCCcEEEeecC-CCCC
Confidence            22223355544555889999988 4334


No 8  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=7.4e-70  Score=547.88  Aligned_cols=467  Identities=32%  Similarity=0.612  Sum_probs=369.7

Q ss_pred             hccCCCCCCCCCCCCCccccccccCCCChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCCcc
Q 035745           15 SRKANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPI   94 (503)
Q Consensus        15 ~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~~   94 (503)
                      ++..+.+.||||+++|++|++..+ ..+++.++.+++++||++|++++++.+.++++||+++++|+.++...|.+++...
T Consensus        26 ~~~~~~~~ppgp~~~pl~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~  104 (514)
T PLN03112         26 SMRKSLRLPPGPPRWPIVGNLLQL-GPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTL  104 (514)
T ss_pred             cccCCCCCccCCCCCCeeeeHHhc-CCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcc
Confidence            333467899999999999999888 4678999999999999999999999999999999999999988777888765432


Q ss_pred             cccccccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHHHH
Q 035745           95 AGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVC  174 (503)
Q Consensus        95 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~  174 (503)
                      ......++..++++..+|+.|+++|+.+..+.|+.++++.+.+.+.+.++.+++.+.+...  .++++|+.+++..++++
T Consensus       105 ~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~--~~~~vd~~~~~~~~~~~  182 (514)
T PLN03112        105 AAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQ--TGKPVNLREVLGAFSMN  182 (514)
T ss_pred             cceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhc--cCCeeeHHHHHHHHHHH
Confidence            2222222233456677899999999997667899999999999999999999998765432  45689999999999999


Q ss_pred             HHHHHhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q 035745          175 VIQNMLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRN  254 (503)
Q Consensus       175 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  254 (503)
                      +++.++||.++........+....+.+.+..++..........++|++.++......++..+..+.+.+++...++++++
T Consensus       183 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  262 (514)
T PLN03112        183 NVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRR  262 (514)
T ss_pred             HHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999987432210001234455555555544333334445676655433334466677788888888888887765


Q ss_pred             hhhhhccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHHhh
Q 035745          255 KVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMH  334 (503)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L~~  334 (503)
                      ..+.   +     .......|+++.++++.+++ ....++++++.+++..+++   ||+     |||+++++|++++|++
T Consensus       263 ~~~~---~-----~~~~~~~d~l~~ll~~~~~~-~~~~l~~~~i~~~~~~~~~---AG~-----dTTa~~l~~~l~~L~~  325 (514)
T PLN03112        263 ARSG---K-----LPGGKDMDFVDVLLSLPGEN-GKEHMDDVEIKALMQDMIA---AAT-----DTSAVTNEWAMAEVIK  325 (514)
T ss_pred             hhcc---c-----ccCCccchHHHHHHHhhccc-cccCCCHHHHHHHHHHHhc---ccc-----ccHHHHHHHHHHHHHh
Confidence            4310   0     00123469999999865431 2235899999999999998   999     9999999999999999


Q ss_pred             CcHHHHHHHHHHHHhhCCCCccccccCCCChhHHHHHHHhhhcCC-CCCcCcccccCcccccCeeeCCCCEEEEehhhhc
Q 035745          335 NPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIH  413 (503)
Q Consensus       335 ~P~~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p-~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~  413 (503)
                      ||++|+||++||+++++.++.++.+++++||||+|||+||||++| ++..++|.+.+|++++||.|||||.|.++.+++|
T Consensus       326 ~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h  405 (514)
T PLN03112        326 NPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLG  405 (514)
T ss_pred             ChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhh
Confidence            999999999999999987777899999999999999999999999 5555789999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCccCC-----------C------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCC---CCC
Q 035745          414 RDPQIWDNPLEFGPEKFLND-----------G------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGT---KLD  473 (503)
Q Consensus       414 ~d~~~~~dp~~F~P~R~l~~-----------~------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~  473 (503)
                      +||++|+||++|+||||...           .      +.|++.|+|++||++|++++++.|+++|++++.++.   .+.
T Consensus       406 ~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~  485 (514)
T PLN03112        406 RNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDID  485 (514)
T ss_pred             CCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCC
Confidence            99999999999999997542           0      357888999999999999999999999999987653   222


Q ss_pred             CCccccceeeccCceeEeeccCCCCCCcC
Q 035745          474 LSEKFGILIKKKEPLVAIPTPRLPNSELY  502 (503)
Q Consensus       474 ~~~~~~~~~~~~~~~~v~~~~R~~~~~~~  502 (503)
                      .....+++..++.++.+++++|... .+|
T Consensus       486 ~~~~~~~~~~~~~~~~~~~~~r~~~-~~~  513 (514)
T PLN03112        486 TQEVYGMTMPKAKPLRAVATPRLAP-HLY  513 (514)
T ss_pred             CccccCcccccCCCeEEEeecCCcc-ccc
Confidence            3233456666777999999999754 444


No 9  
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=4.2e-69  Score=541.36  Aligned_cols=460  Identities=29%  Similarity=0.483  Sum_probs=348.7

Q ss_pred             HhhccCCCCCCCCCCCCCccccccccCCCChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCC
Q 035745           13 KKSRKANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDP   92 (503)
Q Consensus        13 ~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~   92 (503)
                      ++....+.+.||||+++|++|++..+.....+..+.+++++||+||++++|+++.|+++||+.+++|+.++...|.+++.
T Consensus        22 ~~~~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~  101 (503)
T PLN02394         22 SKLRGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTR  101 (503)
T ss_pred             HHHhcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCC
Confidence            33344568899999999999999887434468899999999999999999999999999999999999887767776543


Q ss_pred             cccccccccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHH
Q 035745           93 PIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTF  172 (503)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~  172 (503)
                      ..........+.+.+++.+|+.|+++|+.+..++|++++++.+.+.+.++++++++.+...... .++.+|+.+++..++
T Consensus       102 ~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~-~~~~v~~~~~~~~~~  180 (503)
T PLN02394        102 NVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEA-ATEGVVIRRRLQLMM  180 (503)
T ss_pred             cchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhc-cCCcEecHHHHHHHH
Confidence            2222222112345677778999999999986689999999999999999999999999764321 244689999999999


Q ss_pred             HHHHHHHhhhhhhhhhhccccchhHHHHHHHHHHHHHhCC--CcccccccccccccccchHHHHHHHHHHHHH-HHHHHH
Q 035745          173 VCVIQNMLWGEALELREKGISNLGAEIKFKLAELVVLMGT--PNISDIIPVLSWLDIQGIEKRTKKISLCFEN-FIDSAV  249 (503)
Q Consensus       173 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~-~~~~~i  249 (503)
                      +++++.++||.+++..+.   +....+.............  ..+..++|++..+ .....+........... +....+
T Consensus       181 ~dvi~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i  256 (503)
T PLN02394        181 YNIMYRMMFDRRFESEDD---PLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICQDVKERRLALFKDYFV  256 (503)
T ss_pred             HHHHHHHHhCCCcccccc---hhHHHHHHHHHHHHHHhcccccchhhhchHHHHH-hhHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999865443   2222332222222222111  1122334443322 11111222222222222 333345


Q ss_pred             HHHHhhhhhhccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHH
Q 035745          250 EQYRNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTM  329 (503)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l  329 (503)
                      +++++..+..+       .......|+++.|++...+    +.++++++...+.++++   ||+     |||+++++|++
T Consensus       257 ~~~~~~~~~~~-------~~~~~~~d~l~~ll~~~~~----~~l~~~~i~~~~~~~~~---AG~-----dTTa~tl~~~l  317 (503)
T PLN02394        257 DERKKLMSAKG-------MDKEGLKCAIDHILEAQKK----GEINEDNVLYIVENINV---AAI-----ETTLWSIEWGI  317 (503)
T ss_pred             HHHHHHhhhcc-------CCcchhhhHHHHHHhcccc----CCCCHHHHHHHHHHHHH---hch-----hhHHHHHHHHH
Confidence            55543221000       0012346899999987543    45899999999988888   999     99999999999


Q ss_pred             HHHhhCcHHHHHHHHHHHHhhCCCCccccccCCCChhHHHHHHHhhhcCC-CCCcCcccccCcccccCeeeCCCCEEEEe
Q 035745          330 TELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILN  408 (503)
Q Consensus       330 ~~L~~~P~~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p-~~~~~~R~~~~d~~l~g~~ip~G~~v~~~  408 (503)
                      ++|++||++|+|||+||+++++.++.++.+++++||||+|||+||||++| ++...+|.+.+|++++||.|||||.|.++
T Consensus       318 ~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~  397 (503)
T PLN02394        318 AELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVN  397 (503)
T ss_pred             HHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEc
Confidence            99999999999999999999987667889999999999999999999999 56656899999999999999999999999


Q ss_pred             hhhhccCCCCCCCCCCCCCCCccCCC---------------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCC-CC
Q 035745          409 VWAIHRDPQIWDNPLEFGPEKFLNDG---------------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGT-KL  472 (503)
Q Consensus       409 ~~~~~~d~~~~~dp~~F~P~R~l~~~---------------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~  472 (503)
                      ++++||||++|+||++|+||||++++               +.|++.|+|++||++|+++++|.++++|++++.+|. .+
T Consensus       398 ~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~  477 (503)
T PLN02394        398 AWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKI  477 (503)
T ss_pred             hHHHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcC
Confidence            99999999999999999999998521               447888999999999999999999999999987775 34


Q ss_pred             CCCcccc-ceeeccCceeEeeccCC
Q 035745          473 DLSEKFG-ILIKKKEPLVAIPTPRL  496 (503)
Q Consensus       473 ~~~~~~~-~~~~~~~~~~v~~~~R~  496 (503)
                      +.....+ +.+..+.++.+++.+|.
T Consensus       478 ~~~~~~~~~~~~~~~~~~~~~~~r~  502 (503)
T PLN02394        478 DVSEKGGQFSLHIAKHSTVVFKPRS  502 (503)
T ss_pred             ccccccCceeeccCCCceEEeecCC
Confidence            5444443 55645569999999996


No 10 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=2.9e-69  Score=539.66  Aligned_cols=447  Identities=22%  Similarity=0.379  Sum_probs=348.0

Q ss_pred             CCCCCCCCCCCCCccccccccCCCChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCCccccc
Q 035745           18 ANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGL   97 (503)
Q Consensus        18 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~~~~~   97 (503)
                      ...+.+|||+++|++|++..+ ..+++.++.+++++||++|++++|+.+.|+++||+++++|+.++...|.+++......
T Consensus        26 ~~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~  104 (482)
T PTZ00404         26 IHKNELKGPIPIPILGNLHQL-GNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIK  104 (482)
T ss_pred             ccCCCCCCCCCCCeeccHhhh-cccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceee
Confidence            357789999999999999888 4579999999999999999999999999999999999999988766676655332221


Q ss_pred             ccccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHHHHHHH
Q 035745           98 VASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQ  177 (503)
Q Consensus        98 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~  177 (503)
                      .. ..+.++ ++.+|+.|+++|+.++ +.|+...++.+.+.+.+.++.+++.|.+...  .++.+|+.+++..+++++++
T Consensus       105 ~~-~~~~~l-~~~~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~~~~dvi~  179 (482)
T PTZ00404        105 HG-TFYHGI-VTSSGEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKKIES--SGETFEPRYYLTKFTMSAMF  179 (482)
T ss_pred             ee-ccCCce-eccChHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHHHHh--cCCccCHHHHHHHHHHHHHH
Confidence            11 124554 4557999999999997 9999999999999999999999999976433  45679999999999999999


Q ss_pred             HHhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 035745          178 NMLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVS  257 (503)
Q Consensus       178 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  257 (503)
                      .++||.+++..+....+....+.+.+..++..........+++++... ...+.+...+..+.+.+++...+++++++. 
T Consensus       180 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-  257 (482)
T PTZ00404        180 KYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL-YYQYLEHTDKNFKKIKKFIKEKYHEHLKTI-  257 (482)
T ss_pred             HHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-
Confidence            999999876432100012244555555555444332222222222211 011112334456667777777666554432 


Q ss_pred             hhccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHHhhCcH
Q 035745          258 VVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPR  337 (503)
Q Consensus       258 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L~~~P~  337 (503)
                        +         .....|+++.+++...+   ....+..++++++.++++   ||+     |||+++++|++++|++||+
T Consensus       258 --~---------~~~~~dll~~ll~~~~~---~~~~~~~~i~~~~~~~~~---AG~-----dTta~~l~~~l~~L~~~P~  315 (482)
T PTZ00404        258 --D---------PEVPRDLLDLLIKEYGT---NTDDDILSILATILDFFL---AGV-----DTSATSLEWMVLMLCNYPE  315 (482)
T ss_pred             --C---------CCCcccHHHHHHHHhcc---CCcccHHHHHHHHHHHHH---hcc-----chHHHHHHHHHHHHHcCcH
Confidence              1         12356899999986532   112223347778888888   999     9999999999999999999


Q ss_pred             HHHHHHHHHHHhhCCCCccccccCCCChhHHHHHHHhhhcCC-CCCcCcccccCcccc-cCeeeCCCCEEEEehhhhccC
Q 035745          338 VMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSI-GGYTVPKDTTIILNVWAIHRD  415 (503)
Q Consensus       338 ~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p-~~~~~~R~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d  415 (503)
                      +|+||++||+++++++..++.+++++||||+|||+||||++| ++..++|.+.+|+++ +||.|||||.|.++.+++|||
T Consensus       316 vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrd  395 (482)
T PTZ00404        316 IQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRN  395 (482)
T ss_pred             HHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCC
Confidence            999999999999987667899999999999999999999999 555579999999999 999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccCCC--------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCccccceeeccCc
Q 035745          416 PQIWDNPLEFGPEKFLNDG--------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKFGILIKKKEP  487 (503)
Q Consensus       416 ~~~~~dp~~F~P~R~l~~~--------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  487 (503)
                      |++||||++|+||||++..        +.|++.|+|++||++|++++++.|+++|++++.++.+.+.....+.+.+| .+
T Consensus       396 p~~~~dP~~F~PeRwl~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~-~~  474 (482)
T PTZ00404        396 EKYFENPEQFDPSRFLNPDSNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLKP-NK  474 (482)
T ss_pred             ccccCCccccCccccCCCCCCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeecC-CC
Confidence            9999999999999998642        55899999999999999999999999999998766544443345666664 58


Q ss_pred             eeEeeccC
Q 035745          488 LVAIPTPR  495 (503)
Q Consensus       488 ~~v~~~~R  495 (503)
                      +.+++++|
T Consensus       475 ~~v~~~~R  482 (482)
T PTZ00404        475 FKVLLEKR  482 (482)
T ss_pred             ceeeeecC
Confidence            99999987


No 11 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.1e-68  Score=536.77  Aligned_cols=452  Identities=30%  Similarity=0.522  Sum_probs=349.3

Q ss_pred             CCCCCCCCCCCCccccccccCCCChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCCcccccc
Q 035745           19 NAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLV   98 (503)
Q Consensus        19 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~~~~~~   98 (503)
                      ..+.||||+++|++|+++.+...+++.++.+++++||++|++++++.++|+++||+++++|+.++...|.+++.......
T Consensus        27 ~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~~  106 (502)
T PLN02966         27 RYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEF  106 (502)
T ss_pred             CCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCcccee
Confidence            56789999999999999887555789999999999999999999999999999999999999987767776554332222


Q ss_pred             cccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHHHHHHHH
Q 035745           99 ASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQN  178 (503)
Q Consensus        99 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~  178 (503)
                      ...+..+..+..+|+.|+++|+.+..++|+..+++.+.+.+.+.++++++.|.....  .++++|+.+++..+++++++.
T Consensus       107 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~--~~~~vdl~~~~~~~t~dvi~~  184 (502)
T PLN02966        107 ISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAAD--KSEVVDISELMLTFTNSVVCR  184 (502)
T ss_pred             eccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCceeHHHHHHHHHHHHHHH
Confidence            222333445566799999999995458999999999999999999999999976433  456899999999999999999


Q ss_pred             HhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCCccccccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 035745          179 MLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLD-IQGIEKRTKKISLCFENFIDSAVEQYRNKVS  257 (503)
Q Consensus       179 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  257 (503)
                      ++||.+++..+.    ....+.+.+...........+..++|++..+. ..++.+......+...+++...+++..... 
T Consensus       185 ~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-  259 (502)
T PLN02966        185 QAFGKKYNEDGE----EMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPK-  259 (502)
T ss_pred             HHhCCccCccch----HHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence            999998864432    23344454444443433333334455433221 122223333445556666666666554321 


Q ss_pred             hhccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHHhhCcH
Q 035745          258 VVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPR  337 (503)
Q Consensus       258 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L~~~P~  337 (503)
                        .       . .....|+++.+++..+++.....++++++..++.++++   ||+     |||+++++|++++|++||+
T Consensus       260 --~-------~-~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~---AG~-----eTta~~l~~~l~~L~~~P~  321 (502)
T PLN02966        260 --R-------V-KPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVV---AGT-----DTAAAAVVWGMTYLMKYPQ  321 (502)
T ss_pred             --c-------c-ccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHh---ccc-----cchHHHHHHHHHHHHhCHH
Confidence              0       0 11345899999977654222345899999999999999   999     9999999999999999999


Q ss_pred             HHHHHHHHHHHhhCC--CCccccccCCCChhHHHHHHHhhhcCC-CCCcCcccccCcccccCeeeCCCCEEEEehhhhcc
Q 035745          338 VMKKVQEELAQVVGM--DSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHR  414 (503)
Q Consensus       338 ~~~klr~Ei~~~~~~--~~~~~~~~l~~lpyl~a~i~EtlRl~p-~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~  414 (503)
                      +|+||++||+++++.  +..++.+++++||||+|||+||||++| ++..++|.+.+|++++||.|||||.|.++++++||
T Consensus       322 ~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~r  401 (502)
T PLN02966        322 VLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSR  401 (502)
T ss_pred             HHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccC
Confidence            999999999999864  235789999999999999999999999 55557899999999999999999999999999999


Q ss_pred             CCCCC-CCCCCCCCCCccCCC-------------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCCC---CCCCcc
Q 035745          415 DPQIW-DNPLEFGPEKFLNDG-------------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTK---LDLSEK  477 (503)
Q Consensus       415 d~~~~-~dp~~F~P~R~l~~~-------------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~  477 (503)
                      ||++| |||++|+||||++.+             +.|++.|+|++||++|+++++|.|+++|++++.++..   +++...
T Consensus       402 dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~  481 (502)
T PLN02966        402 DEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVM  481 (502)
T ss_pred             CcccccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccc
Confidence            99999 999999999998631             3478899999999999999999999999999887742   223333


Q ss_pred             ccceeeccCceeEeeccC
Q 035745          478 FGILIKKKEPLVAIPTPR  495 (503)
Q Consensus       478 ~~~~~~~~~~~~v~~~~R  495 (503)
                      .++...++..+.+..++-
T Consensus       482 ~~~~~~~~~~~~~~~~~~  499 (502)
T PLN02966        482 TGLAMHKSQHLKLVPEKV  499 (502)
T ss_pred             cCeeeccCCCeEEEEEeC
Confidence            455553444565554443


No 12 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1.1e-68  Score=538.58  Aligned_cols=461  Identities=23%  Similarity=0.436  Sum_probs=355.4

Q ss_pred             CCCCCCCCCCCCccccccccC--CCChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCCcccc
Q 035745           19 NAKLPPGPRGLPVIGYLPFLG--TTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAG   96 (503)
Q Consensus        19 ~~~~ppgp~~~p~~G~~~~~~--~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~~~~   96 (503)
                      ..+.||||+++|++|++..+.  ..+++.++.+++++||++|++++|+.+.|+++||+++++++.++...|..++.....
T Consensus        33 ~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~  112 (519)
T PLN00168         33 GRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASS  112 (519)
T ss_pred             CCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccch
Confidence            456899999999999987653  235788999999999999999999999999999999999999888788776543322


Q ss_pred             cccccCCCceEe-CCCChhHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHHHHH
Q 035745           97 LVASFGGNDILF-SNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCV  175 (503)
Q Consensus        97 ~~~~~~~~~~~~-~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~  175 (503)
                      ...+. +.+++. ..+|+.|+++||.+..++|+.++++.+.+.+.+.++.+++.|.....  .++.+|+.+.+..++.++
T Consensus       113 ~~~~~-~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~--~~~~v~~~~~~~~~~~~i  189 (519)
T PLN00168        113 RLLGE-SDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAE--DAAAPRVVETFQYAMFCL  189 (519)
T ss_pred             hhhcc-CCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCCcCHHHHHHHHHHHH
Confidence            22221 122333 36799999999854459999999999999999999999999976433  344689999999999999


Q ss_pred             HHHHhhhhhhhhhhccccchhHHHHHHHHHHHHHh-CCCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q 035745          176 IQNMLWGEALELREKGISNLGAEIKFKLAELVVLM-GTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRN  254 (503)
Q Consensus       176 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  254 (503)
                      ++.++||.+++...      ...+........... ....+..++|++.+.......++..+..+.+.+++...++++++
T Consensus       190 i~~~~fG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  263 (519)
T PLN00168        190 LVLMCFGERLDEPA------VRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARRE  263 (519)
T ss_pred             HHHHHcCCCcChhh------HHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999875321      122323322222211 11223345565433212222345566788888889888888765


Q ss_pred             hhhhhccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHHhh
Q 035745          255 KVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMH  334 (503)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L~~  334 (503)
                      ..+..+..+...........|+++.|++....+..+..++++++.+++.++++   ||+     |||+++++|++++|++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~---AG~-----dTTa~~l~~~l~~L~~  335 (519)
T PLN00168        264 YKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLN---AGT-----DTTSTALQWIMAELVK  335 (519)
T ss_pred             HhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHH---hcc-----hHHHHHHHHHHHHHHh
Confidence            43110000000000011246899999986543222346999999999999999   999     9999999999999999


Q ss_pred             CcHHHHHHHHHHHHhhCC-CCccccccCCCChhHHHHHHHhhhcCC-CCCcCcccccCcccccCeeeCCCCEEEEehhhh
Q 035745          335 NPRVMKKVQEELAQVVGM-DSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAI  412 (503)
Q Consensus       335 ~P~~~~klr~Ei~~~~~~-~~~~~~~~l~~lpyl~a~i~EtlRl~p-~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~  412 (503)
                      ||++|+|+++||+++++. .+.++.+++++||||+|||+||||++| ++..++|.+.+|++++||.|||||.|.++++++
T Consensus       336 ~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~  415 (519)
T PLN00168        336 NPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEM  415 (519)
T ss_pred             CHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHH
Confidence            999999999999999975 356899999999999999999999999 556568999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCccCC------------C------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCCCCCC
Q 035745          413 HRDPQIWDNPLEFGPEKFLND------------G------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDL  474 (503)
Q Consensus       413 ~~d~~~~~dp~~F~P~R~l~~------------~------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~  474 (503)
                      ||||++||||++|+||||++.            .      +.|++.|+|++||++|++++++.|+++|+|++.++.+++.
T Consensus       416 ~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~  495 (519)
T PLN00168        416 GRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDF  495 (519)
T ss_pred             hcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCCh
Confidence            999999999999999999852            0      4478889999999999999999999999999977654444


Q ss_pred             CccccceeeccCceeEeeccCC
Q 035745          475 SEKFGILIKKKEPLVAIPTPRL  496 (503)
Q Consensus       475 ~~~~~~~~~~~~~~~v~~~~R~  496 (503)
                      ....+++..++.++.+++++|+
T Consensus       496 ~~~~~~~~~~~~~~~~~~~~R~  517 (519)
T PLN00168        496 AEKREFTTVMAKPLRARLVPRR  517 (519)
T ss_pred             hhhceeEEeecCCcEEEEEecc
Confidence            3334566777789999999986


No 13 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=2.5e-68  Score=529.22  Aligned_cols=448  Identities=26%  Similarity=0.420  Sum_probs=352.5

Q ss_pred             CCCCCCCCccccccccCCCChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCCcccccccccC
Q 035745           23 PPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLVASFG  102 (503)
Q Consensus        23 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~~~~~~~~~~  102 (503)
                      ||||+++|++|+++++...+++.++.+++++||++|++++++.++++|+||+++++|+.++...|..++...........
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            78999999999998885566899999999999999999999999999999999999999888788776533222212111


Q ss_pred             CCceEeCCCChhHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHHHHHHHHHhhh
Q 035745          103 GNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWG  182 (503)
Q Consensus       103 ~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG  182 (503)
                      +..+.+..+|+.|+++|+.+.+++|+...++.+.+.+.+.++.+++.+.+......++++|+.+.+..+++++++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            22244445689999999988778899888899999999998888888865432214567999999999999999999999


Q ss_pred             hhhhhhhcc-ccch---hHHHHHHHHHHHHHhCCCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 035745          183 EALELREKG-ISNL---GAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVSV  258 (503)
Q Consensus       183 ~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  258 (503)
                      .+.+..... ....   ...+...+..++.......+..++|++.+++...+.+........+.+++...+++++++...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  240 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIAR  240 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            987654311 0000   122233333444433333334567766665433233333333444567777777777654310


Q ss_pred             hccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHHhhCcHH
Q 035745          259 VEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPRV  338 (503)
Q Consensus       259 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L~~~P~~  338 (503)
                                 .....|+++.+++..      ..++++++.+.+.++++   ||+     |||+++++|++++|++||++
T Consensus       241 -----------~~~~~d~l~~ll~~~------~~ls~~~i~~~~~~~~~---ag~-----dtta~~l~~~~~~l~~~p~~  295 (466)
T PLN02655        241 -----------GEERDCYLDFLLSEA------THLTDEQLMMLVWEPII---EAA-----DTTLVTTEWAMYELAKNPDK  295 (466)
T ss_pred             -----------CCCcccHHHHHHhcc------CCCCHHHHHHHHHHHHH---HHH-----HHHHHHHHHHHHHHHcCHHH
Confidence                       113458999999753      34899999999999999   999     99999999999999999999


Q ss_pred             HHHHHHHHHHhhCCCCccccccCCCChhHHHHHHHhhhcCC-CCCcCcccccCcccccCeeeCCCCEEEEehhhhccCCC
Q 035745          339 MKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQ  417 (503)
Q Consensus       339 ~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p-~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~  417 (503)
                      |+|+|+||+++++.+. ++.+++++||||+|||+||||++| ++...+|.+.+|++++||.|||||.|+++.+++||||+
T Consensus       296 ~~~l~~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~  374 (466)
T PLN02655        296 QERLYREIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKK  374 (466)
T ss_pred             HHHHHHHHHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcc
Confidence            9999999999998644 899999999999999999999999 55656899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCccCCC------------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCccccceeecc
Q 035745          418 IWDNPLEFGPEKFLNDG------------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKFGILIKKK  485 (503)
Q Consensus       418 ~~~dp~~F~P~R~l~~~------------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  485 (503)
                      +|+||++|+||||++..            +.|++.|+|++||+.|+++++++||++|++++.++.. ......+++.+++
T Consensus       375 ~~~~p~~F~PeR~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~  453 (466)
T PLN02655        375 RWENPEEWDPERFLGEKYESADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EKEDTVQLTTQKL  453 (466)
T ss_pred             cCCChhccCccccCCCCcccCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cccchhheeEeec
Confidence            99999999999998642            4588999999999999999999999999999876643 2233457778888


Q ss_pred             CceeEeeccCCC
Q 035745          486 EPLVAIPTPRLP  497 (503)
Q Consensus       486 ~~~~v~~~~R~~  497 (503)
                      .++.|++++|..
T Consensus       454 ~~~~~~~~~r~~  465 (466)
T PLN02655        454 HPLHAHLKPRGS  465 (466)
T ss_pred             CCcEEEEeecCC
Confidence            899999998864


No 14 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.2e-68  Score=539.40  Aligned_cols=447  Identities=21%  Similarity=0.323  Sum_probs=347.0

Q ss_pred             CCCCCCCCCCCCccccccccCC------------------CChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHH
Q 035745           19 NAKLPPGPRGLPVIGYLPFLGT------------------TDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVV   80 (503)
Q Consensus        19 ~~~~ppgp~~~p~~G~~~~~~~------------------~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~   80 (503)
                      ..+.||||+++|++||++.+..                  ......+.+++++||++|++++|+.+.|+++||+++++++
T Consensus        40 ~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il  119 (516)
T PLN02290         40 ERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELL  119 (516)
T ss_pred             HHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHH
Confidence            3557999999999999877631                  1233457889999999999999999999999999999999


Q ss_pred             HhcccccccCCCcccccccccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCc
Q 035745           81 RDQDITFANRDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGK  160 (503)
Q Consensus        81 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~  160 (503)
                      .++. .+..++...........|.++ +..+|+.|+++|+.++ +.|+.++++.+.+.+.++++.+++.+....+. ++.
T Consensus       120 ~~~~-~~~~r~~~~~~~~~~~~g~~l-~~~~g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~-~~~  195 (516)
T PLN02290        120 TKYN-TVTGKSWLQQQGTKHFIGRGL-LMANGADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKAVES-GQT  195 (516)
T ss_pred             hcCC-CCCCCcchhhhHHHHHhcCCc-cccCchHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCc
Confidence            8864 344443221111111224454 4557999999999997 89999999999999999999999999764331 335


Q ss_pred             ccchhhhHHHHHHHHHHHHhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCCcccccccccccccccchHHHHHHHHHH
Q 035745          161 PIDVGELSISTFVCVIQNMLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLC  240 (503)
Q Consensus       161 ~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~  240 (503)
                      .+|+.+++..+++++++.++||.++...+        .+.+.+..+............+|++.+++ .+..++.....+.
T Consensus       196 ~vd~~~~~~~~~~~vi~~~~fG~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~p~~~~~p-~~~~~~~~~~~~~  266 (516)
T PLN02290        196 EVEIGEYMTRLTADIISRTEFDSSYEKGK--------QIFHLLTVLQRLCAQATRHLCFPGSRFFP-SKYNREIKSLKGE  266 (516)
T ss_pred             eEEhHHHHHHHHHHHHHHHHcCCccccch--------HHHHHHHHHHHHHHHhhhhhcCchhhhCC-ChhHHHHHHHHHH
Confidence            79999999999999999999998875322        11222222221111111112345444432 2334556667778


Q ss_pred             HHHHHHHHHHHHHhhhhhhccCCCCCCCCCCCchhHHHHHHHhhhcc-CCcCcccHHHHHHHHHHHHHHHhhccccccCC
Q 035745          241 FENFIDSAVEQYRNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENE-DSASSISTIQLKALLVNFIVIVLTGHNFWWNR  319 (503)
Q Consensus       241 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~  319 (503)
                      +.+++.+.++++++......       . .....|+++.+++..... .++..++++++.+++.++++   ||+     |
T Consensus       267 ~~~~~~~~i~~~~~~~~~~~-------~-~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~---AG~-----d  330 (516)
T PLN02290        267 VERLLMEIIQSRRDCVEIGR-------S-SSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFF---AGH-----E  330 (516)
T ss_pred             HHHHHHHHHHHHHHHhhccc-------C-CCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHh---hhH-----H
Confidence            88899998888766431100       0 123468999999865432 12234889999999999999   999     9


Q ss_pred             chHHHHHHHHHHHhhCcHHHHHHHHHHHHhhCCCCccccccCCCChhHHHHHHHhhhcCCCCCcCcccccCcccccCeee
Q 035745          320 HTTTTVEWTMTELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQSSSIGGYTV  399 (503)
Q Consensus       320 tt~~~l~~~l~~L~~~P~~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~l~g~~i  399 (503)
                      ||+++++|++++|++||++|+|+|+||+++++.+ .++++++++||||+|||+||||++|+...++|.+.+|++++||.|
T Consensus       331 Tta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~I  409 (516)
T PLN02290        331 TTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHI  409 (516)
T ss_pred             HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEE
Confidence            9999999999999999999999999999999754 789999999999999999999999944458999999999999999


Q ss_pred             CCCCEEEEehhhhccCCCCC-CCCCCCCCCCccCCC----------CCCccccccHHHHHHHHHHHHHHHHHhccccCCC
Q 035745          400 PKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDG----------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPA  468 (503)
Q Consensus       400 p~G~~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~~----------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~  468 (503)
                      ||||.|.++.+++|+||++| +||++|+||||++..          +.|++.|+|++||++|++++++.|+++|++++.+
T Consensus       410 P~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~  489 (516)
T PLN02290        410 PKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPFAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISD  489 (516)
T ss_pred             CCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCCCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCC
Confidence            99999999999999999999 899999999998531          4588999999999999999999999999999876


Q ss_pred             CCCCCCCccccceeeccCceeEeeccCCC
Q 035745          469 GTKLDLSEKFGILIKKKEPLVAIPTPRLP  497 (503)
Q Consensus       469 ~~~~~~~~~~~~~~~~~~~~~v~~~~R~~  497 (503)
                      +...  ....+.+..|+.++.+++++|+|
T Consensus       490 ~~~~--~~~~~~~~~p~~~~~~~~~~~~~  516 (516)
T PLN02290        490 NYRH--APVVVLTIKPKYGVQVCLKPLNP  516 (516)
T ss_pred             Cccc--CccceeeecCCCCCeEEEEeCCC
Confidence            6321  22235778899999999999986


No 15 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.9e-67  Score=490.02  Aligned_cols=450  Identities=23%  Similarity=0.297  Sum_probs=380.6

Q ss_pred             CCCCCCCCCCCCccccccc---cCCCChHHHHHHHHhhhCCcEEEe-cCCeeEEEeCCHHHHHHHHHhcccccccCC-Cc
Q 035745           19 NAKLPPGPRGLPVIGYLPF---LGTTDLHKTFTELAGAYGPIFKLW-LGNKLCVVVSSPSLVKQVVRDQDITFANRD-PP   93 (503)
Q Consensus        19 ~~~~ppgp~~~p~~G~~~~---~~~~~~~~~~~~~~~kyG~v~~~~-~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~-~~   93 (503)
                      +...+|||+++|++|.+..   ....+.|+....++++|||||+.. +|+...|++.+|++++.++++++. ++.|+ ..
T Consensus        48 ~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~~  126 (519)
T KOG0159|consen   48 PFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLLI  126 (519)
T ss_pred             ChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCccccc
Confidence            5668899999999998873   223679999999999999999999 889999999999999999999873 35553 11


Q ss_pred             c-cc-cccccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHHhhcc-CCCcccchhhhHHH
Q 035745           94 I-AG-LVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKT-GIGKPIDVGELSIS  170 (503)
Q Consensus        94 ~-~~-~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~-~~~~~~d~~~~~~~  170 (503)
                      . .. ....+++..+++...|++|++.|..+++.+++++.++.|.+.++..+++++..+....+. ....+.|+.+.+.+
T Consensus       127 ~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~  206 (519)
T KOG0159|consen  127 EPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYR  206 (519)
T ss_pred             chhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHH
Confidence            1 11 112245666777778999999999999999999999999999999999999999876542 24567899999999


Q ss_pred             HHHHHHHHHhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCCcccccc-cccccccccchHHHHHHHHHHHHHHHHHHH
Q 035745          171 TFVCVIQNMLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDII-PVLSWLDIQGIEKRTKKISLCFENFIDSAV  249 (503)
Q Consensus       171 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  249 (503)
                      +++..||.++||.+++......++....+.+.+..++.......   +. ++++++ .++.++++.++++.+.+++...|
T Consensus       207 wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~---~~p~l~r~~-~t~~wk~~~~~~D~i~~~~~~~I  282 (519)
T KOG0159|consen  207 WSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLM---LMPSLWRYF-PTKVWKDFVRAWDQIFDVGDKYI  282 (519)
T ss_pred             HHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHH---hcchHHHhC-CChHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999888777788888888888887665432   23 444444 56677999999999999999999


Q ss_pred             HHHHhhhhhhccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHH
Q 035745          250 EQYRNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTM  329 (503)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l  329 (503)
                      +...++.+..+.   .    .......+..++..       +.++.+++...+++++.   ||.     |||++++.|+|
T Consensus       283 d~~l~~l~~~~~---~----~~~~~~~l~~~L~~-------~~l~~k~~~~~~~dll~---aGv-----DTTs~tl~~~L  340 (519)
T KOG0159|consen  283 DNALEELEKQDS---A----GSEYTGSLLELLLR-------KELSRKDAKANVMDLLA---AGV-----DTTSNTLLWAL  340 (519)
T ss_pred             HHHHHHHHhccc---c----ccchhHHHHHHHHH-------ccCCHHHHHHHHHHHHH---Hhc-----cchHHHHHHHH
Confidence            999888743221   0    11333444444432       45789999999999999   999     99999999999


Q ss_pred             HHHhhCcHHHHHHHHHHHHhhCC-CCccccccCCCChhHHHHHHHhhhcCCCCCcCcccccCcccccCeeeCCCCEEEEe
Q 035745          330 TELMHNPRVMKKVQEELAQVVGM-DSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILN  408 (503)
Q Consensus       330 ~~L~~~P~~~~klr~Ei~~~~~~-~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~  408 (503)
                      |+|++||++|++|++|+.++++. +..++.+++.++|||+|||+||+||||+..+..|...+|.+++||.|||||.|.++
T Consensus       341 y~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~  420 (519)
T KOG0159|consen  341 YELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLF  420 (519)
T ss_pred             HHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEe
Confidence            99999999999999999999987 67889999999999999999999999977778999999999999999999999999


Q ss_pred             hhhhccCCCCCCCCCCCCCCCccCCC------------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCc
Q 035745          409 VWAIHRDPQIWDNPLEFGPEKFLNDG------------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSE  476 (503)
Q Consensus       409 ~~~~~~d~~~~~dp~~F~P~R~l~~~------------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~  476 (503)
                      .+.+.+||++|++|++|+||||+++.            |-|++.|+|+.||++||.+++|+++++|+++..++.  ++..
T Consensus       421 ~~~~~r~~~~F~~p~~F~PeRWL~~~~~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~--pv~~  498 (519)
T KOG0159|consen  421 LYVLGRNPAYFPDPEEFLPERWLKPSTKTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEE--PVEY  498 (519)
T ss_pred             ehhhccChhhCCCccccChhhhcccccCCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCC--Cccc
Confidence            99999999999999999999999876            447888999999999999999999999999997653  5555


Q ss_pred             cccceeeccCceeEeeccCCC
Q 035745          477 KFGILIKKKEPLVAIPTPRLP  497 (503)
Q Consensus       477 ~~~~~~~~~~~~~v~~~~R~~  497 (503)
                      ...+++.|..++.++|++|+.
T Consensus       499 ~~~~il~P~~~l~f~f~~r~~  519 (519)
T KOG0159|consen  499 VYRFILVPNRPLRFKFRPRNE  519 (519)
T ss_pred             eeEEEEcCCCCcceeeeeCCC
Confidence            678889999999999999863


No 16 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=4.1e-66  Score=517.25  Aligned_cols=459  Identities=27%  Similarity=0.441  Sum_probs=341.7

Q ss_pred             CCCCCCCCCCCCccccccccCCCCh-HHHHHHHHhhh-CCcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCCcccc
Q 035745           19 NAKLPPGPRGLPVIGYLPFLGTTDL-HKTFTELAGAY-GPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAG   96 (503)
Q Consensus        19 ~~~~ppgp~~~p~~G~~~~~~~~~~-~~~~~~~~~ky-G~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~~~~   96 (503)
                      ..+.||||+++|++|+++.+..+.+ ..++++..++| |+||++++|++++|+|+||+++++++.++...|..++.....
T Consensus        38 ~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~  117 (534)
T PLN03018         38 SRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIM  117 (534)
T ss_pred             CCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhh
Confidence            3457999999999999988743223 24566777776 799999999999999999999999999887778887654332


Q ss_pred             cccccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHHHHHH
Q 035745           97 LVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVI  176 (503)
Q Consensus        97 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i  176 (503)
                      ...+.++.++.+..+|+.|+++|+.+++.+++......+.+.+..+++++++.+.+...  .+.++|+.+.+..++++++
T Consensus       118 ~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~~t~~vi  195 (534)
T PLN03018        118 ETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQ--RSETVDVRELSRVYGYAVT  195 (534)
T ss_pred             hhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc--cCCceeHHHHHHHHHHHHH
Confidence            22222233566666799999999999844455555555666666778889998875432  3457999999999999999


Q ss_pred             HHHhhhhhhhhhhccc---cchhHHHHHHHHHHHH---HhCCCccccccc-ccccccccchHHHHHHHHHHHHHHHHHHH
Q 035745          177 QNMLWGEALELREKGI---SNLGAEIKFKLAELVV---LMGTPNISDIIP-VLSWLDIQGIEKRTKKISLCFENFIDSAV  249 (503)
Q Consensus       177 ~~~~fG~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  249 (503)
                      +.++||.++...+...   ......+...+.....   ........+.+| |+.++......++.......+.+++...+
T Consensus       196 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  275 (534)
T PLN03018        196 MRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPII  275 (534)
T ss_pred             HHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHH
Confidence            9999999875422100   0111112212222221   111111112233 44322222333445556677888888888


Q ss_pred             HHHHhhhhhhccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHH
Q 035745          250 EQYRNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTM  329 (503)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l  329 (503)
                      +++++.... +       .......|+++.|++..+++ ....++++++...+.++++   ||+     |||+++++|++
T Consensus       276 ~~~~~~~~~-~-------~~~~~~~d~l~~ll~~~~~~-~~~~ls~~~i~~~~~~~~~---aG~-----dTta~~l~~~l  338 (534)
T PLN03018        276 DERVELWRE-K-------GGKAAVEDWLDTFITLKDQN-GKYLVTPDEIKAQCVEFCI---AAI-----DNPANNMEWTL  338 (534)
T ss_pred             HHHHHHhhh-c-------cCCCCcccHHHHHHHhhccc-CCCCCCHHHHHHHHHHHHH---Hhh-----hHHHHHHHHHH
Confidence            887654310 0       00112468999999865431 1124899999999999999   999     99999999999


Q ss_pred             HHHhhCcHHHHHHHHHHHHhhCCCCccccccCCCChhHHHHHHHhhhcCC-CCCcCcccccCcccccCeeeCCCCEEEEe
Q 035745          330 TELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILN  408 (503)
Q Consensus       330 ~~L~~~P~~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p-~~~~~~R~~~~d~~l~g~~ip~G~~v~~~  408 (503)
                      ++|++||++|+|+++||+++++.++.++.+++.+||||+|||+||||++| ++...+|.+.+|++++||.|||||.|+++
T Consensus       339 ~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~  418 (534)
T PLN03018        339 GEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVC  418 (534)
T ss_pred             HHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEC
Confidence            99999999999999999999987777899999999999999999999999 55555799999999999999999999999


Q ss_pred             hhhhccCCCCCCCCCCCCCCCccCCC------------------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCC
Q 035745          409 VWAIHRDPQIWDNPLEFGPEKFLNDG------------------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGT  470 (503)
Q Consensus       409 ~~~~~~d~~~~~dp~~F~P~R~l~~~------------------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~  470 (503)
                      .+++|+||++|+||++|+||||++.+                  +.|++.|+|++||++|+++++|+|+++|++++.++.
T Consensus       419 ~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~  498 (534)
T PLN03018        419 RPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDF  498 (534)
T ss_pred             hHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCC
Confidence            99999999999999999999998521                  247888999999999999999999999999987653


Q ss_pred             -CCCCCccccceeeccCceeEeeccCCC
Q 035745          471 -KLDLSEKFGILIKKKEPLVAIPTPRLP  497 (503)
Q Consensus       471 -~~~~~~~~~~~~~~~~~~~v~~~~R~~  497 (503)
                       ++++....+.+.. +.++.|++++|..
T Consensus       499 ~~~~~~~~~~~~~~-p~~~~v~~~~R~~  525 (534)
T PLN03018        499 GPLSLEEDDASLLM-AKPLLLSVEPRLA  525 (534)
T ss_pred             CCCCccccccceec-CCCeEEEEEeccc
Confidence             3333333344444 4699999999953


No 17 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.8e-67  Score=527.82  Aligned_cols=442  Identities=31%  Similarity=0.525  Sum_probs=357.4

Q ss_pred             CCCCCCCCccccccccC-CCChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCCcccccc--c
Q 035745           23 PPGPRGLPVIGYLPFLG-TTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLV--A   99 (503)
Q Consensus        23 ppgp~~~p~~G~~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~~~~~~--~   99 (503)
                      ||||+++|++||+..+. .++++.++.+++++||+||+++++++++++|+||+++++|+.++...|..++.......  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            89999999999999985 36789999999999999999999999999999999999999998766665533222221  1


Q ss_pred             ccCCCceEeCCCChhHHHHHHHHHhhcCChh-hHHHHHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHHHHHHHH
Q 035745          100 SFGGNDILFSNYGPEWRKLRKLFMGKLMSNA-SLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQN  178 (503)
Q Consensus       100 ~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~-~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~  178 (503)
                      ...+.++++ .+|+.|+.+|+.++ +.|+.. .+ .+.+.+.+.++.+++.+.+...  .+..+|+.+++..+++++++.
T Consensus        81 ~~~~~~l~~-~~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~~~~d~i~~  155 (463)
T PF00067_consen   81 PFGGKGLFF-SDGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAG--SSGPVDLFDWLRRFALDVIGR  155 (463)
T ss_dssp             HHTTTSSTT-SSHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTT--SESEEEHHHHHHHHHHHHHHH
T ss_pred             ccccccccc-cccccccccccccc-ccccccccc-cccccccccccccccccccccc--ccceeeeeccccccccccccc
Confidence            233455444 45799999999997 777777 66 8999999999999999988654  333799999999999999999


Q ss_pred             HhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCC--cccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 035745          179 MLWGEALELREKGISNLGAEIKFKLAELVVLMGTP--NISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKV  256 (503)
Q Consensus       179 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  256 (503)
                      ++||.+++..+.   +....+.+.+..+.......  .+...+|++.++ .....+....+.+.+.+++...++++++..
T Consensus       156 ~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  231 (463)
T PF00067_consen  156 VLFGKDFGSLDD---EDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL-PTPLFRRFKRARDRLRKYIKEIIEERREEL  231 (463)
T ss_dssp             HHHSSHHHGTTH---HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHSH
T ss_pred             ccccceeeeccc---cccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccc
Confidence            999999875443   22345555555555443221  234456655554 344567777788899999999999988776


Q ss_pred             hhhccCCCCCCCCCCCchhHHHHHHHhh-hccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHHhhC
Q 035745          257 SVVEGEGGAGNNIEGRNKDFLQLLLELQ-ENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHN  335 (503)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L~~~  335 (503)
                      ...          .....|+++.+++.. +.+ .+..++++++.+.+..+++   ||+     |||+++++|++++|++|
T Consensus       232 ~~~----------~~~~~d~l~~ll~~~~~~~-~~~~ls~~~i~~~~~~~~~---ag~-----dtt~~~l~~~l~~L~~~  292 (463)
T PF00067_consen  232 DDG----------DESRRDLLDSLLQASSDSD-GPSGLSDEEIAAELLTLLF---AGH-----DTTASTLSWTLYELAKN  292 (463)
T ss_dssp             HSS----------SSSCSSHHHHHHHHHHTTT-TTSSSSHHHHHHHHHHHHH---HHH-----HHHHHHHHHHHHHHHHS
T ss_pred             ccc----------ccccccccccccccccccc-ccccccccccccccccccc---ccc-----ccccccccccccccccc
Confidence            110          236789999999987 221 1147999999999999999   999     99999999999999999


Q ss_pred             cHHHHHHHHHHHHhhCCCCccccccCCCChhHHHHHHHhhhcCCCCC-cCcccccCcccccCeeeCCCCEEEEehhhhcc
Q 035745          336 PRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPY-LVPRRASQSSSIGGYTVPKDTTIILNVWAIHR  414 (503)
Q Consensus       336 P~~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~-~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~  414 (503)
                      |++|+||++||+++.+.++.++.+++++||||+|||+||||++|+.. .++|.+.+|++++||.|||||.|+++++++|+
T Consensus       293 P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~  372 (463)
T PF00067_consen  293 PEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHR  372 (463)
T ss_dssp             HHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999976778999999999999999999999999444 78999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCccCCC-------------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCccccce
Q 035745          415 DPQIWDNPLEFGPEKFLNDG-------------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKFGIL  481 (503)
Q Consensus       415 d~~~~~dp~~F~P~R~l~~~-------------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  481 (503)
                      ||++|+||++|+||||++.+             |.|++.|+|++||++|+++++|.||++||++++++...........+
T Consensus       373 d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  452 (463)
T PF00067_consen  373 DPEYFPDPDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGF  452 (463)
T ss_dssp             STTTSSSTTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCce
Confidence            99999999999999999874             34788999999999999999999999999999776444433333233


Q ss_pred             eeccCceeEee
Q 035745          482 IKKKEPLVAIP  492 (503)
Q Consensus       482 ~~~~~~~~v~~  492 (503)
                      +.|+.++.|.|
T Consensus       453 ~~~~~~~~~~~  463 (463)
T PF00067_consen  453 LLPPKPLKVKF  463 (463)
T ss_dssp             SEEESSSEEEE
T ss_pred             EeeCCCcEEeC
Confidence            44556788765


No 18 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=3.6e-66  Score=512.50  Aligned_cols=446  Identities=28%  Similarity=0.462  Sum_probs=351.1

Q ss_pred             CCCCCCCCCCCCccccccccCCC--ChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCCcccc
Q 035745           19 NAKLPPGPRGLPVIGYLPFLGTT--DLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAG   96 (503)
Q Consensus        19 ~~~~ppgp~~~p~~G~~~~~~~~--~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~~~~   96 (503)
                      ....||||+++|++|++..+...  +...++.++..+||++|+.|+||.+.++++||+.+++|+.++.....+.+.....
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            46789999999999999887533  6788999999999999999999999999999999999997544444333322211


Q ss_pred             cccccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHHHHHH
Q 035745           97 LVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVI  176 (503)
Q Consensus        97 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i  176 (503)
                       .....|.|+++.. |+.|+++||+++ +.|+...++.+...+.+.+..+...+.....   ++.+|+.+++.++++|++
T Consensus       113 -~~~~lG~gll~~~-g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~---~~~vd~~~~~~~~tld~i  186 (497)
T KOG0157|consen  113 -LKPWLGDGLLFSD-GEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELAAS---GEEVDLQDLLKRLTLDII  186 (497)
T ss_pred             -HHHHhcCccccCC-chHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCeEcHHHHHHHHHHHHH
Confidence             2233466777776 999999999997 9999999999999998888888888776432   223999999999999999


Q ss_pred             HHHhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCCccccccc-ccccccccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 035745          177 QNMLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIP-VLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNK  255 (503)
Q Consensus       177 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  255 (503)
                      +.++||......+.   +...++...+........   .....| +..++......++..++.+.+.+++.+.|++++++
T Consensus       187 ~~~~~G~~~~~~~~---~~~~~~~~a~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~  260 (497)
T KOG0157|consen  187 CKTAMGPESLDAEG---PELFEYVQAFDDLTELIS---KRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREE  260 (497)
T ss_pred             HHHhcCCccccccC---CcccHHHHHHHHHHHHHH---HHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999932211111   223344444444333322   122334 33333223356888999999999999999999877


Q ss_pred             hhhhccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHHhhC
Q 035745          256 VSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHN  335 (503)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L~~~  335 (503)
                      ...++.   .+   .....|+++.+....     +..++++++.+++.++++   ||+     |||+++++|++++|+.|
T Consensus       261 ~~~~~~---~~---~~~~~d~L~~~~~~~-----~~~l~~~~i~d~v~tf~f---aG~-----DTTss~ltw~l~~La~h  321 (497)
T KOG0157|consen  261 LEKEGS---GE---EKKRLDFLDTLLLEE-----DKPLTDEDIRDEVDTFMF---AGH-----DTTSSALTWTLWLLAKH  321 (497)
T ss_pred             HHhcCC---cc---cchhhhHHHHHHHhc-----cCCCCHHHHHHHHHHhee---ecc-----chHHHHHHHHHHHHhcC
Confidence            532110   00   135678888633222     157999999999999999   999     99999999999999999


Q ss_pred             cHHHHHHHHHHHHhhCCC-CccccccCCCChhHHHHHHHhhhcCCCCCcCcccccCcccc-cCeeeCCCCEEEEehhhhc
Q 035745          336 PRVMKKVQEELAQVVGMD-SCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQSSSI-GGYTVPKDTTIILNVWAIH  413 (503)
Q Consensus       336 P~~~~klr~Ei~~~~~~~-~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~l-~g~~ip~G~~v~~~~~~~~  413 (503)
                      |++|+|+++|++++++.+ ..++..+.++|+||++||+|||||+|+...+.|.+.+|+++ +||.||||+.|.++++++|
T Consensus       322 P~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~  401 (497)
T KOG0157|consen  322 PEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALH  401 (497)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhc
Confidence            999999999999999743 33344444479999999999999999666688999999999 5899999999999999999


Q ss_pred             cCCCCC-CCCCCCCCCCccCCC-------------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCcccc
Q 035745          414 RDPQIW-DNPLEFGPEKFLNDG-------------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKFG  479 (503)
Q Consensus       414 ~d~~~~-~dp~~F~P~R~l~~~-------------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~  479 (503)
                      ||+++| +||++|+||||+++.             ++|++.|+|++||++||++++++++++|+|+++.+..  ......
T Consensus       402 r~~~~~~~dp~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~--~~~~~~  479 (497)
T KOG0157|consen  402 RDPRVWGEDPEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK--PKPVPE  479 (497)
T ss_pred             cCccccCCChhhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC--ceeeeE
Confidence            999999 599999999999531             3478899999999999999999999999999887743  445578


Q ss_pred             ceeeccCceeEeeccCCC
Q 035745          480 ILIKKKEPLVAIPTPRLP  497 (503)
Q Consensus       480 ~~~~~~~~~~v~~~~R~~  497 (503)
                      .+++|+.++.|++++|..
T Consensus       480 ~~l~~~~gl~v~~~~r~~  497 (497)
T KOG0157|consen  480 LTLRPKNGLKVKLRPRGS  497 (497)
T ss_pred             EEEEecCCeEEEEEeCCC
Confidence            899999999999999963


No 19 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=5.7e-66  Score=516.15  Aligned_cols=425  Identities=18%  Similarity=0.277  Sum_probs=326.9

Q ss_pred             CCCCCCCCCCCCCccccccccC----CCChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCCc
Q 035745           18 ANAKLPPGPRGLPVIGYLPFLG----TTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPP   93 (503)
Q Consensus        18 ~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~   93 (503)
                      .+.+.||||+++|++||++.+.    .+.++.++.+++++||++|++++|++++|+++||+++++|+.+++..|..+...
T Consensus        35 ~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~  114 (490)
T PLN02500         35 KRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPR  114 (490)
T ss_pred             CCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCch
Confidence            3467899999999999976432    245778899999999999999999999999999999999999877667544221


Q ss_pred             ccccccccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHH-HHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHH
Q 035745           94 IAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDA-CYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTF  172 (503)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~  172 (503)
                      .....  . |.+.++..+|+.|+++|+.++ +.|++.+++. +.+.+.+.+..+++.|.      .+..+|+.+.+..++
T Consensus       115 ~~~~~--~-g~~~~~~~~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~vd~~~~~~~~~  184 (490)
T PLN02500        115 SIGGI--L-GKWSMLVLVGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWK------ENSTFSAQDEAKKFT  184 (490)
T ss_pred             HHHHH--h-CcccccccCCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhC------CCCCEEehHHHHHHH
Confidence            11111  1 222344457999999999997 8899988887 56777777777777664      334689999999999


Q ss_pred             HHHHHHHhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 035745          173 VCVIQNMLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQY  252 (503)
Q Consensus       173 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  252 (503)
                      ++++++++||.+.+..+      ...+...+.........  ....+|..       ..++..+..+.+.+++.+.++++
T Consensus       185 ~~vi~~~~fg~~~~~~~------~~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~~~~~~~~~i~~~  249 (490)
T PLN02500        185 FNLMAKHIMSMDPGEEE------TEQLKKEYVTFMKGVVS--APLNFPGT-------AYRKALKSRATILKFIERKMEER  249 (490)
T ss_pred             HHHHHHHHhCCCCCchH------HHHHHHHHHHHHhhhhc--chhcCCCc-------ccHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998754321      12222222222221110  01112221       12455566788888888888887


Q ss_pred             HhhhhhhccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHH
Q 035745          253 RNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTEL  332 (503)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L  332 (503)
                      +++....+       . .....|+++.+++.       ..++++++.+++.++++   ||+     |||+++++|++++|
T Consensus       250 ~~~~~~~~-------~-~~~~~d~l~~ll~~-------~~ls~~~i~~~~~~ll~---AG~-----dTta~tl~~~l~~L  306 (490)
T PLN02500        250 IEKLKEED-------E-SVEEDDLLGWVLKH-------SNLSTEQILDLILSLLF---AGH-----ETSSVAIALAIFFL  306 (490)
T ss_pred             HHhhhccc-------C-CCCcchHHHHHHhc-------cCCCHHHHHHHHHHHHH---hhh-----hHHHHHHHHHHHHH
Confidence            66431100       0 11346899999873       24899999999999999   999     99999999999999


Q ss_pred             hhCcHHHHHHHHHHHHhhC-----CCCccccccCCCChhHHHHHHHhhhcCCCCCcCcccccCcccccCeeeCCCCEEEE
Q 035745          333 MHNPRVMKKVQEELAQVVG-----MDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIIL  407 (503)
Q Consensus       333 ~~~P~~~~klr~Ei~~~~~-----~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~  407 (503)
                      ++||++|+|+|+||+++++     ++..++.+++++||||+|||+||||++|+...++|.+.+|++++||.|||||.|++
T Consensus       307 ~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~  386 (490)
T PLN02500        307 QGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLP  386 (490)
T ss_pred             hhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEe
Confidence            9999999999999999864     23457899999999999999999999995445789999999999999999999999


Q ss_pred             ehhhhccCCCCCCCCCCCCCCCccCCC-------------------CCCccccccHHHHHHHHHHHHHHHHHhccccCCC
Q 035745          408 NVWAIHRDPQIWDNPLEFGPEKFLNDG-------------------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPA  468 (503)
Q Consensus       408 ~~~~~~~d~~~~~dp~~F~P~R~l~~~-------------------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~  468 (503)
                      +.+++||||++|+||++|+||||++++                   +.|++.|+|++||++|+++++|+|+++|+|++.+
T Consensus       387 ~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~  466 (490)
T PLN02500        387 VIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAE  466 (490)
T ss_pred             chhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcC
Confidence            999999999999999999999998531                   3478889999999999999999999999999876


Q ss_pred             CCCCCCCccccceeeccCceeEeecc
Q 035745          469 GTKLDLSEKFGILIKKKEPLVAIPTP  494 (503)
Q Consensus       469 ~~~~~~~~~~~~~~~~~~~~~v~~~~  494 (503)
                      +... ..  ...+ .++.++.|++++
T Consensus       467 ~~~~-~~--~~~~-~~~~~l~~~~~~  488 (490)
T PLN02500        467 ADQA-FA--FPFV-DFPKGLPIRVRR  488 (490)
T ss_pred             CCcc-ee--cccc-cCCCCceEEEEe
Confidence            6332 11  2222 445688888875


No 20 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=2e-65  Score=508.14  Aligned_cols=420  Identities=18%  Similarity=0.246  Sum_probs=330.6

Q ss_pred             CCCCCCCCCCCCccccccccCCCChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCCcccccc
Q 035745           19 NAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLV   98 (503)
Q Consensus        19 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~~~~~~   98 (503)
                      ..+.||||+++|++||+..+ .++++.++++++++||++|+++++++++++++||+++++|+.++...|..+......  
T Consensus        29 r~~~ppgp~~~P~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~--  105 (463)
T PLN02774         29 KKGLPPGTMGWPLFGETTEF-LKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSML--  105 (463)
T ss_pred             CCCCCCCCCCCCchhhHHHH-HHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHH--
Confidence            45788999999999998877 456778999999999999999999999999999999999998876666443221111  


Q ss_pred             cccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHH-HHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHHHHHHH
Q 035745           99 ASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDA-CYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQ  177 (503)
Q Consensus        99 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~  177 (503)
                       ...|.+.+++.+|+.|+++|+.++ +.|++..++. +.+.+.+.+++++++|.      .++++|+.+.+..+++++++
T Consensus       106 -~~lg~~~~~~~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~~  177 (463)
T PLN02774        106 -DILGTCNIAAVHGSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWD------GLKTIDIQEKTKEMALLSAL  177 (463)
T ss_pred             -HHhCccchhhcCCHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhC------CCCCEEeeHHHHHHHHHHHH
Confidence             112333445567999999999997 8899998876 78888888888887774      33568999999999999999


Q ss_pred             HHhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 035745          178 NMLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVS  257 (503)
Q Consensus       178 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  257 (503)
                      .++||.+.....       ..+.+.+.....  ...    .+|.  +++ ....++..++.+.+.+++.+.+++++++. 
T Consensus       178 ~~~~g~~~~~~~-------~~~~~~~~~~~~--~~~----~~~~--~lp-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-  240 (463)
T PLN02774        178 KQIAGTLSKPIS-------EEFKTEFFKLVL--GTL----SLPI--DLP-GTNYRSGVQARKNIVRMLRQLIQERRASG-  240 (463)
T ss_pred             HHHcCCCChHHH-------HHHHHHHHHHhc--ccc----cCCc--CCC-ChhhhHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence            999997643221       122222222111  111    1121  111 11235556678888888888888765431 


Q ss_pred             hhccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHHhhCcH
Q 035745          258 VVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPR  337 (503)
Q Consensus       258 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L~~~P~  337 (503)
                                   ....|+++.+++...+   +..++++++.+++.++++   ||+     |||+++++|++++|++||+
T Consensus       241 -------------~~~~d~l~~ll~~~~~---~~~~s~~ei~~~~~~ll~---Ag~-----dTt~~~l~w~l~~L~~~P~  296 (463)
T PLN02774        241 -------------ETHTDMLGYLMRKEGN---RYKLTDEEIIDQIITILY---SGY-----ETVSTTSMMAVKYLHDHPK  296 (463)
T ss_pred             -------------CCcccHHHHHHhCccC---CCCCCHHHHHHHHHHHHH---hcc-----hhHHHHHHHHHHHHHcCHH
Confidence                         1346899999974322   335899999999999999   999     9999999999999999999


Q ss_pred             HHHHHHHHHHHhhCC---CCccccccCCCChhHHHHHHHhhhcCCCCCcCcccccCcccccCeeeCCCCEEEEehhhhcc
Q 035745          338 VMKKVQEELAQVVGM---DSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHR  414 (503)
Q Consensus       338 ~~~klr~Ei~~~~~~---~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~  414 (503)
                      +|+|+++||+++++.   +..++++++++||||+|||+|+||++|+...+.|.+.+|++++||.||||+.|+++.+++|+
T Consensus       297 ~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~r  376 (463)
T PLN02774        297 ALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINY  376 (463)
T ss_pred             HHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcC
Confidence            999999999999863   34678999999999999999999999954467899999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCccCCC----------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCccccceeec
Q 035745          415 DPQIWDNPLEFGPEKFLNDG----------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKFGILIKK  484 (503)
Q Consensus       415 d~~~~~dp~~F~P~R~l~~~----------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  484 (503)
                      ||++|+||++|+||||++++          |.|++.|+|++||++|++++++.|+++|++++.++.++..    ..++.|
T Consensus       377 dp~~~~dP~~F~PeRfl~~~~~~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~~----~~~~~p  452 (463)
T PLN02774        377 DPFLYPDPMTFNPWRWLDKSLESHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLMK----FPRVEA  452 (463)
T ss_pred             CcccCCChhccCchhcCCCCcCCCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcccc----CCCCCC
Confidence            99999999999999998532          4588999999999999999999999999999977643211    123447


Q ss_pred             cCceeEeecc
Q 035745          485 KEPLVAIPTP  494 (503)
Q Consensus       485 ~~~~~v~~~~  494 (503)
                      +.++.|++++
T Consensus       453 ~~g~~~~~~~  462 (463)
T PLN02774        453 PNGLHIRVSP  462 (463)
T ss_pred             CCCceEEeee
Confidence            7889998873


No 21 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.5e-64  Score=500.75  Aligned_cols=431  Identities=18%  Similarity=0.219  Sum_probs=334.0

Q ss_pred             cCCCCCCCCCCCCCccccccccC----CCChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCC
Q 035745           17 KANAKLPPGPRGLPVIGYLPFLG----TTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDP   92 (503)
Q Consensus        17 ~~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~   92 (503)
                      +.+.+.||||.++|++|+++.+.    ..+++.++.+++++||+||++++++++.|+++||+++++++.++...|..+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            34677899999999999988763    24689999999999999999999999999999999999999988777765432


Q ss_pred             cccccccccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHH-HHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHH
Q 035745           93 PIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDA-CYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSIST  171 (503)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~  171 (503)
                      .....   ..|.+.++..+|+.|+++|+++. +.|+...+.. +.+.+.+.++++++.+.      .+..+|+.+.+..+
T Consensus        83 ~~~~~---l~g~~~~~~~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~  152 (452)
T PLN03141         83 KSLTE---LMGKSSILLINGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSWR------DDPPVLVQDETKKI  152 (452)
T ss_pred             hhHHH---HhCcccccccCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhcc------CCCCEEhHHHHHHH
Confidence            11111   12334455667999999999997 7787777765 34556566555555542      34578999999999


Q ss_pred             HHHHHHHHhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHH
Q 035745          172 FVCVIQNMLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQ  251 (503)
Q Consensus       172 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  251 (503)
                      +++++++++||.+.+...       ..+...+..+......  +...+|.      .. .++..++.+.+.+++...+++
T Consensus       153 ~~~vi~~~~~G~~~~~~~-------~~~~~~~~~~~~~~~~--~~~~~p~------~~-~~~~~~~~~~l~~~~~~~i~~  216 (452)
T PLN03141        153 AFEVLVKALISLEPGEEM-------EFLKKEFQEFIKGLMS--LPIKLPG------TR-LYRSLQAKKRMVKLVKKIIEE  216 (452)
T ss_pred             HHHHHHHHHcCCCchHHH-------HHHHHHHHHHhhhHHh--CccCCCc------hH-hHHHHHHHHHHHHHHHHHHHH
Confidence            999999999997653221       2222222222221111  1111121      11 234456788889999999988


Q ss_pred             HHhhhhhhccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHH
Q 035745          252 YRNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTE  331 (503)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~  331 (503)
                      +++......    .  .......|+++.+++..     +..++++++..++.++++   ||+     |||+++++|++++
T Consensus       217 ~~~~~~~~~----~--~~~~~~~d~l~~ll~~~-----~~~l~~~~i~~~~~~ll~---Ag~-----dTts~tl~~~~~~  277 (452)
T PLN03141        217 KRRAMKNKE----E--DETGIPKDVVDVLLRDG-----SDELTDDLISDNMIDMMI---PGE-----DSVPVLMTLAVKF  277 (452)
T ss_pred             HHHHHhccC----c--cccCChhhHHHHHHhcC-----CCCCCHHHHHHHHHHHHH---hcc-----hhHHHHHHHHHHH
Confidence            775531100    0  00012468999999753     245899999999999999   999     9999999999999


Q ss_pred             HhhCcHHHHHHHHHHHHhhC----CCCccccccCCCChhHHHHHHHhhhcCCCCCcCcccccCcccccCeeeCCCCEEEE
Q 035745          332 LMHNPRVMKKVQEELAQVVG----MDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIIL  407 (503)
Q Consensus       332 L~~~P~~~~klr~Ei~~~~~----~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~  407 (503)
                      |++||++|+++++|++++.+    .+..++.+++.+||||+|||+|+||++|+...++|.+.+|++++||.||||+.|++
T Consensus       278 L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~  357 (452)
T PLN03141        278 LSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLA  357 (452)
T ss_pred             HHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEE
Confidence            99999999999999988753    24457888999999999999999999995556889999999999999999999999


Q ss_pred             ehhhhccCCCCCCCCCCCCCCCccCCC---------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCccc
Q 035745          408 NVWAIHRDPQIWDNPLEFGPEKFLNDG---------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKF  478 (503)
Q Consensus       408 ~~~~~~~d~~~~~dp~~F~P~R~l~~~---------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~  478 (503)
                      +.+++|+||++|+||++|+||||++..         |.|++.|+|++||++|+++++|.|+++|++++.++.. .    .
T Consensus       358 ~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~-~----~  432 (452)
T PLN03141        358 YFRSVHLDEENYDNPYQFNPWRWQEKDMNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTI-V----N  432 (452)
T ss_pred             ehHhccCCchhcCCccccCcccccCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCe-e----e
Confidence            999999999999999999999998642         5588999999999999999999999999999876532 1    1


Q ss_pred             cceeeccCceeEeeccCCC
Q 035745          479 GILIKKKEPLVAIPTPRLP  497 (503)
Q Consensus       479 ~~~~~~~~~~~v~~~~R~~  497 (503)
                      ..+++|..++.|++++|+.
T Consensus       433 ~~~~~~~~~~~~~~~~~~~  451 (452)
T PLN03141        433 FPTVRMKRKLPIWVTRIDD  451 (452)
T ss_pred             cccccCCCCceEEEEeCCC
Confidence            2467888999999999964


No 22 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1.3e-64  Score=501.79  Aligned_cols=420  Identities=19%  Similarity=0.278  Sum_probs=333.8

Q ss_pred             CCCCCCCCCCCCCccccccccCCCChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCCccccc
Q 035745           18 ANAKLPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGL   97 (503)
Q Consensus        18 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~~~~~   97 (503)
                      +..+.||||+++|++|++..+..++++.++.+++++||++|+++++++++|+++||+++++++.++.+.|.  +......
T Consensus        32 ~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~~~  109 (463)
T PLN02196         32 TKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPASK  109 (463)
T ss_pred             CCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCchHH
Confidence            34667888888999999877645789999999999999999999999999999999999999988766663  2111111


Q ss_pred             ccccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHHHHHHH
Q 035745           98 VASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQ  177 (503)
Q Consensus        98 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~  177 (503)
                      ... .|...++..+|+.|+++|++++ +.|++++++.+.+.+.+.++++++.|.       ++.+|+.+++..+++++++
T Consensus       110 ~~~-~g~~~l~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~v~~  180 (463)
T PLN02196        110 ERM-LGKQAIFFHQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWE-------GTQINTYQEMKTYTFNVAL  180 (463)
T ss_pred             HHH-cCcccccccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCC-------CCeEEeHHHHHHHHHHHHH
Confidence            111 2333455567999999999998 899999999999999999999988773       3468999999999999999


Q ss_pred             HHhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 035745          178 NMLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVS  257 (503)
Q Consensus       178 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  257 (503)
                      .++||.+.....       ..+.+....+.    ..  ...+|+.  + .....++..++.+.+.+++.+.++++++.. 
T Consensus       181 ~~~fG~~~~~~~-------~~~~~~~~~~~----~~--~~~~~~~--~-p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~-  243 (463)
T PLN02196        181 LSIFGKDEVLYR-------EDLKRCYYILE----KG--YNSMPIN--L-PGTLFHKSMKARKELAQILAKILSKRRQNG-  243 (463)
T ss_pred             HHHcCCCCchHH-------HHHHHHHHHHh----cc--hhccccc--C-CCccchHHHHHHHHHHHHHHHHHHHHhhcC-
Confidence            999998753211       11222111111    00  1112321  1 111235566777888888888887765431 


Q ss_pred             hhccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHHhhCcH
Q 035745          258 VVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPR  337 (503)
Q Consensus       258 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L~~~P~  337 (503)
                                   ....|+++.+++.      ..+++++++...+.++++   ||+     |||+++++|++++|++||+
T Consensus       244 -------------~~~~d~l~~ll~~------~~~l~~~ei~~~~~~~~~---Ag~-----dTta~~l~~~l~~L~~~P~  296 (463)
T PLN02196        244 -------------SSHNDLLGSFMGD------KEGLTDEQIADNIIGVIF---AAR-----DTTASVLTWILKYLAENPS  296 (463)
T ss_pred             -------------CCcccHHHHHHhc------CCCCCHHHHHHHHHHHHH---hhh-----HHHHHHHHHHHHHHHhCHH
Confidence                         1346899988852      246899999999999998   999     9999999999999999999


Q ss_pred             HHHHHHHHHHHhhCC---CCccccccCCCChhHHHHHHHhhhcCCCCCcCcccccCcccccCeeeCCCCEEEEehhhhcc
Q 035745          338 VMKKVQEELAQVVGM---DSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHR  414 (503)
Q Consensus       338 ~~~klr~Ei~~~~~~---~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~  414 (503)
                      +|+||++|++++.+.   ++.++.+++++||||+|||+||||++|+.....|.+.+|++++||.|||||.|+++.+++|+
T Consensus       297 vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~r  376 (463)
T PLN02196        297 VLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHH  376 (463)
T ss_pred             HHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcC
Confidence            999999999998863   35678899999999999999999999955456799999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCccCCC--------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCccccceeeccC
Q 035745          415 DPQIWDNPLEFGPEKFLNDG--------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKFGILIKKKE  486 (503)
Q Consensus       415 d~~~~~dp~~F~P~R~l~~~--------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  486 (503)
                      ||++|+||++|+||||++..        +.|++.|+|++||++|++++++.|+++|++++.+++ ..+  ....+..|+.
T Consensus       377 d~~~~~dP~~F~PeRfl~~~~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~--~~~~~~~p~~  453 (463)
T PLN02196        377 SADIFSDPGKFDPSRFEVAPKPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS-NGI--QYGPFALPQN  453 (463)
T ss_pred             CchhcCCcCccChhhhcCCCCCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC-Cce--EEcccccCCC
Confidence            99999999999999998642        458999999999999999999999999999987652 223  2344567888


Q ss_pred             ceeEeeccC
Q 035745          487 PLVAIPTPR  495 (503)
Q Consensus       487 ~~~v~~~~R  495 (503)
                      ++.|+++++
T Consensus       454 ~~~~~~~~~  462 (463)
T PLN02196        454 GLPIALSRK  462 (463)
T ss_pred             CceEEEecC
Confidence            999998864


No 23 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=2e-64  Score=508.26  Aligned_cols=447  Identities=19%  Similarity=0.252  Sum_probs=331.3

Q ss_pred             CCCCCCCCCccccccccCCCChHHHHHHHHhhh---CCcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCCcccccc
Q 035745           22 LPPGPRGLPVIGYLPFLGTTDLHKTFTELAGAY---GPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLV   98 (503)
Q Consensus        22 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~ky---G~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~~~~~~   98 (503)
                      .+|||+++|++|+++.+. .+ +..+.++.++|   |++|++++++++.++++||+++++|+.++...|.+...... ..
T Consensus        31 ~~pgp~~~p~~G~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~-~~  107 (516)
T PLN03195         31 NRKGPKSWPIIGAALEQL-KN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHS-YM  107 (516)
T ss_pred             ccCCCCCCCeecchHHHH-hc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHH-HH
Confidence            479999999999986552 22 34566777777   89999999999999999999999999876445654422110 11


Q ss_pred             cccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHHHHHHH-HHHHHHHHHHHHHhhccCCCcccchhhhHHHHHHHHHH
Q 035745           99 ASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALR-KQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQ  177 (503)
Q Consensus        99 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i-~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~  177 (503)
                      ....|.+ +++.+|+.|+++|+.++ +.|+.++++.+.+.+ .+.++.+.+.+.+...  .+.++|+.+++..+++++++
T Consensus       108 ~~~~g~~-l~~~~g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~~~~dvi~  183 (516)
T PLN03195        108 EVLLGDG-IFNVDGELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQASF--ANQVVDMQDLFMRMTLDSIC  183 (516)
T ss_pred             HHHhcCe-eeccCcHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCeEcHHHHHHHHHHHHHH
Confidence            1122455 45567999999999997 889999999999876 5556677776654322  45679999999999999999


Q ss_pred             HHhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 035745          178 NMLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVS  257 (503)
Q Consensus       178 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  257 (503)
                      .++||.+++..+.+..  ...+.+.+............ ..++.+..+......++..+..+.+.+++...+++++++..
T Consensus       184 ~~~fG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  260 (516)
T PLN03195        184 KVGFGVEIGTLSPSLP--ENPFAQAFDTANIIVTLRFI-DPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMD  260 (516)
T ss_pred             HHHhCCCccccccCCC--ccHHHHHHHHHHHHHHHHHh-cchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999998875442110  11233333322211100000 01111111111122344556777788888888887765531


Q ss_pred             hhccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHHhhCcH
Q 035745          258 VVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPR  337 (503)
Q Consensus       258 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L~~~P~  337 (503)
                      ..+  .    .......|+++.+++..++  ++..++++++.+++.++++   ||+     |||+++++|++++|++||+
T Consensus       261 ~~~--~----~~~~~~~d~l~~ll~~~~~--~~~~l~~~~i~~~~~~ll~---AG~-----dTTa~tl~~~l~~L~~~P~  324 (516)
T PLN03195        261 EAR--K----SGKKVKHDILSRFIELGED--PDSNFTDKSLRDIVLNFVI---AGR-----DTTATTLSWFVYMIMMNPH  324 (516)
T ss_pred             ccc--c----ccccccccHHHHHHhccCC--CCCCCCHHHHHHHHHHHHH---Hhh-----HhHHHHHHHHHHHHhcCHH
Confidence            100  0    0012356899999976433  2346999999999999999   999     9999999999999999999


Q ss_pred             HHHHHHHHHHHhhCC--------------------CCccccccCCCChhHHHHHHHhhhcCCCCCcCcccccCcccc-cC
Q 035745          338 VMKKVQEELAQVVGM--------------------DSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQSSSI-GG  396 (503)
Q Consensus       338 ~~~klr~Ei~~~~~~--------------------~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~l-~g  396 (503)
                      +|+|||+||+++++.                    ++.++++++++||||+|||+||||++|+.....|.+.+|.++ +|
T Consensus       325 vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G  404 (516)
T PLN03195        325 VAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDG  404 (516)
T ss_pred             HHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCC
Confidence            999999999988642                    235788899999999999999999999544466777777665 99


Q ss_pred             eeeCCCCEEEEehhhhccCCCCC-CCCCCCCCCCccCCC-------------CCCccccccHHHHHHHHHHHHHHHHHhc
Q 035745          397 YTVPKDTTIILNVWAIHRDPQIW-DNPLEFGPEKFLNDG-------------IASKFDYSGIALAERMLMFVLASLLHSF  462 (503)
Q Consensus       397 ~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~~-------------~~~~~~~~G~~lA~~e~~~~la~ll~~f  462 (503)
                      |.|||||.|.++++++||||++| +||++|+||||++.+             +.|++.|+|++||++|+++++|.|+++|
T Consensus       405 ~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f  484 (516)
T PLN03195        405 TKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFF  484 (516)
T ss_pred             cEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999 999999999998521             4488899999999999999999999999


Q ss_pred             cccCCCCCCCCCCccccceeeccCceeEeeccCC
Q 035745          463 DWKLPAGTKLDLSEKFGILIKKKEPLVAIPTPRL  496 (503)
Q Consensus       463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~  496 (503)
                      ++++.++.+.  ......++.|+.++.|++++|.
T Consensus       485 ~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        485 KFQLVPGHPV--KYRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             eeEecCCCcc--eeeeeeEEecCCCEEEEEEeCC
Confidence            9998766433  2234456778889999999884


No 24 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=4.8e-64  Score=507.53  Aligned_cols=439  Identities=23%  Similarity=0.359  Sum_probs=331.6

Q ss_pred             ccccccCCCChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCCcccccccccCCCceEeCCCC
Q 035745           33 GYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLVASFGGNDILFSNYG  112 (503)
Q Consensus        33 G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~g  112 (503)
                      |++..+.++.++..+.+++++|||||++++|+.++++|+||+.+++|+.++...|.++.....  .....+.++ +..+|
T Consensus       143 G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~--~~~~~g~~l-~~~dg  219 (633)
T PLN02738        143 GSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEI--LEFVMGKGL-IPADG  219 (633)
T ss_pred             CcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHH--HhhccCCce-ecCCc
Confidence            444555566789999999999999999999998999999999999999877666765432111  111224444 45679


Q ss_pred             hhHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHHHHHHHHHhhhhhhhhhhccc
Q 035745          113 PEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREKGI  192 (503)
Q Consensus       113 ~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~  192 (503)
                      +.|+.+|+.++ +.|+...+..+.+.+.+.++.+++++.....  .++++|+.+.+..+++|+|+.++||.+++..... 
T Consensus       220 e~wr~rRr~l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~--~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~-  295 (633)
T PLN02738        220 EIWRVRRRAIV-PALHQKYVAAMISLFGQASDRLCQKLDAAAS--DGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSND-  295 (633)
T ss_pred             HHHHHHHHhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCcEeHHHHHHHHHHHHHHHHHhCCCccccccc-
Confidence            99999999997 9999999999999999999999999976543  5678999999999999999999999988753321 


Q ss_pred             cchhHHHHHHHHHHHHHhCCCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCCCCC
Q 035745          193 SNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVSVVEGEGGAGNNIEGR  272 (503)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  272 (503)
                      .+....+...+...............+|.+..+  .+..++..+..+.+.+++...++..++..+......... .....
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l--~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~-~~~~~  372 (633)
T PLN02738        296 TGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDI--SPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEE-YMNER  372 (633)
T ss_pred             hHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhh--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhc-ccccc
Confidence            011222222222221111111011112222222  122344555556666666666655443221101000000 00123


Q ss_pred             chhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhCC
Q 035745          273 NKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPRVMKKVQEELAQVVGM  352 (503)
Q Consensus       273 ~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L~~~P~~~~klr~Ei~~~~~~  352 (503)
                      ..|+++.|++..      ..++++++.+++..+++   ||+     |||+++|+|++++|++||++|+|||+||+++++ 
T Consensus       373 ~~dil~~Ll~~~------~~ls~~~L~~e~~~ll~---AG~-----eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-  437 (633)
T PLN02738        373 DPSILHFLLASG------DDVSSKQLRDDLMTMLI---AGH-----ETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-  437 (633)
T ss_pred             cchHHHHHHHcC------CCCCHHHHHHHHHHHHh---cCC-----ccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-
Confidence            468999998742      34899999999999999   999     999999999999999999999999999999987 


Q ss_pred             CCccccccCCCChhHHHHHHHhhhcCCCCCcCcccccCcccccCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCccC
Q 035745          353 DSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLN  432 (503)
Q Consensus       353 ~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~  432 (503)
                      +..++.+++++||||+|||+|+|||+|+...+.|.+.+|++++||.|||||.|.++.+.+||||++||||++|+||||+.
T Consensus       438 ~~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~  517 (633)
T PLN02738        438 DRFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPL  517 (633)
T ss_pred             CCCCCHHHHccCHHHHHHHHHHHhcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCC
Confidence            46678999999999999999999999954447799999999999999999999999999999999999999999999983


Q ss_pred             CC---------------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCccccceeeccCceeEeeccCCC
Q 035745          433 DG---------------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKFGILIKKKEPLVAIPTPRLP  497 (503)
Q Consensus       433 ~~---------------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~~  497 (503)
                      .+               +.|++.|+|++||++|+++++|.|+++|+|++.++.+ ++....+.++.|+.++.+++++|.+
T Consensus       518 ~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~-~~~~~~~~~~~p~~~l~v~l~~R~~  596 (633)
T PLN02738        518 DGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP-PVKMTTGATIHTTEGLKMTVTRRTK  596 (633)
T ss_pred             CCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC-CcccccceEEeeCCCcEEEEEECCC
Confidence            21               3478899999999999999999999999999877642 3333346678888899999999974


No 25 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.2e-63  Score=497.66  Aligned_cols=442  Identities=18%  Similarity=0.264  Sum_probs=330.8

Q ss_pred             CCCCCCCCCCCccccccccCCC--ChHHHHHHHHhhhCCcEE---EecCCeeEEEeCCHHHHHHHHHhcccccccCCCcc
Q 035745           20 AKLPPGPRGLPVIGYLPFLGTT--DLHKTFTELAGAYGPIFK---LWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPI   94 (503)
Q Consensus        20 ~~~ppgp~~~p~~G~~~~~~~~--~~~~~~~~~~~kyG~v~~---~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~~   94 (503)
                      ....|||+++|++|++..+.+.  ..+.++.+...+||..++   .++|+.++++|+||+++++|+.++...|.++....
T Consensus        30 ~~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~  109 (500)
T PLN02169         30 PHGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFK  109 (500)
T ss_pred             cCCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHH
Confidence            4468999999999998766422  244555555555887665   67899999999999999999988766676653221


Q ss_pred             cccccccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHHH--HHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHH
Q 035745           95 AGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDAC--YALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTF  172 (503)
Q Consensus        95 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~--~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~  172 (503)
                        ......|.+++++ +|+.|+++||+++ +.|+...+..+  .+.+.+.++.+++.+.+...  .+..+|+.+.+..++
T Consensus       110 --~~~~~~g~gl~~~-~g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~~t  183 (500)
T PLN02169        110 --KIFDVLGEGILTV-DFELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAH--ENIIIDLQDVFMRFM  183 (500)
T ss_pred             --HHHHhhcCccccc-CcHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCeEeHHHHHHHHH
Confidence              1122235665555 6999999999997 99998877643  36666777888888765433  456799999999999


Q ss_pred             HHHHHHHhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCCccccccccccc----ccccchHHHHHHHHHHHHHHHHHH
Q 035745          173 VCVIQNMLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLSW----LDIQGIEKRTKKISLCFENFIDSA  248 (503)
Q Consensus       173 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~----~~~~~~~~~~~~~~~~~~~~~~~~  248 (503)
                      +++++.++||.+.+..+..  .....+.+.+........   ...+.|++.+    +...+..++..++.+.+.+++.+.
T Consensus       184 ~dvi~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (500)
T PLN02169        184 FDTSSILMTGYDPMSLSIE--MLEVEFGEAADIGEEAIY---YRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKI  258 (500)
T ss_pred             HHHHHhheeCCCccccCCC--CCCCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHH
Confidence            9999999999987543321  111223333332221111   1112232111    112334577788889999999999


Q ss_pred             HHHHHhhhhhhccCCCCCCCCCCCchhHHHHHHHhhhcc-CCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHH
Q 035745          249 VEQYRNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENE-DSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEW  327 (503)
Q Consensus       249 i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~  327 (503)
                      ++++++...  + ++    +.+....|+++.+++...++ ..+..++++++.+++.++++   ||+     |||+++++|
T Consensus       259 I~~r~~~~~--~-~~----~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~---AG~-----dTTa~tl~w  323 (500)
T PLN02169        259 ISSRRKEEI--S-RA----ETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVL---AGR-----DTTSSALTW  323 (500)
T ss_pred             HHHHHHHhh--c-cc----cccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHH---hch-----hHHHHHHHH
Confidence            988765421  0 00    00112468999999864321 01234788999999999999   999     999999999


Q ss_pred             HHHHHhhCcHHHHHHHHHHHHhhCCCCccccccCCCChhHHHHHHHhhhcCCCCCcCcccccCcccc-cCeeeCCCCEEE
Q 035745          328 TMTELMHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQSSSI-GGYTVPKDTTII  406 (503)
Q Consensus       328 ~l~~L~~~P~~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~l-~g~~ip~G~~v~  406 (503)
                      ++++|++||++|+||++||++++      +.+++++||||+|||+||||++|+...+.|.+.+|.++ +||.|||||.|.
T Consensus       324 ~l~~La~~Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~  397 (500)
T PLN02169        324 FFWLLSKHPQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIV  397 (500)
T ss_pred             HHHHHHCCHHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEE
Confidence            99999999999999999999874      56899999999999999999999544566877776554 999999999999


Q ss_pred             EehhhhccCCCCC-CCCCCCCCCCccCCC--------------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCCC
Q 035745          407 LNVWAIHRDPQIW-DNPLEFGPEKFLNDG--------------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTK  471 (503)
Q Consensus       407 ~~~~~~~~d~~~~-~dp~~F~P~R~l~~~--------------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~  471 (503)
                      ++++++||||++| +||++|+||||++++              +.|++.|+|++||++|+++++|+|+++|+++++++.+
T Consensus       398 i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~  477 (500)
T PLN02169        398 ICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHK  477 (500)
T ss_pred             EcHHHhhCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCC
Confidence            9999999999999 899999999998531              3478889999999999999999999999999876543


Q ss_pred             CCCCccccceeeccCceeEeeccC
Q 035745          472 LDLSEKFGILIKKKEPLVAIPTPR  495 (503)
Q Consensus       472 ~~~~~~~~~~~~~~~~~~v~~~~R  495 (503)
                      +  ....+++++|+.++.+++++|
T Consensus       478 ~--~~~~~~~l~~~~gl~l~l~~~  499 (500)
T PLN02169        478 I--EAIPSILLRMKHGLKVTVTKK  499 (500)
T ss_pred             c--ccccceEEecCCCEEEEEEeC
Confidence            3  334567888999999999987


No 26 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=8.1e-63  Score=495.59  Aligned_cols=431  Identities=22%  Similarity=0.313  Sum_probs=336.1

Q ss_pred             CCCCCCCCCCCCCccccccccC----CCChHHHHHHHHhhhCC--cEEEecCCeeEEEeCCHHHHHHHHHhcccccccCC
Q 035745           18 ANAKLPPGPRGLPVIGYLPFLG----TTDLHKTFTELAGAYGP--IFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRD   91 (503)
Q Consensus        18 ~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~--v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~   91 (503)
                      .+.+.||||+++|++|+++.+.    ..+++.++.+++++||+  +|++++++.+.|+++||+++++|+.++ +.|.++.
T Consensus        39 ~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~  117 (490)
T PLN02302         39 GQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGW  117 (490)
T ss_pred             CCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCC
Confidence            3567899999999999987653    34789999999999997  799999999999999999999999876 4565443


Q ss_pred             CcccccccccCCCceEeCCCChhHHHHHHHHHhhcC-ChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHH
Q 035745           92 PPIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLM-SNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSIS  170 (503)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f-~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~  170 (503)
                      ......  .. |.+.+...+|+.|+++|+.++ +.| ++++++.+.+.+.+.++++++.+..      ++.+|+.+++..
T Consensus       118 ~~~~~~--~~-g~~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~~------~~~v~~~~~~~~  187 (490)
T PLN02302        118 PESTVE--LI-GRKSFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWSK------MGEIEFLTELRK  187 (490)
T ss_pred             chhHHH--Hh-ccccccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhcC------CCCEehHHHHHH
Confidence            221111  12 334455567999999999998 666 5788999999999999999998852      235899999999


Q ss_pred             HHHHHHHHHhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCCcccccccccccccccchHHHHHHHHHHHHHHHHHHHH
Q 035745          171 TFVCVIQNMLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVE  250 (503)
Q Consensus       171 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~  250 (503)
                      ++++++++++||.+.+...       ..+...+.........  ....+|..       ..++..++.+.+.+++.+.++
T Consensus       188 ~~~~vi~~~~~G~~~~~~~-------~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~l~~~~~~~i~  251 (490)
T PLN02302        188 LTFKIIMYIFLSSESELVM-------EALEREYTTLNYGVRA--MAINLPGF-------AYHRALKARKKLVALFQSIVD  251 (490)
T ss_pred             HHHHHHHHHHcCCCChHHH-------HHHHHHHHHHHHHhhh--CCcCCCch-------hhHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998765332       1222222211111100  11111211       123444566778888888888


Q ss_pred             HHHhhhhhhccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHH
Q 035745          251 QYRNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMT  330 (503)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~  330 (503)
                      ++++....         +......|+++.|++..++  ++..++++++.+.+..+++   ||+     |||+++++|+++
T Consensus       252 ~~~~~~~~---------~~~~~~~d~l~~ll~~~~~--~~~~~~~~~i~~~~~~~~~---Ag~-----dtta~~l~~~l~  312 (490)
T PLN02302        252 ERRNSRKQ---------NISPRKKDMLDLLLDAEDE--NGRKLDDEEIIDLLLMYLN---AGH-----ESSGHLTMWATI  312 (490)
T ss_pred             HHHHhhhc---------cCCCCcCCHHHHHHhhhcc--CCCCCCHHHHHHHHHHHHH---hhH-----HHHHHHHHHHHH
Confidence            87654311         0012457899999987543  2345899999999999888   999     999999999999


Q ss_pred             HHhhCcHHHHHHHHHHHHhhCCC----CccccccCCCChhHHHHHHHhhhcCCCCCcCcccccCcccccCeeeCCCCEEE
Q 035745          331 ELMHNPRVMKKVQEELAQVVGMD----SCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTII  406 (503)
Q Consensus       331 ~L~~~P~~~~klr~Ei~~~~~~~----~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~  406 (503)
                      +|++||++|+||++|++++.+..    ..++.+++++||||+|||+|+||++|+....+|.+.+|++++||.||||+.|.
T Consensus       313 ~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~  392 (490)
T PLN02302        313 FLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVL  392 (490)
T ss_pred             HHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEE
Confidence            99999999999999999998632    13688899999999999999999999544467999999999999999999999


Q ss_pred             EehhhhccCCCCCCCCCCCCCCCccCCC---------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCcc
Q 035745          407 LNVWAIHRDPQIWDNPLEFGPEKFLNDG---------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEK  477 (503)
Q Consensus       407 ~~~~~~~~d~~~~~dp~~F~P~R~l~~~---------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~  477 (503)
                      ++.+++|+||++|+||++|+||||++..         +.|++.|+|++||.+|++++++.|+++|++++.++. ..+.  
T Consensus       393 ~~~~~~~rd~~~~~dP~~F~PeR~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~--  469 (490)
T PLN02302        393 AWFRQVHMDPEVYPNPKEFDPSRWDNYTPKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG-CKVM--  469 (490)
T ss_pred             eeHHHhcCCcccCCCccccChhhcCCCCCCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC-Ccce--
Confidence            9999999999999999999999998532         458899999999999999999999999999987542 1222  


Q ss_pred             ccceeeccCceeEeeccCCC
Q 035745          478 FGILIKKKEPLVAIPTPRLP  497 (503)
Q Consensus       478 ~~~~~~~~~~~~v~~~~R~~  497 (503)
                      ......|..++.+++++|..
T Consensus       470 ~~~~~~p~~~~~~~~~~~~~  489 (490)
T PLN02302        470 YLPHPRPKDNCLARITKVAS  489 (490)
T ss_pred             eCCCCCCCCCceEEEEeccC
Confidence            22336788899999998864


No 27 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=3.2e-62  Score=482.92  Aligned_cols=428  Identities=19%  Similarity=0.268  Sum_probs=328.5

Q ss_pred             hhccCCCCCCCCCCCCCccccccccC----CCChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhccccccc
Q 035745           14 KSRKANAKLPPGPRGLPVIGYLPFLG----TTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFAN   89 (503)
Q Consensus        14 ~~~~~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~   89 (503)
                      +...++.+.||||.++|++|+++.+.    ..+++.++.+++++||++|+++++++++++++||+++++++.++...|.+
T Consensus        23 ~~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~  102 (472)
T PLN02987         23 RTRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFEC  102 (472)
T ss_pred             hhccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEe
Confidence            33445667889999999999988762    24688999999999999999999999999999999999999988777755


Q ss_pred             CCCcccccccccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHH
Q 035745           90 RDPPIAGLVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSI  169 (503)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~  169 (503)
                      +........  .++.++++ .+|+.|+++|+.+. .+++.+.++.+..   ..+.++++.....    ..+++|+.+.+.
T Consensus       103 ~~~~~~~~~--lg~~~l~~-~~g~~wr~~R~~~~-~f~~~~~~~~~~~---~~~~~~~~~~~~~----~~~~v~~~~~~~  171 (472)
T PLN02987        103 SYPGSISNL--LGKHSLLL-MKGNLHKKMHSLTM-SFANSSIIKDHLL---LDIDRLIRFNLDS----WSSRVLLMEEAK  171 (472)
T ss_pred             cCcHHHHHH--hCcccccc-cCcHHHHHHHHHHH-HhcChHHHHHHHH---HHHHHHHHHHHHh----hccceehHHHHH
Confidence            432111111  23344544 47999999999975 5555555544331   2233333322211    113689999999


Q ss_pred             HHHHHHHHHHhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCCcccccccccccccccchHHHHHHHHHHHHHHHHHHH
Q 035745          170 STFVCVIQNMLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAV  249 (503)
Q Consensus       170 ~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  249 (503)
                      +++++++++++||.+.+....       .+...+.......    ....+|++     .+..++..++.+.+.+++.+.+
T Consensus       172 ~~t~~vi~~~~fg~~~~~~~~-------~~~~~~~~~~~~~----~~~~~p~l-----~~~~~~~~~~~~~~~~~~~~~i  235 (472)
T PLN02987        172 KITFELTVKQLMSFDPGEWTE-------SLRKEYVLVIEGF----FSVPLPLF-----STTYRRAIQARTKVAEALTLVV  235 (472)
T ss_pred             HHHHHHHHHHHcCCCChHHHH-------HHHHHHHHHHhhh----hcCCCcCC-----CchHHHHHHHHHHHHHHHHHHH
Confidence            999999999999976543221       1212222111111    11223442     1234667788899999999999


Q ss_pred             HHHHhhhhhhccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHH
Q 035745          250 EQYRNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTM  329 (503)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l  329 (503)
                      +++++....         + .....|+++.+++..      .+++++++.+.+..+++   ||+     |||+++++|++
T Consensus       236 ~~r~~~~~~---------~-~~~~~d~l~~ll~~~------~~~~~~ei~~~~~~l~~---Ag~-----~tta~~l~~~l  291 (472)
T PLN02987        236 MKRRKEEEE---------G-AEKKKDMLAALLASD------DGFSDEEIVDFLVALLV---AGY-----ETTSTIMTLAV  291 (472)
T ss_pred             HHHHhhhhc---------c-CcccccHHHHHHhcC------CCCCHHHHHHHHHHHHH---hcc-----chHHHHHHHHH
Confidence            988764311         0 123468999999753      25899999999999999   999     99999999999


Q ss_pred             HHHhhCcHHHHHHHHHHHHhhCC---CCccccccCCCChhHHHHHHHhhhcCCCCCcCcccccCcccccCeeeCCCCEEE
Q 035745          330 TELMHNPRVMKKVQEELAQVVGM---DSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTII  406 (503)
Q Consensus       330 ~~L~~~P~~~~klr~Ei~~~~~~---~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~  406 (503)
                      ++|++||++|+++++|++++.+.   +..++.+++.+||||+||++||||++|+...++|.+.+|++++||.||||+.|+
T Consensus       292 ~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~  371 (472)
T PLN02987        292 KFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVF  371 (472)
T ss_pred             HHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEE
Confidence            99999999999999999998752   345788899999999999999999999555678999999999999999999999


Q ss_pred             EehhhhccCCCCCCCCCCCCCCCccCCC------------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCCCCCC
Q 035745          407 LNVWAIHRDPQIWDNPLEFGPEKFLNDG------------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDL  474 (503)
Q Consensus       407 ~~~~~~~~d~~~~~dp~~F~P~R~l~~~------------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~  474 (503)
                      ++.+++|+||++|+||++|+||||++..            +.|++.|+|++||++|++++++.|+++|++++.++.++. 
T Consensus       372 ~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~-  450 (472)
T PLN02987        372 ASFRAVHLDHEYFKDARTFNPWRWQSNSGTTVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDKLV-  450 (472)
T ss_pred             EehHHhhCCcccCCCccccCcccCCCCCCCCCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCcee-
Confidence            9999999999999999999999998531            458899999999999999999999999999997664322 


Q ss_pred             CccccceeeccCceeEeeccCC
Q 035745          475 SEKFGILIKKKEPLVAIPTPRL  496 (503)
Q Consensus       475 ~~~~~~~~~~~~~~~v~~~~R~  496 (503)
                         ...+++|..++.+++++|.
T Consensus       451 ---~~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        451 ---FFPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             ---ecccccCCCCceEEEEecc
Confidence               2447889889999999985


No 28 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=8.1e-62  Score=484.75  Aligned_cols=448  Identities=22%  Similarity=0.321  Sum_probs=341.4

Q ss_pred             CCCCCCCCCCccccccccC----CCChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCCcccc
Q 035745           21 KLPPGPRGLPVIGYLPFLG----TTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAG   96 (503)
Q Consensus        21 ~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~~~~   96 (503)
                      +.--|..+||++|..+.+.    ...++..+.+++++||++|++++|+.+.++++||+++++|+.+....|.++......
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~   91 (489)
T PLN02936         12 RLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVS   91 (489)
T ss_pred             ccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhh
Confidence            3456788999999765533    467899999999999999999999999999999999999998766677665322111


Q ss_pred             cccccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHHHHH-HHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHHHHH
Q 035745           97 LVASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYA-LRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCV  175 (503)
Q Consensus        97 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~-~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~  175 (503)
                        ....|.+++ ..+|+.|+++|+.++ +.|+..++..+.+ .+.+.++.+++.+.+...  .+.++|+.+++..+++++
T Consensus        92 --~~~~~~~i~-~~~g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~--~g~~vd~~~~~~~~~~dv  165 (489)
T PLN02936         92 --EFLFGSGFA-IAEGELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPVAL--SGEAVNMEAKFSQLTLDV  165 (489)
T ss_pred             --HHHhcCccc-cCCchHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCceeHHHHHHHHHHHH
Confidence              111244444 457999999999997 8899888888755 778889999999876543  456899999999999999


Q ss_pred             HHHHhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCCccccccccccc--c-cccchHHHHHHHHHHHHHHHHHHHHHH
Q 035745          176 IQNMLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLSW--L-DIQGIEKRTKKISLCFENFIDSAVEQY  252 (503)
Q Consensus       176 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~--~-~~~~~~~~~~~~~~~~~~~~~~~i~~~  252 (503)
                      ++.++||.+++..+..     ..+.+.+...+..... .....+|++.+  + ...+..++..++.+.+.+++.+.++++
T Consensus       166 i~~~~fG~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~  239 (489)
T PLN02936        166 IGLSVFNYNFDSLTTD-----SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKC  239 (489)
T ss_pred             HHHHHcCCCccccccC-----cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998764421     1222323222221111 11112332211  0 011234566677888888888888776


Q ss_pred             HhhhhhhccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHH
Q 035745          253 RNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTEL  332 (503)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L  332 (503)
                      ++....................|+++.|+...      ..++++++.+++.++++   ||+     |||+++++|++++|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~------~~~~~~~i~~~~~~~~~---aG~-----dTta~~l~~~l~~L  305 (489)
T PLN02936        240 KEIVEAEGEVIEGEEYVNDSDPSVLRFLLASR------EEVSSVQLRDDLLSMLV---AGH-----ETTGSVLTWTLYLL  305 (489)
T ss_pred             HHHHhhcccccccccccccCchHHHHHHHhcc------ccCCHHHHHHHHHHHHH---HhH-----HHHHHHHHHHHHHH
Confidence            65431101000000000123578999998643      24889999999999999   999     99999999999999


Q ss_pred             hhCcHHHHHHHHHHHHhhCCCCccccccCCCChhHHHHHHHhhhcCC-CCCcCcccccCcccccCeeeCCCCEEEEehhh
Q 035745          333 MHNPRVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHS-VPYLVPRRASQSSSIGGYTVPKDTTIILNVWA  411 (503)
Q Consensus       333 ~~~P~~~~klr~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p-~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~  411 (503)
                      ++||++|+|||+||+++++. ..++++++++||||+|||+||||++| ++...+|.+.+|+.++||.||||+.|+++.++
T Consensus       306 ~~~p~~~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~  384 (489)
T PLN02936        306 SKNPEALRKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYN  384 (489)
T ss_pred             hcCHHHHHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHh
Confidence            99999999999999999874 45788899999999999999999999 56666666677888899999999999999999


Q ss_pred             hccCCCCCCCCCCCCCCCccCCC---------------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCc
Q 035745          412 IHRDPQIWDNPLEFGPEKFLNDG---------------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSE  476 (503)
Q Consensus       412 ~~~d~~~~~dp~~F~P~R~l~~~---------------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~  476 (503)
                      +||||++|+||++|+||||+..+               +.|++.|+|++||++|++++++.|+++|+++++++.++..  
T Consensus       385 ~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~--  462 (489)
T PLN02936        385 IHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVM--  462 (489)
T ss_pred             ccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccce--
Confidence            99999999999999999998421               3477889999999999999999999999999987654332  


Q ss_pred             cccceeeccCceeEeeccCCC
Q 035745          477 KFGILIKKKEPLVAIPTPRLP  497 (503)
Q Consensus       477 ~~~~~~~~~~~~~v~~~~R~~  497 (503)
                      ..+++..|+.++.|++++|.-
T Consensus       463 ~~~~~~~~~~~~~v~~~~R~~  483 (489)
T PLN02936        463 TTGATIHTTNGLYMTVSRRRV  483 (489)
T ss_pred             ecceEEeeCCCeEEEEEeeeC
Confidence            345667788899999998864


No 29 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=5.4e-60  Score=470.67  Aligned_cols=430  Identities=18%  Similarity=0.219  Sum_probs=326.7

Q ss_pred             CCCccccccccCCCChHHHHHHHHhhhC-CcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCCcccccccccCCCce
Q 035745           28 GLPVIGYLPFLGTTDLHKTFTELAGAYG-PIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGLVASFGGNDI  106 (503)
Q Consensus        28 ~~p~~G~~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~~~~~~~~~~~~~~  106 (503)
                      ..++.|++... ..+.+.++..+.++++ .+++++.++.  ++++||+.+++|+..+...|.+...... ......|.++
T Consensus        48 ~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~-~~~~~~g~gi  123 (502)
T PLN02426         48 RAYLTASWAKD-FDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSA-ILGDLLGRGI  123 (502)
T ss_pred             CCCccHHHHHh-cccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHH-HHHHhcCCce
Confidence            35678887664 3457778877888887 6788876664  8999999999999887666765432211 1112235554


Q ss_pred             EeCCCChhHHHHHHHHHhhcCChhhHHHHH--HHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHHHHHHHHHhhhhh
Q 035745          107 LFSNYGPEWRKLRKLFMGKLMSNASLDACY--ALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEA  184 (503)
Q Consensus       107 ~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~--~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~  184 (503)
                       ++.+|+.|+++||.++ +.|+.++++.+.  +.+.+..+.+++.+.+..+...+.++|+.++++.+++|+++.++||.+
T Consensus       124 -~~~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~  201 (502)
T PLN02426        124 -FNVDGDSWRFQRKMAS-LELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLD  201 (502)
T ss_pred             -eecCcHHHHHHHHHhH-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCC
Confidence             5567999999999997 999999888764  567777778888876543221346799999999999999999999998


Q ss_pred             hhhhhccccchhHHHHHHHHHHHHHhCCCcccccccccc----cccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 035745          185 LELREKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLS----WLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVSVVE  260 (503)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  260 (503)
                      ++..+..  .....+.+.+.......... .....|++.    ++ ..+..++..++.+.+.+++...++++++..    
T Consensus       202 ~~~l~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~----  273 (502)
T PLN02426        202 PGCLELS--LPISEFADAFDTASKLSAER-AMAASPLLWKIKRLL-NIGSERKLKEAIKLVDELAAEVIRQRRKLG----  273 (502)
T ss_pred             CcccCCC--CCccHHHHHHHHHHHHHHHH-HhcchhHHHHHHHhc-ccchhHHHHHHHHHHHHHHHHHHHHHHhcc----
Confidence            8755421  11123333333332211100 011122221    22 123346677788889999999998876531    


Q ss_pred             cCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHHhhCcHHHH
Q 035745          261 GEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPRVMK  340 (503)
Q Consensus       261 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L~~~P~~~~  340 (503)
                               .....|+++.+++..        .+++++.+++.++++   ||+     |||+++++|++++|++||++|+
T Consensus       274 ---------~~~~~dll~~ll~~~--------~~~~~l~~~~~~~l~---AG~-----dTta~~l~~~l~~L~~~P~v~~  328 (502)
T PLN02426        274 ---------FSASKDLLSRFMASI--------NDDKYLRDIVVSFLL---AGR-----DTVASALTSFFWLLSKHPEVAS  328 (502)
T ss_pred             ---------cCCcchHHHHHHhcC--------CCHHHHHHHHHHHHH---hcc-----chHHHHHHHHHHHHhcCHHHHH
Confidence                     123569999999743        257889999999888   999     9999999999999999999999


Q ss_pred             HHHHHHHHhhCCC-CccccccCCCChhHHHHHHHhhhcCCCCCcCcccccCcccc-cCeeeCCCCEEEEehhhhccCCCC
Q 035745          341 KVQEELAQVVGMD-SCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQSSSI-GGYTVPKDTTIILNVWAIHRDPQI  418 (503)
Q Consensus       341 klr~Ei~~~~~~~-~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d~~~  418 (503)
                      ||++||+++.+.+ ..++++++++||||+|||+||||++|+.....|.+.+|.++ +|+.|||||.|.++.+++||||++
T Consensus       329 kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~  408 (502)
T PLN02426        329 AIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERI  408 (502)
T ss_pred             HHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccc
Confidence            9999999998753 36789999999999999999999999444466999998887 999999999999999999999999


Q ss_pred             C-CCCCCCCCCCccCCC-------------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCccccceeec
Q 035745          419 W-DNPLEFGPEKFLNDG-------------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKFGILIKK  484 (503)
Q Consensus       419 ~-~dp~~F~P~R~l~~~-------------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  484 (503)
                      | +||++|+||||++++             +.|++.|+|++||++|++++++.|+++|+++++++.........+++.+|
T Consensus       409 ~G~dp~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  488 (502)
T PLN02426        409 WGPDCLEFKPERWLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATV  488 (502)
T ss_pred             cCcChhhcCccccCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEec
Confidence            9 999999999998632             34788899999999999999999999999998654222223345678899


Q ss_pred             cCceeEeeccCC
Q 035745          485 KEPLVAIPTPRL  496 (503)
Q Consensus       485 ~~~~~v~~~~R~  496 (503)
                      +.++.|++++|.
T Consensus       489 ~~gl~v~~~~r~  500 (502)
T PLN02426        489 RGGLPVRVRERV  500 (502)
T ss_pred             CCCEEEEEEEcc
Confidence            999999999885


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.4e-60  Score=431.41  Aligned_cols=434  Identities=20%  Similarity=0.314  Sum_probs=346.3

Q ss_pred             CCCCCCCCC-CCCccccccccCCCChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhcccccccCCCccccc
Q 035745           19 NAKLPPGPR-GLPVIGYLPFLGTTDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDITFANRDPPIAGL   97 (503)
Q Consensus        19 ~~~~ppgp~-~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~f~~~~~~~~~~   97 (503)
                      +.+.||.-. ++|++|++..+ ++++..+++++++|||+||++.++|+.+.++.+|+....++++....++... .....
T Consensus        29 ~~~~PPli~gwiP~lG~a~~f-gk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~-~~~~l  106 (486)
T KOG0684|consen   29 SRKEPPLIKGWIPWLGSALAF-GKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEE-AYSKL  106 (486)
T ss_pred             CCCCCcccccCcchhhHHHHh-ccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHH-HHHHh
Confidence            446888865 48999999999 7899999999999999999999999999999999999999987633332211 11112


Q ss_pred             ccccCCCceEeCCCChhHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHH-HHHhhccCCCcccchhhhHHHHHHHHH
Q 035745           98 VASFGGNDILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRD-LYNNNKTGIGKPIDVGELSISTFVCVI  176 (503)
Q Consensus        98 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~-l~~~~~~~~~~~~d~~~~~~~~~~~~i  176 (503)
                      .....|.|++...+......+.+.+. ..+....++++.+.|.+++++.+.. +.+     .+..-.+.+....+++.+.
T Consensus       107 ~~~vFg~~v~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~~el~~~f~~~~~~-----s~~~d~l~~~~~~ii~tAs  180 (486)
T KOG0684|consen  107 TTPVFGKGVVYDVPNHVMMEQKKFFK-SALGGVALKSLVELMLEELHAYFETSLGE-----SGETDGLYTFCRLIIFTAS  180 (486)
T ss_pred             hhhhcCCCccccCCCchHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHhccccc-----ccchhHhhhhhHHHhhhhH
Confidence            22233677887777777777777775 7888999999999999999988887 332     4445556677777777777


Q ss_pred             HHHhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 035745          177 QNMLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKV  256 (503)
Q Consensus       177 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  256 (503)
                      -.++||+.....+.       .....+.++...+  ..+...||.  +++. ...|+..++.+.+.+.....+.++++..
T Consensus       181 ~~ll~~e~r~~~d~-------~~a~l~~dLd~~F--~~~d~~FP~--~LP~-~~~r~~~ra~~~i~k~f~~~i~~rr~s~  248 (486)
T KOG0684|consen  181 RLLLGGEVRDQLDA-------DVAKLYHDLDQGF--QPFDFLFPY--NLPI-PLLRRRDRARKKISKIFSKIILDRRASI  248 (486)
T ss_pred             HHhhhhhhhhhhcc-------hHHHHHHHHhccc--cchHhhccc--CCCc-chhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence            77777777665432       1222223322211  123445664  3322 3346666889999999999999888764


Q ss_pred             hhhccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHHhhCc
Q 035745          257 SVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNP  336 (503)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L~~~P  336 (503)
                                   +....|+++.+++...   ++.+.+++|+...++.+++   ||+     .||+.|.+|++++|++||
T Consensus       249 -------------s~~~~dmlq~l~~~y~---dg~~~te~e~a~~li~~Lw---A~Q-----~ns~ptsfW~l~yLl~~P  304 (486)
T KOG0684|consen  249 -------------SKWDNDMLQSLMEKYK---DGRPTTEEEIAGLLIGLLW---AGQ-----HNSSPTSFWTLAYLLRHP  304 (486)
T ss_pred             -------------ccccHHHHHHHHHHhh---cCCcCcHHHHHHHHHHHHH---hcc-----ccccHHHHHHHHHHhhCH
Confidence                         3466799999998332   3568999999999999999   999     999999999999999999


Q ss_pred             HHHHHHHHHHHHhhCCCCc-cccccCCCChhHHHHHHHhhhcCCCCCcCcccccCcccccC----eeeCCCCEEEEehhh
Q 035745          337 RVMKKVQEELAQVVGMDSC-VEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQSSSIGG----YTVPKDTTIILNVWA  411 (503)
Q Consensus       337 ~~~~klr~Ei~~~~~~~~~-~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~l~g----~~ip~G~~v~~~~~~  411 (503)
                      |+++.+++|+..++|+... ++.+.|++||.|+.||+|||||+|+...+.|.+.+|.++.+    |.||+|..|.+++..
T Consensus       305 e~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~  384 (486)
T KOG0684|consen  305 EAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFL  384 (486)
T ss_pred             HHHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEecccc
Confidence            9999999999999987554 89999999999999999999999966668899999999965    999999999999999


Q ss_pred             hccCCCCCCCCCCCCCCCccCCC-----------------CCCccccccHHHHHHHHHHHHHHHHHhccccCCCCCCCCC
Q 035745          412 IHRDPQIWDNPLEFGPEKFLNDG-----------------IASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDL  474 (503)
Q Consensus       412 ~~~d~~~~~dp~~F~P~R~l~~~-----------------~~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~  474 (503)
                      +|+||++|+||+.|+|+||++++                 |+|.+.|||+.||.+|++.++..+|+.||+++.+|.-+.+
T Consensus       385 ~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~  464 (486)
T KOG0684|consen  385 LHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEV  464 (486)
T ss_pred             ccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCC
Confidence            99999999999999999999653                 4577889999999999999999999999999998733333


Q ss_pred             CccccceeeccCceeEeeccCCC
Q 035745          475 SEKFGILIKKKEPLVAIPTPRLP  497 (503)
Q Consensus       475 ~~~~~~~~~~~~~~~v~~~~R~~  497 (503)
                      +. ...+..|.++++|+.++|+.
T Consensus       465 d~-s~~v~~P~g~v~irYK~R~~  486 (486)
T KOG0684|consen  465 DY-SRMVMQPEGDVRIRYKRRPL  486 (486)
T ss_pred             CH-HHhhcCCCCCceEEEeecCC
Confidence            32 34478899999999999863


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=7.7e-56  Score=433.98  Aligned_cols=400  Identities=16%  Similarity=0.176  Sum_probs=290.2

Q ss_pred             CCCCCCCCCCCCCccccccccC----CCChHHHHHHHHhhhCC-cEEEecCCeeE-------EEeCCHHHHHHHHHh---
Q 035745           18 ANAKLPPGPRGLPVIGYLPFLG----TTDLHKTFTELAGAYGP-IFKLWLGNKLC-------VVVSSPSLVKQVVRD---   82 (503)
Q Consensus        18 ~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------v~v~~p~~i~~i~~~---   82 (503)
                      .+.+.|||+.++|++|++..+.    ..++..++.+.++|||+ ||+++++|.+.       |+++||++++.+|.+   
T Consensus        14 ~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~   93 (480)
T PLN02648         14 LPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV   93 (480)
T ss_pred             CCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence            3677899999999999987542    35668999999999998 99999998665       999999999999975   


Q ss_pred             -cccccccCCCcccccccccCCCc---eEeCCCChhHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 035745           83 -QDITFANRDPPIAGLVASFGGND---ILFSNYGPEWRKLRKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGI  158 (503)
Q Consensus        83 -~~~~f~~~~~~~~~~~~~~~~~~---~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~  158 (503)
                       +...|...+.... .   ..|.+   .++..+|+.|+++|+++. +.|+ ..++.+.+.|.+.++++++.|.....  .
T Consensus        94 ~~~~~~~~~~~~~~-~---l~G~~~~~s~~~~~g~~H~r~Rrll~-~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~--~  165 (480)
T PLN02648         94 DKRDVFTGTYMPST-A---FTGGYRVLSYLDPSEPKHAKLKSFLF-ELLK-SRHRRFIPEFRAAFAELFDTWEAELA--K  165 (480)
T ss_pred             cccccceeeeccCc-c---ccCCceeeeecCCCCchHHHHHHHHH-HHHH-HhhhhhhhHHHHHHHHHHHHHHHHHh--h
Confidence             4444554333222 1   22433   556677999999999997 8888 57789999999999999999965322  4


Q ss_pred             CcccchhhhHHHHHHHHHHHHhhhhhhhhhhccccchhHHHHHHHHHHHHHhCCCccccccc-cccccccc--c-hHHHH
Q 035745          159 GKPIDVGELSISTFVCVIQNMLWGEALELREKGISNLGAEIKFKLAELVVLMGTPNISDIIP-VLSWLDIQ--G-IEKRT  234 (503)
Q Consensus       159 ~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~--~-~~~~~  234 (503)
                      +..+|+.+.+..++++++++++||.+.+...     ....+......+............+| ++..+...  + .....
T Consensus       166 ~~~vdv~~~~~~lt~~vi~~~lfG~~~~~~~-----l~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~i~~~~~~~~~~~  240 (480)
T PLN02648        166 KGKAEFNDPLDQMAFNFLCKALTGKDPSETA-----LGSDGPALIQKWLALQLAPLASTGLPHVLEELLLHTFPLPFFLV  240 (480)
T ss_pred             CCCccccchHHHHHHHHHHHHHcCCCcchhh-----hccchhHHHHHHHHHHhhHHHHcCchHHHHHHhhcccCCchhhh
Confidence            4469999999999999999999998765411     11111111211111000000000001 00000000  0 00000


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCCCCCchhHHHHHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccc
Q 035745          235 KKISLCFENFIDSAVEQYRNKVSVVEGEGGAGNNIEGRNKDFLQLLLELQENEDSASSISTIQLKALLVNFIVIVLTGHN  314 (503)
Q Consensus       235 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~  314 (503)
                      ....+.+.+++                            .+.++.+++...+    .+++++++.++++.  ++.++++ 
T Consensus       241 ~~~~~~~~~~~----------------------------~~~~~~ll~~~~~----~~l~~~ei~~~~l~--~~~~~t~-  285 (480)
T PLN02648        241 KSDYDKLYDFF----------------------------RASATEALDLAEK----FGISREEALHNLLF--VLGFNAF-  285 (480)
T ss_pred             hccHHHHHHHH----------------------------HHHHHHHHHHHHh----cCCCHHHHHHHHHH--HHHHHhh-
Confidence            00000011111                            1122344443332    34999999998863  2223777 


Q ss_pred             cccCCchHHHHHHHHHHHhhCcH-HHHHHHHHHHHhhCC-CCccccccCCCChhHHHHHHHhhhcCCCCCcCcccccCcc
Q 035745          315 FWWNRHTTTTVEWTMTELMHNPR-VMKKVQEELAQVVGM-DSCVEEFHLPKLKYLDAVVKETFRLHSVPYLVPRRASQSS  392 (503)
Q Consensus       315 ~~~~~tt~~~l~~~l~~L~~~P~-~~~klr~Ei~~~~~~-~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~  392 (503)
                          +||+++++|++++|++||+ +|+||++||+.+++. +..++.+++++||||++||+|+||++|+...+.|.+.+|+
T Consensus       286 ----~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~  361 (480)
T PLN02648        286 ----GGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDF  361 (480)
T ss_pred             ----HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCE
Confidence                8888999999999999995 999999999999863 4568999999999999999999999995555678899999


Q ss_pred             ccc----CeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCccCCC-------------------CCCccccccHHHHHH
Q 035745          393 SIG----GYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLNDG-------------------IASKFDYSGIALAER  449 (503)
Q Consensus       393 ~l~----g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~-------------------~~~~~~~~G~~lA~~  449 (503)
                      +++    ||.||||+.|+++.+.+|+||++|+||++|+|+||+++.                   +.|++.|+|++||++
T Consensus       362 ~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~  441 (480)
T PLN02648        362 VIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEKLLKYVFWSNGRETESPTVGNKQCAGKDFVVL  441 (480)
T ss_pred             EEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCccccccccccCCCcccCCCCCCCccCccHHHHHH
Confidence            995    799999999999999999999999999999999998531                   235689999999999


Q ss_pred             HHHHHHHHHHHhcc-ccCCCC
Q 035745          450 MLMFVLASLLHSFD-WKLPAG  469 (503)
Q Consensus       450 e~~~~la~ll~~f~-~~~~~~  469 (503)
                      |++++++.|+++|+ +++.+|
T Consensus       442 e~~~~la~Ll~~f~~~~l~~~  462 (480)
T PLN02648        442 VARLFVAELFLRYDSFEIEVD  462 (480)
T ss_pred             HHHHHHHHHHHHhCEEeecCC
Confidence            99999999999998 998766


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=4.1e-49  Score=382.22  Aligned_cols=380  Identities=26%  Similarity=0.358  Sum_probs=300.6

Q ss_pred             hHHHHHHHHhhhCCcEEEecCCee--EEEeCCHHHHHHHHHhcccccccCCCccccc--ccccCCCceEeCCCChhHHHH
Q 035745           43 LHKTFTELAGAYGPIFKLWLGNKL--CVVVSSPSLVKQVVRDQDITFANRDPPIAGL--VASFGGNDILFSNYGPEWRKL  118 (503)
Q Consensus        43 ~~~~~~~~~~kyG~v~~~~~~~~~--~v~v~~p~~i~~i~~~~~~~f~~~~~~~~~~--~~~~~~~~~~~~~~g~~w~~~  118 (503)
                      +......+.+.||.+++++..+..  +++++++++++++++++. .+.+........  .....|.+.++..||+.|.++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            455666788889999888876654  799999999999998874 222222222111  122335555777789999999


Q ss_pred             HHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHHhhccCCCcccchhhhHHHHHHHHHHHHhhhhhhhhhhccccchhHH
Q 035745          119 RKLFMGKLMSNASLDACYALRKQEVKNIIRDLYNNNKTGIGKPIDVGELSISTFVCVIQNMLWGEALELREKGISNLGAE  198 (503)
Q Consensus       119 R~~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~  198 (503)
                      |++++ +.|+++.++.+.+.|.+.+.++++.+ .     .+..+++.+....++.++|+ .+||.+.+....        
T Consensus       103 Rkl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~-----~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~~--------  166 (411)
T COG2124         103 RKLLA-PAFTPRALRGYRPLIREIADRLLDDL-W-----QGGADLVLDFAAELTLRVIA-ELLGVPLEDRPQ--------  166 (411)
T ss_pred             HHHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-c-----cCCchhHHHHhhhhhHHHHH-HHhCCCHHHHHH--------
Confidence            99997 99999999999999999999999999 3     22678899999999999999 999998776542        


Q ss_pred             HHHHHHHHHHHhCCCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCCCCCchhHHH
Q 035745          199 IKFKLAELVVLMGTPNISDIIPVLSWLDIQGIEKRTKKISLCFENFIDSAVEQYRNKVSVVEGEGGAGNNIEGRNKDFLQ  278 (503)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~  278 (503)
                      .............        |...   .....++..++...+.+++...+++++..                ...|+++
T Consensus       167 ~~~~~~~~~~~~~--------~~~~---~~~~~~~~~~a~~~~~~~~~~li~~rR~~----------------~~~dlls  219 (411)
T COG2124         167 LLRWSDALLLRLD--------PDLG---PEEPWRRARAARRELDAYLRALIAERRAA----------------PRDDLLS  219 (411)
T ss_pred             HHHHHHHHHhccC--------cccC---CcccHHHHHHHHHHHHHHHHHHHHHhccC----------------CcccHHH
Confidence            1122221111100        1111   11224667888999999999999998732                6789999


Q ss_pred             HHHHhhhccCCcCcccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhCCCCcccc
Q 035745          279 LLLELQENEDSASSISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPRVMKKVQEELAQVVGMDSCVEE  358 (503)
Q Consensus       279 ~ll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L~~~P~~~~klr~Ei~~~~~~~~~~~~  358 (503)
                      .|+.+.+++  +..++++|+.++++.+++   ||+     |||+++++|+++.|++||++++++++|.+.          
T Consensus       220 ~l~~a~~~~--~~~lsd~Ei~~~~~~ll~---AGh-----eTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------  279 (411)
T COG2124         220 LLLSAEDDG--GGRLSDDEIRDELITLLV---AGH-----ETTANALAWALYALLRHPDQLAKLRAEPDR----------  279 (411)
T ss_pred             HHHHHhhCC--CCcCCHHHHHHHHHHHHH---hhh-----HHHHHHHHHHHHHHHHCchHHHHHHhCcch----------
Confidence            999988762  226999999999999999   999     999999999999999999999999998774          


Q ss_pred             ccCCCChhHHHHHHHhhhcCCCCCcCcccccCcccccCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCCCccCCC---C
Q 035745          359 FHLPKLKYLDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIILNVWAIHRDPQIWDNPLEFGPEKFLNDG---I  435 (503)
Q Consensus       359 ~~l~~lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~---~  435 (503)
                            ||+.++++|+||++|+...+.|.+.+|++++|+.||||+.|+++++++||||++|+||++|+|+||....   |
T Consensus       280 ------~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~~~~l~FG  353 (411)
T COG2124         280 ------PLLEAVVEETLRLYPPVPLARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFNNAHLPFG  353 (411)
T ss_pred             ------HHHHHHHHHHHHhCCchhccceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCCCCCcCCC
Confidence                  7899999999999995554889999999999999999999999999999999999999999999998432   5


Q ss_pred             CCccccccHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCccccceeeccCceeEeeccC
Q 035745          436 ASKFDYSGIALAERMLMFVLASLLHSFDWKLPAGTKLDLSEKFGILIKKKEPLVAIPTPR  495 (503)
Q Consensus       436 ~~~~~~~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R  495 (503)
                      .|+|.|+|.+||++|++++++.++++|++....+ . . ......+..+..+..+.++.|
T Consensus       354 ~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~-~-~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         354 GGPHRCLGAALARLELKVALAELLRRFPLLLLAE-P-P-PLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             CCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC-C-C-CccccccccCCCcceeeeecC
Confidence            5899999999999999999999999999987665 2 1 122344445556666666654


No 33 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=59.29  E-value=8.8  Score=25.22  Aligned_cols=18  Identities=33%  Similarity=0.632  Sum_probs=15.8

Q ss_pred             HHHHHhhCcHHHHHHHHH
Q 035745          328 TMTELMHNPRVMKKVQEE  345 (503)
Q Consensus       328 ~l~~L~~~P~~~~klr~E  345 (503)
                      ++.||.+||++.++|.+.
T Consensus         5 iV~YLv~nPevl~kl~~g   22 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEG   22 (57)
T ss_pred             HHHHHHHChHHHHHHHcC
Confidence            577999999999999874


No 34 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=50.73  E-value=51  Score=20.89  Aligned_cols=43  Identities=21%  Similarity=0.257  Sum_probs=30.4

Q ss_pred             HHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHHhhCcHHHHHHHHHHH
Q 035745          297 QLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPRVMKKVQEELA  347 (503)
Q Consensus       297 ~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L~~~P~~~~klr~Ei~  347 (503)
                      ++...+.+++-   .|-     |..+-.++--|.+..-||+....+..|++
T Consensus         6 d~l~eiS~lLn---tgL-----d~etL~ici~L~e~GVnPeaLA~vI~elr   48 (48)
T PF12554_consen    6 DVLHEISDLLN---TGL-----DRETLSICIELCENGVNPEALAAVIKELR   48 (48)
T ss_pred             HHHHHHHHHHc---CCC-----CHHHHHHHHHHHHCCCCHHHHHHHHHHhC
Confidence            44555566666   676     76666666667777779999988888763


No 35 
>PRK06789 flagellar motor switch protein; Validated
Probab=45.84  E-value=17  Score=25.44  Aligned_cols=40  Identities=5%  Similarity=0.149  Sum_probs=31.6

Q ss_pred             HHHHHhhhcCC-CCCcCcccccCc--ccccCeeeCCCCEEEEe
Q 035745          369 AVVKETFRLHS-VPYLVPRRASQS--SSIGGYTVPKDTTIILN  408 (503)
Q Consensus       369 a~i~EtlRl~p-~~~~~~R~~~~d--~~l~g~~ip~G~~v~~~  408 (503)
                      .-++|.+.+.+ ....+-|.+.++  +.++|..|.+|..|.++
T Consensus        20 ~~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         20 KKIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             eEHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            34789999998 666677887775  45599999999998775


No 36 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=40.81  E-value=20  Score=30.96  Aligned_cols=43  Identities=28%  Similarity=0.239  Sum_probs=31.0

Q ss_pred             ChhHHHHHHHhhhcCCCCCcCcccccCcccccCeeeCCCCEEEE
Q 035745          364 LKYLDAVVKETFRLHSVPYLVPRRASQSSSIGGYTVPKDTTIIL  407 (503)
Q Consensus       364 lpyl~a~i~EtlRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~  407 (503)
                      -..+.|||.|+.-...- ..+.=+..+|+.++|..|||||.|.-
T Consensus        52 ~n~I~A~V~~~qtv~~G-s~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDG-SRVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCC-CEEEEEEcCceEECCEEeCCCCEEEE
Confidence            34567899998877642 11222457899999999999998754


No 37 
>PF08285 DPM3:  Dolichol-phosphate mannosyltransferase subunit 3 (DPM3);  InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=36.06  E-value=1e+02  Score=22.76  Aligned_cols=48  Identities=13%  Similarity=0.234  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHHhhCcHHHHHHHHHHHHhh
Q 035745          296 IQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPRVMKKVQEELAQVV  350 (503)
Q Consensus       296 ~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L~~~P~~~~klr~Ei~~~~  350 (503)
                      ++++-.+-....+.|+.+       ...++.|-++-.-..||..+.|++||+++-
T Consensus        34 ~~ii~~lP~~~Lv~fG~Y-------sl~~lgy~v~tFnDcpeA~~eL~~eI~eAK   81 (91)
T PF08285_consen   34 QEIIPYLPFYALVSFGCY-------SLFTLGYGVATFNDCPEAAKELQKEIKEAK   81 (91)
T ss_pred             HHHHHHhhHHHHHHHHHH-------HHHHHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence            444444433333344555       666777777777778999999999999874


No 38 
>PF09551 Spore_II_R:  Stage II sporulation protein R (spore_II_R);  InterPro: IPR014202  This entry is designated stage II sporulation protein R. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species. SpoIIR is a signalling protein that links the activation of sigma E to the transcriptional activity of sigma F during sporulation [, ].
Probab=30.78  E-value=51  Score=26.13  Aligned_cols=43  Identities=14%  Similarity=0.193  Sum_probs=26.0

Q ss_pred             CCChhHHHHHHHhhhcCC----CCCcCcccccCcccccCeeeCCCCE
Q 035745          362 PKLKYLDAVVKETFRLHS----VPYLVPRRASQSSSIGGYTVPKDTT  404 (503)
Q Consensus       362 ~~lpyl~a~i~EtlRl~p----~~~~~~R~~~~d~~l~g~~ip~G~~  404 (503)
                      ++++-++.+..++++-..    +...+.+.--..-.+|++++|+|..
T Consensus        52 ~~~~~Ie~~A~~~l~~~G~~y~v~v~~~~~~FPtK~YG~~~~PaG~Y   98 (130)
T PF09551_consen   52 ENLPEIEQIAEEVLAEEGYDYPVKVELGRFYFPTKTYGDIVLPAGEY   98 (130)
T ss_pred             HhHHHHHHHHHHHHHHhCCCCcEEEEEEeeeCCCceECCEeccCCce
Confidence            456666777777776654    2222333333334568999999975


No 39 
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=28.67  E-value=2.6e+02  Score=26.08  Aligned_cols=64  Identities=17%  Similarity=0.172  Sum_probs=47.5

Q ss_pred             cccHHHHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHHhhCcHHHHHHHHHHHHhhCCCCccccccC--CCChhHHH
Q 035745          292 SISTIQLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPRVMKKVQEELAQVVGMDSCVEEFHL--PKLKYLDA  369 (503)
Q Consensus       292 ~l~~~~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L~~~P~~~~klr~Ei~~~~~~~~~~~~~~l--~~lpyl~a  369 (503)
                      +-+.+.|.+++..|-+   .|-                     +|...+.|.++-.-.+-+++.++...|  +++.|+--
T Consensus       342 PGtWDHI~~QiGMFSy---TGL---------------------tp~qV~~li~~h~vyLl~~GRInisGLN~~NveyVAk  397 (410)
T KOG1412|consen  342 PGTWDHITQQIGMFSY---TGL---------------------TPAQVDHLIENHKVYLLSDGRINISGLNMKNVEYVAK  397 (410)
T ss_pred             CCcHHHHHhhccceee---cCC---------------------CHHHHHHHHHhceEEEecCCcEeeeccccccHHHHHH
Confidence            4567888888877666   666                     567777787776555555666666654  68999999


Q ss_pred             HHHHhhhcCC
Q 035745          370 VVKETFRLHS  379 (503)
Q Consensus       370 ~i~EtlRl~p  379 (503)
                      .|.|+.|-.+
T Consensus       398 AIde~Vr~~~  407 (410)
T KOG1412|consen  398 AIDETVRAIK  407 (410)
T ss_pred             HHHHHHHhhc
Confidence            9999999765


No 40 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=28.04  E-value=1e+02  Score=22.34  Aligned_cols=18  Identities=17%  Similarity=0.543  Sum_probs=15.6

Q ss_pred             CcHHHHHHHHHHHHhhCC
Q 035745          335 NPRVMKKVQEELAQVVGM  352 (503)
Q Consensus       335 ~P~~~~klr~Ei~~~~~~  352 (503)
                      .|++...||+||.+|+..
T Consensus        35 ~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          35 QPDYLEQLRKEILEVISK   52 (88)
T ss_pred             CcchHHHHHHHHHHHHHH
Confidence            499999999999999753


No 41 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=26.91  E-value=1.3e+02  Score=23.76  Aligned_cols=41  Identities=15%  Similarity=0.359  Sum_probs=31.9

Q ss_pred             CChHHHHHHHHhhhCCcEEEecCCeeEEEeCCHHHHHHHHHhc
Q 035745           41 TDLHKTFTELAGAYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQ   83 (503)
Q Consensus        41 ~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~i~~i~~~~   83 (503)
                      .+....+.+|.++||.+--.  .+...+...|++.++++..++
T Consensus        74 ~~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   74 QNVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhCh
Confidence            46678899999999987432  245677788999999998765


No 42 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=24.66  E-value=1.3e+02  Score=18.04  Aligned_cols=18  Identities=11%  Similarity=0.388  Sum_probs=11.8

Q ss_pred             HHHHHHh-hCcHHHHHHHH
Q 035745          327 WTMTELM-HNPRVMKKVQE  344 (503)
Q Consensus       327 ~~l~~L~-~~P~~~~klr~  344 (503)
                      .++..++ +||++++.+++
T Consensus        17 ~lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   17 SLLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHHhChhHHHHHHh
Confidence            3333444 79999888765


No 43 
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=23.10  E-value=1e+02  Score=25.40  Aligned_cols=37  Identities=22%  Similarity=0.344  Sum_probs=28.6

Q ss_pred             CCChHHHHHHHHhhhC-CcEEEecCCee----EEEeCCHHHH
Q 035745           40 TTDLHKTFTELAGAYG-PIFKLWLGNKL----CVVVSSPSLV   76 (503)
Q Consensus        40 ~~~~~~~~~~~~~kyG-~v~~~~~~~~~----~v~v~~p~~i   76 (503)
                      +....+..+++++++| ||.++.++|.-    -++++||-..
T Consensus       153 GGkIteaVk~lr~~hgI~VISL~M~GSVpdVADlVvtDPvqA  194 (218)
T COG1707         153 GGKITEAVKELREEHGIPVISLNMFGSVPDVADLVVTDPVQA  194 (218)
T ss_pred             cchHHHHHHHHHHhcCCeEEEeccCCCCcchhheeecCchHh
Confidence            5668889999999999 99999987621    2577777543


No 44 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=23.08  E-value=3.4e+02  Score=20.62  Aligned_cols=41  Identities=22%  Similarity=0.296  Sum_probs=32.2

Q ss_pred             hHHHHHHHHhhhCCcEEEecC------CeeEEEeCCHHHHHHHHHhc
Q 035745           43 LHKTFTELAGAYGPIFKLWLG------NKLCVVVSSPSLVKQVVRDQ   83 (503)
Q Consensus        43 ~~~~~~~~~~kyG~v~~~~~~------~~~~v~v~~p~~i~~i~~~~   83 (503)
                      ...-.-++.-+||+|-.+++|      |+-+||-.|-..++..+.+-
T Consensus        31 TseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dhl   77 (124)
T KOG0114|consen   31 TSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDHL   77 (124)
T ss_pred             cHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHHh
Confidence            455566788889999999988      56778888888888887653


No 45 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=22.56  E-value=3.1e+02  Score=19.88  Aligned_cols=46  Identities=11%  Similarity=0.166  Sum_probs=36.6

Q ss_pred             HHHHHHHHHHHHHhhccccccCCchHHHHHHHHHHHhhCcHHHHHHHHHHHHhh
Q 035745          297 QLKALLVNFIVIVLTGHNFWWNRHTTTTVEWTMTELMHNPRVMKKVQEELAQVV  350 (503)
Q Consensus       297 ~~~~~~~~~~~~~~aG~~~~~~~tt~~~l~~~l~~L~~~P~~~~klr~Ei~~~~  350 (503)
                      .........++   -=+     +.++..+.-.+.+-++||+..+++.+.+.+-+
T Consensus        33 ~~~~~~~~~I~---kKy-----~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   33 DNMIAYYQYIF---KKY-----GIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             HHHHHHHHHHH---HHc-----CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            33333444555   788     99999999999999999999999999987665


No 46 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=22.02  E-value=64  Score=25.33  Aligned_cols=21  Identities=38%  Similarity=0.528  Sum_probs=17.4

Q ss_pred             cccCcccccCeeeCCCCEEEE
Q 035745          387 RASQSSSIGGYTVPKDTTIIL  407 (503)
Q Consensus       387 ~~~~d~~l~g~~ip~G~~v~~  407 (503)
                      .++.|.+++|-+||+|+.|..
T Consensus        72 I~~~d~~~~g~~i~~GtWv~~   92 (122)
T PF14550_consen   72 IAPEDMEIGGETIPKGTWVVG   92 (122)
T ss_pred             ecCCCcccCCeeecceEEEEE
Confidence            456689999999999998854


No 47 
>PRK05933 type III secretion system protein; Validated
Probab=21.32  E-value=76  Score=29.44  Aligned_cols=42  Identities=17%  Similarity=0.130  Sum_probs=32.8

Q ss_pred             HHHHHHHhhhcCC-CCCcCcccc-cC--cccccCeeeCCCCEEEEe
Q 035745          367 LDAVVKETFRLHS-VPYLVPRRA-SQ--SSSIGGYTVPKDTTIILN  408 (503)
Q Consensus       367 l~a~i~EtlRl~p-~~~~~~R~~-~~--d~~l~g~~ip~G~~v~~~  408 (503)
                      ...-|+|.|+|.+ ....+-|.+ .+  |+.++|..|.+|.+|.++
T Consensus       317 T~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd  362 (372)
T PRK05933        317 YSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG  362 (372)
T ss_pred             ccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence            3677999999999 555565664 34  567799999999999875


No 48 
>PRK13467 F0F1 ATP synthase subunit C; Provisional
Probab=20.10  E-value=1.4e+02  Score=20.46  Aligned_cols=24  Identities=4%  Similarity=0.094  Sum_probs=19.7

Q ss_pred             HHHHHHHHHHHhhCcHHHHHHHHH
Q 035745          322 TTTVEWTMTELMHNPRVMKKVQEE  345 (503)
Q Consensus       322 ~~~l~~~l~~L~~~P~~~~klr~E  345 (503)
                      ....+-++--+++|||.+.+++.-
T Consensus        20 G~v~~~a~e~iaRqPE~~~~i~~~   43 (66)
T PRK13467         20 GFLMANLFKSAARQPEMIGQLRSL   43 (66)
T ss_pred             HHHHHHHHHHHHcChhHHHhHHHH
Confidence            455667788899999999999875


Done!